APECO1_RS02910 467b19396b12d832a181ce678009b112 701 PANTHER PTHR30252:SF2 5 696 0.0 T 22-04-2016 APECO1_RS02910 467b19396b12d832a181ce678009b112 701 Pfam PF02554 Carbon starvation protein CstA 32 403 3.3E-168 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 APECO1_RS02910 467b19396b12d832a181ce678009b112 701 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 596 4.5E-35 T 22-04-2016 IPR025299 CstA, C-terminal domain APECO1_RS02910 467b19396b12d832a181ce678009b112 701 PANTHER PTHR30252 5 696 0.0 T 22-04-2016 APECO1_RS26685 127c598fcd399218ca088351fcd09845 105 Gene3D G3DSA:3.30.360.10 2 88 1.8E-20 T 22-04-2016 APECO1_RS26685 127c598fcd399218ca088351fcd09845 105 PANTHER PTHR21499:SF33 17 105 1.0E-16 T 22-04-2016 APECO1_RS26685 127c598fcd399218ca088351fcd09845 105 SUPERFAMILY SSF55347 4 94 7.19E-16 T 22-04-2016 APECO1_RS26685 127c598fcd399218ca088351fcd09845 105 Pfam PF00742 Homoserine dehydrogenase 19 105 4.9E-17 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS26685 127c598fcd399218ca088351fcd09845 105 PANTHER PTHR21499 17 105 1.0E-16 T 22-04-2016 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 PANTHER PTHR21091:SF18 8 234 3.6E-96 T 22-04-2016 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 PIRSF PIRSF005917 1 287 1.0E-108 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 2.2E-29 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 PANTHER PTHR21091 8 234 3.6E-96 T 22-04-2016 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 4.5E-117 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.785 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 Gene3D G3DSA:3.40.1010.10 12 120 8.2E-17 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 Gene3D G3DSA:3.30.950.10 121 236 4.7E-43 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APECO1_RS18175 7f0ba7e39ea56468ebd8591a746860b4 287 SUPERFAMILY SSF53790 12 232 1.2E-84 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APECO1_RS19900 08769bc8e51f1ccb39ea0923d6873b1a 349 Pfam PF01594 Domain of unknown function DUF20 14 328 5.5E-82 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APECO1_RS19900 08769bc8e51f1ccb39ea0923d6873b1a 349 PANTHER PTHR21716 14 348 2.6E-206 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APECO1_RS19900 08769bc8e51f1ccb39ea0923d6873b1a 349 PANTHER PTHR21716:SF17 14 348 2.6E-206 T 22-04-2016 APECO1_RS24755 97c0244514442307779842dfb057e969 254 PANTHER PTHR24322:SF513 14 142 1.0E-53 T 22-04-2016 APECO1_RS24755 97c0244514442307779842dfb057e969 254 PANTHER PTHR24322:SF513 158 190 1.0E-53 T 22-04-2016 APECO1_RS24755 97c0244514442307779842dfb057e969 254 Gene3D G3DSA:3.40.50.720 4 252 6.9E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24755 97c0244514442307779842dfb057e969 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS24755 97c0244514442307779842dfb057e969 254 Pfam PF00106 short chain dehydrogenase 10 203 1.8E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PANTHER PTHR24322 14 142 1.0E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PANTHER PTHR24322 158 190 1.0E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.5E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.5E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.5E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.5E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.5E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.5E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24755 97c0244514442307779842dfb057e969 254 SUPERFAMILY SSF51735 9 252 3.73E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 106 123 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 PRINTS PR00969 Pili chaperone signature 133 148 4.8E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 PRINTS PR00969 Pili chaperone signature 107 124 4.8E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 PRINTS PR00969 Pili chaperone signature 168 183 4.8E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 PRINTS PR00969 Pili chaperone signature 78 99 4.8E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 PRINTS PR00969 Pili chaperone signature 33 42 4.8E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 Gene3D G3DSA:2.60.40.1070 154 232 5.2E-26 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 228 8.2E-12 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 Gene3D G3DSA:2.60.40.360 33 149 3.8E-45 T 22-04-2016 IPR008962 PapD-like APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 PANTHER PTHR30251 3 236 3.1E-100 T 22-04-2016 APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 SUPERFAMILY SSF49584 146 231 2.22E-21 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 33 151 8.9E-39 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 PANTHER PTHR30251:SF11 3 236 3.1E-100 T 22-04-2016 APECO1_RS08300 895fdc8d24e280ef780924d608ed2e09 236 SUPERFAMILY SSF49354 33 151 5.49E-40 T 22-04-2016 IPR008962 PapD-like APECO1_RS23355 3fd88754a12fc1c168be01cf5edba922 522 Gene3D G3DSA:3.10.105.10 295 490 8.6E-35 T 22-04-2016 APECO1_RS23355 3fd88754a12fc1c168be01cf5edba922 522 PANTHER PTHR30290 24 518 7.5E-85 T 22-04-2016 APECO1_RS23355 3fd88754a12fc1c168be01cf5edba922 522 Gene3D G3DSA:3.40.190.10 140 294 4.7E-31 T 22-04-2016 APECO1_RS23355 3fd88754a12fc1c168be01cf5edba922 522 SUPERFAMILY SSF53850 21 513 4.34E-96 T 22-04-2016 APECO1_RS23355 3fd88754a12fc1c168be01cf5edba922 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 439 2.8E-65 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS23355 3fd88754a12fc1c168be01cf5edba922 522 PIRSF PIRSF002741 11 519 6.1E-61 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APECO1_RS02365 49c19b7509d7787ad8c5a7e3ce5df86b 46 Pfam PF12035 Protein of unknown function (DUF3521) 7 41 3.2E-18 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 SMART SM01340 212 331 1.5E-54 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 SUPERFAMILY SSF118116 434 613 5.49E-43 T 22-04-2016 APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 2.5E-35 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 Gene3D G3DSA:3.30.565.10 2 202 3.5E-78 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 PANTHER PTHR10073 3 359 2.2E-159 T 22-04-2016 APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 9.6E-108 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 Gene3D G3DSA:3.30.230.10 217 329 5.4E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.2E-12 T 22-04-2016 APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 612 25.896 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 SUPERFAMILY SSF55874 1 201 2.1E-57 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 SUPERFAMILY SSF54211 191 331 4.17E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 Pfam PF08676 MutL C terminal dimerisation domain 435 563 3.1E-24 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site APECO1_RS24255 99660222f08ce3cf238b65d28945bf3e 615 SMART SM00853 438 573 1.7E-17 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 PANTHER PTHR30352:SF4 107 305 8.1E-95 T 22-04-2016 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 PANTHER PTHR30352:SF4 7 64 8.1E-95 T 22-04-2016 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 SUPERFAMILY SSF102114 99 295 2.16E-19 T 22-04-2016 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 Pfam PF13353 4Fe-4S single cluster domain 22 177 4.8E-13 T 22-04-2016 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 PANTHER PTHR30352 107 305 8.1E-95 T 22-04-2016 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 PANTHER PTHR30352 7 64 8.1E-95 T 22-04-2016 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 12 297 2.3E-124 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 Pfam PF04055 Radical SAM superfamily 29 240 6.0E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 PIRSF PIRSF000371 1 305 2.5E-128 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 Gene3D G3DSA:3.80.30.10 129 304 1.9E-61 T 22-04-2016 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 SUPERFAMILY SSF54862 10 145 5.71E-23 T 22-04-2016 APECO1_RS23830 6c3fe69abf74bffd4ed2a5fa5fcb0028 305 Gene3D G3DSA:3.30.70.20 56 123 8.7E-18 T 22-04-2016 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 Gene3D G3DSA:3.30.565.10 286 454 1.6E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 3.1E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 PANTHER PTHR24423 178 456 2.8E-268 T 22-04-2016 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 PANTHER PTHR24423 1 134 2.8E-268 T 22-04-2016 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 SUPERFAMILY SSF55874 289 453 7.91E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 SMART SM00387 345 455 3.9E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 SMART SM00304 184 237 1.1E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 299 2.5E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 Pfam PF00672 HAMP domain 165 234 6.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 Gene3D G3DSA:1.10.287.130 228 285 8.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 SMART SM00388 238 300 1.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 SUPERFAMILY SSF47384 224 299 3.53E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 PANTHER PTHR24423:SF553 178 456 2.8E-268 T 22-04-2016 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 PANTHER PTHR24423:SF553 1 134 2.8E-268 T 22-04-2016 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 146 1.9E-10 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22320 19c5ed765ae963a9382e13d89227355c 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS20565 c70e50eee90c525cc0d59b1853f664b0 463 Gene3D G3DSA:3.40.640.10 78 321 1.0E-30 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS20565 c70e50eee90c525cc0d59b1853f664b0 463 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.1E-9 T 22-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APECO1_RS20565 c70e50eee90c525cc0d59b1853f664b0 463 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 463 257.7 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APECO1_RS20565 c70e50eee90c525cc0d59b1853f664b0 463 PANTHER PTHR32328 2 458 5.9E-263 T 22-04-2016 APECO1_RS20565 c70e50eee90c525cc0d59b1853f664b0 463 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 460 6.5E-191 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APECO1_RS20565 c70e50eee90c525cc0d59b1853f664b0 463 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 3.0E-181 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APECO1_RS20565 c70e50eee90c525cc0d59b1853f664b0 463 PANTHER PTHR32328:SF0 2 458 5.9E-263 T 22-04-2016 APECO1_RS20565 c70e50eee90c525cc0d59b1853f664b0 463 SUPERFAMILY SSF53383 74 462 3.5E-50 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS04540 a44074113c9cd332a2aeec6006ff29e6 115 SUPERFAMILY SSF160719 13 114 1.19E-29 T 22-04-2016 APECO1_RS04540 a44074113c9cd332a2aeec6006ff29e6 115 Gene3D G3DSA:3.10.450.40 10 114 1.4E-36 T 22-04-2016 APECO1_RS04540 a44074113c9cd332a2aeec6006ff29e6 115 Pfam PF04965 Gene 25-like lysozyme 18 103 2.2E-14 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD APECO1_RS04540 a44074113c9cd332a2aeec6006ff29e6 115 PANTHER PTHR35862:SF2 4 113 2.3E-30 T 22-04-2016 APECO1_RS04540 a44074113c9cd332a2aeec6006ff29e6 115 PANTHER PTHR35862 4 113 2.3E-30 T 22-04-2016 APECO1_RS14540 b44b65c53da62742b6371a034165908c 216 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 4.8E-26 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal APECO1_RS14540 b44b65c53da62742b6371a034165908c 216 SUPERFAMILY SSF89069 1 66 1.44E-22 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 APECO1_RS14540 b44b65c53da62742b6371a034165908c 216 PIRSF PIRSF016938 1 205 4.8E-37 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 APECO1_RS14540 b44b65c53da62742b6371a034165908c 216 PANTHER PTHR38104 1 216 9.9E-89 T 22-04-2016 APECO1_RS14540 b44b65c53da62742b6371a034165908c 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 3.6E-37 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 APECO1_RS25915 a474fb905bbdafc0d53c96c41aec15d3 85 SUPERFAMILY SSF52440 1 82 2.88E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS25915 a474fb905bbdafc0d53c96c41aec15d3 85 PANTHER PTHR11405 1 85 1.4E-48 T 22-04-2016 APECO1_RS25915 a474fb905bbdafc0d53c96c41aec15d3 85 Gene3D G3DSA:3.40.50.20 1 63 1.2E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS25915 a474fb905bbdafc0d53c96c41aec15d3 85 PANTHER PTHR11405:SF5 1 85 1.4E-48 T 22-04-2016 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 SUPERFAMILY SSF55904 563 711 3.27E-44 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 94 8.1E-14 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 Gene3D G3DSA:3.90.100.10 586 711 3.1E-38 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 6.4E-47 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 PANTHER PTHR11751:SF425 102 572 5.1E-211 T 22-04-2016 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 SUPERFAMILY SSF52172 1 100 5.96E-26 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 PANTHER PTHR11751 102 572 5.1E-211 T 22-04-2016 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 Gene3D G3DSA:3.90.1150.10 413 585 1.2E-73 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 543 1.5E-201 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 PIRSF PIRSF009393 2 711 1.2E-286 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 Gene3D G3DSA:3.40.640.10 101 411 5.9E-116 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 Gene3D G3DSA:3.40.50.220 1 100 2.1E-32 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 342 356 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS16795 6ac0528aa0c8f6e83fa6b89981e36eb6 711 SUPERFAMILY SSF53383 101 559 4.8E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS08710 8f2d66b7ba149ef4436401715b8a21bd 333 SUPERFAMILY SSF51556 5 326 2.54E-78 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS08710 8f2d66b7ba149ef4436401715b8a21bd 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 5.9E-110 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 APECO1_RS08710 8f2d66b7ba149ef4436401715b8a21bd 333 Gene3D G3DSA:3.20.20.140 5 332 5.5E-100 T 22-04-2016 APECO1_RS08710 8f2d66b7ba149ef4436401715b8a21bd 333 Pfam PF00962 Adenosine/AMP deaminase 6 328 1.5E-108 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 APECO1_RS08710 8f2d66b7ba149ef4436401715b8a21bd 333 PANTHER PTHR11409 6 333 7.0E-109 T 22-04-2016 APECO1_RS08710 8f2d66b7ba149ef4436401715b8a21bd 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 22-04-2016 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: REACT_1698 APECO1_RS08710 8f2d66b7ba149ef4436401715b8a21bd 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 55.056 T 22-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APECO1_RS09580 359cc2ab9a43705c447cacc1a5617997 148 PANTHER PTHR38452 1 147 1.1E-76 T 22-04-2016 APECO1_RS09580 359cc2ab9a43705c447cacc1a5617997 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 7.4E-46 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame APECO1_RS09580 359cc2ab9a43705c447cacc1a5617997 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.673 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame APECO1_RS09580 359cc2ab9a43705c447cacc1a5617997 148 PANTHER PTHR38452:SF1 1 147 1.1E-76 T 22-04-2016 APECO1_RS09580 359cc2ab9a43705c447cacc1a5617997 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 1 130 1.0E-41 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame APECO1_RS02515 c6d10f788cab36060a30a6609d07fc8f 152 Gene3D G3DSA:2.40.50.140 94 148 1.0E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS02515 c6d10f788cab36060a30a6609d07fc8f 152 PANTHER PTHR33507:SF3 1 152 3.4E-60 T 22-04-2016 APECO1_RS02515 c6d10f788cab36060a30a6609d07fc8f 152 SUPERFAMILY SSF141322 95 149 7.32E-5 T 22-04-2016 APECO1_RS02515 c6d10f788cab36060a30a6609d07fc8f 152 PANTHER PTHR33507 1 152 3.4E-60 T 22-04-2016 APECO1_RS02515 c6d10f788cab36060a30a6609d07fc8f 152 Gene3D G3DSA:1.20.1250.20 34 84 0.001 T 22-04-2016 APECO1_RS02515 c6d10f788cab36060a30a6609d07fc8f 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 1.2E-23 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 1.9E-68 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 PANTHER PTHR10584 1 308 8.3E-129 T 22-04-2016 APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 SUPERFAMILY SSF53613 7 290 1.87E-69 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 PANTHER PTHR10584:SF170 1 308 8.3E-129 T 22-04-2016 APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.9E-101 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 PIRSF PIRSF000535 2 311 7.9E-119 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 5.5E-99 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS12120 5648dbdd01a92664ee65d6337de4ceed 312 Gene3D G3DSA:3.40.1190.20 37 309 5.9E-86 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS04090 f19ce7832e4c8c77dac3364c7b25a5d4 410 SUPERFAMILY SSF103473 21 399 2.22E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS04090 f19ce7832e4c8c77dac3364c7b25a5d4 410 PANTHER PTHR23502 13 404 0.0 T 22-04-2016 APECO1_RS04090 f19ce7832e4c8c77dac3364c7b25a5d4 410 PANTHER PTHR23502:SF43 13 404 0.0 T 22-04-2016 APECO1_RS04090 f19ce7832e4c8c77dac3364c7b25a5d4 410 Gene3D G3DSA:1.20.1250.20 22 202 1.2E-23 T 22-04-2016 APECO1_RS04090 f19ce7832e4c8c77dac3364c7b25a5d4 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS04090 f19ce7832e4c8c77dac3364c7b25a5d4 410 Pfam PF07690 Major Facilitator Superfamily 27 361 1.9E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS12580 837fcb6ba79709bf6ad197cbf82a93cb 550 PANTHER PTHR33908 2 550 8.5E-171 T 22-04-2016 APECO1_RS12580 837fcb6ba79709bf6ad197cbf82a93cb 550 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 550 42.966 T 22-04-2016 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 UniPathway: UPA00037 APECO1_RS12580 837fcb6ba79709bf6ad197cbf82a93cb 550 PANTHER PTHR33908:SF3 2 550 8.5E-171 T 22-04-2016 APECO1_RS12580 837fcb6ba79709bf6ad197cbf82a93cb 550 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 4 237 1.0E-56 T 22-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 APECO1_RS08620 d1e784f85ba18d8fb1b88f47e8a44d05 460 PANTHER PTHR11785:SF77 1 456 5.3E-236 T 22-04-2016 APECO1_RS08620 d1e784f85ba18d8fb1b88f47e8a44d05 460 Pfam PF13520 Amino acid permease 5 442 4.1E-78 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS08620 d1e784f85ba18d8fb1b88f47e8a44d05 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 9.8E-185 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 APECO1_RS08620 d1e784f85ba18d8fb1b88f47e8a44d05 460 PIRSF PIRSF006060 1 459 8.5E-44 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS08620 d1e784f85ba18d8fb1b88f47e8a44d05 460 PANTHER PTHR11785 1 456 5.3E-236 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS15720 23017d57e85de93f1a450876d28b47e2 484 SUPERFAMILY SSF55103 204 481 2.88E-25 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APECO1_RS15720 23017d57e85de93f1a450876d28b47e2 484 Pfam PF02913 FAD linked oxidases, C-terminal domain 228 478 4.7E-19 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APECO1_RS15720 23017d57e85de93f1a450876d28b47e2 484 PANTHER PTHR11748:SF3 7 484 1.9E-131 T 22-04-2016 IPR025650 Alkyldihydroxyacetonephosphate synthase GO:0008609|GO:0008610 KEGG: 00565+2.5.1.26|UniPathway: UPA00781 APECO1_RS15720 23017d57e85de93f1a450876d28b47e2 484 Pfam PF01565 FAD binding domain 51 190 2.1E-34 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APECO1_RS15720 23017d57e85de93f1a450876d28b47e2 484 Gene3D G3DSA:1.10.45.10 454 477 4.1E-4 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APECO1_RS15720 23017d57e85de93f1a450876d28b47e2 484 Gene3D G3DSA:3.30.465.10 108 225 9.4E-30 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS15720 23017d57e85de93f1a450876d28b47e2 484 Gene3D G3DSA:3.30.43.10 6 107 5.4E-16 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APECO1_RS15720 23017d57e85de93f1a450876d28b47e2 484 PANTHER PTHR11748 7 484 1.9E-131 T 22-04-2016 APECO1_RS15720 23017d57e85de93f1a450876d28b47e2 484 SUPERFAMILY SSF56176 6 225 1.78E-47 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS24135 812912794cc80a1be6472a871e11a1e4 41 Pfam PF08085 Entericidin EcnA/B family 20 40 1.8E-7 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 APECO1_RS04660 0f7490d45baddf54e20237a41e546b97 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.523 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APECO1_RS04660 0f7490d45baddf54e20237a41e546b97 227 Pfam PF02224 Cytidylate kinase 8 221 4.1E-85 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APECO1_RS04660 0f7490d45baddf54e20237a41e546b97 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.5E-97 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APECO1_RS04660 0f7490d45baddf54e20237a41e546b97 227 Gene3D G3DSA:3.40.50.300 6 221 2.4E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04660 0f7490d45baddf54e20237a41e546b97 227 SUPERFAMILY SSF52540 6 224 5.98E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04660 0f7490d45baddf54e20237a41e546b97 227 PANTHER PTHR21299 6 226 1.4E-86 T 22-04-2016 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 SUPERFAMILY SSF50800 74 168 1.74E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 Gene3D G3DSA:3.40.1380.20 332 480 1.3E-39 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 Gene3D G3DSA:3.20.20.60 172 331 1.0E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 Gene3D G3DSA:3.20.20.60 6 76 1.0E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 PANTHER PTHR11817:SF17 1 479 0.0 T 22-04-2016 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 9.1E-176 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.7E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 4.7E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 4.7E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 4.7E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.7E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 4.7E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 4.7E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 PANTHER PTHR11817 1 479 0.0 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 SUPERFAMILY SSF51621 3 78 1.92E-86 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 SUPERFAMILY SSF51621 160 345 1.92E-86 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 6.1E-131 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 2.0E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 SUPERFAMILY SSF52935 329 479 2.35E-39 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09935 4b8e4bfeb59de8283bdc27ec5c56de65 480 Gene3D G3DSA:2.40.33.10 77 170 1.7E-27 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS01860 24035ecce606bd2fc8f609a8aecb5d2d 146 SUPERFAMILY SSF51161 1 136 7.94E-21 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS01860 24035ecce606bd2fc8f609a8aecb5d2d 146 Gene3D G3DSA:2.160.10.10 1 134 6.4E-24 T 22-04-2016 APECO1_RS01860 24035ecce606bd2fc8f609a8aecb5d2d 146 PANTHER PTHR22572:SF15 1 127 3.5E-14 T 22-04-2016 APECO1_RS01860 24035ecce606bd2fc8f609a8aecb5d2d 146 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 1 32 3.8E-6 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS01860 24035ecce606bd2fc8f609a8aecb5d2d 146 PANTHER PTHR22572 1 127 3.5E-14 T 22-04-2016 APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 PANTHER PTHR11938:SF110 35 194 2.1E-97 T 22-04-2016 APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 Gene3D G3DSA:3.30.70.20 96 128 5.6E-12 T 22-04-2016 APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 26 7.2E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 Gene3D G3DSA:3.30.70.20 36 95 1.3E-33 T 22-04-2016 APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 Gene3D G3DSA:3.30.70.20 166 210 1.3E-33 T 22-04-2016 APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 Gene3D G3DSA:3.30.70.20 129 165 1.0E-14 T 22-04-2016 APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 Pfam PF13247 4Fe-4S dicluster domain 83 181 2.2E-24 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 Pfam PF00037 4Fe-4S binding domain 40 56 1.6E-4 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 SUPERFAMILY SSF54862 36 215 5.65E-64 T 22-04-2016 APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 222 2.3E-125 T 22-04-2016 IPR017567 Cytochrome c nitrite reductase, Fe-S protein APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 125 136 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS23300 cb67ce553c0ba7d3484656a62deca7b4 223 PANTHER PTHR11938 35 194 2.1E-97 T 22-04-2016 APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 291 7.7E-35 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 PIRSF PIRSF000103 1 296 2.3E-59 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 PANTHER PTHR22981 1 296 1.8E-133 T 22-04-2016 APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 Gene3D G3DSA:3.40.50.720 7 168 2.0E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 Gene3D G3DSA:1.10.1040.10 172 293 5.0E-45 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 SUPERFAMILY SSF48179 170 294 1.25E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 166 1.4E-35 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 PANTHER PTHR22981:SF27 1 296 1.8E-133 T 22-04-2016 APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 APECO1_RS15565 d151cb2350ec30c5b130e784bca952e8 302 SUPERFAMILY SSF51735 8 168 1.52E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00715 0c4b65c44498a22741210287e17540e2 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-66 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APECO1_RS00715 0c4b65c44498a22741210287e17540e2 126 PANTHER PTHR21012 2 126 1.3E-67 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APECO1_RS00715 0c4b65c44498a22741210287e17540e2 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 5.5E-69 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APECO1_RS00715 0c4b65c44498a22741210287e17540e2 126 Gene3D G3DSA:2.40.40.20 1 124 6.7E-56 T 22-04-2016 APECO1_RS00715 0c4b65c44498a22741210287e17540e2 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.5E-47 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APECO1_RS00715 0c4b65c44498a22741210287e17540e2 126 SUPERFAMILY SSF50692 1 121 7.95E-48 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS00715 0c4b65c44498a22741210287e17540e2 126 PIRSF PIRSF006246 1 125 9.6E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APECO1_RS00715 0c4b65c44498a22741210287e17540e2 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 71.341 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APECO1_RS00715 0c4b65c44498a22741210287e17540e2 126 PANTHER PTHR21012:SF0 2 126 1.3E-67 T 22-04-2016 APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 Gene3D G3DSA:3.40.50.300 6 207 6.7E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 SMART SM00490 259 340 4.8E-32 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 Pfam PF03880 DbpA RNA binding domain 489 558 2.0E-20 T 22-04-2016 IPR005580 DbpA, RNA-binding domain APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 SMART SM00487 25 223 4.7E-65 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 Pfam PF12343 Cold shock protein DEAD box A 568 629 1.5E-11 T 22-04-2016 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 PANTHER PTHR24031 6 453 4.2E-293 T 22-04-2016 APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 PANTHER PTHR24031 532 628 4.2E-293 T 22-04-2016 APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 560 47.28 T 22-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 SUPERFAMILY SSF52540 75 361 3.81E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 Gene3D G3DSA:3.40.50.300 208 375 1.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 Pfam PF00270 DEAD/DEAH box helicase 31 195 6.2E-52 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 PANTHER PTHR24031:SF261 6 453 4.2E-293 T 22-04-2016 APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 PANTHER PTHR24031:SF261 532 628 4.2E-293 T 22-04-2016 APECO1_RS18260 63ab99fd94e9336d61e988e8a8953030 629 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.8E-29 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS01290 e40d7e2253c3e5beb7dad79f62aa3ef6 255 Gene3D G3DSA:3.60.20.10 1 249 8.2E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS01290 e40d7e2253c3e5beb7dad79f62aa3ef6 255 PANTHER PTHR11907 1 252 6.2E-133 T 22-04-2016 APECO1_RS01290 e40d7e2253c3e5beb7dad79f62aa3ef6 255 Pfam PF13230 Glutamine amidotransferases class-II 1 254 1.5E-114 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 APECO1_RS01290 e40d7e2253c3e5beb7dad79f62aa3ef6 255 PANTHER PTHR11907:SF10 1 252 6.2E-133 T 22-04-2016 APECO1_RS01290 e40d7e2253c3e5beb7dad79f62aa3ef6 255 SUPERFAMILY SSF56235 2 253 4.37E-53 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 PANTHER PTHR24423 1 11 1.3E-224 T 22-04-2016 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 SUPERFAMILY SSF47384 236 316 8.83E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 Gene3D G3DSA:1.10.287.130 241 313 4.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 470 7.4E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 SUPERFAMILY SSF55874 321 469 1.57E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 PANTHER PTHR24423 189 469 1.3E-224 T 22-04-2016 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 Gene3D G3DSA:3.30.565.10 319 472 8.0E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 PANTHER PTHR24423:SF473 1 11 1.3E-224 T 22-04-2016 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 PANTHER PTHR24423:SF473 189 469 1.3E-224 T 22-04-2016 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 SMART SM00387 360 472 1.9E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 3.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 316 2.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 Pfam PF00672 HAMP domain 176 243 6.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS14450 0aa9a3296fe399431f22d956c437e5ff 475 SMART SM00388 249 317 3.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS03925 235c90fa10047625d6d1f6b499a59403 240 Pfam PF00005 ABC transporter 17 165 1.0E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS03925 235c90fa10047625d6d1f6b499a59403 240 SMART SM00382 26 213 1.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS03925 235c90fa10047625d6d1f6b499a59403 240 Gene3D G3DSA:3.40.50.300 1 237 4.7E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03925 235c90fa10047625d6d1f6b499a59403 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS03925 235c90fa10047625d6d1f6b499a59403 240 PIRSF PIRSF039085 1 240 2.3E-109 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APECO1_RS03925 235c90fa10047625d6d1f6b499a59403 240 PANTHER PTHR24220:SF569 3 239 5.5E-178 T 22-04-2016 APECO1_RS03925 235c90fa10047625d6d1f6b499a59403 240 SUPERFAMILY SSF52540 1 235 2.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03925 235c90fa10047625d6d1f6b499a59403 240 PANTHER PTHR24220 3 239 5.5E-178 T 22-04-2016 APECO1_RS11800 2a47ef84888b5f89d30ac53d36b7f2d6 344 Gene3D G3DSA:2.60.40.1090 195 344 3.4E-8 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS11800 2a47ef84888b5f89d30ac53d36b7f2d6 344 SUPERFAMILY SSF49401 194 344 4.82E-11 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS11800 2a47ef84888b5f89d30ac53d36b7f2d6 344 Pfam PF00419 Fimbrial protein 183 343 5.8E-19 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS11800 2a47ef84888b5f89d30ac53d36b7f2d6 344 PIRSF PIRSF030811 1 344 9.2E-165 T 22-04-2016 IPR016959 Uncharacterised conserved protein UCP030811 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82866 809 1033 9.29E-45 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82714 182 271 5.1E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PANTHER PTHR32063 1 1048 0.0 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 2.4E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.4E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.4E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.4E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.4E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.4E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.4E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 2.4E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.4E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1049 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82866 296 497 1.7E-48 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82714 725 812 2.49E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82693 567 671 2.25E-33 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:1.10.3850.10 278 498 3.6E-60 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:1.10.3850.10 817 1031 3.9E-56 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:3.30.70.1430 38 140 2.0E-36 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1030 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:3.30.2090.10 724 812 1.3E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 PANTHER PTHR32063:SF13 1 1048 0.0 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82693 135 182 4.13E-27 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82693 274 330 4.13E-27 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 SUPERFAMILY SSF82693 38 132 4.88E-28 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:3.30.70.1430 569 671 1.2E-41 T 22-04-2016 APECO1_RS02345 c564a138f040b7ce63fb3db8488183e1 1049 Gene3D G3DSA:3.30.2090.10 181 275 6.5E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS09480 20e4354f6069138a1b9cc80c614db1c6 452 Pfam PF00083 Sugar (and other) transporter 55 451 6.4E-36 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS09480 20e4354f6069138a1b9cc80c614db1c6 452 SUPERFAMILY SSF103473 9 449 5.75E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS09480 20e4354f6069138a1b9cc80c614db1c6 452 Gene3D G3DSA:1.20.1250.20 22 214 1.5E-20 T 22-04-2016 APECO1_RS09480 20e4354f6069138a1b9cc80c614db1c6 452 PANTHER PTHR24064:SF293 1 450 8.3E-190 T 22-04-2016 APECO1_RS09480 20e4354f6069138a1b9cc80c614db1c6 452 Gene3D G3DSA:1.20.1250.20 262 443 1.4E-18 T 22-04-2016 APECO1_RS09480 20e4354f6069138a1b9cc80c614db1c6 452 PANTHER PTHR24064 1 450 8.3E-190 T 22-04-2016 APECO1_RS01655 29fe7ffcad2be15cbbc66f1abd8eab15 187 Pfam PF00589 Phage integrase family 4 175 6.2E-47 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS01655 29fe7ffcad2be15cbbc66f1abd8eab15 187 PANTHER PTHR30349 3 182 5.6E-107 T 22-04-2016 APECO1_RS01655 29fe7ffcad2be15cbbc66f1abd8eab15 187 SUPERFAMILY SSF56349 4 178 2.44E-43 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS01655 29fe7ffcad2be15cbbc66f1abd8eab15 187 PANTHER PTHR30349:SF31 3 182 5.6E-107 T 22-04-2016 APECO1_RS01655 29fe7ffcad2be15cbbc66f1abd8eab15 187 Gene3D G3DSA:1.10.443.10 4 173 5.2E-40 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 PANTHER PTHR21060 2 398 3.6E-284 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 Gene3D G3DSA:3.30.420.40 208 398 7.4E-74 T 22-04-2016 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 SUPERFAMILY SSF53067 160 398 6.02E-84 T 22-04-2016 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 302 315 2.3E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 325 341 2.3E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 206 227 2.3E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 6 17 2.3E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 176 189 2.3E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 PRINTS PR00471 Acetate kinase family signature 380 392 2.3E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 SUPERFAMILY SSF53067 4 199 3.17E-63 T 22-04-2016 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 9.7E-188 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 PIRSF PIRSF000722 2 400 4.5E-143 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.948 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 PANTHER PTHR21060:SF15 2 398 3.6E-284 T 22-04-2016 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 Pfam PF00871 Acetokinase family 6 393 4.5E-178 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS12765 d3380e9e3ca970d9dfbed22064b59906 400 Gene3D G3DSA:3.30.420.40 5 207 7.5E-10 T 22-04-2016 APECO1_RS00770 cd10eec30cfe3c72266b924b43242cd2 159 SUPERFAMILY SSF55083 1 153 2.22E-53 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS00770 cd10eec30cfe3c72266b924b43242cd2 159 Gene3D G3DSA:3.30.70.560 3 149 4.4E-56 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS00770 cd10eec30cfe3c72266b924b43242cd2 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.1E-46 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS00770 cd10eec30cfe3c72266b924b43242cd2 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS00770 cd10eec30cfe3c72266b924b43242cd2 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.4E-35 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS00770 cd10eec30cfe3c72266b924b43242cd2 159 PANTHER PTHR20941 1 150 1.2E-75 T 22-04-2016 APECO1_RS08280 f6091530f642e324b53f954ed7f06bf6 304 SUPERFAMILY SSF49401 184 304 1.7E-22 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS08280 f6091530f642e324b53f954ed7f06bf6 304 Pfam PF09160 FimH, mannose binding 27 171 6.1E-64 T 22-04-2016 IPR015243 FimH, mannose-binding APECO1_RS08280 f6091530f642e324b53f954ed7f06bf6 304 Gene3D G3DSA:2.60.40.1090 183 304 2.8E-30 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS08280 f6091530f642e324b53f954ed7f06bf6 304 Gene3D G3DSA:2.60.40.1090 23 182 1.3E-68 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS08280 f6091530f642e324b53f954ed7f06bf6 304 SUPERFAMILY SSF49401 25 182 9.94E-67 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS15670 d40033ca0d72b49c65bf4e07e5b00670 244 Gene3D G3DSA:3.40.50.620 9 216 1.2E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS15670 d40033ca0d72b49c65bf4e07e5b00670 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 2.0E-104 T 22-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 APECO1_RS15670 d40033ca0d72b49c65bf4e07e5b00670 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 3.0E-96 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 APECO1_RS15670 d40033ca0d72b49c65bf4e07e5b00670 244 PIRSF PIRSF000857 6 244 1.6E-54 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 APECO1_RS15670 d40033ca0d72b49c65bf4e07e5b00670 244 PANTHER PTHR23293:SF5 5 244 8.3E-100 T 22-04-2016 APECO1_RS15670 d40033ca0d72b49c65bf4e07e5b00670 244 PANTHER PTHR23293 5 244 8.3E-100 T 22-04-2016 APECO1_RS15670 d40033ca0d72b49c65bf4e07e5b00670 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 1.4E-51 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APECO1_RS15670 d40033ca0d72b49c65bf4e07e5b00670 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 40.564 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 APECO1_RS15670 d40033ca0d72b49c65bf4e07e5b00670 244 SUPERFAMILY SSF52402 21 208 4.95E-53 T 22-04-2016 APECO1_RS22325 79eddf006cd6d225a857d6375d591d63 232 Pfam PF00072 Response regulator receiver domain 4 112 4.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS22325 79eddf006cd6d225a857d6375d591d63 232 SMART SM00448 2 111 1.2E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS22325 79eddf006cd6d225a857d6375d591d63 232 PANTHER PTHR26402 2 231 4.2E-82 T 22-04-2016 APECO1_RS22325 79eddf006cd6d225a857d6375d591d63 232 SUPERFAMILY SSF52172 2 188 6.69E-42 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS22325 79eddf006cd6d225a857d6375d591d63 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.5E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS22325 79eddf006cd6d225a857d6375d591d63 232 SMART SM00862 152 228 9.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS22325 79eddf006cd6d225a857d6375d591d63 232 Gene3D G3DSA:3.40.50.2300 2 126 3.6E-41 T 22-04-2016 APECO1_RS22325 79eddf006cd6d225a857d6375d591d63 232 PANTHER PTHR26402:SF117 2 231 4.2E-82 T 22-04-2016 APECO1_RS22325 79eddf006cd6d225a857d6375d591d63 232 Gene3D G3DSA:1.10.10.10 130 229 4.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 3 147 7.7E-69 T 22-04-2016 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 140 7.5E-35 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 PRINTS PR00446 Hydrogen uptake protein signature 3 15 5.8E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 PRINTS PR00446 Hydrogen uptake protein signature 15 26 5.8E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 PRINTS PR00446 Hydrogen uptake protein signature 33 50 5.8E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 PRINTS PR00446 Hydrogen uptake protein signature 56 66 5.8E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 PRINTS PR00446 Hydrogen uptake protein signature 67 83 5.8E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 Gene3D G3DSA:3.40.50.1450 5 142 6.8E-24 T 22-04-2016 IPR023430 Peptidase HybD-like domain APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 SUPERFAMILY SSF53163 4 152 1.05E-34 T 22-04-2016 IPR023430 Peptidase HybD-like domain APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 PANTHER PTHR30302 1 156 1.1E-70 T 22-04-2016 APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 Pfam PF01750 Hydrogenase maturation protease 23 140 3.9E-29 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS15465 b553317b562bd0ae28d0742801ce8a7f 156 PANTHER PTHR30302:SF4 1 156 1.1E-70 T 22-04-2016 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.3E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.3E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.3E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.3E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.3E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.5E-112 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 Gene3D G3DSA:3.40.190.10 3 110 3.6E-48 T 22-04-2016 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 40.219 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 296 2.0E-25 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 PIRSF PIRSF001438 1 311 2.6E-123 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 Gene3D G3DSA:3.40.190.10 111 199 7.2E-40 T 22-04-2016 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 SUPERFAMILY SSF53850 5 219 9.72E-86 T 22-04-2016 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 1.9E-78 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 PANTHER PTHR11557 5 307 5.0E-169 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 SUPERFAMILY SSF54782 220 308 1.7E-29 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21655 b5d2c0a91a878f5294bdae440e453577 313 Gene3D G3DSA:3.30.160.40 221 306 2.1E-30 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 2.0E-194 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 SUPERFAMILY SSF53383 130 562 2.46E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 PIRSF PIRSF009393 1 712 3.3E-280 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.9E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 SUPERFAMILY SSF55904 566 708 2.88E-43 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 Gene3D G3DSA:3.90.100.10 587 709 5.2E-38 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 Gene3D G3DSA:3.90.1150.10 426 586 1.4E-65 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 PANTHER PTHR11751 510 630 9.2E-253 T 22-04-2016 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 PANTHER PTHR11751 482 490 9.2E-253 T 22-04-2016 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 PANTHER PTHR11751 131 459 9.2E-253 T 22-04-2016 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 Gene3D G3DSA:3.40.640.10 130 423 1.6E-99 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 5.8E-27 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 PANTHER PTHR11751:SF406 510 630 9.2E-253 T 22-04-2016 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 PANTHER PTHR11751:SF406 482 490 9.2E-253 T 22-04-2016 APECO1_RS00980 5bf9228ea539ecbfc66de6cca0d67cfc 713 PANTHER PTHR11751:SF406 131 459 9.2E-253 T 22-04-2016 APECO1_RS07910 14e28f58e1180442f779e96470626ea1 97 SUPERFAMILY SSF58104 3 77 8.5E-13 T 22-04-2016 APECO1_RS07910 14e28f58e1180442f779e96470626ea1 97 PANTHER PTHR32089 1 78 1.9E-47 T 22-04-2016 APECO1_RS07910 14e28f58e1180442f779e96470626ea1 97 PANTHER PTHR32089:SF35 1 78 1.9E-47 T 22-04-2016 APECO1_RS07910 14e28f58e1180442f779e96470626ea1 97 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 2 74 1.5E-19 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APECO1_RS07910 14e28f58e1180442f779e96470626ea1 97 Gene3D G3DSA:1.10.287.950 3 47 1.2E-7 T 22-04-2016 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 Gene3D G3DSA:3.60.21.10 16 333 3.4E-79 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 ProSitePatterns PS00786 5'-nucleotidase signature 2. 102 113 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 SUPERFAMILY SSF55816 326 515 3.14E-50 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 PANTHER PTHR11575 5 213 9.1E-189 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 PANTHER PTHR11575 230 516 9.1E-189 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 PRINTS PR01607 Apyrase family signature 200 217 9.0E-22 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 PRINTS PR01607 Apyrase family signature 380 403 9.0E-22 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 PRINTS PR01607 Apyrase family signature 21 39 9.0E-22 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 PRINTS PR01607 Apyrase family signature 450 469 9.0E-22 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 PRINTS PR01607 Apyrase family signature 235 258 9.0E-22 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 PANTHER PTHR11575:SF27 5 213 9.1E-189 T 22-04-2016 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 PANTHER PTHR11575:SF27 230 516 9.1E-189 T 22-04-2016 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 Gene3D G3DSA:3.90.780.10 334 513 4.0E-49 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 Pfam PF00149 Calcineurin-like phosphoesterase 24 252 9.1E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 SUPERFAMILY SSF56300 21 326 2.42E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS22490 0d6d1e5fa36befa7c07893ab2a4406d6 517 Pfam PF02872 5'-nucleotidase, C-terminal domain 335 476 6.2E-40 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 452 1.8E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 463 3.2E-215 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 Gene3D G3DSA:2.70.70.10 499 643 8.5E-56 T 22-04-2016 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 SUPERFAMILY SSF55604 392 465 4.32E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 563 575 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 Pfam PF00367 phosphotransferase system, EIIB 396 427 9.6E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 SUPERFAMILY SSF51261 497 646 2.44E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 501 621 1.8E-47 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 Gene3D G3DSA:3.30.1360.60 390 466 6.6E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 500 624 1.5E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 405 422 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 PANTHER PTHR30009 4 477 7.5E-255 T 22-04-2016 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 Pfam PF02378 Phosphotransferase system, EIIC 12 300 4.8E-75 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS03250 45a87b86d1c09b6632dacc2d8a605dab 648 PANTHER PTHR30009:SF4 4 477 7.5E-255 T 22-04-2016 APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 PANTHER PTHR30328:SF11 2 220 2.2E-62 T 22-04-2016 APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 Gene3D G3DSA:1.10.10.60 2 58 3.9E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 2.8E-48 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 PANTHER PTHR30328 2 220 2.2E-62 T 22-04-2016 APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 6.4E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 SUPERFAMILY SSF46689 2 65 1.95E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 Gene3D G3DSA:1.10.357.10 59 205 3.4E-19 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 SUPERFAMILY SSF48498 84 202 1.17E-16 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.8E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS18780 9014d090b0d760b65a1dae78c52932a4 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.8E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS24055 2ed0d82ceab6fc04b518f40a5cc21b5c 347 Gene3D G3DSA:1.25.40.10 49 246 9.0E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS24055 2ed0d82ceab6fc04b518f40a5cc21b5c 347 SMART SM00028 115 148 39.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS24055 2ed0d82ceab6fc04b518f40a5cc21b5c 347 SMART SM00028 181 214 22.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS24055 2ed0d82ceab6fc04b518f40a5cc21b5c 347 SMART SM00028 62 95 130.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS24055 2ed0d82ceab6fc04b518f40a5cc21b5c 347 SUPERFAMILY SSF48452 59 270 7.17E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 SUPERFAMILY SSF46689 237 285 6.72E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 Gene3D G3DSA:2.60.120.280 56 193 5.1E-7 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 Gene3D G3DSA:1.10.10.60 194 238 1.0E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 Pfam PF02311 AraC-like ligand binding domain 65 129 2.4E-6 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 SUPERFAMILY SSF51215 14 165 3.27E-11 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 SUPERFAMILY SSF46689 184 234 4.44E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 Gene3D G3DSA:1.10.10.60 239 283 5.7E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 Pfam PF12833 Helix-turn-helix domain 207 284 7.4E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 SMART SM00342 200 283 5.6E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 PANTHER PTHR11019 48 288 5.7E-76 T 22-04-2016 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 PANTHER PTHR11019:SF77 48 288 5.7E-76 T 22-04-2016 APECO1_RS21050 3c6f3abcb7c311e5bc23337caacf080a 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS11870 32a3b623c64ee20e8a7734c12c89bcbc 378 PANTHER PTHR30634:SF7 11 378 4.7E-112 T 22-04-2016 APECO1_RS11870 32a3b623c64ee20e8a7734c12c89bcbc 378 PANTHER PTHR30634 11 378 4.7E-112 T 22-04-2016 APECO1_RS11870 32a3b623c64ee20e8a7734c12c89bcbc 378 Pfam PF05762 VWA domain containing CoxE-like protein 151 372 1.0E-66 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like APECO1_RS11870 32a3b623c64ee20e8a7734c12c89bcbc 378 SMART SM00327 214 373 6.2E-11 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS11870 32a3b623c64ee20e8a7734c12c89bcbc 378 SUPERFAMILY SSF53300 212 357 3.66E-21 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS11870 32a3b623c64ee20e8a7734c12c89bcbc 378 Gene3D G3DSA:3.40.50.410 215 335 2.1E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 SMART SM00387 581 692 2.8E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PANTHER PTHR24423 28 56 7.9E-264 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PANTHER PTHR24423 824 948 7.9E-264 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PANTHER PTHR24423 355 695 7.9E-264 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PANTHER PTHR24423 734 786 7.9E-264 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 Gene3D G3DSA:3.30.450.20 417 472 1.7E-6 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 Gene3D G3DSA:1.10.287.130 473 520 2.4E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 Gene3D G3DSA:3.30.565.10 521 693 3.9E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 941 27.386 T 22-04-2016 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 4.8E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 4.8E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 4.8E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 4.8E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 SMART SM00448 825 936 2.7E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 690 1.5E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 5.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PANTHER PTHR24423:SF382 28 56 7.9E-264 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PANTHER PTHR24423:SF382 355 695 7.9E-264 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PANTHER PTHR24423:SF382 824 948 7.9E-264 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 PANTHER PTHR24423:SF382 734 786 7.9E-264 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 Pfam PF00072 Response regulator receiver domain 827 936 2.6E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 SUPERFAMILY SSF52172 701 815 3.62E-42 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 SMART SM00388 469 534 1.7E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 SUPERFAMILY SSF47384 453 535 2.16E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 SUPERFAMILY SSF52172 824 947 3.13E-38 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 709 799 1.1E-34 T 22-04-2016 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 Gene3D G3DSA:3.40.50.2300 822 946 1.3E-39 T 22-04-2016 APECO1_RS12385 762cb4704714fd68772c8fbf345edb3b 949 SUPERFAMILY SSF55874 523 694 3.8E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 PANTHER PTHR13789 4 391 1.0E-258 T 22-04-2016 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 3.7E-132 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 Pfam PF01494 FAD binding domain 6 338 4.8E-27 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 4.6E-18 T 22-04-2016 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 4.6E-18 T 22-04-2016 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 4.6E-18 T 22-04-2016 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.6E-18 T 22-04-2016 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 PANTHER PTHR13789:SF233 4 391 1.0E-258 T 22-04-2016 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 Gene3D G3DSA:3.50.50.60 268 354 1.4E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 Gene3D G3DSA:3.50.50.60 6 183 1.4E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 SUPERFAMILY SSF51905 6 178 1.22E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS03185 23f72dac1f75c7f6943a26dd4468bfc3 391 SUPERFAMILY SSF51905 267 383 1.22E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS20570 bdf43d94844e8e1113c69c49f67c0e25 202 SUPERFAMILY SSF52833 1 100 1.28E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS20570 bdf43d94844e8e1113c69c49f67c0e25 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 97 192 5.2E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APECO1_RS20570 bdf43d94844e8e1113c69c49f67c0e25 202 SUPERFAMILY SSF47616 73 199 3.13E-15 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS20570 bdf43d94844e8e1113c69c49f67c0e25 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 5.1E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APECO1_RS20570 bdf43d94844e8e1113c69c49f67c0e25 202 Gene3D G3DSA:3.40.30.10 1 89 1.7E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS20570 bdf43d94844e8e1113c69c49f67c0e25 202 PANTHER PTHR11260:SF256 1 200 3.0E-121 T 22-04-2016 APECO1_RS20570 bdf43d94844e8e1113c69c49f67c0e25 202 PANTHER PTHR11260 1 200 3.0E-121 T 22-04-2016 APECO1_RS20570 bdf43d94844e8e1113c69c49f67c0e25 202 Gene3D G3DSA:1.20.1050.10 90 197 1.9E-12 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 SUPERFAMILY SSF52540 187 438 4.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 276 291 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 Pfam PF00158 Sigma-54 interaction domain 188 354 6.6E-51 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 2 185 1.8E-84 T 22-04-2016 IPR009715 Regulator of RNA terminal phosphate cyclase APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 SMART SM00382 207 353 6.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 Gene3D G3DSA:1.10.8.60 363 440 1.7E-12 T 22-04-2016 APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 PANTHER PTHR32071 7 456 0.0 T 22-04-2016 APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 PIRSF PIRSF037354 1 469 4.4E-259 T 22-04-2016 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 Gene3D G3DSA:3.40.50.300 184 359 4.9E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19565 184cdd1c828fc811dd3554e6ac5677d1 519 PANTHER PTHR32071:SF14 7 456 0.0 T 22-04-2016 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 APECO1_RS00550 a13176d103ece101eb5b0e246f55b4c7 206 PANTHER PTHR10695 1 195 4.8E-81 T 22-04-2016 APECO1_RS00550 a13176d103ece101eb5b0e246f55b4c7 206 SUPERFAMILY SSF52540 1 190 3.79E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00550 a13176d103ece101eb5b0e246f55b4c7 206 Pfam PF01121 Dephospho-CoA kinase 3 177 3.1E-77 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APECO1_RS00550 a13176d103ece101eb5b0e246f55b4c7 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 27.802 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APECO1_RS00550 a13176d103ece101eb5b0e246f55b4c7 206 Gene3D G3DSA:3.40.50.300 2 199 3.2E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00550 a13176d103ece101eb5b0e246f55b4c7 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 3.1E-72 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APECO1_RS19765 37548f635b68dea3138128a61e47bfbc 237 Gene3D G3DSA:3.40.50.300 2 232 1.7E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19765 37548f635b68dea3138128a61e47bfbc 237 Pfam PF00005 ABC transporter 21 165 2.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19765 37548f635b68dea3138128a61e47bfbc 237 SUPERFAMILY SSF52540 4 234 8.31E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19765 37548f635b68dea3138128a61e47bfbc 237 SMART SM00382 30 216 6.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19765 37548f635b68dea3138128a61e47bfbc 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS19765 37548f635b68dea3138128a61e47bfbc 237 PANTHER PTHR24220:SF568 7 236 3.5E-140 T 22-04-2016 APECO1_RS19765 37548f635b68dea3138128a61e47bfbc 237 PIRSF PIRSF039137 1 237 4.3E-104 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 APECO1_RS19765 37548f635b68dea3138128a61e47bfbc 237 PANTHER PTHR24220 7 236 3.5E-140 T 22-04-2016 APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 Gene3D G3DSA:3.90.25.10 169 204 1.6E-39 T 22-04-2016 APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 Gene3D G3DSA:3.90.25.10 259 299 1.6E-39 T 22-04-2016 APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 SUPERFAMILY SSF51735 1 318 1.11E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 Gene3D G3DSA:3.40.50.720 220 258 1.6E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 Gene3D G3DSA:3.40.50.720 1 168 1.6E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 PANTHER PTHR10366 5 315 1.6E-134 T 22-04-2016 APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 PANTHER PTHR10366:SF246 5 315 1.6E-134 T 22-04-2016 APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 Gene3D G3DSA:3.90.25.10 205 219 5.1E-13 T 22-04-2016 APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 Gene3D G3DSA:3.90.25.10 300 318 5.1E-13 T 22-04-2016 APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 49.376 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 APECO1_RS11385 445c39e06975b24e15b4e0134877863e 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 228 2.9E-73 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APECO1_RS14665 6ac8f880804f6f08585ad0ba1b0ba3ee 80 SUPERFAMILY SSF48295 1 51 9.94E-9 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APECO1_RS16990 c701a3c764025b70b78132efacd80d67 295 Gene3D G3DSA:3.30.420.10 120 276 9.8E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS16990 c701a3c764025b70b78132efacd80d67 295 Pfam PF13276 HTH-like domain 47 103 4.4E-17 T 22-04-2016 IPR025948 HTH-like domain APECO1_RS16990 c701a3c764025b70b78132efacd80d67 295 PANTHER PTHR32552 3 290 5.4E-61 T 22-04-2016 APECO1_RS16990 c701a3c764025b70b78132efacd80d67 295 SUPERFAMILY SSF53098 120 280 2.91E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS16990 c701a3c764025b70b78132efacd80d67 295 Pfam PF00665 Integrase core domain 126 239 2.0E-27 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 PANTHER PTHR24423:SF445 92 170 1.5E-94 T 22-04-2016 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 PANTHER PTHR24423:SF445 221 457 1.5E-94 T 22-04-2016 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 Gene3D G3DSA:1.10.287.130 231 298 2.6E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 3.0E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 3.0E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 3.0E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 3.0E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 SUPERFAMILY SSF55874 293 449 1.07E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 Gene3D G3DSA:3.30.565.10 303 449 1.2E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 SUPERFAMILY SSF47384 224 300 2.94E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 PANTHER PTHR24423 92 170 1.5E-94 T 22-04-2016 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 PANTHER PTHR24423 221 457 1.5E-94 T 22-04-2016 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 299 5.2E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 449 2.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 SMART SM00388 237 303 1.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 SUPERFAMILY SSF103190 34 154 2.43E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like APECO1_RS22825 8f23d676c46d8dfce8be62820f71c6cf 458 SMART SM00387 345 451 8.0E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 PANTHER PTHR20857 8 260 4.1E-88 T 22-04-2016 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 PIRSF PIRSF000513 9 262 1.1E-104 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 2.6E-43 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 2.6E-43 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 123 137 2.6E-43 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 2.6E-43 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 2.6E-43 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 2.6E-43 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 PANTHER PTHR20857:SF19 8 260 4.1E-88 T 22-04-2016 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 262 30.324 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 Gene3D G3DSA:3.40.1190.20 9 260 5.1E-87 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 15 261 4.5E-100 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 SUPERFAMILY SSF53613 13 260 1.96E-61 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS11780 2dc1dad1d0c2c847261e6180cf972fc1 262 Pfam PF02110 Hydroxyethylthiazole kinase family 15 259 2.2E-104 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS08250 8a61da652a6c398a6e99755b0d464057 561 Gene3D G3DSA:3.40.50.300 368 557 3.3E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS08250 8a61da652a6c398a6e99755b0d464057 561 PANTHER PTHR11384:SF3 12 531 1.8E-177 T 22-04-2016 APECO1_RS08250 8a61da652a6c398a6e99755b0d464057 561 Gene3D G3DSA:1.20.1560.10 32 350 1.2E-11 T 22-04-2016 APECO1_RS08250 8a61da652a6c398a6e99755b0d464057 561 PANTHER PTHR11384 12 531 1.8E-177 T 22-04-2016 APECO1_RS08250 8a61da652a6c398a6e99755b0d464057 561 SUPERFAMILY SSF52540 360 557 2.57E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS08250 8a61da652a6c398a6e99755b0d464057 561 Pfam PF00005 ABC transporter 383 515 1.2E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS08250 8a61da652a6c398a6e99755b0d464057 561 SUPERFAMILY SSF90123 24 349 5.76E-20 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS08250 8a61da652a6c398a6e99755b0d464057 561 Pfam PF06472 ABC transporter transmembrane region 2 15 301 3.0E-48 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS08250 8a61da652a6c398a6e99755b0d464057 561 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS17735 74c763abf8567dfb6f4f83a4e0a31454 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.238 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS17735 74c763abf8567dfb6f4f83a4e0a31454 217 PANTHER PTHR21327:SF15 1 215 1.4E-164 T 22-04-2016 APECO1_RS17735 74c763abf8567dfb6f4f83a4e0a31454 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 1.5E-86 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS17735 74c763abf8567dfb6f4f83a4e0a31454 217 SUPERFAMILY SSF55821 7 213 5.95E-86 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APECO1_RS17735 74c763abf8567dfb6f4f83a4e0a31454 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 1.5E-82 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS17735 74c763abf8567dfb6f4f83a4e0a31454 217 Gene3D G3DSA:3.90.870.10 10 214 5.3E-95 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APECO1_RS17735 74c763abf8567dfb6f4f83a4e0a31454 217 PANTHER PTHR21327 1 215 1.4E-164 T 22-04-2016 APECO1_RS06215 2a608b3c2513c56feb3d1e8b26dfc719 231 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 128 227 5.8E-30 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 APECO1_RS06215 2a608b3c2513c56feb3d1e8b26dfc719 231 Gene3D G3DSA:2.160.20.70 114 230 5.2E-37 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 APECO1_RS06215 2a608b3c2513c56feb3d1e8b26dfc719 231 SUPERFAMILY SSF63848 125 230 3.53E-29 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 APECO1_RS06215 2a608b3c2513c56feb3d1e8b26dfc719 231 PANTHER PTHR34108 3 231 3.5E-78 T 22-04-2016 APECO1_RS06215 2a608b3c2513c56feb3d1e8b26dfc719 231 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 231 29.141 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 APECO1_RS06215 2a608b3c2513c56feb3d1e8b26dfc719 231 PANTHER PTHR34108:SF1 3 231 3.5E-78 T 22-04-2016 APECO1_RS06215 2a608b3c2513c56feb3d1e8b26dfc719 231 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 2.1E-40 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 APECO1_RS06215 2a608b3c2513c56feb3d1e8b26dfc719 231 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 230 3.7E-71 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 APECO1_RS06590 6e30b3781d8775e9374b1e8aebaa0169 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 1.0E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS06590 6e30b3781d8775e9374b1e8aebaa0169 302 Gene3D G3DSA:1.10.3720.10 102 299 4.9E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS06590 6e30b3781d8775e9374b1e8aebaa0169 302 PANTHER PTHR30465 17 302 2.8E-143 T 22-04-2016 APECO1_RS06590 6e30b3781d8775e9374b1e8aebaa0169 302 PANTHER PTHR30465:SF9 17 302 2.8E-143 T 22-04-2016 APECO1_RS06590 6e30b3781d8775e9374b1e8aebaa0169 302 SUPERFAMILY SSF161098 100 283 3.92E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS06590 6e30b3781d8775e9374b1e8aebaa0169 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 2.5E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.4E-24 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF51206 8 136 1.07E-35 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:2.60.120.10 6 143 1.1E-44 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 SMART SM00419 160 208 4.5E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 SMART SM00100 2 122 7.6E-27 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 PANTHER PTHR24567:SF27 1 207 1.5E-156 T 22-04-2016 APECO1_RS19270 9a58754a5c561c0784b75360a962f090 210 PANTHER PTHR24567 1 207 1.5E-156 T 22-04-2016 APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 PANTHER PTHR11609:SF7 1 381 9.5E-227 T 22-04-2016 APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 SUPERFAMILY SSF56059 113 314 8.49E-56 T 22-04-2016 APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 Gene3D G3DSA:3.30.1490.20 123 199 7.6E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 Gene3D G3DSA:3.40.50.20 5 120 2.1E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 PANTHER PTHR11609 1 381 9.5E-227 T 22-04-2016 APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 52.346 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 Gene3D G3DSA:3.30.470.20 200 388 1.2E-67 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 SUPERFAMILY SSF52440 3 112 1.35E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 SUPERFAMILY SSF51246 319 391 3.3E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 Pfam PF02222 ATP-grasp domain 123 295 1.2E-56 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APECO1_RS09905 311fe91ddd6938813665fd9bd07ab852 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 391 1.0E-195 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 APECO1_RS08415 d4c665adc3c96d0caf1203b9bb56ba74 103 Gene3D G3DSA:1.20.58.80 4 102 7.4E-36 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS08415 d4c665adc3c96d0caf1203b9bb56ba74 103 PANTHER PTHR34382:SF2 5 102 2.0E-33 T 22-04-2016 APECO1_RS08415 d4c665adc3c96d0caf1203b9bb56ba74 103 PIRSF PIRSF000699 2 103 7.6E-31 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS08415 d4c665adc3c96d0caf1203b9bb56ba74 103 PANTHER PTHR34382 5 102 2.0E-33 T 22-04-2016 APECO1_RS08415 d4c665adc3c96d0caf1203b9bb56ba74 103 SUPERFAMILY SSF46973 4 99 2.35E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS08415 d4c665adc3c96d0caf1203b9bb56ba74 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 4.9E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 SUPERFAMILY SSF46785 15 73 5.67E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 SMART SM01134 83 242 6.3E-17 T 22-04-2016 APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 SUPERFAMILY SSF100950 90 216 2.56E-8 T 22-04-2016 APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 SMART SM00420 16 68 2.9E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 Pfam PF08220 DeoR-like helix-turn-helix domain 16 67 5.8E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 Gene3D G3DSA:1.10.10.10 12 62 6.4E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 PANTHER PTHR30363 10 270 3.9E-54 T 22-04-2016 APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 Gene3D G3DSA:3.30.750.70 88 133 3.1E-7 T 22-04-2016 APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 Pfam PF00455 DeoR C terminal sensor domain 88 218 7.5E-16 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS18735 b71ca11d24f1712839a77893db08b676 276 PANTHER PTHR30363:SF11 10 270 3.9E-54 T 22-04-2016 APECO1_RS19065 af999efcbd0a2375432bf21906bd585c 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.6E-75 T 22-04-2016 IPR013005 50S ribosomal protein uL4 APECO1_RS19065 af999efcbd0a2375432bf21906bd585c 201 PANTHER PTHR10746 11 200 1.1E-93 T 22-04-2016 IPR013005 50S ribosomal protein uL4 APECO1_RS19065 af999efcbd0a2375432bf21906bd585c 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.976 T 22-04-2016 IPR013005 50S ribosomal protein uL4 APECO1_RS19065 af999efcbd0a2375432bf21906bd585c 201 Gene3D G3DSA:3.40.1370.10 54 201 2.5E-59 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APECO1_RS19065 af999efcbd0a2375432bf21906bd585c 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.0E-64 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APECO1_RS19065 af999efcbd0a2375432bf21906bd585c 201 SUPERFAMILY SSF52166 10 200 7.06E-73 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 Pfam PF13378 Enolase C-terminal domain-like 194 379 2.2E-42 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 Gene3D G3DSA:3.20.20.120 120 367 8.8E-87 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 110 3.4E-35 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 SUPERFAMILY SSF54826 1 112 8.06E-34 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 PANTHER PTHR13794:SF61 1 148 3.7E-293 T 22-04-2016 APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 PANTHER PTHR13794:SF61 183 404 3.7E-293 T 22-04-2016 APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 Gene3D G3DSA:3.30.390.10 1 119 5.5E-52 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 SUPERFAMILY SSF51604 98 388 3.54E-79 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 PANTHER PTHR13794 1 148 3.7E-293 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 PANTHER PTHR13794 183 404 3.7E-293 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS08495 d35e3e95e6a23eaaa62ce3f80ddb29a0 404 SMART SM00922 128 259 1.1E-14 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 PANTHER PTHR10947 2 794 0.0 T 22-04-2016 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Gene3D G3DSA:3.30.56.10 1 38 2.5E-27 T 22-04-2016 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Gene3D G3DSA:3.30.56.10 155 183 2.5E-27 T 22-04-2016 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Gene3D G3DSA:3.30.56.20 402 475 2.2E-29 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 PANTHER PTHR10947:SF0 2 794 0.0 T 22-04-2016 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 8.0E-21 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 SUPERFAMILY SSF56037 197 393 1.12E-78 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 50.166 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 SMART SM00896 701 794 9.7E-46 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Gene3D G3DSA:3.30.930.10 496 690 5.8E-66 T 22-04-2016 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 SMART SM00873 212 385 1.0E-101 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 SUPERFAMILY SSF50249 35 197 1.25E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.5E-303 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Gene3D G3DSA:3.50.40.10 198 392 1.6E-87 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 SMART SM00874 403 471 1.2E-31 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.4E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 SUPERFAMILY SSF54991 696 794 5.23E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 SUPERFAMILY SSF46955 403 475 2.93E-21 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.1E-27 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Pfam PF03483 B3/4 domain 212 385 4.3E-72 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Gene3D G3DSA:3.30.70.380 703 794 1.8E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 SUPERFAMILY SSF55681 467 690 2.53E-55 T 22-04-2016 APECO1_RS09195 ead2ff694829a88d825d99b38214ff06 795 Gene3D G3DSA:2.40.50.140 42 154 2.2E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS16220 20b0a2ace7c1b0fa7b4be297dafb52c7 397 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 39.428 T 22-04-2016 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 APECO1_RS16220 20b0a2ace7c1b0fa7b4be297dafb52c7 397 SUPERFAMILY SSF103473 16 396 3.79E-21 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS16220 20b0a2ace7c1b0fa7b4be297dafb52c7 397 Pfam PF07690 Major Facilitator Superfamily 20 354 6.4E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS16220 20b0a2ace7c1b0fa7b4be297dafb52c7 397 Gene3D G3DSA:1.20.1250.20 18 186 5.4E-10 T 22-04-2016 APECO1_RS16220 20b0a2ace7c1b0fa7b4be297dafb52c7 397 PANTHER PTHR23513 1 397 1.5E-211 T 22-04-2016 APECO1_RS16220 20b0a2ace7c1b0fa7b4be297dafb52c7 397 PANTHER PTHR23513:SF8 1 397 1.5E-211 T 22-04-2016 APECO1_RS19910 17128065d1de22f281602664e376f825 524 Gene3D G3DSA:3.40.190.10 128 281 2.6E-40 T 22-04-2016 APECO1_RS19910 17128065d1de22f281602664e376f825 524 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 22 520 1.9E-253 T 22-04-2016 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 APECO1_RS19910 17128065d1de22f281602664e376f825 524 PANTHER PTHR30290:SF9 22 509 5.7E-145 T 22-04-2016 APECO1_RS19910 17128065d1de22f281602664e376f825 524 PIRSF PIRSF002741 20 520 2.3E-90 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APECO1_RS19910 17128065d1de22f281602664e376f825 524 SUPERFAMILY SSF53850 27 517 7.24E-130 T 22-04-2016 APECO1_RS19910 17128065d1de22f281602664e376f825 524 PANTHER PTHR30290 22 509 5.7E-145 T 22-04-2016 APECO1_RS19910 17128065d1de22f281602664e376f825 524 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 73 95 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site APECO1_RS19910 17128065d1de22f281602664e376f825 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 433 3.8E-93 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS19910 17128065d1de22f281602664e376f825 524 Gene3D G3DSA:3.10.105.10 282 490 2.1E-48 T 22-04-2016 APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 PANTHER PTHR11732:SF236 1 287 3.1E-134 T 22-04-2016 APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 SUPERFAMILY SSF51430 5 265 4.32E-81 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 Gene3D G3DSA:3.20.20.100 5 267 5.5E-90 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 PRINTS PR00069 Aldo-keto reductase signature 125 142 6.5E-39 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 PRINTS PR00069 Aldo-keto reductase signature 35 59 6.5E-39 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 PRINTS PR00069 Aldo-keto reductase signature 159 188 6.5E-39 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 PRINTS PR00069 Aldo-keto reductase signature 96 114 6.5E-39 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 PRINTS PR00069 Aldo-keto reductase signature 198 222 6.5E-39 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 Pfam PF00248 Aldo/keto reductase family 18 262 7.8E-40 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 PANTHER PTHR11732 1 287 3.1E-134 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APECO1_RS01590 65c3383ca40f924d82c42e1a3d3f1269 289 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 231 246 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APECO1_RS19455 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PIRSF PIRSF016821 6 133 5.3E-41 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 APECO1_RS19455 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 SUPERFAMILY SSF55174 7 103 4.32E-31 T 22-04-2016 APECO1_RS19455 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 Gene3D G3DSA:3.10.290.10 7 103 4.0E-39 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS19455 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 SMART SM00363 9 72 1.2E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS19455 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 Pfam PF01479 S4 domain 9 53 2.8E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS19455 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PANTHER PTHR11079 109 115 7.6E-33 T 22-04-2016 APECO1_RS19455 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PANTHER PTHR11079 1 62 7.6E-33 T 22-04-2016 APECO1_RS19455 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PANTHER PTHR11079:SF70 109 115 7.6E-33 T 22-04-2016 APECO1_RS19455 ffd3ae488feb0a7b0ad90f4f5fa81c8d 133 PANTHER PTHR11079:SF70 1 62 7.6E-33 T 22-04-2016 APECO1_RS18605 1062621ed99d416d9d264916ad240b05 90 SUPERFAMILY SSF52038 1 89 2.75E-30 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) APECO1_RS18605 1062621ed99d416d9d264916ad240b05 90 Pfam PF01337 Barstar (barnase inhibitor) 5 79 5.3E-5 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) APECO1_RS18605 1062621ed99d416d9d264916ad240b05 90 Gene3D G3DSA:3.30.370.10 1 85 1.4E-14 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) APECO1_RS02960 69d2acb8dbc87a10f4e9953abd9e8e59 142 Pfam PF00582 Universal stress protein family 1 142 6.2E-28 T 22-04-2016 IPR006016 UspA GO:0006950 APECO1_RS02960 69d2acb8dbc87a10f4e9953abd9e8e59 142 PANTHER PTHR31964:SF48 1 142 5.9E-101 T 22-04-2016 APECO1_RS02960 69d2acb8dbc87a10f4e9953abd9e8e59 142 PANTHER PTHR31964 1 142 5.9E-101 T 22-04-2016 APECO1_RS02960 69d2acb8dbc87a10f4e9953abd9e8e59 142 Gene3D G3DSA:3.40.50.620 2 142 4.4E-29 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS02960 69d2acb8dbc87a10f4e9953abd9e8e59 142 PRINTS PR01438 Universal stress protein signature 103 115 2.1E-14 T 22-04-2016 IPR006015 Universal stress protein A APECO1_RS02960 69d2acb8dbc87a10f4e9953abd9e8e59 142 PRINTS PR01438 Universal stress protein signature 2 20 2.1E-14 T 22-04-2016 IPR006015 Universal stress protein A APECO1_RS02960 69d2acb8dbc87a10f4e9953abd9e8e59 142 PRINTS PR01438 Universal stress protein signature 120 142 2.1E-14 T 22-04-2016 IPR006015 Universal stress protein A APECO1_RS02960 69d2acb8dbc87a10f4e9953abd9e8e59 142 SUPERFAMILY SSF52402 1 142 3.6E-27 T 22-04-2016 APECO1_RS21380 aa0b8ceba636b1e55af3b5c52e1664fb 139 PANTHER PTHR37831 2 139 1.2E-72 T 22-04-2016 APECO1_RS21380 aa0b8ceba636b1e55af3b5c52e1664fb 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 3.0E-48 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 APECO1_RS21380 aa0b8ceba636b1e55af3b5c52e1664fb 139 PANTHER PTHR37831:SF1 2 139 1.2E-72 T 22-04-2016 APECO1_RS21380 aa0b8ceba636b1e55af3b5c52e1664fb 139 Gene3D G3DSA:3.40.1650.10 1 139 1.2E-44 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APECO1_RS21380 aa0b8ceba636b1e55af3b5c52e1664fb 139 SUPERFAMILY SSF102546 1 139 6.02E-45 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APECO1_RS21380 aa0b8ceba636b1e55af3b5c52e1664fb 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.394 T 22-04-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 APECO1_RS25300 be17c180eea93b47934b8d8e57dec12b 129 SUPERFAMILY SSF103084 2 120 1.19E-29 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS25300 be17c180eea93b47934b8d8e57dec12b 129 Gene3D G3DSA:3.30.1330.70 1 123 1.0E-35 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS25300 be17c180eea93b47934b8d8e57dec12b 129 Pfam PF05866 Endodeoxyribonuclease RusA 6 118 2.7E-17 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS25300 be17c180eea93b47934b8d8e57dec12b 129 PIRSF PIRSF001007 1 125 1.1E-48 T 22-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 Gene3D G3DSA:3.20.20.100 5 271 1.7E-103 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 PANTHER PTHR11732 3 274 3.4E-135 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 2.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 2.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 2.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 2.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 2.5E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 Pfam PF00248 Aldo/keto reductase family 201 260 1.5E-9 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 Pfam PF00248 Aldo/keto reductase family 18 192 1.9E-39 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 SUPERFAMILY SSF51430 5 268 8.25E-91 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APECO1_RS17490 83298a0b5a2cbc78a4b74e864109c268 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APECO1_RS02595 a66a45d941e1d601bc3ec900cf594901 484 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 19 457 1.8E-140 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS02595 a66a45d941e1d601bc3ec900cf594901 484 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 14 455 5.8E-137 T 22-04-2016 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0005215|GO:0006810|GO:0016020 APECO1_RS02595 a66a45d941e1d601bc3ec900cf594901 484 PANTHER PTHR30618 1 483 2.1E-171 T 22-04-2016 APECO1_RS02595 a66a45d941e1d601bc3ec900cf594901 484 PANTHER PTHR30618:SF0 1 483 2.1E-171 T 22-04-2016 APECO1_RS20515 d395e73f8705d660a99b15a521b619fb 424 PANTHER PTHR33362:SF9 1 405 2.8E-269 T 22-04-2016 APECO1_RS20515 d395e73f8705d660a99b15a521b619fb 424 PANTHER PTHR33362 1 405 2.8E-269 T 22-04-2016 APECO1_RS20515 d395e73f8705d660a99b15a521b619fb 424 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 408 5.5E-150 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APECO1_RS20515 d395e73f8705d660a99b15a521b619fb 424 PIRSF PIRSF006066 1 415 9.1E-137 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APECO1_RS20515 d395e73f8705d660a99b15a521b619fb 424 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 409 3.7E-127 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 PIRSF PIRSF000980 1 1122 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1087 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 PANTHER PTHR30591 1 1105 0.0 T 22-04-2016 APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 806 0.0 T 22-04-2016 APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 SUPERFAMILY SSF52980 820 1120 9.12E-100 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 Gene3D G3DSA:1.10.10.160 86 183 4.0E-33 T 22-04-2016 IPR013986 DExx box DNA helicase domain APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 SUPERFAMILY SSF52540 1 347 1.27E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 PANTHER PTHR30591:SF1 1 1105 0.0 T 22-04-2016 APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 Gene3D G3DSA:3.40.50.300 657 752 6.7E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 Gene3D G3DSA:3.40.50.300 342 455 6.7E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1122 13.662 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APECO1_RS16145 af8f8e94876816f4612b7574ddc00924 1122 SUPERFAMILY SSF52540 359 813 2.12E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22495 383e03bf261f561890bf9f669c300536 296 SUPERFAMILY SSF51730 22 294 1.55E-96 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like APECO1_RS22495 383e03bf261f561890bf9f669c300536 296 PANTHER PTHR21091 149 280 2.6E-43 T 22-04-2016 APECO1_RS22495 383e03bf261f561890bf9f669c300536 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 9.7E-106 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APECO1_RS22495 383e03bf261f561890bf9f669c300536 296 Gene3D G3DSA:3.20.20.220 13 293 5.4E-108 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like APECO1_RS22495 383e03bf261f561890bf9f669c300536 296 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 7.1E-108 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.40.30.10 105 197 4.5E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 1.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 1.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 1.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 1.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.3E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PIRSF PIRSF000238 1 521 4.8E-263 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 4.1E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 2.0E-240 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PANTHER PTHR22912 199 514 1.2E-217 T 22-04-2016 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.40.30.10 1 94 1.2E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PANTHER PTHR22912:SF107 199 514 1.2E-217 T 22-04-2016 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 3.0E-38 T 22-04-2016 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 3.0E-38 T 22-04-2016 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 3.0E-38 T 22-04-2016 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 3.0E-38 T 22-04-2016 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 3.0E-38 T 22-04-2016 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.50.50.60 213 318 2.6E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 Pfam PF13192 Thioredoxin domain 126 195 3.0E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 SUPERFAMILY SSF52833 106 197 4.33E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 SUPERFAMILY SSF51905 207 514 4.4E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 SUPERFAMILY SSF52833 1 101 2.57E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02955 8eb384eefef133abca428a2f5b50ba71 521 Gene3D G3DSA:3.50.50.60 319 510 4.1E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 SUPERFAMILY SSF50465 272 351 2.48E-7 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.3E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.3E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.3E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.3E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 Pfam PF03144 Elongation factor Tu domain 2 189 256 4.5E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 SUPERFAMILY SSF46785 417 484 3.54E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 SUPERFAMILY SSF46785 488 546 5.92E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 SUPERFAMILY SSF50447 175 293 2.16E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 SUPERFAMILY SSF46785 551 607 6.42E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 Gene3D G3DSA:1.10.10.10 416 481 5.3E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 PANTHER PTHR23115 1 351 1.8E-139 T 22-04-2016 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 Gene3D G3DSA:3.40.50.300 3 163 8.0E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 Pfam PF09107 Elongation factor SelB, winged helix 560 605 1.2E-19 T 22-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 PANTHER PTHR23115:SF129 1 351 1.8E-139 T 22-04-2016 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 Gene3D G3DSA:2.40.30.10 173 296 7.4E-28 T 22-04-2016 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 Pfam PF00009 Elongation factor Tu GTP binding domain 2 163 1.7E-31 T 22-04-2016 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 Pfam PF09106 Elongation factor SelB, winged helix 424 480 7.2E-16 T 22-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 SUPERFAMILY SSF52540 2 165 1.34E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 Gene3D G3DSA:1.10.10.10 548 607 8.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 607 6.7E-277 T 22-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 APECO1_RS20560 15af46432aca7364a5370801ec388d57 614 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APECO1_RS22525 b1296803b82a1388d5beaf574a3ad540 220 Gene3D G3DSA:3.20.20.70 1 214 2.2E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS22525 b1296803b82a1388d5beaf574a3ad540 220 Pfam PF00923 Transaldolase 3 206 1.8E-47 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS22525 b1296803b82a1388d5beaf574a3ad540 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 51.946 T 22-04-2016 IPR023001 Fructose-6-phosphate aldolase GO:0016832 APECO1_RS22525 b1296803b82a1388d5beaf574a3ad540 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS22525 b1296803b82a1388d5beaf574a3ad540 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 6.5E-106 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS22525 b1296803b82a1388d5beaf574a3ad540 220 SUPERFAMILY SSF51569 1 216 7.43E-65 T 22-04-2016 APECO1_RS22525 b1296803b82a1388d5beaf574a3ad540 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS22525 b1296803b82a1388d5beaf574a3ad540 220 PANTHER PTHR10683 1 215 1.8E-158 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS22525 b1296803b82a1388d5beaf574a3ad540 220 PANTHER PTHR10683:SF14 1 215 1.8E-158 T 22-04-2016 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 PANTHER PTHR26312 17 31 3.1E-43 T 22-04-2016 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 PANTHER PTHR26312 155 263 3.1E-43 T 22-04-2016 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 PANTHER PTHR26312:SF74 17 31 3.1E-43 T 22-04-2016 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 PANTHER PTHR26312:SF74 155 263 3.1E-43 T 22-04-2016 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 Pfam PF16331 TolA binding protein trimerisation 37 111 8.3E-25 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 SUPERFAMILY SSF48452 139 254 1.84E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 Pfam PF13174 Tetratricopeptide repeat 218 250 4.8E-7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 Pfam PF13432 Tetratricopeptide repeat 159 214 8.7E-6 T 22-04-2016 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 Gene3D G3DSA:1.25.40.10 64 255 5.9E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS03575 ab46ab383a52c28fe81b64c850bd935f 263 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 3.7E-40 T 22-04-2016 IPR014162 Tol-Pal system, YbgF APECO1_RS19275 b41a024748ae99a054b065928b144710 696 PANTHER PTHR30509:SF4 1 696 0.0 T 22-04-2016 APECO1_RS19275 b41a024748ae99a054b065928b144710 696 PANTHER PTHR30509 1 696 0.0 T 22-04-2016 APECO1_RS19275 b41a024748ae99a054b065928b144710 696 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 675 1.5E-277 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK APECO1_RS19275 b41a024748ae99a054b065928b144710 696 Pfam PF13515 Fusaric acid resistance protein-like 377 498 1.1E-18 T 22-04-2016 APECO1_RS19275 b41a024748ae99a054b065928b144710 696 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 1.3E-74 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal APECO1_RS17965 b829745cab534ca00900fb0c6e45df03 432 PANTHER PTHR11662 1 432 2.6E-297 T 22-04-2016 APECO1_RS17965 b829745cab534ca00900fb0c6e45df03 432 Gene3D G3DSA:1.20.1250.20 216 417 2.4E-21 T 22-04-2016 APECO1_RS17965 b829745cab534ca00900fb0c6e45df03 432 Pfam PF07690 Major Facilitator Superfamily 16 287 1.2E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS17965 b829745cab534ca00900fb0c6e45df03 432 Gene3D G3DSA:1.20.1250.20 7 199 5.9E-44 T 22-04-2016 APECO1_RS17965 b829745cab534ca00900fb0c6e45df03 432 PANTHER PTHR11662:SF285 1 432 2.6E-297 T 22-04-2016 APECO1_RS17965 b829745cab534ca00900fb0c6e45df03 432 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 17 411 1.8E-128 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS17965 b829745cab534ca00900fb0c6e45df03 432 SUPERFAMILY SSF103473 3 412 2.75E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS07160 6c9a34d666b9df3b19ca4d5cc16ae3b2 373 PANTHER PTHR30158 8 369 1.2E-147 T 22-04-2016 APECO1_RS07160 6c9a34d666b9df3b19ca4d5cc16ae3b2 373 PANTHER PTHR30158:SF3 8 369 1.2E-147 T 22-04-2016 APECO1_RS07160 6c9a34d666b9df3b19ca4d5cc16ae3b2 373 Gene3D G3DSA:2.40.50.100 165 198 7.5E-26 T 22-04-2016 APECO1_RS07160 6c9a34d666b9df3b19ca4d5cc16ae3b2 373 Gene3D G3DSA:2.40.50.100 58 90 7.5E-26 T 22-04-2016 APECO1_RS07160 6c9a34d666b9df3b19ca4d5cc16ae3b2 373 SUPERFAMILY SSF111369 45 288 8.63E-80 T 22-04-2016 APECO1_RS07160 6c9a34d666b9df3b19ca4d5cc16ae3b2 373 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 363 2.0E-82 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS07160 6c9a34d666b9df3b19ca4d5cc16ae3b2 373 Pfam PF00529 HlyD membrane-fusion protein of T1SS 32 348 1.7E-7 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS07160 6c9a34d666b9df3b19ca4d5cc16ae3b2 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 281 2.6E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS00905 2a381e1e09c703d61823ce7f7d5643e3 241 Pfam PF00696 Amino acid kinase family 10 219 3.9E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS00905 2a381e1e09c703d61823ce7f7d5643e3 241 PIRSF PIRSF005650 4 241 2.2E-89 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APECO1_RS00905 2a381e1e09c703d61823ce7f7d5643e3 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.437 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APECO1_RS00905 2a381e1e09c703d61823ce7f7d5643e3 241 PANTHER PTHR21499 4 241 6.0E-109 T 22-04-2016 APECO1_RS00905 2a381e1e09c703d61823ce7f7d5643e3 241 PANTHER PTHR21499:SF23 4 241 6.0E-109 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APECO1_RS00905 2a381e1e09c703d61823ce7f7d5643e3 241 Gene3D G3DSA:3.40.1160.10 3 240 1.4E-85 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS00905 2a381e1e09c703d61823ce7f7d5643e3 241 SUPERFAMILY SSF53633 7 240 3.93E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS00905 2a381e1e09c703d61823ce7f7d5643e3 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 7.3E-104 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APECO1_RS20535 e6dec3eceb10f659f217da8b766607ba 286 SUPERFAMILY SSF51658 14 277 6.02E-56 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS20535 e6dec3eceb10f659f217da8b766607ba 286 PANTHER PTHR12110:SF20 1 285 1.2E-119 T 22-04-2016 APECO1_RS20535 e6dec3eceb10f659f217da8b766607ba 286 Pfam PF01261 Xylose isomerase-like TIM barrel 25 234 2.2E-36 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS20535 e6dec3eceb10f659f217da8b766607ba 286 Gene3D G3DSA:3.20.20.150 7 276 3.1E-52 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS20535 e6dec3eceb10f659f217da8b766607ba 286 PANTHER PTHR12110 1 285 1.2E-119 T 22-04-2016 APECO1_RS20535 e6dec3eceb10f659f217da8b766607ba 286 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 2 286 1.5E-157 T 22-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 APECO1_RS20995 7dafd5f2b4bc4b112c1b02d2a7e51636 500 Gene3D G3DSA:3.30.565.10 373 496 4.7E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS20995 7dafd5f2b4bc4b112c1b02d2a7e51636 500 PANTHER PTHR24421 170 498 1.4E-89 T 22-04-2016 APECO1_RS20995 7dafd5f2b4bc4b112c1b02d2a7e51636 500 Pfam PF07730 Histidine kinase 305 370 1.4E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APECO1_RS20995 7dafd5f2b4bc4b112c1b02d2a7e51636 500 Pfam PF05231 MASE1 12 276 1.1E-13 T 22-04-2016 IPR007895 MASE1 APECO1_RS20995 7dafd5f2b4bc4b112c1b02d2a7e51636 500 SUPERFAMILY SSF55874 385 496 2.49E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS20995 7dafd5f2b4bc4b112c1b02d2a7e51636 500 PANTHER PTHR24421:SF1 170 498 1.4E-89 T 22-04-2016 APECO1_RS20995 7dafd5f2b4bc4b112c1b02d2a7e51636 500 SMART SM00387 409 499 6.6E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS20995 7dafd5f2b4bc4b112c1b02d2a7e51636 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 497 3.2E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS08930 d6b8847f5a1839299e61988c292ae7bb 418 SUPERFAMILY SSF51126 40 394 7.22E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS08930 d6b8847f5a1839299e61988c292ae7bb 418 Pfam PF16168 Adhesin of bacterial autotransporter system, probable stalk 99 159 1.3E-20 T 22-04-2016 IPR030930 Adhesin of bacterial autotransporter system APECO1_RS08930 d6b8847f5a1839299e61988c292ae7bb 418 Gene3D G3DSA:2.160.20.20 11 393 8.9E-14 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like APECO1_RS08930 d6b8847f5a1839299e61988c292ae7bb 418 Pfam PF03212 Pertactin 329 403 3.1E-5 T 22-04-2016 IPR004899 Pertactin, central region APECO1_RS08930 d6b8847f5a1839299e61988c292ae7bb 418 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 149 179 5.9E-5 T 22-04-2016 IPR030930 Adhesin of bacterial autotransporter system APECO1_RS17565 ab00e8e8c49277851a759ca0df2364c0 160 SMART SM00871 6 160 4.0E-31 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding APECO1_RS17565 ab00e8e8c49277851a759ca0df2364c0 160 PANTHER PTHR40055 1 160 1.4E-69 T 22-04-2016 APECO1_RS17565 ab00e8e8c49277851a759ca0df2364c0 160 Pfam PF06445 GyrI-like small molecule binding domain 7 159 4.4E-31 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain APECO1_RS17565 ab00e8e8c49277851a759ca0df2364c0 160 PANTHER PTHR40055:SF1 1 160 1.4E-69 T 22-04-2016 APECO1_RS17565 ab00e8e8c49277851a759ca0df2364c0 160 Gene3D G3DSA:3.20.80.10 7 159 2.6E-43 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APECO1_RS17565 ab00e8e8c49277851a759ca0df2364c0 160 SUPERFAMILY SSF55136 7 159 6.63E-32 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APECO1_RS09175 71a6e1b789e0850982046f8ff74443d3 249 Gene3D G3DSA:3.40.50.300 16 228 4.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09175 71a6e1b789e0850982046f8ff74443d3 249 PANTHER PTHR24220 2 246 2.1E-158 T 22-04-2016 APECO1_RS09175 71a6e1b789e0850982046f8ff74443d3 249 Pfam PF00005 ABC transporter 18 162 2.0E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS09175 71a6e1b789e0850982046f8ff74443d3 249 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 5 248 46.867 T 22-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 APECO1_RS09175 71a6e1b789e0850982046f8ff74443d3 249 SMART SM00382 25 210 9.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS09175 71a6e1b789e0850982046f8ff74443d3 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS09175 71a6e1b789e0850982046f8ff74443d3 249 SUPERFAMILY SSF52540 14 223 1.31E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09175 71a6e1b789e0850982046f8ff74443d3 249 PANTHER PTHR24220:SF462 2 246 2.1E-158 T 22-04-2016 APECO1_RS18095 7fc82bb2a87af639adc6313eb10fa614 256 PANTHER PTHR30502:SF4 1 255 3.1E-222 T 22-04-2016 APECO1_RS18095 7fc82bb2a87af639adc6313eb10fa614 256 Gene3D G3DSA:3.20.20.60 6 255 1.8E-79 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS18095 7fc82bb2a87af639adc6313eb10fa614 256 PANTHER PTHR30502 1 255 3.1E-222 T 22-04-2016 APECO1_RS18095 7fc82bb2a87af639adc6313eb10fa614 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 69.085 T 22-04-2016 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20|UniPathway: UPA00565 APECO1_RS18095 7fc82bb2a87af639adc6313eb10fa614 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 5.9E-149 T 22-04-2016 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20|UniPathway: UPA00565 APECO1_RS18095 7fc82bb2a87af639adc6313eb10fa614 256 SUPERFAMILY SSF51621 4 255 1.6E-82 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS18095 7fc82bb2a87af639adc6313eb10fa614 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 245 3.7E-63 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 APECO1_RS25435 0d8f5cd8d283d8df76cd761f33250ddf 1021 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 811 885 7.9E-22 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS25435 0d8f5cd8d283d8df76cd761f33250ddf 1021 Pfam PF06791 Prophage tail length tape measure protein 228 426 1.2E-51 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal APECO1_RS25435 0d8f5cd8d283d8df76cd761f33250ddf 1021 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 656 981 2.7E-85 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS01770 53db7032236d958f2e83b618051f2c49 210 PIRSF PIRSF006324 1 207 3.4E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS01770 53db7032236d958f2e83b618051f2c49 210 PANTHER PTHR30086 2 210 8.4E-177 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS01770 53db7032236d958f2e83b618051f2c49 210 PANTHER PTHR30086:SF11 2 210 8.4E-177 T 22-04-2016 APECO1_RS01770 53db7032236d958f2e83b618051f2c49 210 Pfam PF01810 LysE type translocator 16 206 7.1E-57 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS01770 53db7032236d958f2e83b618051f2c49 210 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 20 202 1.6E-71 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 APECO1_RS02265 7fbf79b632f98396294e716928831512 566 Gene3D G3DSA:3.90.76.10 133 274 1.2E-20 T 22-04-2016 APECO1_RS02265 7fbf79b632f98396294e716928831512 566 Gene3D G3DSA:3.10.105.10 405 533 9.3E-5 T 22-04-2016 APECO1_RS02265 7fbf79b632f98396294e716928831512 566 PANTHER PTHR30290:SF19 120 562 0.0 T 22-04-2016 APECO1_RS02265 7fbf79b632f98396294e716928831512 566 PANTHER PTHR30290:SF19 22 82 0.0 T 22-04-2016 APECO1_RS02265 7fbf79b632f98396294e716928831512 566 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 3.0E-39 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain APECO1_RS02265 7fbf79b632f98396294e716928831512 566 PANTHER PTHR30290 120 562 0.0 T 22-04-2016 APECO1_RS02265 7fbf79b632f98396294e716928831512 566 PANTHER PTHR30290 22 82 0.0 T 22-04-2016 APECO1_RS02265 7fbf79b632f98396294e716928831512 566 SUPERFAMILY SSF53850 115 561 5.79E-56 T 22-04-2016 APECO1_RS02265 7fbf79b632f98396294e716928831512 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 303 1.4E-15 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS11130 0d58131402ed4eaf202753c8aafd566b 159 Pfam PF03230 Antirestriction protein 64 159 8.1E-37 T 22-04-2016 IPR004914 Antirestriction protein APECO1_RS11130 0d58131402ed4eaf202753c8aafd566b 159 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 62 159 2.0E-54 T 22-04-2016 IPR004914 Antirestriction protein APECO1_RS19245 23e0dcfb68f56d9aaaaed7c3bb0a8a3a 340 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 239 280 - T 22-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- APECO1_RS19245 23e0dcfb68f56d9aaaaed7c3bb0a8a3a 340 PANTHER PTHR10794:SF46 18 336 7.6E-95 T 22-04-2016 APECO1_RS19245 23e0dcfb68f56d9aaaaed7c3bb0a8a3a 340 PIRSF PIRSF005211 4 340 4.7E-111 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- APECO1_RS19245 23e0dcfb68f56d9aaaaed7c3bb0a8a3a 340 Gene3D G3DSA:3.40.50.1820 260 336 4.2E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS19245 23e0dcfb68f56d9aaaaed7c3bb0a8a3a 340 Gene3D G3DSA:3.40.50.1820 55 184 4.2E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS19245 23e0dcfb68f56d9aaaaed7c3bb0a8a3a 340 SUPERFAMILY SSF53474 38 312 1.15E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS19245 23e0dcfb68f56d9aaaaed7c3bb0a8a3a 340 PANTHER PTHR10794 18 336 7.6E-95 T 22-04-2016 APECO1_RS19245 23e0dcfb68f56d9aaaaed7c3bb0a8a3a 340 Pfam PF00561 alpha/beta hydrolase fold 73 312 8.1E-30 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS07495 12ce7fe56cd680d1958239f91b232f9f 139 Pfam PF01381 Helix-turn-helix 21 75 2.1E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS07495 12ce7fe56cd680d1958239f91b232f9f 139 PANTHER PTHR10245 1 117 7.4E-12 T 22-04-2016 APECO1_RS07495 12ce7fe56cd680d1958239f91b232f9f 139 Gene3D G3DSA:1.10.260.40 17 114 2.1E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS07495 12ce7fe56cd680d1958239f91b232f9f 139 SUPERFAMILY SSF47413 17 77 3.22E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS07495 12ce7fe56cd680d1958239f91b232f9f 139 SMART SM00530 20 75 1.8E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 SUPERFAMILY SSF49354 24 141 8.37E-36 T 22-04-2016 IPR008962 PapD-like APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 Gene3D G3DSA:2.60.40.1070 152 231 1.6E-21 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 Gene3D G3DSA:2.60.40.360 24 141 4.6E-41 T 22-04-2016 IPR008962 PapD-like APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 222 1.6E-9 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 4.7E-35 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 PANTHER PTHR30251:SF5 10 232 1.5E-101 T 22-04-2016 APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 PANTHER PTHR30251 10 232 1.5E-101 T 22-04-2016 APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 SUPERFAMILY SSF49584 152 231 1.18E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 PRINTS PR00969 Pili chaperone signature 100 117 1.9E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 PRINTS PR00969 Pili chaperone signature 24 33 1.9E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 PRINTS PR00969 Pili chaperone signature 70 91 1.9E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 PRINTS PR00969 Pili chaperone signature 123 138 1.9E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS17725 427e234a3feac9850341cd89a5d9e196 246 PRINTS PR00969 Pili chaperone signature 160 175 1.9E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS15460 3c750834f386e4a2c26db9452310f9aa 139 SUPERFAMILY SSF47413 83 139 5.35E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS15460 3c750834f386e4a2c26db9452310f9aa 139 PANTHER PTHR40455 1 139 1.2E-31 T 22-04-2016 APECO1_RS15460 3c750834f386e4a2c26db9452310f9aa 139 Gene3D G3DSA:1.10.260.40 77 139 2.7E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS15460 3c750834f386e4a2c26db9452310f9aa 139 SMART SM00530 84 138 9.4E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS15460 3c750834f386e4a2c26db9452310f9aa 139 PANTHER PTHR40455:SF1 1 139 1.2E-31 T 22-04-2016 APECO1_RS15460 3c750834f386e4a2c26db9452310f9aa 139 Pfam PF01381 Helix-turn-helix 85 138 7.8E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS03800 708230ee3709c47087a57b470028490b 81 Pfam PF02597 ThiS family 4 81 3.2E-22 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APECO1_RS03800 708230ee3709c47087a57b470028490b 81 Gene3D G3DSA:3.10.20.30 1 81 6.1E-26 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS03800 708230ee3709c47087a57b470028490b 81 SUPERFAMILY SSF54285 1 81 1.07E-23 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APECO1_RS03800 708230ee3709c47087a57b470028490b 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 2.9E-24 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 APECO1_RS03800 708230ee3709c47087a57b470028490b 81 PANTHER PTHR33359 1 81 2.6E-27 T 22-04-2016 APECO1_RS20100 4cc798cbefa7bb526841deedf3aae1c4 330 Gene3D G3DSA:1.10.3470.10 8 328 3.6E-107 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS20100 4cc798cbefa7bb526841deedf3aae1c4 330 SUPERFAMILY SSF81345 9 326 3.53E-86 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS20100 4cc798cbefa7bb526841deedf3aae1c4 330 PANTHER PTHR30472 11 330 1.2E-138 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS20100 4cc798cbefa7bb526841deedf3aae1c4 330 PANTHER PTHR30472:SF3 11 330 1.2E-138 T 22-04-2016 APECO1_RS20100 4cc798cbefa7bb526841deedf3aae1c4 330 Pfam PF01032 FecCD transport family 18 325 9.3E-95 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS23885 636fae613bc8f291be23cccce28206cd 252 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 11 248 7.5E-116 T 22-04-2016 IPR013366 Ethanolamine utilisation EutJ UniPathway: UPA00560 APECO1_RS23885 636fae613bc8f291be23cccce28206cd 252 PANTHER PTHR32432 13 247 4.1E-33 T 22-04-2016 APECO1_RS23885 636fae613bc8f291be23cccce28206cd 252 Gene3D G3DSA:3.30.420.40 13 128 7.6E-26 T 22-04-2016 APECO1_RS23885 636fae613bc8f291be23cccce28206cd 252 SUPERFAMILY SSF53067 11 114 1.3E-13 T 22-04-2016 APECO1_RS23885 636fae613bc8f291be23cccce28206cd 252 SUPERFAMILY SSF53067 119 249 1.17E-21 T 22-04-2016 APECO1_RS23885 636fae613bc8f291be23cccce28206cd 252 Gene3D G3DSA:3.30.420.40 129 231 3.7E-31 T 22-04-2016 APECO1_RS23885 636fae613bc8f291be23cccce28206cd 252 Pfam PF06723 MreB/Mbl protein 41 157 3.2E-11 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APECO1_RS20685 5ee3497d4aadebaab4293c0b3048e124 344 Pfam PF00535 Glycosyl transferase family 2 9 137 2.7E-34 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS20685 5ee3497d4aadebaab4293c0b3048e124 344 Gene3D G3DSA:3.90.550.10 3 207 1.7E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS20685 5ee3497d4aadebaab4293c0b3048e124 344 PANTHER PTHR22916:SF24 1 344 1.3E-141 T 22-04-2016 APECO1_RS20685 5ee3497d4aadebaab4293c0b3048e124 344 PANTHER PTHR22916 1 344 1.3E-141 T 22-04-2016 APECO1_RS20685 5ee3497d4aadebaab4293c0b3048e124 344 SUPERFAMILY SSF53448 7 224 5.44E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11210 07c98cd831a14dc49b85fd45101353b1 309 SUPERFAMILY SSF53850 90 292 1.54E-26 T 22-04-2016 APECO1_RS11210 07c98cd831a14dc49b85fd45101353b1 309 Pfam PF03466 LysR substrate binding domain 89 291 1.0E-24 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS11210 07c98cd831a14dc49b85fd45101353b1 309 PANTHER PTHR30126:SF4 2 307 2.3E-208 T 22-04-2016 APECO1_RS11210 07c98cd831a14dc49b85fd45101353b1 309 Gene3D G3DSA:3.40.190.10 90 213 8.9E-16 T 22-04-2016 APECO1_RS11210 07c98cd831a14dc49b85fd45101353b1 309 PANTHER PTHR30126 2 307 2.3E-208 T 22-04-2016 APECO1_RS11210 07c98cd831a14dc49b85fd45101353b1 309 Gene3D G3DSA:1.10.10.10 6 86 2.7E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11210 07c98cd831a14dc49b85fd45101353b1 309 SUPERFAMILY SSF46785 5 88 4.08E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11210 07c98cd831a14dc49b85fd45101353b1 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.6E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.6E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 SUPERFAMILY SSF48498 87 212 4.05E-42 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 212 1.2E-58 T 22-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 TIGRFAM TIGR03613 RutR: pyrimidine utilization regulatory protein R 11 212 3.8E-116 T 22-04-2016 IPR019915 Transcription regulator, pyrimidine utilisation, RutR APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 Gene3D G3DSA:1.10.357.10 79 212 2.4E-59 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 PANTHER PTHR30055 6 174 1.1E-76 T 22-04-2016 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 Gene3D G3DSA:1.10.10.60 10 52 2.0E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 Gene3D G3DSA:1.10.10.60 53 78 7.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 6.2E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 PANTHER PTHR30055:SF53 6 174 1.1E-76 T 22-04-2016 APECO1_RS05125 f6ba254ddcdaef4e8608410e60e1b066 212 SUPERFAMILY SSF46689 13 90 1.25E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS03760 53d6792bf512de722410e7a18aa7ab39 251 Pfam PF08241 Methyltransferase domain 47 138 5.6E-24 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APECO1_RS03760 53d6792bf512de722410e7a18aa7ab39 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 249 1.5E-77 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 APECO1_RS03760 53d6792bf512de722410e7a18aa7ab39 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 31.882 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 APECO1_RS03760 53d6792bf512de722410e7a18aa7ab39 251 PANTHER PTHR10108:SF855 12 175 6.3E-53 T 22-04-2016 APECO1_RS03760 53d6792bf512de722410e7a18aa7ab39 251 PANTHER PTHR10108 12 175 6.3E-53 T 22-04-2016 APECO1_RS03760 53d6792bf512de722410e7a18aa7ab39 251 Gene3D G3DSA:3.40.50.150 10 201 3.3E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS03760 53d6792bf512de722410e7a18aa7ab39 251 SUPERFAMILY SSF53335 10 244 5.31E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 PANTHER PTHR22572:SF115 7 449 3.2E-234 T 22-04-2016 APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 Pfam PF12804 MobA-like NTP transferase domain 8 122 3.0E-20 T 22-04-2016 IPR025877 MobA-like NTP transferase APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 Gene3D G3DSA:2.160.10.10 325 455 6.8E-34 T 22-04-2016 APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 Gene3D G3DSA:3.90.550.10 3 244 2.6E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 Gene3D G3DSA:2.160.10.10 245 324 8.1E-19 T 22-04-2016 APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 382 0.0029 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 5.9E-6 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.2E-7 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 5.8E-208 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 SUPERFAMILY SSF53448 5 252 7.09E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.129 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 SUPERFAMILY SSF51161 255 438 2.62E-51 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS21290 e042bb547f3f8fb483ffbd76c0fe1e49 456 PANTHER PTHR22572 7 449 3.2E-234 T 22-04-2016 APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 388 7.7E-88 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 Gene3D G3DSA:3.40.50.970 7 175 3.9E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 Gene3D G3DSA:3.40.50.970 344 547 5.1E-32 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 1.2E-139 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.762 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 PIRSF PIRSF004983 1 556 6.6E-187 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 535 5.5E-9 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 SUPERFAMILY SSF52518 367 552 1.82E-34 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 PANTHER PTHR18968 1 554 2.3E-238 T 22-04-2016 APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 SUPERFAMILY SSF52518 7 175 1.02E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 141 6.9E-27 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APECO1_RS12620 c09e2a359538182adfca538b63d5a0ec 556 PANTHER PTHR18968:SF114 1 554 2.3E-238 T 22-04-2016 APECO1_RS01120 689d88b686145dfa1ae813a2c0d2a774 240 Gene3D G3DSA:3.40.50.150 77 206 5.6E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS01120 689d88b686145dfa1ae813a2c0d2a774 240 PANTHER PTHR10108:SF836 77 219 4.5E-94 T 22-04-2016 APECO1_RS01120 689d88b686145dfa1ae813a2c0d2a774 240 SUPERFAMILY SSF53335 77 203 3.96E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS01120 689d88b686145dfa1ae813a2c0d2a774 240 PANTHER PTHR10108 77 219 4.5E-94 T 22-04-2016 APECO1_RS01120 689d88b686145dfa1ae813a2c0d2a774 240 Pfam PF08241 Methyltransferase domain 71 125 3.7E-11 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APECO1_RS12545 3926941b125dc477463ad67192abbf6a 180 SUPERFAMILY SSF56925 56 177 3.61E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS12545 3926941b125dc477463ad67192abbf6a 180 Pfam PF07437 YfaZ precursor 1 180 6.3E-89 T 22-04-2016 IPR009998 YfaZ APECO1_RS12545 3926941b125dc477463ad67192abbf6a 180 Gene3D G3DSA:2.40.160.10 13 180 3.8E-9 T 22-04-2016 IPR023614 Porin domain APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 SUPERFAMILY SSF46894 134 196 6.12E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 PANTHER PTHR26402:SF511 1 194 5.6E-21 T 22-04-2016 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 2.2E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 PANTHER PTHR26402 1 194 5.6E-21 T 22-04-2016 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.11E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.11E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.11E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 SMART SM00421 139 196 5.8E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 Gene3D G3DSA:3.40.50.2300 1 120 2.5E-4 T 22-04-2016 APECO1_RS20175 502dc9b5ab77da12a19fac10a1a39272 200 Gene3D G3DSA:1.10.10.10 133 195 1.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07955 275d3bf2701171b81eaa5f5fffbb3d9f 197 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 1 196 1.2E-113 T 22-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 APECO1_RS07955 275d3bf2701171b81eaa5f5fffbb3d9f 197 PANTHER PTHR10108:SF927 5 193 1.3E-88 T 22-04-2016 APECO1_RS07955 275d3bf2701171b81eaa5f5fffbb3d9f 197 SUPERFAMILY SSF53335 7 196 3.72E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS07955 275d3bf2701171b81eaa5f5fffbb3d9f 197 Gene3D G3DSA:3.40.50.150 7 196 1.9E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS07955 275d3bf2701171b81eaa5f5fffbb3d9f 197 Pfam PF03848 Tellurite resistance protein TehB 1 193 2.4E-110 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain APECO1_RS07955 275d3bf2701171b81eaa5f5fffbb3d9f 197 PANTHER PTHR10108 5 193 1.3E-88 T 22-04-2016 APECO1_RS21090 3467fb6457d6458f5fe7b7eeca1a73f4 430 PANTHER PTHR11662 2 423 4.0E-178 T 22-04-2016 APECO1_RS21090 3467fb6457d6458f5fe7b7eeca1a73f4 430 PANTHER PTHR11662:SF277 2 423 4.0E-178 T 22-04-2016 APECO1_RS21090 3467fb6457d6458f5fe7b7eeca1a73f4 430 Gene3D G3DSA:1.20.1250.20 234 425 2.9E-27 T 22-04-2016 APECO1_RS21090 3467fb6457d6458f5fe7b7eeca1a73f4 430 SUPERFAMILY SSF103473 7 426 1.83E-83 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS21090 3467fb6457d6458f5fe7b7eeca1a73f4 430 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 22 405 5.2E-134 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS21090 3467fb6457d6458f5fe7b7eeca1a73f4 430 Pfam PF07690 Major Facilitator Superfamily 21 389 7.6E-56 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS21090 3467fb6457d6458f5fe7b7eeca1a73f4 430 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 23 423 3.4E-149 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS21090 3467fb6457d6458f5fe7b7eeca1a73f4 430 Gene3D G3DSA:1.20.1250.20 11 195 5.1E-47 T 22-04-2016 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 Pfam PF07687 Peptidase dimerisation domain 175 282 3.2E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 SUPERFAMILY SSF53187 292 373 2.17E-65 T 22-04-2016 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 SUPERFAMILY SSF53187 5 178 2.17E-65 T 22-04-2016 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.234 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 4.7E-173 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 1.8E-43 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 PANTHER PTHR11014:SF106 4 374 4.4E-102 T 22-04-2016 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 Gene3D G3DSA:3.40.630.10 316 373 1.5E-75 T 22-04-2016 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 Gene3D G3DSA:3.40.630.10 5 187 1.5E-75 T 22-04-2016 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 Gene3D G3DSA:3.30.70.360 188 288 1.0E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 PANTHER PTHR11014 4 374 4.4E-102 T 22-04-2016 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 SUPERFAMILY SSF55031 179 286 1.64E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS13830 d184bc707d6e4b9af0ed83f5d4213f6b 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 Pfam PF01546 Peptidase family M20/M25/M40 139 402 9.4E-17 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 SUPERFAMILY SSF55031 208 320 2.56E-43 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS05690 47816567826a65213ee7283064a92c30 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 Gene3D G3DSA:3.40.630.10 322 407 2.5E-119 T 22-04-2016 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 Gene3D G3DSA:3.40.630.10 1 208 2.5E-119 T 22-04-2016 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 PANTHER PTHR11014 2 91 1.1E-203 T 22-04-2016 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 PANTHER PTHR11014 131 408 1.1E-203 T 22-04-2016 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 Hamap MF_00550 Peptidase T [pepT]. 1 404 56.59 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 SUPERFAMILY SSF53187 322 406 1.94E-84 T 22-04-2016 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 SUPERFAMILY SSF53187 1 209 1.94E-84 T 22-04-2016 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 PANTHER PTHR11014:SF3 2 91 1.1E-203 T 22-04-2016 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 PANTHER PTHR11014:SF3 131 408 1.1E-203 T 22-04-2016 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 Gene3D G3DSA:3.30.70.360 209 319 2.4E-44 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS05690 47816567826a65213ee7283064a92c30 408 PIRSF PIRSF037215 1 408 1.4E-182 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 406 8.7E-158 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APECO1_RS05690 47816567826a65213ee7283064a92c30 408 Pfam PF07687 Peptidase dimerisation domain 206 303 1.4E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 191 6.4E-13 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 PIRSF PIRSF001373 1 520 3.3E-250 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 1.7E-279 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 PANTHER PTHR11236 1 513 6.4E-275 T 22-04-2016 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 Gene3D G3DSA:3.60.120.10 4 516 3.3E-161 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 Pfam PF00425 chorismate binding enzyme 242 502 5.1E-82 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 SUPERFAMILY SSF56322 7 516 5.76E-164 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 PANTHER PTHR11236:SF22 1 513 6.4E-275 T 22-04-2016 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 6.9E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 6.9E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 6.9E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS06995 290c0047a3b04fb72e2461f9b468df78 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 6.9E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 SUPERFAMILY SSF55031 212 328 1.64E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 SUPERFAMILY SSF53187 338 408 4.0E-82 T 22-04-2016 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 SUPERFAMILY SSF53187 6 221 4.0E-82 T 22-04-2016 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 7 407 6.8E-198 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 Gene3D G3DSA:3.40.630.10 5 224 2.7E-98 T 22-04-2016 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 Gene3D G3DSA:3.40.630.10 350 408 2.7E-98 T 22-04-2016 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 PIRSF PIRSF001235 2 411 6.5E-132 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 Gene3D G3DSA:3.30.70.360 225 324 1.8E-39 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 TIGRFAM TIGR03176 AllC: allantoate amidohydrolase 1 411 1.2E-231 T 22-04-2016 IPR017591 Allantoate amidohydrolase GO:0000256|GO:0009442|GO:0030145|GO:0042803|GO:0047652 KEGG: 00230+3.5.3.-|UniPathway: UPA00395 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 PANTHER PTHR32494 6 411 1.4E-193 T 22-04-2016 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 PANTHER PTHR32494:SF5 6 411 1.4E-193 T 22-04-2016 APECO1_RS02620 8435eed98e4108fb461df2292b2a2a8e 411 Pfam PF01546 Peptidase family M20/M25/M40 79 405 7.2E-32 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 Pfam PF17203 Single cache domain 3 67 173 1.4E-21 T 22-04-2016 IPR033463 Single cache domain 3 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 SUPERFAMILY SSF103190 52 178 3.14E-33 T 22-04-2016 IPR029151 Periplasmic sensor domain-like APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 9.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 519 9.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 9.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 9.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 PANTHER PTHR24423:SF472 200 549 8.4E-164 T 22-04-2016 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 PANTHER PTHR24423:SF472 66 167 8.4E-164 T 22-04-2016 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 SMART SM00091 222 292 9.6E-9 T 22-04-2016 IPR000014 PAS domain APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 SUPERFAMILY SSF55874 408 546 6.16E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 Pfam PF00989 PAS fold 225 285 3.9E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 SUPERFAMILY SSF55785 223 277 3.84E-8 T 22-04-2016 IPR000014 PAS domain APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 Gene3D G3DSA:3.30.565.10 423 542 8.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 SUPERFAMILY SSF55890 332 376 3.4E-8 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 330 373 8.1E-8 T 22-04-2016 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 Gene3D G3DSA:3.30.450.20 43 179 1.8E-46 T 22-04-2016 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 Gene3D G3DSA:3.30.450.20 223 288 2.0E-7 T 22-04-2016 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 539 1.8E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 SMART SM00387 428 541 2.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 Gene3D G3DSA:1.10.287.130 318 387 6.5E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 PANTHER PTHR24423 200 549 8.4E-164 T 22-04-2016 APECO1_RS03010 a905e048c9890be62a1e16f31974d716 552 PANTHER PTHR24423 66 167 8.4E-164 T 22-04-2016 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 Gene3D G3DSA:3.90.1550.10 1 247 2.7E-86 T 22-04-2016 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 Gene3D G3DSA:3.30.390.50 249 333 7.0E-14 T 22-04-2016 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 PANTHER PTHR12561 1 338 2.4E-262 T 22-04-2016 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 59.941 T 22-04-2016 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 UniPathway: UPA00537|UniPathway: UPA00537 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 157 4.2E-9 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 1 329 3.5E-143 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 PANTHER PTHR12561:SF5 1 338 2.4E-262 T 22-04-2016 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 SUPERFAMILY SSF55681 3 247 4.31E-82 T 22-04-2016 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 333 6.5E-18 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 APECO1_RS25575 7c2c1b89663e95a0f785b020cc18fc25 338 SUPERFAMILY SSF82649 248 335 8.37E-25 T 22-04-2016 APECO1_RS06535 68e4c980d517808ca80ec4f367260864 301 SUPERFAMILY SSF52151 1 295 2.79E-57 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APECO1_RS06535 68e4c980d517808ca80ec4f367260864 301 Pfam PF01734 Patatin-like phospholipase 8 165 7.2E-24 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APECO1_RS06535 68e4c980d517808ca80ec4f367260864 301 PANTHER PTHR14226:SF24 1 298 4.0E-133 T 22-04-2016 APECO1_RS06535 68e4c980d517808ca80ec4f367260864 301 PANTHER PTHR14226 1 298 4.0E-133 T 22-04-2016 APECO1_RS06535 68e4c980d517808ca80ec4f367260864 301 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 22-04-2016 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 APECO1_RS06535 68e4c980d517808ca80ec4f367260864 301 Gene3D G3DSA:3.40.1090.10 8 170 2.8E-6 T 22-04-2016 APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 133 3.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 3.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 147 167 3.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 113 3.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 PANTHER PTHR33164:SF4 10 171 1.6E-20 T 22-04-2016 APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 SMART SM00347 55 157 1.4E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 Pfam PF01047 MarR family 63 121 4.2E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 Gene3D G3DSA:1.10.10.10 28 172 2.0E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 PANTHER PTHR33164 10 171 1.6E-20 T 22-04-2016 APECO1_RS01470 15b75cda2cbc33efac82e7ec0b1c7d84 174 SUPERFAMILY SSF46785 20 171 5.88E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 337 350 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 Gene3D G3DSA:3.40.1190.20 91 397 8.5E-80 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 PANTHER PTHR10584:SF166 75 402 4.3E-111 T 22-04-2016 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 Pfam PF00294 pfkB family carbohydrate kinase 92 381 1.0E-64 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 Pfam PF08220 DeoR-like helix-turn-helix domain 5 55 6.1E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.1E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.1E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 Gene3D G3DSA:1.10.10.10 4 55 5.4E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 SUPERFAMILY SSF46785 4 58 9.46E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 196 209 1.0E-26 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 264 279 1.0E-26 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 308 319 1.0E-26 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 96 117 1.0E-26 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 PRINTS PR00990 Ribokinase signature 123 142 1.0E-26 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 PANTHER PTHR10584 75 402 4.3E-111 T 22-04-2016 APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 SUPERFAMILY SSF53613 94 381 1.15E-75 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS10995 b1c7658ecb2d3e08ddf38781a32be321 404 SMART SM00420 5 57 5.4E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS03510 952a12588809478949035bbbb8605308 289 Gene3D G3DSA:3.40.50.720 2 119 2.2E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS03510 952a12588809478949035bbbb8605308 289 Gene3D G3DSA:3.40.50.261 120 287 2.6E-78 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS03510 952a12588809478949035bbbb8605308 289 SUPERFAMILY SSF51735 1 122 1.08E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS03510 952a12588809478949035bbbb8605308 289 SUPERFAMILY SSF52210 123 288 4.97E-57 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS03510 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.3E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS03510 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.3E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS03510 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.3E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS03510 952a12588809478949035bbbb8605308 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.3E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS03510 952a12588809478949035bbbb8605308 289 Pfam PF00549 CoA-ligase 151 271 4.8E-20 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS03510 952a12588809478949035bbbb8605308 289 PIRSF PIRSF001553 1 289 8.1E-136 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS03510 952a12588809478949035bbbb8605308 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APECO1_RS03510 952a12588809478949035bbbb8605308 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 5.1E-146 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS03510 952a12588809478949035bbbb8605308 289 Pfam PF02629 CoA binding domain 6 99 2.3E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS03510 952a12588809478949035bbbb8605308 289 PANTHER PTHR11117 1 289 7.7E-198 T 22-04-2016 APECO1_RS03510 952a12588809478949035bbbb8605308 289 SMART SM00881 4 100 2.2E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS03510 952a12588809478949035bbbb8605308 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 PANTHER PTHR11918:SF43 1 474 3.3E-242 T 22-04-2016 APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 Pfam PF04055 Radical SAM superfamily 151 325 3.8E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 3.0E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 PANTHER PTHR11918 1 474 3.3E-242 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 SMART SM00729 147 367 2.2E-64 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.6E-222 T 22-04-2016 APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.2E-159 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 SUPERFAMILY SSF102114 127 373 9.81E-64 T 22-04-2016 APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 Pfam PF01938 TRAM domain 378 440 6.2E-21 T 22-04-2016 IPR002792 TRAM domain APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 Gene3D G3DSA:3.80.30.20 146 380 3.0E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APECO1_RS03180 3dfc0bccde63d933568eb3947831a9a2 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 75.421 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 PANTHER PTHR30203:SF15 2 459 8.4E-180 T 22-04-2016 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 Gene3D G3DSA:2.20.200.10 117 134 2.7E-15 T 22-04-2016 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 Gene3D G3DSA:2.20.200.10 307 342 2.7E-15 T 22-04-2016 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 Gene3D G3DSA:1.20.1600.10 52 89 6.9E-94 T 22-04-2016 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 Gene3D G3DSA:1.20.1600.10 135 306 6.9E-94 T 22-04-2016 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 Gene3D G3DSA:1.20.1600.10 344 458 6.9E-94 T 22-04-2016 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 SUPERFAMILY SSF56954 4 459 1.31E-104 T 22-04-2016 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 PANTHER PTHR30203 2 459 8.4E-180 T 22-04-2016 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 457 2.3E-113 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 Pfam PF02321 Outer membrane efflux protein 64 247 3.5E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS02755 b1d858f8fa9262da7d01dcee68ceca95 460 Pfam PF02321 Outer membrane efflux protein 272 455 2.1E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS15160 598850f15946ef66bf1de6b312b26a68 426 PANTHER PTHR11986:SF70 1 426 0.0 T 22-04-2016 APECO1_RS15160 598850f15946ef66bf1de6b312b26a68 426 Pfam PF00202 Aminotransferase class-III 17 420 1.3E-143 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS15160 598850f15946ef66bf1de6b312b26a68 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 421 1.9E-162 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 APECO1_RS15160 598850f15946ef66bf1de6b312b26a68 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 273 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS15160 598850f15946ef66bf1de6b312b26a68 426 SUPERFAMILY SSF53383 20 423 2.42E-135 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS15160 598850f15946ef66bf1de6b312b26a68 426 Gene3D G3DSA:3.40.640.10 59 303 2.5E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS15160 598850f15946ef66bf1de6b312b26a68 426 Gene3D G3DSA:3.90.1150.10 304 423 6.9E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS15160 598850f15946ef66bf1de6b312b26a68 426 PANTHER PTHR11986 1 426 0.0 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 SUPERFAMILY SSF52374 10 337 1.04E-103 T 22-04-2016 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 3.2E-128 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:3.90.800.10 101 209 4.0E-48 T 22-04-2016 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 551 0.0 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 2.4E-63 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:1.10.1160.10 263 338 6.2E-39 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:2.40.240.10 348 461 1.1E-49 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 SUPERFAMILY SSF50715 340 547 6.8E-81 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 PANTHER PTHR11451 7 247 2.3E-244 T 22-04-2016 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 PANTHER PTHR11451 267 551 2.3E-244 T 22-04-2016 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:3.40.50.620 212 262 4.0E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS03300 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:3.40.50.620 27 96 4.0E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS03300 2f3899690673291472829ac2422181d4 554 Gene3D G3DSA:2.40.240.10 462 547 4.6E-35 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.945 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 PANTHER PTHR11451:SF29 7 247 2.3E-244 T 22-04-2016 APECO1_RS03300 2f3899690673291472829ac2422181d4 554 PANTHER PTHR11451:SF29 267 551 2.3E-244 T 22-04-2016 APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 1.3E-180 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PANTHER PTHR11206 217 442 2.6E-100 T 22-04-2016 APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PANTHER PTHR11206 70 82 2.6E-100 T 22-04-2016 APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PANTHER PTHR11206 469 481 2.6E-100 T 22-04-2016 APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PIRSF PIRSF002869 1 511 6.9E-184 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 Pfam PF03023 MviN-like protein 28 478 1.0E-162 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PANTHER PTHR11206:SF90 217 442 2.6E-100 T 22-04-2016 APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PANTHER PTHR11206:SF90 70 82 2.6E-100 T 22-04-2016 APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PANTHER PTHR11206:SF90 469 481 2.6E-100 T 22-04-2016 APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.2E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.2E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.2E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.2E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.2E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.2E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS05395 30a2e7ab99ac77723ce65658e8e06c01 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.2E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 SUPERFAMILY SSF53067 5 190 1.17E-62 T 22-04-2016 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 PRINTS PR00471 Acetate kinase family signature 172 185 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 PRINTS PR00471 Acetate kinase family signature 299 312 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 PRINTS PR00471 Acetate kinase family signature 321 337 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 PRINTS PR00471 Acetate kinase family signature 202 223 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 PRINTS PR00471 Acetate kinase family signature 376 388 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 PRINTS PR00471 Acetate kinase family signature 6 17 1.0E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 166.017 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 SUPERFAMILY SSF53067 156 394 1.02E-81 T 22-04-2016 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 PANTHER PTHR21060 2 394 2.7E-176 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 Gene3D G3DSA:3.30.420.40 104 204 3.5E-7 T 22-04-2016 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 PIRSF PIRSF000722 2 398 9.6E-140 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 TIGRFAM TIGR00016 ackA: acetate kinase 4 394 1.1E-147 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 PANTHER PTHR21060:SF15 2 394 2.7E-176 T 22-04-2016 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 Gene3D G3DSA:3.30.420.40 205 394 3.6E-70 T 22-04-2016 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 Pfam PF00871 Acetokinase family 6 388 4.2E-146 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS23865 7cfe9b1b3ff2de8cbb20a95a086e6fd4 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18120 0a637c6f1a3fd8aa84453c907c114203 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 1.3E-72 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 APECO1_RS18120 0a637c6f1a3fd8aa84453c907c114203 157 PANTHER PTHR33799 1 157 8.1E-100 T 22-04-2016 APECO1_RS18120 0a637c6f1a3fd8aa84453c907c114203 157 PANTHER PTHR33799:SF6 1 157 8.1E-100 T 22-04-2016 APECO1_RS18120 0a637c6f1a3fd8aa84453c907c114203 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 1.7E-49 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS18120 0a637c6f1a3fd8aa84453c907c114203 157 SUPERFAMILY SSF52728 3 156 2.09E-50 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS18120 0a637c6f1a3fd8aa84453c907c114203 157 Gene3D G3DSA:3.40.35.10 3 157 4.8E-57 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 SUPERFAMILY SSF52016 163 371 9.16E-73 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 Gene3D G3DSA:3.30.499.10 403 519 3.6E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 Gene3D G3DSA:3.40.1060.10 520 682 8.1E-89 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 7.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 PANTHER PTHR11670 305 860 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 Gene3D G3DSA:3.20.19.10 162 361 1.8E-95 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 4.2E-98 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.3E-68 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 SUPERFAMILY SSF53732 380 859 2.22E-150 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 Gene3D G3DSA:3.30.499.10 684 859 5.8E-56 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 SUPERFAMILY SSF74778 2 160 7.98E-70 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 PANTHER PTHR11670:SF39 305 860 0.0 T 22-04-2016 APECO1_RS00650 b7e1230167a6e92eb353299bb961d01a 865 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 PANTHER PTHR10438:SF266 11 139 1.7E-65 T 22-04-2016 APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 PANTHER PTHR10438 11 139 1.7E-65 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 138 4.5E-37 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 SUPERFAMILY SSF52833 24 138 2.0E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 PRINTS PR00421 Thioredoxin family signature 103 114 1.7E-9 T 22-04-2016 APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 PRINTS PR00421 Thioredoxin family signature 63 72 1.7E-9 T 22-04-2016 APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 PRINTS PR00421 Thioredoxin family signature 55 63 1.7E-9 T 22-04-2016 APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 Gene3D G3DSA:3.40.30.10 31 138 8.1E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS14600 e9d50cfbfaea17e8ebb59f9add77f07a 139 Pfam PF00085 Thioredoxin 37 137 1.6E-28 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 Gene3D G3DSA:3.40.1190.10 94 299 9.3E-69 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 SUPERFAMILY SSF53623 95 297 4.84E-58 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 373 4.4E-10 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 SUPERFAMILY SSF51984 3 94 7.98E-25 T 22-04-2016 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 Gene3D G3DSA:3.40.50.720 3 92 2.1E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 PANTHER PTHR23135:SF2 1 437 2.6E-179 T 22-04-2016 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 35.2 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 PANTHER PTHR23135 1 437 2.6E-179 T 22-04-2016 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 5.6E-131 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 Pfam PF08245 Mur ligase middle domain 110 280 4.8E-29 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 SUPERFAMILY SSF53244 299 437 1.21E-54 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00480 094138162ece686de2c5c7850e5a0d12 438 Gene3D G3DSA:3.90.190.20 300 433 3.4E-45 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS06585 afc896cdca51fd736a5ea00163f683e9 306 PANTHER PTHR30465 1 306 4.9E-165 T 22-04-2016 APECO1_RS06585 afc896cdca51fd736a5ea00163f683e9 306 PANTHER PTHR30465:SF74 1 306 4.9E-165 T 22-04-2016 APECO1_RS06585 afc896cdca51fd736a5ea00163f683e9 306 SUPERFAMILY SSF161098 89 291 7.63E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS06585 afc896cdca51fd736a5ea00163f683e9 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 8.3E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS06585 afc896cdca51fd736a5ea00163f683e9 306 Gene3D G3DSA:1.10.3720.10 88 302 2.0E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:3.40.50.300 821 938 4.8E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:3.40.50.300 2 51 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:3.40.50.300 603 692 4.8E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:3.40.50.300 478 599 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:1.10.8.280 286 406 5.5E-44 T 22-04-2016 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 SUPERFAMILY SSF52540 433 569 1.36E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 SUPERFAMILY SSF52540 4 204 1.36E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:1.20.1580.10 407 477 5.2E-54 T 22-04-2016 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:1.20.1580.10 91 129 5.2E-54 T 22-04-2016 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:1.20.1580.10 251 284 5.2E-54 T 22-04-2016 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 SUPERFAMILY SSF52540 613 911 2.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:1.20.1580.10 694 820 3.0E-54 T 22-04-2016 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 PANTHER PTHR32282 1 940 0.0 T 22-04-2016 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Pfam PF00005 ABC transporter 806 860 1.1E-5 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 PANTHER PTHR32282:SF2 1 940 0.0 T 22-04-2016 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.229 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:3.30.1490.20 130 153 4.9E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS23220 3b0e5d0fa945743f03688cb1ea85bcf6 940 Gene3D G3DSA:3.30.1490.20 200 249 4.9E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 Gene3D G3DSA:3.30.870.10 4 166 9.7E-40 T 22-04-2016 APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 Gene3D G3DSA:3.30.870.10 206 361 7.8E-33 T 22-04-2016 APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 383 51.892 T 22-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 SMART SM00155 285 312 10.0 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 SMART SM00155 108 135 1.8E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 SUPERFAMILY SSF56024 4 162 1.44E-39 T 22-04-2016 APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 Pfam PF13091 PLD-like domain 214 335 3.1E-25 T 22-04-2016 IPR025202 Phospholipase D-like domain APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 Pfam PF13091 PLD-like domain 26 142 1.6E-14 T 22-04-2016 IPR025202 Phospholipase D-like domain APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 PANTHER PTHR21248:SF5 1 380 4.4E-122 T 22-04-2016 APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 PANTHER PTHR21248 1 380 4.4E-122 T 22-04-2016 APECO1_RS03825 e0483f7431a18bf3aed687b835027da6 413 SUPERFAMILY SSF56024 188 358 1.61E-37 T 22-04-2016 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.5E-60 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Gene3D G3DSA:3.90.226.10 14 201 3.4E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Gene3D G3DSA:3.90.226.10 235 296 3.4E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.565 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 1.0E-37 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 SUPERFAMILY SSF51735 314 495 3.58E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 SUPERFAMILY SSF52096 3 303 2.56E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 PANTHER PTHR23309 8 723 0.0 T 22-04-2016 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Gene3D G3DSA:1.10.1040.10 498 593 6.9E-21 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 PANTHER PTHR23309:SF18 8 723 0.0 T 22-04-2016 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Gene3D G3DSA:3.40.50.720 304 497 6.2E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 SUPERFAMILY SSF48179 495 638 1.02E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 1.1E-25 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 690 7.5E-6 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 Gene3D G3DSA:1.10.1040.10 632 710 2.2E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS21985 3a2e0f225e0c18668562e22fcfb5fced 729 SUPERFAMILY SSF48179 622 714 2.98E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Pfam PF00703 Glycosyl hydrolases family 2 222 334 5.9E-15 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Pfam PF16353 Domain of unknown function(DUF4981) 637 723 2.4E-18 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Gene3D G3DSA:2.60.40.320 626 728 3.0E-35 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 336 629 6.6E-125 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 SUPERFAMILY SSF49303 622 727 1.1E-31 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Gene3D G3DSA:2.70.98.10 736 1021 1.9E-88 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 386 411 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Gene3D G3DSA:2.60.40.320 209 334 1.4E-33 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 SUPERFAMILY SSF49303 221 334 3.17E-27 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 SUPERFAMILY SSF49785 15 219 5.24E-70 T 22-04-2016 IPR008979 Galactose-binding domain-like APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 448 462 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 PANTHER PTHR10066:SF72 3 577 0.0 T 22-04-2016 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 PANTHER PTHR10066:SF72 595 1022 0.0 T 22-04-2016 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 SUPERFAMILY SSF51445 335 625 2.59E-104 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Gene3D G3DSA:2.60.120.260 7 208 1.2E-88 T 22-04-2016 IPR008979 Galactose-binding domain-like APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 52 219 7.9E-75 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Hamap MF_01687 Beta-galactosidase [lacZ]. 6 1024 17.708 T 22-04-2016 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Gene3D G3DSA:3.20.20.80 336 624 6.7E-116 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 Pfam PF02929 Beta galactosidase small chain 754 1020 5.5E-59 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 PANTHER PTHR10066 3 577 0.0 T 22-04-2016 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 PANTHER PTHR10066 595 1022 0.0 T 22-04-2016 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 SMART SM01038 749 1022 2.1E-112 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 SUPERFAMILY SSF74650 735 1022 4.87E-94 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 448 463 6.1E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 147 162 6.1E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 394 6.1E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 345 359 6.1E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS01825 2488bd67558e57b431e35605ab2b60ef 1024 PRINTS PR00132 Glycosyl hydrolase family 2 signature 532 547 6.1E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS05415 07f01384a74491cb61eda6d34479f9e9 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 1.4E-49 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 APECO1_RS05415 07f01384a74491cb61eda6d34479f9e9 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APECO1_RS05415 07f01384a74491cb61eda6d34479f9e9 138 Pfam PF00460 Flagella basal body rod protein 9 39 2.2E-12 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APECO1_RS05415 07f01384a74491cb61eda6d34479f9e9 138 PIRSF PIRSF002889 1 137 9.0E-44 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 APECO1_RS05415 07f01384a74491cb61eda6d34479f9e9 138 PANTHER PTHR30435:SF12 2 138 8.4E-56 T 22-04-2016 APECO1_RS05415 07f01384a74491cb61eda6d34479f9e9 138 PANTHER PTHR30435 2 138 8.4E-56 T 22-04-2016 APECO1_RS14710 471cb7c8f5b737badaa0c459d8e92d62 245 SUPERFAMILY SSF48452 27 121 2.34E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14710 471cb7c8f5b737badaa0c459d8e92d62 245 Gene3D G3DSA:1.25.40.10 29 234 3.7E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14710 471cb7c8f5b737badaa0c459d8e92d62 245 Pfam PF13525 Outer membrane lipoprotein 28 236 9.6E-85 T 22-04-2016 APECO1_RS14710 471cb7c8f5b737badaa0c459d8e92d62 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 243 49.005 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD APECO1_RS14710 471cb7c8f5b737badaa0c459d8e92d62 245 PANTHER PTHR37423 1 245 3.9E-119 T 22-04-2016 APECO1_RS14710 471cb7c8f5b737badaa0c459d8e92d62 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 243 2.0E-88 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD APECO1_RS22600 8f4d5a6abb49fde133261dddefea5fd2 427 Gene3D G3DSA:1.20.1250.20 229 425 2.2E-28 T 22-04-2016 APECO1_RS22600 8f4d5a6abb49fde133261dddefea5fd2 427 PANTHER PTHR11662:SF277 15 427 4.7E-126 T 22-04-2016 APECO1_RS22600 8f4d5a6abb49fde133261dddefea5fd2 427 Gene3D G3DSA:1.20.1250.20 15 203 2.7E-46 T 22-04-2016 APECO1_RS22600 8f4d5a6abb49fde133261dddefea5fd2 427 PANTHER PTHR11662 15 427 4.7E-126 T 22-04-2016 APECO1_RS22600 8f4d5a6abb49fde133261dddefea5fd2 427 Pfam PF07690 Major Facilitator Superfamily 28 387 9.2E-57 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS22600 8f4d5a6abb49fde133261dddefea5fd2 427 SUPERFAMILY SSF103473 13 424 8.37E-84 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS22600 8f4d5a6abb49fde133261dddefea5fd2 427 PIRSF PIRSF002808 7 386 2.4E-39 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS02775 7ef28bda546d322595f6ca023cb98f2f 458 PANTHER PTHR11785 9 458 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS02775 7ef28bda546d322595f6ca023cb98f2f 458 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APECO1_RS02775 7ef28bda546d322595f6ca023cb98f2f 458 PANTHER PTHR11785:SF365 9 458 0.0 T 22-04-2016 APECO1_RS02775 7ef28bda546d322595f6ca023cb98f2f 458 PIRSF PIRSF006060 4 457 1.6E-77 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS02775 7ef28bda546d322595f6ca023cb98f2f 458 Pfam PF00324 Amino acid permease 27 452 6.0E-119 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APECO1_RS08245 684b78788286cfb84bd684488769d524 790 SUPERFAMILY SSF56935 30 187 3.34E-52 T 22-04-2016 APECO1_RS08245 684b78788286cfb84bd684488769d524 790 SUPERFAMILY SSF56935 217 790 3.34E-52 T 22-04-2016 APECO1_RS08245 684b78788286cfb84bd684488769d524 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 165 1.4E-8 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS08245 684b78788286cfb84bd684488769d524 790 Gene3D G3DSA:2.40.170.20 217 790 1.6E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS08245 684b78788286cfb84bd684488769d524 790 Gene3D G3DSA:2.40.170.20 166 175 1.6E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS08245 684b78788286cfb84bd684488769d524 790 Gene3D G3DSA:2.170.130.10 47 165 1.3E-5 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 1.8E-16 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 SUPERFAMILY SSF103039 49 231 3.66E-18 T 22-04-2016 IPR028976 CheC-like domain APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 PANTHER PTHR30034:SF0 2 333 2.6E-154 T 22-04-2016 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 2.9E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 2.9E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.9E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 2.9E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 PIRSF PIRSF002888 2 331 9.0E-101 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 Gene3D G3DSA:2.30.330.10 242 323 4.7E-6 T 22-04-2016 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 SUPERFAMILY SSF101801 249 323 1.57E-12 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 321 2.7E-120 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 PANTHER PTHR30034 2 333 2.6E-154 T 22-04-2016 APECO1_RS10385 0b2aceb704c9cf7816726884a0248460 334 Pfam PF02154 Flagellar motor switch protein FliM 38 231 2.6E-80 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APECO1_RS04885 564b6d7190f3bb8c3d828248349322c6 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 8 705 0.0 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK APECO1_RS04885 564b6d7190f3bb8c3d828248349322c6 717 PANTHER PTHR30509:SF8 1 709 0.0 T 22-04-2016 APECO1_RS04885 564b6d7190f3bb8c3d828248349322c6 717 Pfam PF13515 Fusaric acid resistance protein-like 403 525 1.9E-25 T 22-04-2016 APECO1_RS04885 564b6d7190f3bb8c3d828248349322c6 717 Pfam PF12805 FUSC-like inner membrane protein yccS 66 345 3.3E-112 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal APECO1_RS04885 564b6d7190f3bb8c3d828248349322c6 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 8 706 0.0 T 22-04-2016 IPR010019 Integral membrane protein, YccS APECO1_RS04885 564b6d7190f3bb8c3d828248349322c6 717 PANTHER PTHR30509 1 709 0.0 T 22-04-2016 APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 SUPERFAMILY SSF48008 95 234 3.4E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 Gene3D G3DSA:1.10.10.10 7 76 2.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 Pfam PF07729 FCD domain 99 226 2.4E-17 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 SMART SM00345 15 74 3.0E-29 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 SMART SM00895 99 227 9.2E-17 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 PANTHER PTHR11751:SF355 93 115 3.0E-51 T 22-04-2016 APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 PANTHER PTHR11751:SF355 1 77 3.0E-51 T 22-04-2016 APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 Gene3D G3DSA:1.20.120.530 97 238 5.3E-18 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 SUPERFAMILY SSF46785 6 76 4.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 PANTHER PTHR11751 93 115 3.0E-51 T 22-04-2016 APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 PANTHER PTHR11751 1 77 3.0E-51 T 22-04-2016 APECO1_RS00625 46a9878e5f5f0a1f25c26a908baa14ab 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-25 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 SUPERFAMILY SSF53706 4 1074 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615 852 877 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615 34 348 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615 366 412 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615 697 836 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615 995 1229 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:3.40.50.740 108 203 9.6E-7 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:2.20.25.90 52 98 2.5E-32 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:3.40.50.740 593 778 6.7E-60 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Pfam PF00384 Molybdopterin oxidoreductase 108 833 5.4E-197 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:4.10.1200.10 1 28 1.5E-19 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1125 1152 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 SMART SM00926 43 105 6.6E-8 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615:SF165 852 877 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615:SF165 34 348 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615:SF165 366 412 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615:SF165 697 836 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 PANTHER PTHR11615:SF165 995 1229 0.0 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:3.90.55.10 779 836 6.2E-7 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1202 6.1E-22 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 7.6E-17 T 22-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:3.40.228.10 218 336 3.1E-79 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:3.40.228.10 487 592 3.1E-79 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 Gene3D G3DSA:2.40.40.20 1054 1234 3.9E-45 T 22-04-2016 APECO1_RS06490 b6f4d6e7072a78fce3327da8124a4a8a 1247 SUPERFAMILY SSF50692 1081 1235 1.7E-47 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS24440 8d3c34fd9431a4b9a7492f861cba5b6a 425 SUPERFAMILY SSF103473 4 412 7.85E-85 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS24440 8d3c34fd9431a4b9a7492f861cba5b6a 425 PANTHER PTHR11662 1 417 2.0E-190 T 22-04-2016 APECO1_RS24440 8d3c34fd9431a4b9a7492f861cba5b6a 425 PIRSF PIRSF002808 1 424 1.6E-43 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS24440 8d3c34fd9431a4b9a7492f861cba5b6a 425 Pfam PF07690 Major Facilitator Superfamily 15 318 3.5E-52 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS24440 8d3c34fd9431a4b9a7492f861cba5b6a 425 Gene3D G3DSA:1.20.1250.20 216 414 5.5E-21 T 22-04-2016 APECO1_RS24440 8d3c34fd9431a4b9a7492f861cba5b6a 425 Gene3D G3DSA:1.20.1250.20 5 199 2.7E-51 T 22-04-2016 APECO1_RS24440 8d3c34fd9431a4b9a7492f861cba5b6a 425 PANTHER PTHR11662:SF285 1 417 2.0E-190 T 22-04-2016 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 1.8E-178 T 22-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 SMART SM00354 4 74 5.3E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:1.10.260.40 3 53 4.3E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 PANTHER PTHR30146:SF42 4 309 1.5E-221 T 22-04-2016 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 5.3E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 Pfam PF13377 Periplasmic binding protein-like domain 168 312 2.7E-19 T 22-04-2016 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 SUPERFAMILY SSF53822 63 314 2.72E-60 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 SUPERFAMILY SSF47413 3 60 2.13E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:3.40.50.2300 175 279 4.5E-42 T 22-04-2016 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 Gene3D G3DSA:3.40.50.2300 54 174 2.8E-19 T 22-04-2016 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS24635 e300e389c92535b2ab4d64bd780f0a09 315 PANTHER PTHR30146 4 309 1.5E-221 T 22-04-2016 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 PANTHER PTHR11986 1 426 2.7E-242 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 PANTHER PTHR11986:SF5 1 426 2.7E-242 T 22-04-2016 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 Gene3D G3DSA:3.90.1150.10 2 69 2.4E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 Gene3D G3DSA:3.90.1150.10 319 425 2.4E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 2.2E-207 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 109.085 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 Gene3D G3DSA:3.40.640.10 70 315 2.1E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 Pfam PF00202 Aminotransferase class-III 32 397 3.6E-79 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS00830 5b25e9c5e71178de50fa3ffc30245752 426 SUPERFAMILY SSF53383 2 425 1.55E-138 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS19560 92ce98fdf1338b4b505ceebafe94405f 408 PANTHER PTHR11118 1 408 5.0E-217 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APECO1_RS19560 92ce98fdf1338b4b505ceebafe94405f 408 SUPERFAMILY SSF103365 7 408 3.14E-142 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APECO1_RS19560 92ce98fdf1338b4b505ceebafe94405f 408 PANTHER PTHR11118:SF3 1 408 5.0E-217 T 22-04-2016 APECO1_RS19560 92ce98fdf1338b4b505ceebafe94405f 408 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 29 58 - T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APECO1_RS19560 92ce98fdf1338b4b505ceebafe94405f 408 Pfam PF01139 tRNA-splicing ligase RtcB 29 408 2.1E-138 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 PIRSF PIRSF000726 2 449 3.7E-167 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 Gene3D G3DSA:3.40.1160.10 106 294 3.8E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 Gene3D G3DSA:3.40.1160.10 3 53 3.8E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 SUPERFAMILY SSF55021 372 448 2.46E-13 T 22-04-2016 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 SUPERFAMILY SSF53633 4 292 5.37E-76 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 2.8E-139 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 PANTHER PTHR21499 4 449 6.6E-149 T 22-04-2016 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 Pfam PF00696 Amino acid kinase family 4 277 8.7E-48 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 PANTHER PTHR21499:SF3 4 449 6.6E-149 T 22-04-2016 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 448 2.9E-153 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 Pfam PF01842 ACT domain 323 378 2.1E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS22975 5ec46a150b2d0ad6c1b0436e8095f9e3 449 SUPERFAMILY SSF55021 297 393 7.85E-17 T 22-04-2016 APECO1_RS02935 d89ba285137188c719ad185b287384ff 406 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 234 1.7E-15 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APECO1_RS02935 d89ba285137188c719ad185b287384ff 406 PANTHER PTHR30083 2 406 1.3E-230 T 22-04-2016 APECO1_RS02935 d89ba285137188c719ad185b287384ff 406 PANTHER PTHR30083:SF0 2 406 1.3E-230 T 22-04-2016 APECO1_RS02935 d89ba285137188c719ad185b287384ff 406 Gene3D G3DSA:3.40.50.620 14 235 4.6E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS02935 d89ba285137188c719ad185b287384ff 406 Pfam PF11922 Domain of unknown function (DUF3440) 352 384 7.5E-8 T 22-04-2016 IPR021845 Protein of unknown function DUF3440 APECO1_RS02935 d89ba285137188c719ad185b287384ff 406 Pfam PF11922 Domain of unknown function (DUF3440) 237 344 7.7E-27 T 22-04-2016 IPR021845 Protein of unknown function DUF3440 APECO1_RS02935 d89ba285137188c719ad185b287384ff 406 SUPERFAMILY SSF52402 13 231 6.41E-41 T 22-04-2016 APECO1_RS24980 314dd10f10b4fefd9bf437763178b5e1 242 Gene3D G3DSA:3.40.190.10 38 144 6.7E-7 T 22-04-2016 APECO1_RS24980 314dd10f10b4fefd9bf437763178b5e1 242 PANTHER PTHR30126:SF2 1 237 5.2E-121 T 22-04-2016 APECO1_RS24980 314dd10f10b4fefd9bf437763178b5e1 242 Pfam PF03466 LysR substrate binding domain 38 236 1.1E-25 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS24980 314dd10f10b4fefd9bf437763178b5e1 242 SUPERFAMILY SSF53850 39 237 5.27E-24 T 22-04-2016 APECO1_RS24980 314dd10f10b4fefd9bf437763178b5e1 242 Gene3D G3DSA:3.40.190.10 145 203 8.7E-8 T 22-04-2016 APECO1_RS24980 314dd10f10b4fefd9bf437763178b5e1 242 PANTHER PTHR30126 1 237 5.2E-121 T 22-04-2016 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 Gene3D G3DSA:3.90.1150.10 426 586 1.0E-66 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 5.3E-199 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 SUPERFAMILY SSF53383 130 561 4.78E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 PANTHER PTHR11751 510 630 5.8E-257 T 22-04-2016 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 PANTHER PTHR11751 482 490 5.8E-257 T 22-04-2016 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 PANTHER PTHR11751 131 459 5.8E-257 T 22-04-2016 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 Gene3D G3DSA:3.40.640.10 130 423 2.1E-100 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 PANTHER PTHR11751:SF406 510 630 5.8E-257 T 22-04-2016 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 PANTHER PTHR11751:SF406 482 490 5.8E-257 T 22-04-2016 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 PANTHER PTHR11751:SF406 131 459 5.8E-257 T 22-04-2016 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 4.5E-29 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 Gene3D G3DSA:3.90.100.10 587 714 5.4E-39 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 SUPERFAMILY SSF55904 567 708 5.75E-45 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 PIRSF PIRSF009393 1 712 2.5E-287 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 APECO1_RS23645 d062e9d2d6b81e1558c889f03f3e13ea 715 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 8.6E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Gene3D G3DSA:3.90.199.10 34 216 2.3E-84 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 PANTHER PTHR10169:SF48 450 814 0.0 T 22-04-2016 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 PANTHER PTHR10169:SF48 2 418 0.0 T 22-04-2016 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Gene3D G3DSA:3.30.1360.40 236 333 2.9E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Gene3D G3DSA:1.10.268.10 363 496 2.8E-49 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 SUPERFAMILY SSF101904 533 851 4.05E-111 T 22-04-2016 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 SMART SM00434 11 499 4.5E-301 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 7.5E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 8.1E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 5.8E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 1.0E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.0E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 688 3.6E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 847 30.006 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 1.1E-153 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 Gene3D G3DSA:2.120.10.90 531 839 3.7E-139 T 22-04-2016 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 SUPERFAMILY SSF56719 30 521 3.14E-182 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 PANTHER PTHR10169 450 814 0.0 T 22-04-2016 APECO1_RS12445 ed2c0157137dce530b2331ba6d0e1324 875 PANTHER PTHR10169 2 418 0.0 T 22-04-2016 APECO1_RS20890 c8032c6477495dd82d529b94bd4cc423 283 PIRSF PIRSF001359 1 283 1.3E-64 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS20890 c8032c6477495dd82d529b94bd4cc423 283 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 281 2.3E-75 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS20890 c8032c6477495dd82d529b94bd4cc423 283 SUPERFAMILY SSF51569 4 283 2.38E-75 T 22-04-2016 APECO1_RS20890 c8032c6477495dd82d529b94bd4cc423 283 Gene3D G3DSA:3.20.20.70 2 283 3.7E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS20890 c8032c6477495dd82d529b94bd4cc423 283 PANTHER PTHR30304 4 283 4.2E-57 T 22-04-2016 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 PANTHER PTHR30146:SF48 1 336 2.4E-143 T 22-04-2016 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 SUPERFAMILY SSF47413 1 59 5.63E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 SMART SM00354 1 71 9.1E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 SUPERFAMILY SSF53822 60 331 3.73E-68 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 Gene3D G3DSA:1.10.260.40 2 57 1.2E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 Gene3D G3DSA:3.40.50.2300 58 168 2.2E-34 T 22-04-2016 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 Gene3D G3DSA:3.40.50.2300 169 330 7.9E-50 T 22-04-2016 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 PANTHER PTHR30146 1 336 2.4E-143 T 22-04-2016 APECO1_RS15445 b9c765936f3fdbd9dd79799f37d08d55 336 Pfam PF13377 Periplasmic binding protein-like domain 171 330 4.1E-33 T 22-04-2016 APECO1_RS13705 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 PANTHER PTHR40609 1 218 8.6E-155 T 22-04-2016 APECO1_RS13705 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 5.7E-101 T 22-04-2016 IPR030983 Ethanolamine utilization protein EutL GO:0005198 UniPathway: UPA00560 APECO1_RS13705 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 SUPERFAMILY SSF143414 158 211 6.15E-6 T 22-04-2016 APECO1_RS13705 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 PANTHER PTHR40609:SF1 1 218 8.6E-155 T 22-04-2016 APECO1_RS13705 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 PIRSF PIRSF012290 1 219 1.9E-85 T 22-04-2016 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 APECO1_RS13705 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 SMART SM00877 146 219 2.9E-7 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13705 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 SMART SM00877 35 132 7.1E-4 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13705 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 Pfam PF00936 BMC domain 36 107 2.9E-11 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13705 5c19c38bb7f21d3f0ac7bd6178b77dd0 219 Pfam PF00936 BMC domain 160 208 1.9E-6 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Gene3D G3DSA:1.20.120.160 993 1123 2.5E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SUPERFAMILY SSF55874 697 869 1.44E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Gene3D G3DSA:3.30.565.10 709 870 7.3E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Pfam PF00512 His Kinase A (phospho-acceptor) domain 641 707 1.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SUPERFAMILY SSF52172 887 1016 5.41E-36 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SMART SM00388 641 707 6.8E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SMART SM00448 889 1000 2.5E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Pfam PF00072 Response regulator receiver domain 891 1000 1.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SUPERFAMILY SSF53850 234 451 8.1E-31 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 PANTHER PTHR24423 490 1043 1.5E-152 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 755 867 1.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 PANTHER PTHR24423:SF414 490 1043 1.5E-152 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SUPERFAMILY SSF53850 4 208 5.2E-23 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SMART SM00073 1024 1123 5.5E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Gene3D G3DSA:3.40.190.10 412 450 3.6E-13 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Gene3D G3DSA:3.40.190.10 230 310 3.6E-13 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SMART SM00062 233 452 2.7E-44 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SMART SM00062 3 209 0.0036 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Gene3D G3DSA:3.40.190.10 311 393 9.5E-4 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 795 809 4.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 823 4.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 828 846 4.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 852 865 4.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Gene3D G3DSA:3.40.190.10 3 116 1.5E-9 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 PANTHER PTHR24423:SF414 5 27 1.5E-152 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 236 450 1.1E-23 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 4 206 3.3E-13 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Gene3D G3DSA:3.40.50.2300 887 992 1.1E-36 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 PANTHER PTHR24423 5 27 1.5E-152 T 22-04-2016 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SUPERFAMILY SSF47226 983 1112 4.06E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 Gene3D G3DSA:1.10.287.130 641 702 1.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SUPERFAMILY SSF47384 624 708 2.16E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS13365 6a58ad6653a8ae30170530fb4df41d0e 1127 SMART SM00387 754 868 5.6E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Pfam PF00703 Glycosyl hydrolases family 2 209 318 2.3E-19 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 320 604 2.8E-120 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Gene3D G3DSA:3.20.20.80 320 598 1.2E-91 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 378 1.2E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 435 450 1.2E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 1.2E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 506 521 1.2E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 329 343 1.2E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 SUPERFAMILY SSF51445 320 598 1.15E-83 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Gene3D G3DSA:2.60.40.320 196 318 5.6E-33 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 435 449 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Gene3D G3DSA:2.60.120.260 2 195 4.7E-71 T 22-04-2016 IPR008979 Galactose-binding domain-like APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Gene3D G3DSA:2.60.40.320 601 701 1.5E-30 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Pfam PF16353 Domain of unknown function(DUF4981) 614 700 3.0E-17 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 204 4.1E-45 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 SUPERFAMILY SSF74650 714 1000 1.73E-84 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 SUPERFAMILY SSF49785 1 205 2.27E-59 T 22-04-2016 IPR008979 Galactose-binding domain-like APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 PANTHER PTHR10066 569 1000 0.0 T 22-04-2016 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 PANTHER PTHR10066 1 551 0.0 T 22-04-2016 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 SUPERFAMILY SSF49303 209 318 1.04E-24 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Pfam PF02929 Beta galactosidase small chain 730 997 6.3E-65 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 Gene3D G3DSA:2.70.98.10 714 1000 1.2E-87 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 SUPERFAMILY SSF49303 606 705 8.63E-24 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 SMART SM01038 727 998 4.7E-125 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 PANTHER PTHR10066:SF72 569 1000 0.0 T 22-04-2016 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 PANTHER PTHR10066:SF72 1 551 0.0 T 22-04-2016 APECO1_RS17890 228e24d9913c9c038d3b8e01aaaf2b04 1030 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 370 395 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS07105 a3c077e936ebfcddb5a2d3193dcad8c0 241 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 6.1E-55 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS07105 a3c077e936ebfcddb5a2d3193dcad8c0 241 SUPERFAMILY SSF51366 14 240 2.77E-78 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS07105 a3c077e936ebfcddb5a2d3193dcad8c0 241 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 3.3E-55 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS07105 a3c077e936ebfcddb5a2d3193dcad8c0 241 Gene3D G3DSA:3.20.20.70 14 240 2.6E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS07105 a3c077e936ebfcddb5a2d3193dcad8c0 241 PANTHER PTHR32119:SF2 2 241 2.1E-126 T 22-04-2016 APECO1_RS07105 a3c077e936ebfcddb5a2d3193dcad8c0 241 PANTHER PTHR32119 2 241 2.1E-126 T 22-04-2016 APECO1_RS07105 a3c077e936ebfcddb5a2d3193dcad8c0 241 SMART SM00934 16 237 5.7E-99 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS07105 a3c077e936ebfcddb5a2d3193dcad8c0 241 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS07105 a3c077e936ebfcddb5a2d3193dcad8c0 241 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 241 38.689 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS12795 3d3c38dfb538002810cfd72abc37ee60 215 Gene3D G3DSA:3.40.30.10 1 83 7.3E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS12795 3d3c38dfb538002810cfd72abc37ee60 215 SUPERFAMILY SSF52833 1 84 7.18E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS12795 3d3c38dfb538002810cfd72abc37ee60 215 PANTHER PTHR11260:SF285 1 199 1.4E-64 T 22-04-2016 APECO1_RS12795 3d3c38dfb538002810cfd72abc37ee60 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 9.5E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APECO1_RS12795 3d3c38dfb538002810cfd72abc37ee60 215 Gene3D G3DSA:1.20.1050.10 84 198 2.4E-48 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS12795 3d3c38dfb538002810cfd72abc37ee60 215 PANTHER PTHR11260 1 199 1.4E-64 T 22-04-2016 APECO1_RS12795 3d3c38dfb538002810cfd72abc37ee60 215 SUPERFAMILY SSF47616 78 198 6.41E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS12795 3d3c38dfb538002810cfd72abc37ee60 215 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 5.2E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.668 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 SUPERFAMILY SSF53383 929 951 1.28E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 SUPERFAMILY SSF53383 480 889 1.28E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 Pfam PF02347 Glycine cleavage system P-protein 480 739 1.1E-8 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 8.5E-193 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 PANTHER PTHR11773 1 957 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 SUPERFAMILY SSF53383 17 439 1.53E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 PANTHER PTHR11773:SF1 1 957 0.0 T 22-04-2016 APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 Gene3D G3DSA:3.40.640.10 93 305 4.7E-15 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS16470 738b4ef657a98ade2e6db9420bbe147d 957 Gene3D G3DSA:3.40.640.10 504 779 2.9E-43 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS03690 3eb27c078ad558ee99ae3ee4b543bb3b 257 PANTHER PTHR30632 5 254 1.2E-79 T 22-04-2016 APECO1_RS03690 3eb27c078ad558ee99ae3ee4b543bb3b 257 PIRSF PIRSF004846 1 257 2.1E-85 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 APECO1_RS03690 3eb27c078ad558ee99ae3ee4b543bb3b 257 SUPERFAMILY SSF53850 28 255 7.06E-71 T 22-04-2016 APECO1_RS03690 3eb27c078ad558ee99ae3ee4b543bb3b 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 1.1E-88 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 APECO1_RS03690 3eb27c078ad558ee99ae3ee4b543bb3b 257 Gene3D G3DSA:3.40.190.10 219 255 5.6E-17 T 22-04-2016 APECO1_RS03690 3eb27c078ad558ee99ae3ee4b543bb3b 257 Gene3D G3DSA:3.40.190.10 28 109 5.6E-17 T 22-04-2016 APECO1_RS03690 3eb27c078ad558ee99ae3ee4b543bb3b 257 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 7.1E-51 T 22-04-2016 APECO1_RS03690 3eb27c078ad558ee99ae3ee4b543bb3b 257 PANTHER PTHR30632:SF0 5 254 1.2E-79 T 22-04-2016 APECO1_RS03690 3eb27c078ad558ee99ae3ee4b543bb3b 257 Gene3D G3DSA:3.40.190.10 110 218 2.3E-45 T 22-04-2016 APECO1_RS12940 173e7a05f33e34e22f1201d66fde48fd 183 SMART SM00463 95 173 7.9E-23 T 22-04-2016 IPR002625 Smr domain APECO1_RS12940 173e7a05f33e34e22f1201d66fde48fd 183 Pfam PF01713 Smr domain 98 172 1.0E-17 T 22-04-2016 IPR002625 Smr domain APECO1_RS12940 173e7a05f33e34e22f1201d66fde48fd 183 PANTHER PTHR35562:SF1 1 183 8.0E-126 T 22-04-2016 APECO1_RS12940 173e7a05f33e34e22f1201d66fde48fd 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 42.647 T 22-04-2016 IPR022990 Uncharacterised protein family UPF0115 APECO1_RS12940 173e7a05f33e34e22f1201d66fde48fd 183 PANTHER PTHR35562 1 183 8.0E-126 T 22-04-2016 APECO1_RS12940 173e7a05f33e34e22f1201d66fde48fd 183 SUPERFAMILY SSF160443 96 170 2.22E-9 T 22-04-2016 IPR002625 Smr domain APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 331 2.7E-105 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 618 634 7.9E-12 T 22-04-2016 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 7.9E-12 T 22-04-2016 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 7.9E-12 T 22-04-2016 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 SUPERFAMILY SSF51905 467 627 5.72E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 398 3.9E-6 T 22-04-2016 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 619 633 3.9E-6 T 22-04-2016 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 Gene3D G3DSA:3.50.50.60 469 625 3.4E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 Gene3D G3DSA:3.50.50.60 361 459 5.1E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 Gene3D G3DSA:3.20.20.70 3 360 3.3E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 PANTHER PTHR22893:SF25 1 417 2.0E-250 T 22-04-2016 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 SUPERFAMILY SSF51395 1 362 1.69E-109 T 22-04-2016 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 SUPERFAMILY SSF51971 333 519 1.17E-41 T 22-04-2016 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 635 7.3E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS17915 ecb32d8b1f8459532f1617f06c4aee9d 672 PANTHER PTHR22893 1 417 2.0E-250 T 22-04-2016 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 SUPERFAMILY SSF52540 197 373 6.19E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 5.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 5.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 5.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 PANTHER PTHR10229:SF0 1 424 1.3E-181 T 22-04-2016 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 PIRSF PIRSF006809 3 419 5.2E-152 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.496 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.1E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 4.7E-155 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.6E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 SUPERFAMILY SSF54980 365 422 4.03E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 PANTHER PTHR10229 1 424 1.3E-181 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.2E-29 T 22-04-2016 IPR032305 GTP-binding protein, middle domain APECO1_RS24270 3b30588aa906d461fa5cd73634258778 426 Gene3D G3DSA:3.40.50.300 198 361 1.3E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 6.8E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 SUPERFAMILY SSF53850 96 292 6.15E-29 T 22-04-2016 APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 Gene3D G3DSA:3.40.190.10 191 246 2.3E-9 T 22-04-2016 APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 Pfam PF03466 LysR substrate binding domain 97 281 3.4E-27 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 PANTHER PTHR30579 6 301 7.8E-238 T 22-04-2016 APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 Gene3D G3DSA:1.10.10.10 10 91 4.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 SUPERFAMILY SSF46785 11 119 1.14E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 PANTHER PTHR30579:SF4 6 301 7.8E-238 T 22-04-2016 APECO1_RS12725 40de996184562a2cb2a0472fc9247d92 312 Gene3D G3DSA:3.40.190.10 96 190 2.2E-15 T 22-04-2016 APECO1_RS11135 a40b5110ac2037d550bf06c4116e1537 158 Gene3D G3DSA:3.40.140.10 36 158 1.2E-50 T 22-04-2016 APECO1_RS11135 a40b5110ac2037d550bf06c4116e1537 158 PANTHER PTHR30471:SF4 15 158 2.1E-111 T 22-04-2016 APECO1_RS11135 a40b5110ac2037d550bf06c4116e1537 158 PANTHER PTHR30471 15 158 2.1E-111 T 22-04-2016 APECO1_RS11135 a40b5110ac2037d550bf06c4116e1537 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 4.0E-44 T 22-04-2016 IPR001405 RadC protein APECO1_RS11135 a40b5110ac2037d550bf06c4116e1537 158 SUPERFAMILY SSF102712 83 124 7.06E-5 T 22-04-2016 APECO1_RS11135 a40b5110ac2037d550bf06c4116e1537 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APECO1_RS11135 a40b5110ac2037d550bf06c4116e1537 158 Pfam PF04002 RadC-like JAB domain 38 157 6.0E-44 T 22-04-2016 IPR025657 RadC-like JAB domain APECO1_RS09525 3a2e10ec972bbff8a77a50238fff8801 137 Pfam PF01641 SelR domain 9 127 1.5E-54 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APECO1_RS09525 3a2e10ec972bbff8a77a50238fff8801 137 SUPERFAMILY SSF51316 5 133 2.14E-59 T 22-04-2016 IPR011057 Mss4-like APECO1_RS09525 3a2e10ec972bbff8a77a50238fff8801 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 136 6.6E-68 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APECO1_RS09525 3a2e10ec972bbff8a77a50238fff8801 137 PANTHER PTHR10173 6 134 3.8E-63 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APECO1_RS09525 3a2e10ec972bbff8a77a50238fff8801 137 PANTHER PTHR10173:SF18 6 134 3.8E-63 T 22-04-2016 APECO1_RS09525 3a2e10ec972bbff8a77a50238fff8801 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 38.594 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APECO1_RS09525 3a2e10ec972bbff8a77a50238fff8801 137 Gene3D G3DSA:2.170.150.20 4 133 1.5E-61 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APECO1_RS07530 34cfa44dc7b9d8c5d36536beb8ca49f7 221 PANTHER PTHR36701 4 219 1.1E-89 T 22-04-2016 APECO1_RS07530 34cfa44dc7b9d8c5d36536beb8ca49f7 221 Pfam PF02677 Uncharacterized BCR, COG1636 20 194 6.5E-64 T 22-04-2016 IPR003828 Protein of unknown function DUF208 APECO1_RS16705 fb8570c0e78a414e59aca3a077fd1ffa 187 PANTHER PTHR30327:SF1 1 187 1.6E-73 T 22-04-2016 APECO1_RS16705 fb8570c0e78a414e59aca3a077fd1ffa 187 PANTHER PTHR30327 1 187 1.6E-73 T 22-04-2016 APECO1_RS16705 fb8570c0e78a414e59aca3a077fd1ffa 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.617 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 APECO1_RS16705 fb8570c0e78a414e59aca3a077fd1ffa 187 Gene3D G3DSA:3.30.70.1300 41 130 7.3E-29 T 22-04-2016 APECO1_RS16705 fb8570c0e78a414e59aca3a077fd1ffa 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 9.9E-50 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 APECO1_RS16705 fb8570c0e78a414e59aca3a077fd1ffa 187 SUPERFAMILY SSF143456 1 187 4.84E-66 T 22-04-2016 APECO1_RS16705 fb8570c0e78a414e59aca3a077fd1ffa 187 Gene3D G3DSA:3.40.1740.10 2 40 7.9E-36 T 22-04-2016 APECO1_RS16705 fb8570c0e78a414e59aca3a077fd1ffa 187 Gene3D G3DSA:3.40.1740.10 131 177 7.9E-36 T 22-04-2016 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 7.8E-26 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 Gene3D G3DSA:1.10.10.10 1 58 3.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 PANTHER PTHR30363:SF1 1 252 6.2E-127 T 22-04-2016 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 PANTHER PTHR30363 1 252 6.2E-127 T 22-04-2016 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 SMART SM01134 72 233 7.8E-73 T 22-04-2016 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 7.3E-56 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 SUPERFAMILY SSF46785 3 76 1.43E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 Gene3D G3DSA:3.30.750.70 72 153 3.3E-17 T 22-04-2016 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 SMART SM00420 6 58 1.0E-28 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 SUPERFAMILY SSF100950 73 234 5.44E-31 T 22-04-2016 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.8E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS19570 df6b9818547b912e587d9e1b42bf4744 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.8E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS06315 d750a53002c53a281e8f7378b977e246 656 Gene3D G3DSA:2.170.130.10 38 142 1.9E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS06315 d750a53002c53a281e8f7378b977e246 656 Gene3D G3DSA:2.40.170.20 143 656 2.4E-62 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS06315 d750a53002c53a281e8f7378b977e246 656 Pfam PF00593 TonB dependent receptor 425 655 3.9E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS06315 d750a53002c53a281e8f7378b977e246 656 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 639 656 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APECO1_RS06315 d750a53002c53a281e8f7378b977e246 656 SUPERFAMILY SSF56935 37 656 1.41E-86 T 22-04-2016 APECO1_RS06315 d750a53002c53a281e8f7378b977e246 656 PANTHER PTHR32552 40 656 4.4E-26 T 22-04-2016 APECO1_RS06315 d750a53002c53a281e8f7378b977e246 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 139 1.3E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS11455 81f2433eed5404e980cd74997ab4d123 617 PANTHER PTHR30441:SF4 1 615 3.8E-244 T 22-04-2016 APECO1_RS11455 81f2433eed5404e980cd74997ab4d123 617 PANTHER PTHR30441 1 615 3.8E-244 T 22-04-2016 APECO1_RS11455 81f2433eed5404e980cd74997ab4d123 617 Pfam PF05170 AsmA family 226 511 2.1E-23 T 22-04-2016 IPR007844 AsmA APECO1_RS05200 e42ccd874f3fa1c246d7f399ad771169 312 PANTHER PTHR10996 1 310 9.6E-183 T 22-04-2016 APECO1_RS05200 e42ccd874f3fa1c246d7f399ad771169 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 216 232 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APECO1_RS05200 e42ccd874f3fa1c246d7f399ad771169 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 3.9E-45 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APECO1_RS05200 e42ccd874f3fa1c246d7f399ad771169 312 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 312 64.647 T 22-04-2016 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 APECO1_RS05200 e42ccd874f3fa1c246d7f399ad771169 312 SUPERFAMILY SSF51735 99 278 3.28E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS05200 e42ccd874f3fa1c246d7f399ad771169 312 PANTHER PTHR10996:SF114 1 310 9.6E-183 T 22-04-2016 APECO1_RS05200 e42ccd874f3fa1c246d7f399ad771169 312 Gene3D G3DSA:3.40.50.720 94 278 6.9E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS04005 075b27247808530e309bc2a23b972ba0 220 Pfam PF00923 Transaldolase 3 205 7.5E-43 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS04005 075b27247808530e309bc2a23b972ba0 220 PANTHER PTHR10683:SF15 1 220 8.9E-146 T 22-04-2016 APECO1_RS04005 075b27247808530e309bc2a23b972ba0 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 5.0E-84 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS04005 075b27247808530e309bc2a23b972ba0 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS04005 075b27247808530e309bc2a23b972ba0 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS04005 075b27247808530e309bc2a23b972ba0 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 50.571 T 22-04-2016 IPR023001 Fructose-6-phosphate aldolase GO:0016832 APECO1_RS04005 075b27247808530e309bc2a23b972ba0 220 Gene3D G3DSA:3.20.20.70 1 213 1.8E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS04005 075b27247808530e309bc2a23b972ba0 220 SUPERFAMILY SSF51569 1 216 4.19E-61 T 22-04-2016 APECO1_RS04005 075b27247808530e309bc2a23b972ba0 220 PANTHER PTHR10683 1 220 8.9E-146 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS24805 f5ccfca16dc8202ad573d19e559f96f3 182 SUPERFAMILY SSF56935 19 181 1.31E-5 T 22-04-2016 APECO1_RS24805 f5ccfca16dc8202ad573d19e559f96f3 182 Gene3D G3DSA:2.40.230.30 1 181 2.6E-56 T 22-04-2016 APECO1_RS24805 f5ccfca16dc8202ad573d19e559f96f3 182 PANTHER PTHR38105 1 182 1.8E-88 T 22-04-2016 APECO1_RS24805 f5ccfca16dc8202ad573d19e559f96f3 182 PANTHER PTHR38105:SF1 1 182 1.8E-88 T 22-04-2016 APECO1_RS24805 f5ccfca16dc8202ad573d19e559f96f3 182 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 5 180 8.0E-23 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin APECO1_RS23970 29285d039761c2773e48311edbab8f6a 95 Gene3D G3DSA:1.10.10.60 7 88 7.2E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23970 29285d039761c2773e48311edbab8f6a 95 PANTHER PTHR33215:SF4 1 88 1.9E-52 T 22-04-2016 APECO1_RS23970 29285d039761c2773e48311edbab8f6a 95 Pfam PF01527 Transposase 2 74 4.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APECO1_RS23970 29285d039761c2773e48311edbab8f6a 95 PANTHER PTHR33215 1 88 1.9E-52 T 22-04-2016 APECO1_RS23970 29285d039761c2773e48311edbab8f6a 95 SUPERFAMILY SSF46689 1 90 3.05E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20050 99df40b320f7613cd4e9a0cb33341ec6 141 Gene3D G3DSA:3.40.30.10 1 140 4.0E-62 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS20050 99df40b320f7613cd4e9a0cb33341ec6 141 SUPERFAMILY SSF52833 3 137 7.09E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS20050 99df40b320f7613cd4e9a0cb33341ec6 141 PANTHER PTHR30041 1 136 2.1E-56 T 22-04-2016 APECO1_RS20050 99df40b320f7613cd4e9a0cb33341ec6 141 PANTHER PTHR30041:SF0 1 136 2.1E-56 T 22-04-2016 APECO1_RS20050 99df40b320f7613cd4e9a0cb33341ec6 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 2.7E-40 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 APECO1_RS20050 99df40b320f7613cd4e9a0cb33341ec6 141 Pfam PF03960 ArsC family 7 115 1.0E-19 T 22-04-2016 IPR006660 Arsenate reductase-like APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 Gene3D G3DSA:1.10.10.10 170 244 6.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 SUPERFAMILY SSF46785 165 246 2.11E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 SMART SM00100 30 151 2.9E-22 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 PANTHER PTHR24567 5 248 7.9E-136 T 22-04-2016 APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 2.2E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 PANTHER PTHR24567:SF28 5 248 7.9E-136 T 22-04-2016 APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 SMART SM00419 187 235 2.8E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 Gene3D G3DSA:2.60.120.10 18 169 1.6E-40 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 9.8E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 SUPERFAMILY SSF51206 23 162 1.27E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.2E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APECO1_RS07380 1292da009aa32cef15c5f4f65ad64f77 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.2E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APECO1_RS24760 d31fff445f1fda02eaf2b5680b14cebc 343 Gene3D G3DSA:3.40.50.720 172 290 3.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24760 d31fff445f1fda02eaf2b5680b14cebc 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 139 2.3E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS24760 d31fff445f1fda02eaf2b5680b14cebc 343 Gene3D G3DSA:3.90.180.10 7 171 1.8E-37 T 22-04-2016 IPR011032 GroES-like APECO1_RS24760 d31fff445f1fda02eaf2b5680b14cebc 343 PANTHER PTHR11695 15 329 6.3E-244 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS24760 d31fff445f1fda02eaf2b5680b14cebc 343 SUPERFAMILY SSF50129 8 176 8.07E-39 T 22-04-2016 IPR011032 GroES-like APECO1_RS24760 d31fff445f1fda02eaf2b5680b14cebc 343 PANTHER PTHR11695:SF523 15 329 6.3E-244 T 22-04-2016 APECO1_RS24760 d31fff445f1fda02eaf2b5680b14cebc 343 SUPERFAMILY SSF51735 145 303 1.39E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24760 d31fff445f1fda02eaf2b5680b14cebc 343 Pfam PF00107 Zinc-binding dehydrogenase 180 304 3.8E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 Gene3D G3DSA:1.20.1440.90 273 388 1.3E-32 T 22-04-2016 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.3E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 1.3E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 1.3E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.3E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.3E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 1.3E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 1.3E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 PANTHER PTHR30523:SF3 1 883 0.0 T 22-04-2016 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 1.3E-295 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.499 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 PANTHER PTHR30523 1 883 0.0 T 22-04-2016 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 SUPERFAMILY SSF51621 6 883 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS22570 64a80bf195bf73fb64ccb82575452c8c 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APECO1_RS16380 81305d6bc68d9b3ef16489279235fc8c 162 Gene3D G3DSA:3.30.70.20 69 93 8.5E-17 T 22-04-2016 APECO1_RS16380 81305d6bc68d9b3ef16489279235fc8c 162 PANTHER PTHR11938:SF111 1 155 1.1E-68 T 22-04-2016 APECO1_RS16380 81305d6bc68d9b3ef16489279235fc8c 162 PANTHER PTHR11938 1 155 1.1E-68 T 22-04-2016 APECO1_RS16380 81305d6bc68d9b3ef16489279235fc8c 162 SUPERFAMILY SSF54862 4 154 4.5E-41 T 22-04-2016 APECO1_RS16380 81305d6bc68d9b3ef16489279235fc8c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS16380 81305d6bc68d9b3ef16489279235fc8c 162 Pfam PF13247 4Fe-4S dicluster domain 51 140 5.0E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS16380 81305d6bc68d9b3ef16489279235fc8c 162 Gene3D G3DSA:3.30.70.20 6 68 2.0E-11 T 22-04-2016 APECO1_RS16380 81305d6bc68d9b3ef16489279235fc8c 162 Gene3D G3DSA:3.30.70.20 94 154 4.6E-16 T 22-04-2016 APECO1_RS24395 076fa5c27d92895f46b5a2bc832eeb33 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 1.0E-47 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS24395 076fa5c27d92895f46b5a2bc832eeb33 228 PANTHER PTHR22789 1 227 2.2E-138 T 22-04-2016 APECO1_RS24395 076fa5c27d92895f46b5a2bc832eeb33 228 PANTHER PTHR22789:SF2 1 227 2.2E-138 T 22-04-2016 APECO1_RS24395 076fa5c27d92895f46b5a2bc832eeb33 228 SMART SM01007 6 194 1.6E-68 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS24395 076fa5c27d92895f46b5a2bc832eeb33 228 Hamap MF_01952 L-ribulose-5-phosphate 4-epimerase UlaF [ulaF]. 1 228 65.994 T 22-04-2016 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF GO:0008742 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961|UniPathway: UPA00263 APECO1_RS24395 076fa5c27d92895f46b5a2bc832eeb33 228 Gene3D G3DSA:3.40.225.10 2 227 4.1E-73 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS24395 076fa5c27d92895f46b5a2bc832eeb33 228 SUPERFAMILY SSF53639 2 219 8.83E-71 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 4.5E-52 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 Gene3D G3DSA:3.40.50.790 69 159 4.7E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.432 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 PANTHER PTHR23105 21 229 5.9E-82 T 22-04-2016 APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 PIRSF PIRSF002155 1 227 1.9E-78 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 PANTHER PTHR23105:SF5 21 229 5.9E-82 T 22-04-2016 APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 Gene3D G3DSA:3.30.190.20 161 225 5.0E-47 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 Gene3D G3DSA:3.30.190.20 17 68 5.0E-47 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.7E-107 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 SUPERFAMILY SSF56808 6 225 4.45E-83 T 22-04-2016 IPR023674 Ribosomal protein L1-like APECO1_RS22730 aa221aaeffc9e9506e602943921ef46a 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 Gene3D G3DSA:3.20.20.140 55 349 3.1E-97 T 22-04-2016 APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 Pfam PF01979 Amidohydrolase family 50 379 2.2E-48 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 SUPERFAMILY SSF51556 54 350 1.36E-101 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 2.3E-184 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 Gene3D G3DSA:2.30.40.10 2 54 6.3E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 Gene3D G3DSA:2.30.40.10 350 366 6.3E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 PANTHER PTHR11113:SF7 1 382 8.4E-178 T 22-04-2016 APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 PANTHER PTHR11113 1 382 8.4E-178 T 22-04-2016 APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 PIRSF PIRSF038994 1 382 1.6E-114 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APECO1_RS03240 2d55648992a641b3ec35ab2473e31ed0 382 SUPERFAMILY SSF51338 1 53 3.46E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS05275 63eb3d3dd5335136597b057cc2458c17 385 Pfam PF01757 Acyltransferase family 10 356 9.8E-42 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APECO1_RS05275 63eb3d3dd5335136597b057cc2458c17 385 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 1 385 55.486 T 22-04-2016 IPR023723 Glucan biosynthesis protein C GO:0016741 UniPathway: UPA00637 APECO1_RS05275 63eb3d3dd5335136597b057cc2458c17 385 PANTHER PTHR36927 1 380 2.8E-72 T 22-04-2016 APECO1_RS12735 0e01e7407839f231f73069c784a315cb 199 SMART SM00471 26 151 1.8E-7 T 22-04-2016 IPR003607 HD/PDEase domain APECO1_RS12735 0e01e7407839f231f73069c784a315cb 199 PANTHER PTHR11845 3 190 4.6E-51 T 22-04-2016 APECO1_RS12735 0e01e7407839f231f73069c784a315cb 199 SUPERFAMILY SSF109604 2 193 3.43E-45 T 22-04-2016 APECO1_RS12735 0e01e7407839f231f73069c784a315cb 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 43.906 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 APECO1_RS12735 0e01e7407839f231f73069c784a315cb 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 172 5.0E-48 T 22-04-2016 APECO1_RS12735 0e01e7407839f231f73069c784a315cb 199 Gene3D G3DSA:1.10.3210.10 2 194 1.4E-53 T 22-04-2016 IPR006674 HD domain APECO1_RS12735 0e01e7407839f231f73069c784a315cb 199 Pfam PF13023 HD domain 11 160 5.4E-17 T 22-04-2016 IPR006674 HD domain APECO1_RS03995 5cefe32bd3a4fbc6504c8eb183dae350 810 PANTHER PTHR30191:SF6 6 810 0.0 T 22-04-2016 APECO1_RS03995 5cefe32bd3a4fbc6504c8eb183dae350 810 Pfam PF01228 Glycine radical 688 791 7.7E-30 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APECO1_RS03995 5cefe32bd3a4fbc6504c8eb183dae350 810 Gene3D G3DSA:3.20.70.20 8 808 2.0E-269 T 22-04-2016 APECO1_RS03995 5cefe32bd3a4fbc6504c8eb183dae350 810 PIRSF PIRSF000379 55 810 2.8E-199 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APECO1_RS03995 5cefe32bd3a4fbc6504c8eb183dae350 810 PANTHER PTHR30191 6 810 0.0 T 22-04-2016 APECO1_RS03995 5cefe32bd3a4fbc6504c8eb183dae350 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 1.8E-213 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APECO1_RS03995 5cefe32bd3a4fbc6504c8eb183dae350 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 22-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APECO1_RS03995 5cefe32bd3a4fbc6504c8eb183dae350 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APECO1_RS03995 5cefe32bd3a4fbc6504c8eb183dae350 810 SUPERFAMILY SSF51998 7 808 4.58E-233 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PANTHER PTHR33308:SF3 14 294 4.0E-49 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PANTHER PTHR33308 14 294 4.0E-49 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 161 295 2.4E-20 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 SMART SM00047 142 306 1.4E-72 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 213 234 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 257 276 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 235 256 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 113 138 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 147 170 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 295 312 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 191 212 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 9.4E-179 T 22-04-2016 APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 Pfam PF10135 Rod binding protein 50 97 2.1E-17 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal APECO1_RS05455 ac1c9dd2eb79ec84e3ef7193fce4aeb3 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 295 2.8E-131 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- APECO1_RS07225 e9c7328eaa57bd6816b19794a4b7d74f 222 Pfam PF04012 PspA/IM30 family 2 216 1.1E-47 T 22-04-2016 IPR007157 PspA/IM30 APECO1_RS07225 e9c7328eaa57bd6816b19794a4b7d74f 222 PANTHER PTHR31088:SF7 2 221 3.5E-127 T 22-04-2016 APECO1_RS07225 e9c7328eaa57bd6816b19794a4b7d74f 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 7.4E-92 T 22-04-2016 IPR014319 Phage shock protein, PspA APECO1_RS07225 e9c7328eaa57bd6816b19794a4b7d74f 222 PANTHER PTHR31088 2 221 3.5E-127 T 22-04-2016 APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 PANTHER PTHR30266:SF2 1 137 1.6E-58 T 22-04-2016 APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 PANTHER PTHR30266 1 137 1.6E-58 T 22-04-2016 APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 8.9E-15 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 8.9E-15 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 8.9E-15 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 SUPERFAMILY SSF81330 12 127 1.7E-36 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 Gene3D G3DSA:1.20.5.220 121 130 7.2E-4 T 22-04-2016 IPR029027 Single alpha-helix domain APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 1.4E-59 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 31.107 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APECO1_RS18920 b2497a96a3f6f531894396f95a073af8 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 131 5.3E-46 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APECO1_RS02470 de0a7a3f6bb413800e313cbf0f79c5a3 113 SMART SM00530 15 70 2.9E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS02470 de0a7a3f6bb413800e313cbf0f79c5a3 113 Gene3D G3DSA:1.10.260.40 1 88 1.7E-31 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS02470 de0a7a3f6bb413800e313cbf0f79c5a3 113 Pfam PF01381 Helix-turn-helix 16 69 4.6E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS02470 de0a7a3f6bb413800e313cbf0f79c5a3 113 SUPERFAMILY SSF47413 11 88 3.25E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS02470 de0a7a3f6bb413800e313cbf0f79c5a3 113 PANTHER PTHR36924 2 108 1.4E-52 T 22-04-2016 APECO1_RS02470 de0a7a3f6bb413800e313cbf0f79c5a3 113 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 84 3.3E-31 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 APECO1_RS02470 de0a7a3f6bb413800e313cbf0f79c5a3 113 PANTHER PTHR36924:SF2 2 108 1.4E-52 T 22-04-2016 APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 1.6E-4 T 22-04-2016 APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 Gene3D G3DSA:3.40.50.720 1 254 1.1E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PANTHER PTHR24321:SF6 2 255 3.2E-70 T 22-04-2016 APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PANTHER PTHR24321 2 255 3.2E-70 T 22-04-2016 APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 SUPERFAMILY SSF51735 6 255 2.29E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 8.7E-72 T 22-04-2016 APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS13650 016065b18cf4df19503ee7316d8497e9 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.40.50.140 66 129 4.5E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.6E-23 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 PANTHER PTHR30053 1 188 7.8E-96 T 22-04-2016 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.30.30.30 2 64 6.2E-26 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 Gene3D G3DSA:2.40.50.140 130 187 3.6E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.5E-76 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.871 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 PIRSF PIRSF005901 2 188 9.6E-67 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50104 3 63 2.35E-17 T 22-04-2016 IPR008991 Translation protein SH3-like domain APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.2E-26 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 SMART SM01185 69 123 1.6E-26 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50249 70 128 2.31E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 SMART SM00841 131 186 6.9E-33 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 9.7E-23 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APECO1_RS24130 8a819b1319a310a32369306016a392b8 188 SUPERFAMILY SSF50249 130 187 1.2E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS20695 0b6e434b458ab929e1940645c842e3a2 398 PANTHER PTHR13693:SF60 1 397 9.7E-265 T 22-04-2016 APECO1_RS20695 0b6e434b458ab929e1940645c842e3a2 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.96 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 APECO1_RS20695 0b6e434b458ab929e1940645c842e3a2 398 Pfam PF00155 Aminotransferase class I and II 43 387 1.2E-79 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS20695 0b6e434b458ab929e1940645c842e3a2 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APECO1_RS20695 0b6e434b458ab929e1940645c842e3a2 398 Gene3D G3DSA:3.90.1150.10 279 393 9.9E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS20695 0b6e434b458ab929e1940645c842e3a2 398 PANTHER PTHR13693 1 397 9.7E-265 T 22-04-2016 APECO1_RS20695 0b6e434b458ab929e1940645c842e3a2 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 1.6E-224 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 APECO1_RS20695 0b6e434b458ab929e1940645c842e3a2 398 Gene3D G3DSA:3.40.640.10 58 278 1.1E-95 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS20695 0b6e434b458ab929e1940645c842e3a2 398 SUPERFAMILY SSF53383 5 396 2.58E-126 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS21960 166ea462247ef1497a4894264e31d870 162 Gene3D G3DSA:2.30.30.30 112 138 8.5E-4 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APECO1_RS21960 166ea462247ef1497a4894264e31d870 162 PANTHER PTHR30265:SF3 1 158 5.3E-31 T 22-04-2016 APECO1_RS21960 166ea462247ef1497a4894264e31d870 162 PANTHER PTHR30265 1 158 5.3E-31 T 22-04-2016 APECO1_RS21960 166ea462247ef1497a4894264e31d870 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.2E-19 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APECO1_RS21960 166ea462247ef1497a4894264e31d870 162 Gene3D G3DSA:3.30.70.940 2 96 4.5E-17 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APECO1_RS21960 166ea462247ef1497a4894264e31d870 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 48.166 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 APECO1_RS21960 166ea462247ef1497a4894264e31d870 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 4.6E-70 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 APECO1_RS21960 166ea462247ef1497a4894264e31d870 162 SMART SM00738 1 100 1.1E-33 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APECO1_RS21960 166ea462247ef1497a4894264e31d870 162 SUPERFAMILY SSF82679 1 96 1.26E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 6.3E-33 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 PANTHER PTHR11014 7 381 1.4E-233 T 22-04-2016 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 6.5E-173 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 Gene3D G3DSA:3.30.70.360 190 290 2.3E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 Gene3D G3DSA:3.40.630.10 5 189 2.9E-63 T 22-04-2016 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 Gene3D G3DSA:3.40.630.10 323 381 2.9E-63 T 22-04-2016 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 Pfam PF07687 Peptidase dimerisation domain 178 288 5.0E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 SUPERFAMILY SSF55031 181 295 4.78E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 PANTHER PTHR11014:SF75 7 381 1.4E-233 T 22-04-2016 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 SUPERFAMILY SSF53187 305 381 9.29E-59 T 22-04-2016 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 SUPERFAMILY SSF53187 5 180 9.29E-59 T 22-04-2016 APECO1_RS22575 38e24125f7267e16fef3f44402f8d42b 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 67.851 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 APECO1_RS05635 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 Pfam PF00005 ABC transporter 25 173 1.1E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS05635 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 Gene3D G3DSA:3.40.50.300 5 226 6.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05635 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 2.2E-113 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 APECO1_RS05635 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 SUPERFAMILY SSF52540 5 224 8.12E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05635 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 PANTHER PTHR24220 7 226 1.1E-133 T 22-04-2016 APECO1_RS05635 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS05635 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 SMART SM00382 34 222 5.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS05635 c9393f4196dbd6cbfcecd5ecfa7d77c4 233 PANTHER PTHR24220:SF111 7 226 1.1E-133 T 22-04-2016 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF50465 298 393 2.76E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 7.1E-58 T 22-04-2016 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:3.40.50.300 3 208 5.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF52540 6 219 1.94E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:2.40.30.10 209 298 2.7E-37 T 22-04-2016 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 PANTHER PTHR23115:SF151 1 392 0.0 T 22-04-2016 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.5E-34 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 PANTHER PTHR23115 1 392 0.0 T 22-04-2016 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.0E-239 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.095 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 22-04-2016 APECO1_RS19170 d97d0bb0b8c4c3f565cdc0812427d908 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APECO1_RS20545 1430541ecfdc915a59500d557d5cea74 512 Pfam PF00171 Aldehyde dehydrogenase family 33 498 1.7E-164 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS20545 1430541ecfdc915a59500d557d5cea74 512 PANTHER PTHR11699:SF97 3 512 0.0 T 22-04-2016 APECO1_RS20545 1430541ecfdc915a59500d557d5cea74 512 Gene3D G3DSA:3.40.309.10 299 476 9.8E-57 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS20545 1430541ecfdc915a59500d557d5cea74 512 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS20545 1430541ecfdc915a59500d557d5cea74 512 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS20545 1430541ecfdc915a59500d557d5cea74 512 SUPERFAMILY SSF53720 21 505 1.31E-161 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS20545 1430541ecfdc915a59500d557d5cea74 512 Gene3D G3DSA:3.40.605.10 22 298 1.2E-101 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS20545 1430541ecfdc915a59500d557d5cea74 512 PANTHER PTHR11699 3 512 0.0 T 22-04-2016 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 Gene3D G3DSA:3.40.140.10 34 177 2.9E-43 T 22-04-2016 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 PIRSF PIRSF006334 14 293 1.2E-106 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 4.7E-45 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 PANTHER PTHR11644 18 294 9.6E-169 T 22-04-2016 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 49.766 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 139 1.9E-11 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 Gene3D G3DSA:3.40.140.10 189 292 4.2E-25 T 22-04-2016 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 SUPERFAMILY SSF53927 152 293 4.02E-45 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 SUPERFAMILY SSF53927 1 148 6.52E-41 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 PANTHER PTHR11644:SF15 18 294 9.6E-169 T 22-04-2016 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 286 3.8E-86 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APECO1_RS11985 d323ea80c071d35d195ec7b013d7badc 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APECO1_RS04795 7d1892717fe251cf95743c7f235f7330 319 SMART SM00062 28 249 3.5E-37 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS04795 7d1892717fe251cf95743c7f235f7330 319 Gene3D G3DSA:3.40.190.10 110 229 9.4E-32 T 22-04-2016 APECO1_RS04795 7d1892717fe251cf95743c7f235f7330 319 Pfam PF09084 NMT1/THI5 like 67 183 1.2E-12 T 22-04-2016 IPR015168 SsuA/THI5-like APECO1_RS04795 7d1892717fe251cf95743c7f235f7330 319 SUPERFAMILY SSF53850 26 258 6.58E-51 T 22-04-2016 APECO1_RS04795 7d1892717fe251cf95743c7f235f7330 319 PANTHER PTHR30024:SF11 1 310 1.3E-160 T 22-04-2016 APECO1_RS04795 7d1892717fe251cf95743c7f235f7330 319 PANTHER PTHR30024 1 310 1.3E-160 T 22-04-2016 APECO1_RS04795 7d1892717fe251cf95743c7f235f7330 319 Gene3D G3DSA:3.40.190.10 30 80 9.3E-4 T 22-04-2016 APECO1_RS04795 7d1892717fe251cf95743c7f235f7330 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 29 309 2.9E-87 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 APECO1_RS24335 7c0922dd9c51447471b5d25191adbbc6 387 SUPERFAMILY SSF56059 1 169 2.72E-84 T 22-04-2016 APECO1_RS24335 7c0922dd9c51447471b5d25191adbbc6 387 SUPERFAMILY SSF56059 264 384 2.72E-84 T 22-04-2016 APECO1_RS24335 7c0922dd9c51447471b5d25191adbbc6 387 PANTHER PTHR30094 6 387 0.0 T 22-04-2016 APECO1_RS24335 7c0922dd9c51447471b5d25191adbbc6 387 PANTHER PTHR30094:SF5 6 387 0.0 T 22-04-2016 APECO1_RS24335 7c0922dd9c51447471b5d25191adbbc6 387 SUPERFAMILY SSF52440 171 277 7.48E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS24335 7c0922dd9c51447471b5d25191adbbc6 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 15 385 3.7E-151 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain APECO1_RS27500 468b3f5fcd7225b45f00d64b5c43100e 369 PANTHER PTHR30472 92 369 3.0E-137 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS27500 468b3f5fcd7225b45f00d64b5c43100e 369 Pfam PF01032 FecCD transport family 207 367 1.1E-32 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS27500 468b3f5fcd7225b45f00d64b5c43100e 369 Pfam PF01032 FecCD transport family 1 171 1.6E-32 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS27500 468b3f5fcd7225b45f00d64b5c43100e 369 PANTHER PTHR30472:SF16 92 369 3.0E-137 T 22-04-2016 APECO1_RS27500 468b3f5fcd7225b45f00d64b5c43100e 369 SUPERFAMILY SSF81345 2 173 3.92E-31 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS27500 468b3f5fcd7225b45f00d64b5c43100e 369 SUPERFAMILY SSF81345 193 368 7.19E-33 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS27500 468b3f5fcd7225b45f00d64b5c43100e 369 Gene3D G3DSA:1.10.3470.10 1 175 4.4E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS27500 468b3f5fcd7225b45f00d64b5c43100e 369 Gene3D G3DSA:1.10.3470.10 189 368 1.4E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 Pfam PF12796 Ankyrin repeats (3 copies) 78 174 1.0E-9 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 SMART SM00248 38 67 0.0017 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 SMART SM00248 138 172 9.4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 SMART SM00248 176 201 600.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 SMART SM00248 71 100 150.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 SMART SM00248 107 134 980.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 SMART SM00248 5 34 1700.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 PANTHER PTHR24198 12 201 1.3E-42 T 22-04-2016 APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 SUPERFAMILY SSF48403 11 201 1.74E-45 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 Gene3D G3DSA:1.25.40.20 12 201 4.4E-45 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain APECO1_RS01705 37d1e783b3f3a6e2dbe527efca65134d 201 Pfam PF13637 Ankyrin repeats (many copies) 13 59 1.2E-7 T 22-04-2016 APECO1_RS17785 588547ef3c4d62c7c322e82d0e2fdbbf 206 PIRSF PIRSF006158 1 205 3.8E-73 T 22-04-2016 IPR016476 SH3 domain protein APECO1_RS17785 588547ef3c4d62c7c322e82d0e2fdbbf 206 Pfam PF08239 Bacterial SH3 domain 35 85 3.6E-9 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type APECO1_RS17785 588547ef3c4d62c7c322e82d0e2fdbbf 206 SMART SM00287 23 89 8.2E-16 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type APECO1_RS17785 588547ef3c4d62c7c322e82d0e2fdbbf 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 2.9E-53 T 22-04-2016 IPR016476 SH3 domain protein APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 Gene3D G3DSA:3.40.630.30 37 116 4.5E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 2.0E-84 T 22-04-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 PANTHER PTHR40599 1 352 1.7E-285 T 22-04-2016 APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 204 3.8E-11 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 PANTHER PTHR40599:SF2 1 352 1.7E-285 T 22-04-2016 APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 Gene3D G3DSA:3.40.50.620 128 335 4.7E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 PIRSF PIRSF005751 1 351 2.8E-144 T 22-04-2016 IPR005216 Citrate lyase ligase GO:0008771 APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 SUPERFAMILY SSF52374 145 335 3.31E-25 T 22-04-2016 APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 SMART SM00764 147 333 7.7E-135 T 22-04-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 113 338 2.0E-132 T 22-04-2016 APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 342 2.5E-179 T 22-04-2016 IPR005216 Citrate lyase ligase GO:0008771 APECO1_RS03005 9ae99b578fc0484dd23857f4ca6d1ee4 352 SUPERFAMILY SSF55729 34 116 6.45E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 36.028 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 PANTHER PTHR21403 3 299 1.0E-136 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.4E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 200 298 1.1E-33 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 SUPERFAMILY SSF53850 6 224 3.48E-70 T 22-04-2016 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 Gene3D G3DSA:3.40.190.10 2 139 2.0E-54 T 22-04-2016 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.1E-57 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 PANTHER PTHR21403:SF0 3 299 1.0E-136 T 22-04-2016 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 Gene3D G3DSA:3.30.70.120 226 299 1.7E-31 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 2.7E-48 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APECO1_RS11230 ade076102156db772f5271aaa33a8a32 299 SUPERFAMILY SSF54913 226 298 7.11E-22 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APECO1_RS23125 49ff0725186c049cec1c7b5b3fa47486 523 PIRSF PIRSF000858 1 522 2.8E-172 T 22-04-2016 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 APECO1_RS23125 49ff0725186c049cec1c7b5b3fa47486 523 Pfam PF01144 Coenzyme A transferase 9 250 9.8E-25 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS23125 49ff0725186c049cec1c7b5b3fa47486 523 SUPERFAMILY SSF100950 280 518 1.84E-62 T 22-04-2016 APECO1_RS23125 49ff0725186c049cec1c7b5b3fa47486 523 Gene3D G3DSA:3.40.1080.10 7 249 4.3E-54 T 22-04-2016 APECO1_RS23125 49ff0725186c049cec1c7b5b3fa47486 523 Gene3D G3DSA:3.40.810.20 286 509 1.7E-50 T 22-04-2016 APECO1_RS23125 49ff0725186c049cec1c7b5b3fa47486 523 SUPERFAMILY SSF100950 6 267 1.16E-74 T 22-04-2016 APECO1_RS23125 49ff0725186c049cec1c7b5b3fa47486 523 PANTHER PTHR13707:SF38 1 516 1.2E-152 T 22-04-2016 APECO1_RS23125 49ff0725186c049cec1c7b5b3fa47486 523 SMART SM00882 6 251 8.3E-54 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS23125 49ff0725186c049cec1c7b5b3fa47486 523 PANTHER PTHR13707 1 516 1.2E-152 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 SUPERFAMILY SSF52540 368 415 9.24E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 PANTHER PTHR30612 550 901 0.0 T 22-04-2016 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 PANTHER PTHR30612 1 520 0.0 T 22-04-2016 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.957 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 PRINTS PR00906 SecA protein signature 413 426 7.5E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 PRINTS PR00906 SecA protein signature 339 361 7.5E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 PRINTS PR00906 SecA protein signature 101 115 7.5E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 PRINTS PR00906 SecA protein signature 376 393 7.5E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 PRINTS PR00906 SecA protein signature 117 127 7.5E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 PRINTS PR00906 SecA protein signature 63 87 7.5E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 PRINTS PR00906 SecA protein signature 170 190 7.5E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 SUPERFAMILY SSF81886 620 840 2.62E-85 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 SUPERFAMILY SSF81886 877 889 2.62E-85 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 7.7E-69 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Gene3D G3DSA:3.90.1440.10 230 368 7.3E-47 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Gene3D G3DSA:3.40.50.300 417 619 2.5E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Gene3D G3DSA:1.10.3060.10 648 831 6.9E-60 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 SMART SM00957 6 402 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Gene3D G3DSA:3.40.50.300 369 416 2.9E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Gene3D G3DSA:3.40.50.300 2 228 2.9E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Pfam PF02810 SEC-C motif 881 899 9.9E-11 T 22-04-2016 IPR004027 SEC-C motif APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 SUPERFAMILY SSF52540 5 228 9.24E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Pfam PF07517 SecA DEAD-like domain 7 402 9.1E-132 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 SUPERFAMILY SSF81767 227 368 4.58E-44 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.7E-39 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 SMART SM00958 228 358 5.0E-84 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APECO1_RS00530 0f619c6a529d480e6c4e1ee9b04f8b3b 901 SUPERFAMILY SSF52540 416 618 2.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21925 0c58443f77902b98b48e0f00950dd321 251 SUPERFAMILY SSF53335 18 249 6.97E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS21925 0c58443f77902b98b48e0f00950dd321 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APECO1_RS21925 0c58443f77902b98b48e0f00950dd321 251 Gene3D G3DSA:3.40.50.150 23 247 2.8E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS21925 0c58443f77902b98b48e0f00950dd321 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 1.6E-89 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APECO1_RS21925 0c58443f77902b98b48e0f00950dd321 251 PANTHER PTHR10108:SF864 1 251 1.9E-188 T 22-04-2016 APECO1_RS21925 0c58443f77902b98b48e0f00950dd321 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APECO1_RS21925 0c58443f77902b98b48e0f00950dd321 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 250 1.5E-113 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APECO1_RS21925 0c58443f77902b98b48e0f00950dd321 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.615 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APECO1_RS21925 0c58443f77902b98b48e0f00950dd321 251 PANTHER PTHR10108 1 251 1.9E-188 T 22-04-2016 APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 6.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PANTHER PTHR24322 159 190 6.8E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 PANTHER PTHR24322 16 143 6.8E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 SUPERFAMILY SSF51735 10 249 3.31E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 249 5.6E-66 T 22-04-2016 APECO1_RS08690 d96fe20299e9115013c65fc6530979ac 255 Gene3D G3DSA:3.40.50.720 6 249 3.4E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 PANTHER PTHR14969:SF22 157 253 4.2E-106 T 22-04-2016 APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 PANTHER PTHR14969:SF22 1 120 4.2E-106 T 22-04-2016 APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 SMART SM00014 76 227 2.8E-48 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 Pfam PF01569 PAP2 superfamily 77 232 2.5E-34 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 Gene3D G3DSA:1.20.144.10 33 106 1.2E-29 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 Gene3D G3DSA:1.20.144.10 138 241 1.2E-29 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 SUPERFAMILY SSF48317 150 234 2.49E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 SUPERFAMILY SSF48317 16 118 2.49E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 PANTHER PTHR14969 157 253 4.2E-106 T 22-04-2016 APECO1_RS07090 20609f86af64d59c8a00baa3408a2889 254 PANTHER PTHR14969 1 120 4.2E-106 T 22-04-2016 APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 219 5.2E-9 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 SUPERFAMILY SSF49584 136 221 1.31E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 PANTHER PTHR30251 1 224 1.4E-170 T 22-04-2016 APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 SUPERFAMILY SSF49354 15 141 3.66E-39 T 22-04-2016 IPR008962 PapD-like APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 PANTHER PTHR30251:SF10 1 224 1.4E-170 T 22-04-2016 APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 Gene3D G3DSA:2.60.40.360 19 141 1.1E-41 T 22-04-2016 IPR008962 PapD-like APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 19 141 5.4E-40 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 Gene3D G3DSA:2.60.40.1070 148 220 1.1E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 PRINTS PR00969 Pili chaperone signature 97 114 5.3E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 PRINTS PR00969 Pili chaperone signature 158 173 5.3E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 PRINTS PR00969 Pili chaperone signature 69 90 5.3E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 PRINTS PR00969 Pili chaperone signature 123 138 5.3E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS11810 733854ca6e2c094178e66f8452c17b85 224 PRINTS PR00969 Pili chaperone signature 20 29 5.3E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 1.1E-183 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 Gene3D G3DSA:1.20.1250.20 14 192 2.1E-15 T 22-04-2016 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 PANTHER PTHR11654 255 483 2.2E-253 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 PANTHER PTHR11654 12 203 2.2E-253 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 70 94 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 PANTHER PTHR11654:SF102 255 483 2.2E-253 T 22-04-2016 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 PANTHER PTHR11654:SF102 12 203 2.2E-253 T 22-04-2016 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 45.462 T 22-04-2016 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 Pfam PF00854 POT family 82 443 7.1E-99 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 Gene3D G3DSA:1.20.1250.20 279 477 4.7E-6 T 22-04-2016 APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 SUPERFAMILY SSF103473 244 481 1.4E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS20015 1b6050e4bd48617fa1d543138512239b 489 SUPERFAMILY SSF103473 8 200 1.4E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS06340 a1e730210293ac0d58397b68cb46f0e6 340 PANTHER PTHR30535 39 339 3.6E-19 T 22-04-2016 APECO1_RS06340 a1e730210293ac0d58397b68cb46f0e6 340 Pfam PF01497 Periplasmic binding protein 54 278 1.2E-18 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APECO1_RS06340 a1e730210293ac0d58397b68cb46f0e6 340 Gene3D G3DSA:3.40.50.1980 157 297 5.7E-20 T 22-04-2016 APECO1_RS06340 a1e730210293ac0d58397b68cb46f0e6 340 SUPERFAMILY SSF53807 43 307 3.02E-36 T 22-04-2016 APECO1_RS06340 a1e730210293ac0d58397b68cb46f0e6 340 Gene3D G3DSA:3.40.50.1980 42 156 4.6E-12 T 22-04-2016 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 PANTHER PTHR11807 9 431 8.3E-112 T 22-04-2016 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 Pfam PF11734 TilS substrate C-terminal domain 356 425 1.1E-25 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 Gene3D G3DSA:3.40.50.620 7 173 3.7E-12 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 Pfam PF09179 TilS substrate binding domain 241 308 1.7E-19 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 300 23.931 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 SUPERFAMILY SSF56037 318 421 1.91E-31 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 14 196 1.7E-53 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 Pfam PF01171 PP-loop family 14 191 2.0E-61 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 SUPERFAMILY SSF52402 3 226 1.1E-66 T 22-04-2016 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 SUPERFAMILY SSF82829 227 311 1.83E-26 T 22-04-2016 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 PANTHER PTHR11807:SF2 9 431 8.3E-112 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 SMART SM00977 356 427 1.7E-25 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APECO1_RS00990 f1213fd406596b2e17c48da2b8517611 432 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 356 401 1.6E-16 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APECO1_RS20215 b0282e952a0dbcc908967781ee657927 498 Gene3D G3DSA:3.30.830.10 25 252 9.9E-22 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APECO1_RS20215 b0282e952a0dbcc908967781ee657927 498 SUPERFAMILY SSF63411 29 239 2.79E-24 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS20215 b0282e952a0dbcc908967781ee657927 498 Pfam PF05193 Peptidase M16 inactive domain 201 377 1.9E-18 T 22-04-2016 IPR007863 Peptidase M16, C-terminal APECO1_RS20215 b0282e952a0dbcc908967781ee657927 498 Pfam PF00675 Insulinase (Peptidase family M16) 46 164 7.7E-6 T 22-04-2016 IPR011765 Peptidase M16, N-terminal APECO1_RS20215 b0282e952a0dbcc908967781ee657927 498 SUPERFAMILY SSF63411 322 457 4.54E-6 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS20215 b0282e952a0dbcc908967781ee657927 498 PANTHER PTHR11851:SF136 1 491 3.1E-84 T 22-04-2016 APECO1_RS20215 b0282e952a0dbcc908967781ee657927 498 PANTHER PTHR11851 1 491 3.1E-84 T 22-04-2016 APECO1_RS01840 e26093e5129400dae4c53004022a224d 277 Pfam PF00756 Putative esterase 21 268 3.5E-76 T 22-04-2016 IPR000801 Putative esterase APECO1_RS01840 e26093e5129400dae4c53004022a224d 277 SUPERFAMILY SSF53474 1 275 9.46E-83 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS01840 e26093e5129400dae4c53004022a224d 277 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 274 3.8E-120 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APECO1_RS01840 e26093e5129400dae4c53004022a224d 277 Gene3D G3DSA:3.40.50.1820 1 275 2.5E-77 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS01840 e26093e5129400dae4c53004022a224d 277 PANTHER PTHR10061 1 277 7.9E-172 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APECO1_RS05740 74dd21041d8e7695988ffdf14651d6ce 380 Gene3D G3DSA:3.30.160.60 1 68 1.3E-22 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APECO1_RS05740 74dd21041d8e7695988ffdf14651d6ce 380 PANTHER PTHR30349 79 364 1.6E-19 T 22-04-2016 APECO1_RS05740 74dd21041d8e7695988ffdf14651d6ce 380 Gene3D G3DSA:1.10.150.130 84 191 9.0E-31 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS05740 74dd21041d8e7695988ffdf14651d6ce 380 PANTHER PTHR30349:SF20 79 364 1.6E-19 T 22-04-2016 APECO1_RS05740 74dd21041d8e7695988ffdf14651d6ce 380 Gene3D G3DSA:1.10.443.10 194 372 2.4E-44 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS05740 74dd21041d8e7695988ffdf14651d6ce 380 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 1 72 1.2E-31 T 22-04-2016 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 APECO1_RS05740 74dd21041d8e7695988ffdf14651d6ce 380 SUPERFAMILY SSF56349 84 368 5.0E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS05740 74dd21041d8e7695988ffdf14651d6ce 380 Pfam PF00589 Phage integrase family 195 366 8.4E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 1.1E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 1.2E-18 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 152 1.7E-73 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 PANTHER PTHR35805 2 153 6.7E-77 T 22-04-2016 APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 Gene3D G3DSA:3.30.70.140 2 98 6.4E-38 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 Gene3D G3DSA:2.30.30.20 101 152 7.0E-24 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 9.0E-48 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.847 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 SUPERFAMILY SSF54893 2 100 8.24E-36 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 SUPERFAMILY SSF57825 101 151 1.7E-15 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APECO1_RS24650 3b4798139750e07d544a7cf29d8b335c 153 PANTHER PTHR35805:SF1 2 153 6.7E-77 T 22-04-2016 APECO1_RS07685 9ac3849f34ace33f92328c99372ba33a 1077 Pfam PF06791 Prophage tail length tape measure protein 267 471 2.8E-83 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal APECO1_RS07685 9ac3849f34ace33f92328c99372ba33a 1077 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 858 932 5.3E-25 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS07685 9ac3849f34ace33f92328c99372ba33a 1077 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 705 1040 4.8E-66 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS02415 91c5bf6fc14d0ba276d4957d2c5516aa 320 PANTHER PTHR11108 1 317 3.9E-144 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APECO1_RS02415 91c5bf6fc14d0ba276d4957d2c5516aa 320 Pfam PF00762 Ferrochelatase 5 317 3.6E-110 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APECO1_RS02415 91c5bf6fc14d0ba276d4957d2c5516aa 320 SUPERFAMILY SSF53800 4 318 1.31E-100 T 22-04-2016 APECO1_RS02415 91c5bf6fc14d0ba276d4957d2c5516aa 320 Gene3D G3DSA:3.40.50.1400 202 317 3.5E-32 T 22-04-2016 APECO1_RS02415 91c5bf6fc14d0ba276d4957d2c5516aa 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APECO1_RS02415 91c5bf6fc14d0ba276d4957d2c5516aa 320 Gene3D G3DSA:3.40.50.1400 3 201 4.0E-68 T 22-04-2016 APECO1_RS02415 91c5bf6fc14d0ba276d4957d2c5516aa 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 38.291 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APECO1_RS02415 91c5bf6fc14d0ba276d4957d2c5516aa 320 TIGRFAM TIGR00109 hemH: ferrochelatase 1 319 7.7E-135 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 PRINTS PR00690 Adhesin family signature 69 86 4.4E-8 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 PRINTS PR00690 Adhesin family signature 249 267 4.4E-8 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 PRINTS PR00690 Adhesin family signature 196 217 4.4E-8 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 PRINTS PR00690 Adhesin family signature 56 69 4.4E-8 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 PANTHER PTHR30477 4 294 8.1E-98 T 22-04-2016 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 PANTHER PTHR30477:SF1 4 294 8.1E-98 T 22-04-2016 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 Gene3D G3DSA:3.40.50.1980 198 308 1.4E-31 T 22-04-2016 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 SUPERFAMILY SSF53807 27 308 1.91E-74 T 22-04-2016 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 306 1.2E-57 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APECO1_RS09950 2f9047a04ecec2ad5b52dac9b3af05b6 310 Gene3D G3DSA:3.40.50.1980 16 197 9.2E-45 T 22-04-2016 APECO1_RS22625 7e80afa8569435e96b72e79efdcc11e0 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 58 3.4E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS22625 7e80afa8569435e96b72e79efdcc11e0 215 SUPERFAMILY SSF46689 2 77 8.98E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22625 7e80afa8569435e96b72e79efdcc11e0 215 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 1 210 55.11 T 22-04-2016 IPR023764 Transcriptional repressor HTH, FabR APECO1_RS22625 7e80afa8569435e96b72e79efdcc11e0 215 Gene3D G3DSA:1.10.357.10 2 193 3.1E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS22625 7e80afa8569435e96b72e79efdcc11e0 215 PANTHER PTHR30055:SF39 1 215 1.7E-121 T 22-04-2016 APECO1_RS22625 7e80afa8569435e96b72e79efdcc11e0 215 PANTHER PTHR30055 1 215 1.7E-121 T 22-04-2016 APECO1_RS20775 527e433349d66445e6c1224986f9ef24 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS20775 527e433349d66445e6c1224986f9ef24 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.9E-28 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS20775 527e433349d66445e6c1224986f9ef24 55 Pfam PF00471 Ribosomal protein L33 7 53 8.7E-19 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS20775 527e433349d66445e6c1224986f9ef24 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.857 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS20775 527e433349d66445e6c1224986f9ef24 55 PANTHER PTHR15238 1 55 1.5E-25 T 22-04-2016 APECO1_RS20775 527e433349d66445e6c1224986f9ef24 55 SUPERFAMILY SSF57829 1 53 4.27E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APECO1_RS02160 40dfaf740401daf77830923f8804df5c 303 SUPERFAMILY SSF48179 168 289 6.12E-39 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS02160 40dfaf740401daf77830923f8804df5c 303 SUPERFAMILY SSF51735 1 167 1.6E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02160 40dfaf740401daf77830923f8804df5c 303 Gene3D G3DSA:3.40.50.720 1 174 8.1E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02160 40dfaf740401daf77830923f8804df5c 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 1.3E-24 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APECO1_RS02160 40dfaf740401daf77830923f8804df5c 303 PANTHER PTHR21708:SF24 1 303 1.9E-89 T 22-04-2016 APECO1_RS02160 40dfaf740401daf77830923f8804df5c 303 Gene3D G3DSA:1.10.1040.10 175 290 2.7E-45 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS02160 40dfaf740401daf77830923f8804df5c 303 PANTHER PTHR21708 1 303 1.9E-89 T 22-04-2016 APECO1_RS02160 40dfaf740401daf77830923f8804df5c 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 2.7E-37 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APECO1_RS02160 40dfaf740401daf77830923f8804df5c 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 4.1E-75 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 SUPERFAMILY SSF53067 7 128 2.72E-37 T 22-04-2016 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 PANTHER PTHR30005 1 494 0.0 T 22-04-2016 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 SUPERFAMILY SSF53067 132 300 3.02E-41 T 22-04-2016 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 PANTHER PTHR30005:SF2 1 494 0.0 T 22-04-2016 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 Gene3D G3DSA:3.30.420.150 128 300 8.1E-52 T 22-04-2016 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 PIRSF PIRSF001267 1 494 2.4E-188 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 Pfam PF02541 Ppx/GppA phosphatase family 21 301 2.3E-103 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 SUPERFAMILY SSF109604 307 493 2.51E-46 T 22-04-2016 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 Gene3D G3DSA:3.30.420.40 4 127 3.0E-45 T 22-04-2016 APECO1_RS21515 912ea1fedd2b45111509dcdc7fa07541 494 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 55.227 T 22-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APECO1_RS17605 494460408448b3122703110f76f22d08 104 Gene3D G3DSA:3.30.70.900 1 102 9.9E-41 T 22-04-2016 APECO1_RS17605 494460408448b3122703110f76f22d08 104 SUPERFAMILY SSF54909 1 100 8.05E-31 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS17605 494460408448b3122703110f76f22d08 104 PANTHER PTHR33336 1 102 1.3E-23 T 22-04-2016 APECO1_RS17605 494460408448b3122703110f76f22d08 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 6.1E-29 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain APECO1_RS19440 64067a994cc33e4e4d907677b9039ece 186 Gene3D G3DSA:3.90.79.10 9 183 1.9E-42 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS19440 64067a994cc33e4e4d907677b9039ece 186 PANTHER PTHR11839:SF12 3 183 3.2E-109 T 22-04-2016 APECO1_RS19440 64067a994cc33e4e4d907677b9039ece 186 SUPERFAMILY SSF55811 3 182 4.2E-38 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS19440 64067a994cc33e4e4d907677b9039ece 186 Pfam PF00293 NUDIX domain 46 150 8.1E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS19440 64067a994cc33e4e4d907677b9039ece 186 PANTHER PTHR11839 3 183 3.2E-109 T 22-04-2016 APECO1_RS19440 64067a994cc33e4e4d907677b9039ece 186 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS00300 6d157161a6005d37c2ccf3de706c3213 329 SUPERFAMILY SSF53659 5 327 3.2E-117 T 22-04-2016 APECO1_RS00300 6d157161a6005d37c2ccf3de706c3213 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 5.1E-110 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APECO1_RS00300 6d157161a6005d37c2ccf3de706c3213 329 Gene3D G3DSA:3.40.718.10 3 327 2.5E-139 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS00300 6d157161a6005d37c2ccf3de706c3213 329 PANTHER PTHR30004:SF5 1 327 2.2E-228 T 22-04-2016 APECO1_RS00300 6d157161a6005d37c2ccf3de706c3213 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 36.554 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APECO1_RS00300 6d157161a6005d37c2ccf3de706c3213 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 4.8E-132 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APECO1_RS00300 6d157161a6005d37c2ccf3de706c3213 329 PANTHER PTHR30004 1 327 2.2E-228 T 22-04-2016 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 SMART SM00091 262 329 1.3E-10 T 22-04-2016 IPR000014 PAS domain APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 Pfam PF00989 PAS fold 265 369 1.1E-21 T 22-04-2016 IPR013767 PAS fold GO:0006355 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 Gene3D G3DSA:1.10.287.130 382 439 1.6E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 Gene3D G3DSA:3.30.565.10 440 603 3.3E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 SUPERFAMILY SSF55785 253 367 9.77E-19 T 22-04-2016 IPR000014 PAS domain APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 SMART SM00388 388 453 1.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 379 1.5E-16 T 22-04-2016 IPR000014 PAS domain APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 SMART SM00304 212 262 3.3E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 SUPERFAMILY SSF55874 443 602 2.88E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 PANTHER PTHR24423 65 176 2.5E-91 T 22-04-2016 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 PANTHER PTHR24423 249 603 2.5E-91 T 22-04-2016 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 9.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 9.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 9.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 9.7E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 Pfam PF00672 HAMP domain 193 259 5.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 599 5.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 SUPERFAMILY SSF47384 379 452 1.51E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 SMART SM00387 495 602 1.1E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 Gene3D G3DSA:3.30.450.20 256 371 3.9E-23 T 22-04-2016 APECO1_RS12390 1a1f4ab44c98755906b3711636749946 608 Pfam PF00512 His Kinase A (phospho-acceptor) domain 389 450 8.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 3.3E-50 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.6E-67 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 PANTHER PTHR11910 4 176 5.7E-58 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 Gene3D G3DSA:1.10.520.20 3 104 1.9E-35 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.255 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APECO1_RS21315 9493d28b2334a35fbf3a5971f94c0d6b 177 SUPERFAMILY SSF47928 3 102 1.14E-27 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APECO1_RS12750 686577aac277f737d875fe198ea6460a 164 SUPERFAMILY SSF116960 1 164 1.1E-70 T 22-04-2016 APECO1_RS12750 686577aac277f737d875fe198ea6460a 164 Gene3D G3DSA:1.10.287.680 1 52 2.4E-31 T 22-04-2016 IPR023145 YfbU, helix-hairpin domain APECO1_RS12750 686577aac277f737d875fe198ea6460a 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 1.0E-95 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU APECO1_RS12750 686577aac277f737d875fe198ea6460a 164 Pfam PF03887 YfbU domain 1 164 2.9E-69 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU APECO1_RS12750 686577aac277f737d875fe198ea6460a 164 Gene3D G3DSA:1.10.3190.10 53 164 1.4E-51 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain APECO1_RS12750 686577aac277f737d875fe198ea6460a 164 PIRSF PIRSF006272 1 164 2.9E-80 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU APECO1_RS12750 686577aac277f737d875fe198ea6460a 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 40.884 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU APECO1_RS21995 9b30ade4b687437cf107a828e2fd7668 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site APECO1_RS21995 9b30ade4b687437cf107a828e2fd7668 204 SUPERFAMILY SSF54211 3 131 2.77E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS21995 9b30ade4b687437cf107a828e2fd7668 204 Gene3D G3DSA:3.30.70.240 135 204 7.2E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APECO1_RS21995 9b30ade4b687437cf107a828e2fd7668 204 PANTHER PTHR16301 1 202 5.0E-62 T 22-04-2016 IPR023582 Impact family APECO1_RS21995 9b30ade4b687437cf107a828e2fd7668 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 2.5E-26 T 22-04-2016 IPR001498 Impact, N-terminal APECO1_RS21995 9b30ade4b687437cf107a828e2fd7668 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 204 2.4E-87 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal APECO1_RS21995 9b30ade4b687437cf107a828e2fd7668 204 SUPERFAMILY SSF54980 136 203 1.04E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS21995 9b30ade4b687437cf107a828e2fd7668 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 8.1E-15 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal APECO1_RS21995 9b30ade4b687437cf107a828e2fd7668 204 Gene3D G3DSA:3.30.230.30 6 131 4.1E-43 T 22-04-2016 IPR001498 Impact, N-terminal APECO1_RS09630 5ef899dfabc96cbfd6f74467c835b46e 212 PIRSF PIRSF006324 4 212 1.1E-64 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS09630 5ef899dfabc96cbfd6f74467c835b46e 212 PANTHER PTHR30086 5 208 2.7E-142 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS09630 5ef899dfabc96cbfd6f74467c835b46e 212 PANTHER PTHR30086:SF15 5 208 2.7E-142 T 22-04-2016 APECO1_RS09630 5ef899dfabc96cbfd6f74467c835b46e 212 Pfam PF01810 LysE type translocator 18 209 1.1E-58 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 Gene3D G3DSA:1.10.260.40 1 58 1.2E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 8.4E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 PANTHER PTHR30146 1 327 7.2E-190 T 22-04-2016 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 SUPERFAMILY SSF47413 3 51 7.13E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 SMART SM00354 1 74 9.6E-24 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 Pfam PF13377 Periplasmic binding protein-like domain 168 326 2.5E-30 T 22-04-2016 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 Gene3D G3DSA:3.40.50.2300 170 305 1.3E-34 T 22-04-2016 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 SUPERFAMILY SSF53822 76 326 3.14E-39 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 Gene3D G3DSA:3.40.50.2300 76 169 7.0E-7 T 22-04-2016 APECO1_RS17885 9fd5116c64c1b5e19fa15e9a95148285 327 PANTHER PTHR30146:SF28 1 327 7.2E-190 T 22-04-2016 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 Pfam PF07690 Major Facilitator Superfamily 22 412 1.4E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 PANTHER PTHR23501:SF5 2 456 2.5E-166 T 22-04-2016 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 PANTHER PTHR23501 2 456 2.5E-166 T 22-04-2016 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 Gene3D G3DSA:1.20.1250.20 272 448 1.4E-21 T 22-04-2016 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 4.4E-9 T 22-04-2016 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 4.4E-9 T 22-04-2016 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 4.4E-9 T 22-04-2016 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 4.4E-9 T 22-04-2016 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 4.4E-9 T 22-04-2016 APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 SUPERFAMILY SSF103473 251 451 5.23E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 SUPERFAMILY SSF103473 10 195 5.23E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS09790 dc4489023d2c6b80264d274d87ebff3c 457 Gene3D G3DSA:1.20.1250.20 13 198 1.0E-26 T 22-04-2016 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF50447 151 299 4.64E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.7E-294 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:2.40.50.250 483 577 1.9E-40 T 22-04-2016 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 7.5E-58 T 22-04-2016 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.40.50.300 3 205 1.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 9.5E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 PANTHER PTHR23115 3 602 0.0 T 22-04-2016 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.30.70.870 304 399 7.9E-38 T 22-04-2016 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:3.30.70.240 400 478 3.0E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF52540 3 219 1.38E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 PANTHER PTHR23115:SF14 3 602 0.0 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF54980 398 512 2.16E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 134 2.2E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.571213E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.571213E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.571213E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.571213E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.571213E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 Gene3D G3DSA:2.40.30.10 206 303 2.1E-26 T 22-04-2016 APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 Pfam PF00679 Elongation factor G C-terminus 397 477 4.5E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APECO1_RS22120 82f33c2557715805d8af5a024061e004 607 SUPERFAMILY SSF54980 302 387 1.69E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 Gene3D G3DSA:3.30.70.20 173 227 4.4E-37 T 22-04-2016 APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 Gene3D G3DSA:3.30.70.20 30 103 4.4E-37 T 22-04-2016 APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 3.5E-20 T 22-04-2016 IPR015246 Formate dehydrogenase, transmembrane APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 Gene3D G3DSA:3.30.70.20 138 172 1.3E-15 T 22-04-2016 APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 1.2E-145 T 22-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 PIRSF PIRSF036298 1 294 1.4E-163 T 22-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 Pfam PF12800 4Fe-4S binding domain 38 50 0.11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 PANTHER PTHR11938 1 205 1.1E-143 T 22-04-2016 APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 SUPERFAMILY SSF54862 26 262 4.81E-72 T 22-04-2016 APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.1E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 Gene3D G3DSA:1.20.5.480 247 294 1.8E-24 T 22-04-2016 APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 Gene3D G3DSA:3.30.70.20 104 137 1.7E-11 T 22-04-2016 APECO1_RS08165 f9651d6ce468e744fb445bb7398afd44 294 PANTHER PTHR11938:SF84 1 205 1.1E-143 T 22-04-2016 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 SUPERFAMILY SSF56104 3 232 9.81E-76 T 22-04-2016 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 Gene3D G3DSA:3.30.200.20 7 93 3.4E-32 T 22-04-2016 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 Pfam PF01259 SAICAR synthetase 6 230 1.5E-57 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.976 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 PANTHER PTHR11609:SF2 3 236 1.4E-121 T 22-04-2016 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 7.4E-86 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 Gene3D G3DSA:3.30.470.20 94 219 2.4E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APECO1_RS13855 b3550340b861a18dbbd2e853824eb6ea 237 PANTHER PTHR11609 3 236 1.4E-121 T 22-04-2016 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 SMART SM00433 34 624 1.6E-213 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.1E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.1E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.1E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.1E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.1E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.1E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 SUPERFAMILY SSF54211 217 382 2.85E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 Gene3D G3DSA:3.30.565.10 15 215 4.6E-78 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 Gene3D G3DSA:3.30.230.10 217 390 3.4E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 SUPERFAMILY SSF56719 388 621 3.4E-78 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 Gene3D G3DSA:3.40.50.670 398 611 3.9E-77 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 Pfam PF00204 DNA gyrase B 218 384 4.7E-39 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.6E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 Pfam PF01751 Toprim domain 413 521 1.8E-12 T 22-04-2016 IPR006171 Toprim domain APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 SMART SM00387 27 173 3.0E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PANTHER PTHR10169:SF45 1 629 0.0 T 22-04-2016 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 620 2.4E-25 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 SUPERFAMILY SSF55874 5 215 9.47E-70 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.3E-159 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 625 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 47.262 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17640 f083252015fa5ddebc10990a5dbf94e7 630 PANTHER PTHR10169 1 629 0.0 T 22-04-2016 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 PIRSF PIRSF001415 1 323 5.6E-150 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 PANTHER PTHR11458 1 319 4.0E-282 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 PANTHER PTHR11458:SF1 1 319 4.0E-282 T 22-04-2016 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 Gene3D G3DSA:3.20.20.70 2 319 3.9E-139 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 SMART SM01004 3 321 1.2E-211 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 1.25E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 1.25E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 1.25E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 1.25E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 1.25E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 1.25E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 319 1.8E-136 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS01895 28ea057f2be462c5d1aa36c12293c25a 324 SUPERFAMILY SSF51569 4 319 1.03E-129 T 22-04-2016 APECO1_RS08295 c6ab01cd8f717b4eedcc5e9a16968bb8 883 PANTHER PTHR30451 8 883 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS08295 c6ab01cd8f717b4eedcc5e9a16968bb8 883 PANTHER PTHR30451:SF2 8 883 0.0 T 22-04-2016 APECO1_RS08295 c6ab01cd8f717b4eedcc5e9a16968bb8 883 Pfam PF13954 PapC N-terminal domain 43 194 3.3E-45 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APECO1_RS08295 c6ab01cd8f717b4eedcc5e9a16968bb8 883 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 330 340 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APECO1_RS08295 c6ab01cd8f717b4eedcc5e9a16968bb8 883 Pfam PF13953 PapC C-terminal domain 804 867 5.8E-22 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APECO1_RS08295 c6ab01cd8f717b4eedcc5e9a16968bb8 883 SUPERFAMILY SSF141729 41 171 1.44E-33 T 22-04-2016 APECO1_RS08295 c6ab01cd8f717b4eedcc5e9a16968bb8 883 Pfam PF00577 Outer membrane usher protein 213 795 3.2E-200 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624:SF67 787 869 0.0 T 22-04-2016 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624:SF67 472 535 0.0 T 22-04-2016 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624:SF67 363 450 0.0 T 22-04-2016 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624:SF67 553 768 0.0 T 22-04-2016 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624:SF67 75 294 0.0 T 22-04-2016 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 296 1.2E-9 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 Gene3D G3DSA:3.40.50.970 473 705 1.5E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624 787 869 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624 472 535 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624 363 450 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624 553 768 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PANTHER PTHR11624 75 294 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 Gene3D G3DSA:3.40.50.920 707 885 4.1E-77 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 SUPERFAMILY SSF52922 702 885 2.55E-64 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 SUPERFAMILY SSF52518 58 469 4.42E-145 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 PIRSF PIRSF000156 1 887 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 SUPERFAMILY SSF52518 474 701 7.53E-99 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS00630 666e8d43e8f42fad98f2fc513d3e57ef 887 Gene3D G3DSA:3.40.50.970 59 469 1.4E-158 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS15690 d06ee34af324801e8f6d28445ae91c22 423 Gene3D G3DSA:3.50.50.60 4 243 9.8E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS15690 d06ee34af324801e8f6d28445ae91c22 423 Pfam PF12831 FAD dependent oxidoreductase 6 151 3.3E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS15690 d06ee34af324801e8f6d28445ae91c22 423 SUPERFAMILY SSF54373 175 277 1.1E-17 T 22-04-2016 APECO1_RS15690 d06ee34af324801e8f6d28445ae91c22 423 PANTHER PTHR10617 1 406 6.5E-141 T 22-04-2016 APECO1_RS15690 d06ee34af324801e8f6d28445ae91c22 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 5.4E-7 T 22-04-2016 APECO1_RS15690 d06ee34af324801e8f6d28445ae91c22 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 5.4E-7 T 22-04-2016 APECO1_RS15690 d06ee34af324801e8f6d28445ae91c22 423 PANTHER PTHR10617:SF98 1 406 6.5E-141 T 22-04-2016 APECO1_RS15690 d06ee34af324801e8f6d28445ae91c22 423 SUPERFAMILY SSF51905 2 175 1.69E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS15690 d06ee34af324801e8f6d28445ae91c22 423 SUPERFAMILY SSF51905 280 403 1.69E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS02975 d45d04ea020297cbde6fca9c035c2ad2 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 486 4.1E-186 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS02975 d45d04ea020297cbde6fca9c035c2ad2 487 PANTHER PTHR10283:SF13 1 79 9.5E-199 T 22-04-2016 IPR030676 Citrate carrier CitT-related APECO1_RS02975 d45d04ea020297cbde6fca9c035c2ad2 487 PANTHER PTHR10283:SF13 95 485 9.5E-199 T 22-04-2016 IPR030676 Citrate carrier CitT-related APECO1_RS02975 d45d04ea020297cbde6fca9c035c2ad2 487 PIRSF PIRSF002457 1 487 4.2E-163 T 22-04-2016 IPR030676 Citrate carrier CitT-related APECO1_RS02975 d45d04ea020297cbde6fca9c035c2ad2 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 480 6.7E-173 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS02975 d45d04ea020297cbde6fca9c035c2ad2 487 PANTHER PTHR10283 1 79 9.5E-199 T 22-04-2016 APECO1_RS02975 d45d04ea020297cbde6fca9c035c2ad2 487 PANTHER PTHR10283 95 485 9.5E-199 T 22-04-2016 APECO1_RS21860 d3fb83102e5eff7247379c37237675e3 519 PANTHER PTHR11117 33 504 2.6E-104 T 22-04-2016 APECO1_RS21860 d3fb83102e5eff7247379c37237675e3 519 PANTHER PTHR11117:SF10 33 504 2.6E-104 T 22-04-2016 APECO1_RS21860 d3fb83102e5eff7247379c37237675e3 519 SUPERFAMILY SSF52210 183 330 7.46E-18 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS21860 d3fb83102e5eff7247379c37237675e3 519 SUPERFAMILY SSF52210 353 511 2.2E-8 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS21860 d3fb83102e5eff7247379c37237675e3 519 Gene3D G3DSA:3.40.50.261 165 290 4.7E-17 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS21860 d3fb83102e5eff7247379c37237675e3 519 Pfam PF00549 CoA-ligase 350 507 5.2E-55 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS21860 d3fb83102e5eff7247379c37237675e3 519 Pfam PF02629 CoA binding domain 189 284 1.0E-12 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS23190 3268225b18230a81d0d14b0b5bbc0e40 357 PANTHER PTHR11091 3 353 1.5E-72 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS23190 3268225b18230a81d0d14b0b5bbc0e40 357 Gene3D G3DSA:1.10.1530.10 5 73 1.1E-22 T 22-04-2016 APECO1_RS23190 3268225b18230a81d0d14b0b5bbc0e40 357 SUPERFAMILY SSF89733 5 346 4.84E-95 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS23190 3268225b18230a81d0d14b0b5bbc0e40 357 Gene3D G3DSA:3.30.1370.60 74 278 1.2E-70 T 22-04-2016 APECO1_RS23190 3268225b18230a81d0d14b0b5bbc0e40 357 Pfam PF02615 Malate/L-lactate dehydrogenase 6 333 2.5E-95 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS17610 a6e89f24583af1d6ad45f917e298a5c2 295 Gene3D G3DSA:3.40.50.10490 108 266 1.6E-24 T 22-04-2016 APECO1_RS17610 a6e89f24583af1d6ad45f917e298a5c2 295 Gene3D G3DSA:1.10.10.10 14 84 1.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17610 a6e89f24583af1d6ad45f917e298a5c2 295 PANTHER PTHR30514:SF1 14 242 5.0E-23 T 22-04-2016 APECO1_RS17610 a6e89f24583af1d6ad45f917e298a5c2 295 Pfam PF01380 SIS domain 137 246 2.4E-13 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS17610 a6e89f24583af1d6ad45f917e298a5c2 295 PANTHER PTHR30514 14 242 5.0E-23 T 22-04-2016 APECO1_RS17610 a6e89f24583af1d6ad45f917e298a5c2 295 SUPERFAMILY SSF53697 127 268 8.68E-24 T 22-04-2016 APECO1_RS17610 a6e89f24583af1d6ad45f917e298a5c2 295 SUPERFAMILY SSF46689 14 84 1.79E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS17610 a6e89f24583af1d6ad45f917e298a5c2 295 Pfam PF01418 Helix-turn-helix domain, rpiR family 16 81 2.1E-9 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APECO1_RS23615 1f2f63952fb1694c76b9a5d648e7a928 76 Pfam PF06902 Divergent 4Fe-4S mono-cluster 13 76 7.8E-29 T 22-04-2016 IPR010693 Divergent 4Fe-4S mono-cluster APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 PANTHER PTHR11587 1 425 1.0E-177 T 22-04-2016 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 6.3E-170 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 Pfam PF00764 Arginosuccinate synthase 16 410 9.6E-57 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 Gene3D G3DSA:3.90.1260.10 175 372 2.2E-63 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 SUPERFAMILY SSF52402 3 186 6.05E-35 T 22-04-2016 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 SUPERFAMILY SSF69864 190 444 6.8E-81 T 22-04-2016 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 443 77.853 T 22-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 PANTHER PTHR11587:SF2 1 425 1.0E-177 T 22-04-2016 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 Gene3D G3DSA:1.10.287.400 377 440 5.0E-35 T 22-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS18310 05efcf54ad3d1aa02cc96a110aeabb48 447 Gene3D G3DSA:3.40.50.620 4 174 5.8E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS08370 5a0a8af1e14bb80f90f0e72eaaabda01 462 Gene3D G3DSA:3.40.309.10 248 432 4.1E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS08370 5a0a8af1e14bb80f90f0e72eaaabda01 462 PANTHER PTHR11699:SF28 11 461 1.6E-271 T 22-04-2016 APECO1_RS08370 5a0a8af1e14bb80f90f0e72eaaabda01 462 Pfam PF00171 Aldehyde dehydrogenase family 10 457 2.5E-140 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS08370 5a0a8af1e14bb80f90f0e72eaaabda01 462 PANTHER PTHR11699 11 461 1.6E-271 T 22-04-2016 APECO1_RS08370 5a0a8af1e14bb80f90f0e72eaaabda01 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 261 272 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS08370 5a0a8af1e14bb80f90f0e72eaaabda01 462 SUPERFAMILY SSF53720 9 460 1.06E-142 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS08370 5a0a8af1e14bb80f90f0e72eaaabda01 462 Gene3D G3DSA:3.40.605.10 11 247 5.9E-72 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 PANTHER PTHR11472 1 701 0.0 T 22-04-2016 APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 Gene3D G3DSA:3.40.50.300 26 106 2.7E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 Gene3D G3DSA:3.40.50.300 153 168 2.7E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 Gene3D G3DSA:3.40.50.300 211 265 2.7E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 Pfam PF06733 DEAD_2 201 264 1.6E-7 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 SMART SM00488 18 294 0.0062 T 22-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 SUPERFAMILY SSF52540 199 271 4.52E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 SUPERFAMILY SSF52540 46 97 4.52E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 SUPERFAMILY SSF52540 451 465 4.52E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 SUPERFAMILY SSF52540 500 670 4.52E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 SMART SM00491 544 676 4.0E-39 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 Pfam PF13307 Helicase C-terminal domain 532 688 1.1E-23 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 PANTHER PTHR11472:SF32 1 701 0.0 T 22-04-2016 APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 SMART SM00487 23 303 7.6E-6 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS03875 71d174376a7ce90be52672dd24b6fdd8 716 Pfam PF00270 DEAD/DEAH box helicase 31 95 1.3E-5 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Gene3D G3DSA:1.10.10.10 452 503 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF04539 Sigma-70 region 3 458 533 3.4E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 SUPERFAMILY SSF88659 509 611 2.55E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 SUPERFAMILY SSF88946 113 446 1.11E-103 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF04545 Sigma-70, region 4 547 600 8.9E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF04546 Sigma-70, non-essential region 137 348 7.7E-75 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Gene3D G3DSA:1.10.10.10 543 612 1.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 1.4E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 2.8E-30 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 PANTHER PTHR30603 1 150 5.2E-255 T 22-04-2016 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 PANTHER PTHR30603 326 612 5.2E-255 T 22-04-2016 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 SUPERFAMILY SSF88659 452 525 8.78E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 PANTHER PTHR30603:SF0 1 150 5.2E-255 T 22-04-2016 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 PANTHER PTHR30603:SF0 326 612 5.2E-255 T 22-04-2016 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.778 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Gene3D G3DSA:1.10.601.10 110 448 8.7E-140 T 22-04-2016 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 3.5E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 1.3E-120 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17845 2f963b09cac351c0cb2bc0c910bee3d7 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS16620 eccf5d7ff5ca97e18979717d98dfd266 462 SUPERFAMILY SSF52794 369 459 1.96E-22 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS16620 eccf5d7ff5ca97e18979717d98dfd266 462 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 372 454 3.5E-12 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS16620 eccf5d7ff5ca97e18979717d98dfd266 462 PANTHER PTHR30181 1 462 2.4E-269 T 22-04-2016 APECO1_RS16620 eccf5d7ff5ca97e18979717d98dfd266 462 PANTHER PTHR30181:SF2 1 462 2.4E-269 T 22-04-2016 APECO1_RS16620 eccf5d7ff5ca97e18979717d98dfd266 462 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 343 9.8E-145 T 22-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 APECO1_RS16620 eccf5d7ff5ca97e18979717d98dfd266 462 Pfam PF02378 Phosphotransferase system, EIIC 20 277 6.1E-23 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS16620 eccf5d7ff5ca97e18979717d98dfd266 462 Gene3D G3DSA:3.40.50.10370 369 461 2.0E-32 T 22-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 APECO1_RS11000 123d71cbf15e141d76edbb9d814d7746 252 PIRSF PIRSF034405 5 252 6.9E-134 T 22-04-2016 IPR017027 Uncharacterised conserved protein UCP034405 APECO1_RS11000 123d71cbf15e141d76edbb9d814d7746 252 SUPERFAMILY SSF52317 9 251 8.65E-74 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS11000 123d71cbf15e141d76edbb9d814d7746 252 Pfam PF07090 Putative glutamine amidotransferase 9 250 3.5E-114 T 22-04-2016 IPR010768 Putative glutamine amidotransferase APECO1_RS11000 123d71cbf15e141d76edbb9d814d7746 252 Gene3D G3DSA:3.40.50.880 7 252 1.9E-95 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS11000 123d71cbf15e141d76edbb9d814d7746 252 PANTHER PTHR37947 1 252 1.6E-85 T 22-04-2016 APECO1_RS14480 ee3a02eae40f131acbf9a4d779967ba7 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 3.2E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS14480 ee3a02eae40f131acbf9a4d779967ba7 86 PANTHER PTHR24960:SF38 1 85 9.1E-36 T 22-04-2016 APECO1_RS14480 ee3a02eae40f131acbf9a4d779967ba7 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS14480 ee3a02eae40f131acbf9a4d779967ba7 86 PANTHER PTHR24960 1 85 9.1E-36 T 22-04-2016 APECO1_RS14480 ee3a02eae40f131acbf9a4d779967ba7 86 Gene3D G3DSA:3.30.70.20 4 75 1.4E-17 T 22-04-2016 APECO1_RS14480 ee3a02eae40f131acbf9a4d779967ba7 86 SUPERFAMILY SSF54862 5 63 1.93E-17 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 Gene3D G3DSA:2.40.440.10 486 534 1.5E-14 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 Gene3D G3DSA:2.40.440.10 370 419 1.5E-14 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 Pfam PF03734 L,D-transpeptidase catalytic domain 377 543 6.7E-31 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 Pfam PF01471 Putative peptidoglycan binding domain 293 348 2.4E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 SUPERFAMILY SSF141523 375 428 1.19E-20 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 SUPERFAMILY SSF141523 484 533 1.19E-20 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 PANTHER PTHR30582:SF10 54 253 1.4E-285 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 PANTHER PTHR30582:SF10 313 432 1.4E-285 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 PANTHER PTHR30582:SF10 468 615 1.4E-285 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 SUPERFAMILY SSF47090 234 269 8.63E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 SUPERFAMILY SSF47090 314 356 8.63E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 PANTHER PTHR30582 54 253 1.4E-285 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 PANTHER PTHR30582 313 432 1.4E-285 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 PANTHER PTHR30582 468 615 1.4E-285 T 22-04-2016 APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 Gene3D G3DSA:1.10.101.10 314 357 1.9E-22 T 22-04-2016 IPR002477 Peptidoglycan binding-like APECO1_RS04735 b5e00312879d5b21076924eebeb45dee 615 Gene3D G3DSA:1.10.101.10 234 271 1.9E-22 T 22-04-2016 IPR002477 Peptidoglycan binding-like APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 319 1.3E-112 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 Gene3D G3DSA:3.40.50.1000 239 286 8.0E-4 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 Gene3D G3DSA:3.40.50.1000 138 152 8.0E-4 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 PANTHER PTHR30160 1 310 6.3E-107 T 22-04-2016 APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 Gene3D G3DSA:3.40.50.300 45 108 1.1E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 Gene3D G3DSA:3.40.50.300 156 168 1.1E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 SUPERFAMILY SSF52540 46 164 2.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 322 4.2E-125 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 PANTHER PTHR30160:SF13 1 310 6.3E-107 T 22-04-2016 APECO1_RS04685 53e262e3d9b145ca41253f526c2e9577 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 326 40.601 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 139 1.6E-29 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 Pfam PF00107 Zinc-binding dehydrogenase 180 302 5.4E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 Gene3D G3DSA:3.90.180.10 6 171 3.6E-52 T 22-04-2016 IPR011032 GroES-like APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 SUPERFAMILY SSF51735 142 310 2.84E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 PANTHER PTHR11695 14 347 5.6E-153 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 SMART SM00829 9 343 6.0E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 Gene3D G3DSA:3.40.50.720 172 288 5.9E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 SUPERFAMILY SSF50129 11 178 2.28E-48 T 22-04-2016 IPR011032 GroES-like APECO1_RS09505 42eddd0cb74795398f92e9821ac8868d 347 PANTHER PTHR11695:SF501 14 347 5.6E-153 T 22-04-2016 APECO1_RS10780 2a7ed7b5dd6b65d388f8f5db2d0604be 62 Pfam PF05358 DicB protein 1 60 2.2E-41 T 22-04-2016 IPR008022 DicB APECO1_RS10780 2a7ed7b5dd6b65d388f8f5db2d0604be 62 ProDom PD053043 DIVISION CELL INHIBITION INHIBITOR ENCODED DICB PROPHAGE BY WITHIN CP- 1 62 7.0E-27 T 22-04-2016 IPR008022 DicB APECO1_RS07845 953fcac798b61072d84a42ecbba12e8e 286 PANTHER PTHR11732 3 286 7.8E-156 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS07845 953fcac798b61072d84a42ecbba12e8e 286 Pfam PF00248 Aldo/keto reductase family 15 283 7.9E-47 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS07845 953fcac798b61072d84a42ecbba12e8e 286 Gene3D G3DSA:3.20.20.100 12 285 1.2E-59 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS07845 953fcac798b61072d84a42ecbba12e8e 286 PANTHER PTHR11732:SF136 3 286 7.8E-156 T 22-04-2016 APECO1_RS07845 953fcac798b61072d84a42ecbba12e8e 286 SUPERFAMILY SSF51430 11 284 2.49E-62 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS16575 8d7febbe28bd7321554cb697d9c361c0 143 SUPERFAMILY SSF117856 10 140 1.57E-32 T 22-04-2016 APECO1_RS16575 8d7febbe28bd7321554cb697d9c361c0 143 Gene3D G3DSA:3.30.1330.80 13 141 3.4E-45 T 22-04-2016 APECO1_RS16575 8d7febbe28bd7321554cb697d9c361c0 143 PANTHER PTHR34988 1 141 4.8E-38 T 22-04-2016 APECO1_RS16575 8d7febbe28bd7321554cb697d9c361c0 143 Pfam PF03479 Domain of unknown function (DUF296) 14 119 4.5E-22 T 22-04-2016 IPR005175 PPC domain APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 Gene3D G3DSA:3.90.550.10 344 386 2.1E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 Gene3D G3DSA:3.90.550.10 22 301 2.1E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 SUPERFAMILY SSF51161 313 411 2.65E-18 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 Pfam PF00483 Nucleotidyl transferase 22 291 3.2E-69 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 PANTHER PTHR22572:SF10 21 398 7.9E-184 T 22-04-2016 APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.816 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 PANTHER PTHR22572 21 398 7.9E-184 T 22-04-2016 APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 7.2E-157 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 SUPERFAMILY SSF53448 378 393 8.76E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS19650 87443ed830637dbe5391e91ee648d89d 431 SUPERFAMILY SSF53448 20 294 8.76E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS09420 fde4c933ba9cdf2103a1e002237d6fe9 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 89 1.2E-9 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APECO1_RS09420 fde4c933ba9cdf2103a1e002237d6fe9 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 SMART SM00155 133 159 0.012 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 SMART SM00155 352 379 2.9E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 Gene3D G3DSA:3.30.870.10 254 395 1.0E-15 T 22-04-2016 APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 Gene3D G3DSA:3.30.870.10 26 153 5.9E-16 T 22-04-2016 APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 SUPERFAMILY SSF56024 9 208 1.32E-27 T 22-04-2016 APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 PANTHER PTHR12586 1 450 3.4E-289 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 Pfam PF13091 PLD-like domain 257 404 2.4E-23 T 22-04-2016 IPR025202 Phospholipase D-like domain APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 Pfam PF13091 PLD-like domain 40 153 2.1E-6 T 22-04-2016 IPR025202 Phospholipase D-like domain APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 PANTHER PTHR12586:SF3 1 450 3.4E-289 T 22-04-2016 APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 SUPERFAMILY SSF56024 253 395 8.48E-19 T 22-04-2016 APECO1_RS14615 733b113d00017964d4c90f6e6325c31c 451 PIRSF PIRSF000850 1 451 2.1E-269 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 Gene3D G3DSA:3.40.50.700 47 222 2.0E-60 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 37 5.4E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 3.2E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PIRSF PIRSF000310 2 367 1.5E-136 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 365 2.8E-197 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 3.6E-69 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 3.6E-69 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 3.6E-69 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 3.6E-69 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 3.6E-69 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 3.6E-69 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 3.6E-69 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 3.6E-69 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PANTHER PTHR30013:SF8 1 369 5.3E-294 T 22-04-2016 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 PANTHER PTHR30013 1 369 5.3E-294 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 SUPERFAMILY SSF56770 44 302 1.07E-84 T 22-04-2016 APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 302 1.2E-26 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal APECO1_RS17415 557bfd076e53f845aacbe58a6a58980b 372 Gene3D G3DSA:4.10.480.10 224 299 1.2E-31 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal APECO1_RS22945 3f0444b4d3969134a61ae9e5a192d6ec 164 Gene3D G3DSA:3.40.35.10 1 158 3.9E-60 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS22945 3f0444b4d3969134a61ae9e5a192d6ec 164 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 2 151 4.1E-67 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 APECO1_RS22945 3f0444b4d3969134a61ae9e5a192d6ec 164 PANTHER PTHR33799 1 161 8.2E-68 T 22-04-2016 APECO1_RS22945 3f0444b4d3969134a61ae9e5a192d6ec 164 PANTHER PTHR33799:SF3 1 161 8.2E-68 T 22-04-2016 APECO1_RS22945 3f0444b4d3969134a61ae9e5a192d6ec 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 1.5E-51 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS22945 3f0444b4d3969134a61ae9e5a192d6ec 164 SUPERFAMILY SSF52728 1 159 2.35E-53 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 PANTHER PTHR24220:SF151 5 292 1.1E-167 T 22-04-2016 APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 PANTHER PTHR24220 5 292 1.1E-167 T 22-04-2016 APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 SUPERFAMILY SSF52540 4 242 2.8E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 Gene3D G3DSA:2.40.50.140 283 341 1.0E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 Gene3D G3DSA:3.40.50.300 4 235 4.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 SUPERFAMILY SSF50331 237 355 1.41E-28 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 SMART SM00382 29 326 1.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 Gene3D G3DSA:2.40.50.100 240 282 1.7E-9 T 22-04-2016 APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 Gene3D G3DSA:2.40.50.100 342 356 1.7E-9 T 22-04-2016 APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 Pfam PF00005 ABC transporter 21 162 1.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS19740 b1d0ac995b37998b8e2ccd485cf83db6 356 Pfam PF08402 TOBE domain 278 348 1.1E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APECO1_RS20190 d10dbe063a2f14aa2676832b81e3066d 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 8.5E-153 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 APECO1_RS20190 d10dbe063a2f14aa2676832b81e3066d 440 Pfam PF07690 Major Facilitator Superfamily 282 435 3.4E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS20190 d10dbe063a2f14aa2676832b81e3066d 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS20190 d10dbe063a2f14aa2676832b81e3066d 440 PANTHER PTHR23508 3 440 5.2E-240 T 22-04-2016 APECO1_RS20190 d10dbe063a2f14aa2676832b81e3066d 440 Pfam PF00083 Sugar (and other) transporter 23 231 1.6E-24 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS20190 d10dbe063a2f14aa2676832b81e3066d 440 PANTHER PTHR23508:SF16 3 440 5.2E-240 T 22-04-2016 APECO1_RS20190 d10dbe063a2f14aa2676832b81e3066d 440 SUPERFAMILY SSF103473 19 439 7.98E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS20190 d10dbe063a2f14aa2676832b81e3066d 440 Gene3D G3DSA:1.20.1250.20 13 232 1.2E-23 T 22-04-2016 APECO1_RS20190 d10dbe063a2f14aa2676832b81e3066d 440 Gene3D G3DSA:1.20.1250.20 250 438 3.9E-17 T 22-04-2016 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 2.5E-101 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 Gene3D G3DSA:3.20.20.70 1 267 2.1E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.3E-112 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.84 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 PANTHER PTHR10314 74 131 3.1E-30 T 22-04-2016 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 PANTHER PTHR10314 1 51 3.1E-30 T 22-04-2016 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 PANTHER PTHR10314:SF4 74 131 3.1E-30 T 22-04-2016 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 PANTHER PTHR10314:SF4 1 51 3.1E-30 T 22-04-2016 APECO1_RS06975 55236fe49c54c289bd71d2ba2aabccb6 268 SUPERFAMILY SSF51366 1 266 2.92E-91 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS16965 d6eb94c683b350e35d10f754e65fb9e4 89 ProDom PD063034 PERC TRANSCRIPTIONAL PLASMID REGULATOR BFPW ACTIVATOR TRANSCRIPTION DNA-BINDING REGULATION LDAB 1 83 2.0E-42 T 22-04-2016 IPR009277 PerC transcriptional activator APECO1_RS16965 d6eb94c683b350e35d10f754e65fb9e4 89 Pfam PF06069 PerC transcriptional activator 2 87 2.0E-35 T 22-04-2016 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 APECO1_RS13115 fb2217061ae8e8b4a24db79df20bf711 417 Pfam PF11651 P22 coat protein - gene protein 5 1 416 9.0E-68 T 22-04-2016 IPR024659 Major capsid protein Gp5 APECO1_RS13115 fb2217061ae8e8b4a24db79df20bf711 417 ProDom PD140702 CAPSID COAT GP5 DIRECT LATE STRUCTURAL SEQUENCING 11 417 1.0E-32 T 22-04-2016 APECO1_RS15495 06bb8772d3db2264a691f48579396353 608 PANTHER PTHR22773:SF87 1 582 0.0 T 22-04-2016 APECO1_RS15495 06bb8772d3db2264a691f48579396353 608 PANTHER PTHR22773 1 582 0.0 T 22-04-2016 APECO1_RS15495 06bb8772d3db2264a691f48579396353 608 Pfam PF00361 Proton-conducting membrane transporter 124 404 2.0E-38 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APECO1_RS15495 06bb8772d3db2264a691f48579396353 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 7.8E-7 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APECO1_RS15495 06bb8772d3db2264a691f48579396353 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 7.8E-7 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APECO1_RS15495 06bb8772d3db2264a691f48579396353 608 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 154 178 7.8E-7 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APECO1_RS19735 c8cb21753404dddf9af62ca41408bf91 247 Gene3D G3DSA:3.20.20.190 3 240 1.2E-62 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APECO1_RS19735 c8cb21753404dddf9af62ca41408bf91 247 PANTHER PTHR23344:SF20 3 240 5.9E-79 T 22-04-2016 APECO1_RS19735 c8cb21753404dddf9af62ca41408bf91 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 238 1.0E-42 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APECO1_RS19735 c8cb21753404dddf9af62ca41408bf91 247 SUPERFAMILY SSF51695 5 239 7.06E-64 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APECO1_RS19735 c8cb21753404dddf9af62ca41408bf91 247 PANTHER PTHR23344 3 240 5.9E-79 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APECO1_RS19315 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 5.3E-41 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 APECO1_RS19315 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 SUPERFAMILY SSF50022 1 107 3.93E-35 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APECO1_RS19315 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 7.4E-40 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 APECO1_RS19315 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 Gene3D G3DSA:2.102.10.10 2 107 1.8E-40 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APECO1_RS19315 8c9ee1e9c38e6d6ed9ec582fa09ced15 108 PANTHER PTHR40562 1 108 6.7E-71 T 22-04-2016 APECO1_RS11220 6b0c84dbc5eb20aaeb5dc53e86a43edd 84 PANTHER PTHR38039 1 84 1.6E-33 T 22-04-2016 APECO1_RS11220 6b0c84dbc5eb20aaeb5dc53e86a43edd 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 1.1E-38 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 APECO1_RS11220 6b0c84dbc5eb20aaeb5dc53e86a43edd 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 1.8E-42 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 APECO1_RS11220 6b0c84dbc5eb20aaeb5dc53e86a43edd 84 PANTHER PTHR38039:SF1 1 84 1.6E-33 T 22-04-2016 APECO1_RS11220 6b0c84dbc5eb20aaeb5dc53e86a43edd 84 SUPERFAMILY SSF143011 2 83 4.97E-27 T 22-04-2016 APECO1_RS15155 7a1a38a59c9cf77a43a804592f95c3de 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS15155 7a1a38a59c9cf77a43a804592f95c3de 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 1.2E-243 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 APECO1_RS15155 7a1a38a59c9cf77a43a804592f95c3de 482 SUPERFAMILY SSF53720 7 481 1.7E-177 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS15155 7a1a38a59c9cf77a43a804592f95c3de 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 1.5E-176 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS15155 7a1a38a59c9cf77a43a804592f95c3de 482 PANTHER PTHR11699 1 480 1.3E-303 T 22-04-2016 APECO1_RS15155 7a1a38a59c9cf77a43a804592f95c3de 482 Gene3D G3DSA:3.40.605.10 10 268 5.7E-107 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS15155 7a1a38a59c9cf77a43a804592f95c3de 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS15155 7a1a38a59c9cf77a43a804592f95c3de 482 PANTHER PTHR11699:SF49 1 480 1.3E-303 T 22-04-2016 APECO1_RS15155 7a1a38a59c9cf77a43a804592f95c3de 482 Gene3D G3DSA:3.40.309.10 269 453 2.1E-70 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS15145 5cfb00d917c2e9b78ee6390d4c4444da 325 SUPERFAMILY SSF51197 17 323 2.01E-93 T 22-04-2016 APECO1_RS15145 5cfb00d917c2e9b78ee6390d4c4444da 325 Hamap MF_01083 Protein CsiD [csiD]. 1 325 77.535 T 22-04-2016 IPR015038 Uncharacterised protein family CsiD GO:0005506 APECO1_RS15145 5cfb00d917c2e9b78ee6390d4c4444da 325 Pfam PF08943 CsiD 21 314 3.8E-148 T 22-04-2016 IPR015038 Uncharacterised protein family CsiD GO:0005506 APECO1_RS15145 5cfb00d917c2e9b78ee6390d4c4444da 325 Gene3D G3DSA:3.60.130.10 16 325 1.6E-136 T 22-04-2016 APECO1_RS15145 5cfb00d917c2e9b78ee6390d4c4444da 325 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 16 314 1.0E-159 T 22-04-2016 IPR015038 Uncharacterised protein family CsiD GO:0005506 APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 PANTHER PTHR11953 1 238 3.0E-89 T 22-04-2016 APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 50.036 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.1E-115 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.2E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 SUPERFAMILY SSF55666 153 236 2.88E-26 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 SUPERFAMILY SSF54211 1 181 4.2E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 PANTHER PTHR11953:SF0 1 238 3.0E-89 T 22-04-2016 APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 Gene3D G3DSA:3.30.230.70 9 237 1.9E-35 T 22-04-2016 IPR027408 PNPase/RNase PH domain APECO1_RS20810 34270b1049a87a8cb4c8721fd233db61 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 1.6E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APECO1_RS22380 0da58e887f0d36bd578530ea82271257 142 PIRSF PIRSF006276 1 141 6.0E-44 T 22-04-2016 IPR006015 Universal stress protein A APECO1_RS22380 0da58e887f0d36bd578530ea82271257 142 Gene3D G3DSA:3.40.50.620 3 138 2.4E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS22380 0da58e887f0d36bd578530ea82271257 142 SUPERFAMILY SSF52402 3 138 1.05E-22 T 22-04-2016 APECO1_RS22380 0da58e887f0d36bd578530ea82271257 142 Pfam PF00582 Universal stress protein family 3 137 3.0E-19 T 22-04-2016 IPR006016 UspA GO:0006950 APECO1_RS18020 a6784213cd17fa79c58dda7d61e626b3 298 Pfam PF03466 LysR substrate binding domain 96 280 2.2E-18 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS18020 a6784213cd17fa79c58dda7d61e626b3 298 Gene3D G3DSA:1.10.10.10 7 92 3.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18020 a6784213cd17fa79c58dda7d61e626b3 298 Gene3D G3DSA:3.40.190.10 94 177 4.8E-9 T 22-04-2016 APECO1_RS18020 a6784213cd17fa79c58dda7d61e626b3 298 PANTHER PTHR30126 6 295 1.1E-216 T 22-04-2016 APECO1_RS18020 a6784213cd17fa79c58dda7d61e626b3 298 PANTHER PTHR30126:SF22 6 295 1.1E-216 T 22-04-2016 APECO1_RS18020 a6784213cd17fa79c58dda7d61e626b3 298 SUPERFAMILY SSF53850 93 288 1.38E-23 T 22-04-2016 APECO1_RS18020 a6784213cd17fa79c58dda7d61e626b3 298 Gene3D G3DSA:3.40.190.10 178 264 5.0E-10 T 22-04-2016 APECO1_RS18020 a6784213cd17fa79c58dda7d61e626b3 298 SUPERFAMILY SSF46785 8 91 1.69E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18020 a6784213cd17fa79c58dda7d61e626b3 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS25160 ed44947c3eea9c9c452914445b9a8e8a 241 Gene3D G3DSA:1.10.10.10 137 209 1.6E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25160 ed44947c3eea9c9c452914445b9a8e8a 241 SMART SM00421 151 208 3.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS25160 ed44947c3eea9c9c452914445b9a8e8a 241 SUPERFAMILY SSF46894 145 209 4.08E-12 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS25160 ed44947c3eea9c9c452914445b9a8e8a 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 9.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 Gene3D G3DSA:3.20.20.70 1 289 3.7E-144 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 Gene3D G3DSA:1.10.400.20 290 405 1.1E-51 T 22-04-2016 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 SUPERFAMILY SSF51569 1 418 4.94E-167 T 22-04-2016 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 PANTHER PTHR32502 9 178 1.9E-274 T 22-04-2016 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 PANTHER PTHR32502 222 418 1.9E-274 T 22-04-2016 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 Pfam PF08013 Tagatose 6 phosphate kinase 1 418 1.2E-191 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 PANTHER PTHR32502:SF12 9 178 1.9E-274 T 22-04-2016 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 PANTHER PTHR32502:SF12 222 418 1.9E-274 T 22-04-2016 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 3 418 8.1E-211 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 PIRSF PIRSF009264 1 420 4.0E-200 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 APECO1_RS11735 6a04e4ba285ed8a282359ba2da3a0a20 420 Hamap MF_01296 D-tagatose-1,6-bisphosphate aldolase subunit GatZ [gatZ]. 1 420 89.406 T 22-04-2016 IPR023436 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ GO:0019402 UniPathway: UPA00704 APECO1_RS23205 3aa5accbde93c9fab3d20e36d6b4880b 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 1.6E-127 T 22-04-2016 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 APECO1_RS23205 3aa5accbde93c9fab3d20e36d6b4880b 237 Gene3D G3DSA:3.40.50.1000 31 236 3.1E-82 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS23205 3aa5accbde93c9fab3d20e36d6b4880b 237 SUPERFAMILY SSF56784 31 237 2.33E-76 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS23205 3aa5accbde93c9fab3d20e36d6b4880b 237 PIRSF PIRSF017818 1 237 1.5E-123 T 22-04-2016 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 APECO1_RS23205 3aa5accbde93c9fab3d20e36d6b4880b 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 11 220 3.3E-50 T 22-04-2016 IPR005519 Acid phosphatase, class B-like APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 269 348 2.9E-20 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 6 20 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 PANTHER PTHR11405 1 352 1.0E-201 T 22-04-2016 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 Gene3D G3DSA:1.10.1030.10 242 351 4.8E-32 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 SUPERFAMILY SSF48108 238 351 2.22E-29 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 PANTHER PTHR11405:SF5 1 352 1.0E-201 T 22-04-2016 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 46 65 1.0E-51 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 10 22 1.0E-51 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 81 98 1.0E-51 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 139 168 1.0E-51 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 222 240 1.0E-51 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 Gene3D G3DSA:3.30.470.20 42 241 7.9E-77 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 SUPERFAMILY SSF56059 2 243 7.95E-102 T 22-04-2016 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 Gene3D G3DSA:3.30.1490.20 1 41 5.2E-20 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 139 146 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 SMART SM01096 266 352 2.6E-25 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS26805 8b0ae40ccda9d3fac00b99e9547214d8 352 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 1 176 2.6E-69 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 PANTHER PTHR30146 1 335 2.1E-286 T 22-04-2016 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.0E-36 T 22-04-2016 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 SUPERFAMILY SSF47413 1 59 1.56E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 Gene3D G3DSA:3.40.50.2300 167 330 2.5E-52 T 22-04-2016 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 SUPERFAMILY SSF53822 60 333 2.36E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 SMART SM00354 1 71 5.9E-37 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.1E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 PANTHER PTHR30146:SF57 1 335 2.1E-286 T 22-04-2016 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 Gene3D G3DSA:3.40.50.2300 58 166 2.9E-45 T 22-04-2016 APECO1_RS16230 6d0e840d2694d8405db10848fbd7e62c 343 Gene3D G3DSA:1.10.260.40 2 57 8.7E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 Gene3D G3DSA:2.10.70.20 151 198 4.8E-22 T 22-04-2016 APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 6 195 3.5E-51 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 PANTHER PTHR39583 1 195 5.6E-35 T 22-04-2016 APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 Pfam PF13633 Prokaryotic N-terminal methylation site 6 27 1.3E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 Gene3D G3DSA:3.10.610.10 38 148 2.4E-42 T 22-04-2016 APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 Pfam PF11612 Type II secretion system (T2SS), protein J 58 193 3.6E-34 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 PANTHER PTHR39583:SF1 1 195 5.6E-35 T 22-04-2016 APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 SUPERFAMILY SSF54523 46 197 5.49E-43 T 22-04-2016 APECO1_RS17205 4aa9dbe67402875cef41ab6aa1f03111 201 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 9.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 Gene3D G3DSA:2.120.10.80 39 159 2.2E-38 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 Gene3D G3DSA:2.120.10.80 191 363 2.2E-38 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 1 368 45.397 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 Pfam PF01344 Kelch motif 75 122 7.4E-9 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 PANTHER PTHR23244 1 145 6.6E-44 T 22-04-2016 APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 PANTHER PTHR23244 178 359 6.6E-44 T 22-04-2016 APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 22 359 2.5E-144 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 SUPERFAMILY SSF117281 191 356 3.14E-37 T 22-04-2016 APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 SUPERFAMILY SSF117281 40 156 3.14E-37 T 22-04-2016 APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 PANTHER PTHR23244:SF303 1 145 6.6E-44 T 22-04-2016 APECO1_RS24800 5a358668ca28f8a5c266853cacd6124d 368 PANTHER PTHR23244:SF303 178 359 6.6E-44 T 22-04-2016 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 Gene3D G3DSA:3.40.50.300 312 565 2.9E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 Gene3D G3DSA:3.40.50.300 12 270 2.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 SUPERFAMILY SSF52540 314 563 1.11E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 PANTHER PTHR24220 340 450 3.0E-245 T 22-04-2016 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 280 9.2E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 543 575 4.3E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 SUPERFAMILY SSF52540 12 268 6.14E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 Pfam PF00005 ABC transporter 341 491 6.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 Pfam PF00005 ABC transporter 33 196 1.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 PANTHER PTHR24220 14 312 3.0E-245 T 22-04-2016 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 SMART SM00382 41 246 4.5E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 SMART SM00382 349 549 1.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 PANTHER PTHR24220:SF442 14 312 3.0E-245 T 22-04-2016 APECO1_RS04025 39760f36b03e6a1912aae07cdc93c7f3 623 PANTHER PTHR24220:SF442 340 450 3.0E-245 T 22-04-2016 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PANTHER PTHR30013:SF9 1 367 0.0 T 22-04-2016 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 SUPERFAMILY SSF56770 46 310 9.03E-87 T 22-04-2016 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 Gene3D G3DSA:4.10.480.10 227 310 1.6E-38 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 2 360 4.0E-203 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PANTHER PTHR30013 1 367 0.0 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 Gene3D G3DSA:3.40.50.700 49 226 1.7E-56 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PIRSF PIRSF000310 5 357 5.8E-146 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 1.0E-118 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 1.0E-118 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 1.0E-118 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 1.0E-118 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 1.0E-118 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 1.0E-118 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 159 183 1.0E-118 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 1.0E-118 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 1.0E-118 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 1.4E-28 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 308 1.4E-31 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal APECO1_RS04950 2c981817e91ee833bc698268a797c90b 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 45 1.1E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 SUPERFAMILY SSF51971 551 786 8.24E-49 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Gene3D G3DSA:3.50.50.60 776 851 3.2E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 SUPERFAMILY SSF46548 396 561 3.66E-20 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Gene3D G3DSA:3.50.50.60 549 626 2.0E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 PANTHER PTHR11938 454 854 6.7E-66 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1027 0.0 T 22-04-2016 IPR017701 Putative selenate reductase YgfK APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 PRINTS PR00419 Adrenodoxin reductase family signature 552 574 3.3E-16 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 PRINTS PR00419 Adrenodoxin reductase family signature 575 588 3.3E-16 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 PRINTS PR00419 Adrenodoxin reductase family signature 681 695 3.3E-16 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 552 840 2.0E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 SUPERFAMILY SSF46548 872 963 1.1E-9 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 453 532 6.7E-16 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Gene3D G3DSA:1.10.1060.10 418 548 5.4E-25 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Gene3D G3DSA:1.10.1060.10 887 952 6.5E-12 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Gene3D G3DSA:3.20.20.70 293 367 8.2E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Gene3D G3DSA:3.20.20.70 43 88 8.2E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Gene3D G3DSA:3.20.20.70 154 260 8.2E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 SUPERFAMILY SSF51395 205 257 3.4E-12 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 SUPERFAMILY SSF51395 287 405 3.4E-12 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 SUPERFAMILY SSF51395 44 140 3.4E-12 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 938 949 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 PANTHER PTHR11938:SF108 454 854 6.7E-66 T 22-04-2016 APECO1_RS16345 8a31f97ebdee8194b8a7d7a4f1176a83 1032 Gene3D G3DSA:3.50.50.60 634 775 7.0E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS06355 e4ae87dd3443975115802dd3354b47a2 210 SMART SM01120 32 206 1.1E-79 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APECO1_RS06355 e4ae87dd3443975115802dd3354b47a2 210 Pfam PF02734 DAK2 domain 32 204 9.2E-55 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APECO1_RS06355 e4ae87dd3443975115802dd3354b47a2 210 PANTHER PTHR28629 1 210 4.2E-83 T 22-04-2016 APECO1_RS06355 e4ae87dd3443975115802dd3354b47a2 210 SUPERFAMILY SSF101473 2 204 3.66E-57 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APECO1_RS06355 e4ae87dd3443975115802dd3354b47a2 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 5.3E-82 T 22-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- APECO1_RS25010 98b9acadcb9fb7be34c627f34a5511fe 392 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 380 1.2E-134 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB APECO1_RS25010 98b9acadcb9fb7be34c627f34a5511fe 392 PANTHER PTHR23537:SF1 1 392 4.3E-117 T 22-04-2016 APECO1_RS25010 98b9acadcb9fb7be34c627f34a5511fe 392 Gene3D G3DSA:1.20.1250.20 17 196 3.3E-8 T 22-04-2016 APECO1_RS25010 98b9acadcb9fb7be34c627f34a5511fe 392 Gene3D G3DSA:1.20.1250.20 212 379 1.8E-14 T 22-04-2016 APECO1_RS25010 98b9acadcb9fb7be34c627f34a5511fe 392 SUPERFAMILY SSF103473 12 380 1.31E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS25010 98b9acadcb9fb7be34c627f34a5511fe 392 PANTHER PTHR23537 1 392 4.3E-117 T 22-04-2016 APECO1_RS13295 ed743691dbb5a02b4ad4b3723ee5ac55 27 ProDom PD051924 ORF56 GP44 EAE-ABC2 GENE HKAI GP38 ORF10 1 27 3.0E-7 T 22-04-2016 IPR020295 Protein of unknown function DUF2737 APECO1_RS13295 ed743691dbb5a02b4ad4b3723ee5ac55 27 Pfam PF10930 Protein of unknown function (DUF2737) 1 26 3.8E-11 T 22-04-2016 IPR020295 Protein of unknown function DUF2737 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 5.0E-74 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 Pfam PF01330 RuvA N terminal domain 2 62 4.3E-20 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 PANTHER PTHR33796 2 201 8.1E-83 T 22-04-2016 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.86 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 SUPERFAMILY SSF46929 157 201 7.59E-11 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:2.40.50.140 2 64 1.5E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.4E-16 T 22-04-2016 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:1.10.8.10 157 200 2.4E-23 T 22-04-2016 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 Gene3D G3DSA:1.10.150.20 67 138 3.2E-31 T 22-04-2016 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 SUPERFAMILY SSF47781 66 137 9.18E-22 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 SMART SM00278 73 92 1.3 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 SMART SM00278 108 127 0.05 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 Pfam PF07499 RuvA, C-terminal domain 159 201 2.3E-15 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APECO1_RS09970 6dea786b6f8d6b227aab6944d807fc31 203 SUPERFAMILY SSF50249 2 63 7.42E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 53.779 T 22-04-2016 IPR023721 Multidrug resistance protein MdtD, putative APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 413 3.1E-71 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 Gene3D G3DSA:1.20.1250.20 10 193 3.8E-31 T 22-04-2016 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 Gene3D G3DSA:1.20.1250.20 257 459 6.3E-14 T 22-04-2016 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 SUPERFAMILY SSF103473 244 452 6.15E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 SUPERFAMILY SSF103473 8 194 6.15E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 Pfam PF07690 Major Facilitator Superfamily 15 405 1.1E-49 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 PANTHER PTHR23501 1 468 0.0 T 22-04-2016 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 4.0E-8 T 22-04-2016 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.0E-8 T 22-04-2016 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.0E-8 T 22-04-2016 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 4.0E-8 T 22-04-2016 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 4.0E-8 T 22-04-2016 APECO1_RS11515 2c701582b22aded8f9972d7e2973cd4a 471 PANTHER PTHR23501:SF36 1 468 0.0 T 22-04-2016 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 SUPERFAMILY SSF55347 176 488 5.56E-113 T 22-04-2016 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 PANTHER PTHR23429 1 489 2.5E-229 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 PANTHER PTHR23429:SF0 1 489 2.5E-229 T 22-04-2016 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 2.6E-57 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 SUPERFAMILY SSF51735 4 189 4.53E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 6.4E-116 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 Gene3D G3DSA:3.30.360.10 186 487 1.0E-121 T 22-04-2016 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 9.2E-206 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.898 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 8.6E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 8.6E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 8.6E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 8.6E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 8.6E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 Gene3D G3DSA:3.40.50.720 7 185 2.1E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09920 24da661793c7aebd9b0c6bfe4f5b895d 491 PIRSF PIRSF000110 1 491 6.8E-180 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 Gene3D G3DSA:2.40.50.140 1 65 1.9E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 PANTHER PTHR11544:SF52 1 74 4.3E-48 T 22-04-2016 APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 40 58 2.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 25 34 2.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 PRINTS PR00050 Cold shock protein signature 4 19 2.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 2.1E-43 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 SUPERFAMILY SSF50249 1 66 8.57E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 PIRSF PIRSF002599 1 74 2.9E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 SMART SM00357 3 67 6.1E-29 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 PANTHER PTHR11544 1 74 4.3E-48 T 22-04-2016 APECO1_RS04290 2af9790425e583c73e4c4e65cf6a70d1 74 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.4E-29 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 PANTHER PTHR22939:SF101 1 455 1.9E-219 T 22-04-2016 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 Pfam PF13180 PDZ domain 285 358 1.6E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 8.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 8.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 8.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 8.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 8.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 8.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 SUPERFAMILY SSF50156 386 451 1.97E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 SMART SM00228 267 349 3.6E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 SMART SM00228 374 447 1.8E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 443 2.1E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 Gene3D G3DSA:2.30.42.10 387 452 3.6E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 Gene3D G3DSA:2.40.10.10 39 154 1.9E-34 T 22-04-2016 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 453 3.8E-160 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 SUPERFAMILY SSF50494 39 262 6.35E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 PANTHER PTHR22939 1 455 1.9E-219 T 22-04-2016 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 SUPERFAMILY SSF50156 225 350 1.18E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 Gene3D G3DSA:2.30.42.10 269 364 1.6E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 Gene3D G3DSA:2.40.10.10 156 268 2.2E-43 T 22-04-2016 APECO1_RS18580 790ad1e33aee9cf2e165066637ee40fd 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 5.0E-30 T 22-04-2016 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 8.6E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 8.6E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 8.6E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 8.6E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 8.6E-34 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 PANTHER PTHR11778:SF0 1 429 4.6E-226 T 22-04-2016 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 Gene3D G3DSA:1.10.287.40 1 104 2.4E-29 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 PIRSF PIRSF001529 1 430 6.3E-186 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 Gene3D G3DSA:3.30.930.10 105 427 1.5E-142 T 22-04-2016 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 SUPERFAMILY SSF46589 1 112 1.41E-32 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.9E-34 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 2.1E-185 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 8.7E-36 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 PANTHER PTHR11778 1 429 4.6E-226 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.817 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APECO1_RS04385 5428c38a6a43a1cd085e19ad69956708 430 SUPERFAMILY SSF55681 116 424 1.11E-99 T 22-04-2016 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SUPERFAMILY SSF55073 687 845 2.12E-46 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SUPERFAMILY SSF55785 309 419 1.16E-21 T 22-04-2016 IPR000014 PAS domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Pfam PF00990 Diguanylate cyclase, GGDEF domain 682 838 1.9E-45 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Pfam PF05231 MASE1 19 294 3.9E-34 T 22-04-2016 IPR007895 MASE1 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SUPERFAMILY SSF141868 899 1094 1.14E-15 T 22-04-2016 IPR001633 EAL domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SMART SM00086 629 671 0.021 T 22-04-2016 IPR001610 PAC motif APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SMART SM00086 502 543 1.8E-5 T 22-04-2016 IPR001610 PAC motif APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SMART SM00086 375 417 3.6E-9 T 22-04-2016 IPR001610 PAC motif APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SMART SM00091 555 623 5.0E-8 T 22-04-2016 IPR000014 PAS domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SMART SM00091 429 496 0.35 T 22-04-2016 IPR000014 PAS domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SMART SM00091 302 368 1.7E-11 T 22-04-2016 IPR000014 PAS domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Pfam PF08448 PAS fold 561 672 2.3E-10 T 22-04-2016 IPR013656 PAS fold-4 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Pfam PF00563 EAL domain 894 1087 8.9E-18 T 22-04-2016 IPR001633 EAL domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 PANTHER PTHR24423:SF477 1080 1090 2.2E-181 T 22-04-2016 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 PANTHER PTHR24423:SF477 52 560 2.2E-181 T 22-04-2016 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SMART SM00052 855 1095 3.8E-43 T 22-04-2016 IPR001633 EAL domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Gene3D G3DSA:3.30.70.270 684 847 9.1E-52 T 22-04-2016 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Gene3D G3DSA:3.30.450.20 425 541 8.3E-16 T 22-04-2016 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Gene3D G3DSA:3.30.450.20 295 414 3.3E-23 T 22-04-2016 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Pfam PF13426 PAS domain 314 416 5.8E-11 T 22-04-2016 IPR000014 PAS domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Pfam PF08447 PAS fold 452 537 8.7E-10 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SUPERFAMILY SSF55785 541 669 5.32E-19 T 22-04-2016 IPR000014 PAS domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Gene3D G3DSA:3.30.450.20 542 669 8.4E-18 T 22-04-2016 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SUPERFAMILY SSF55785 438 545 1.15E-14 T 22-04-2016 IPR000014 PAS domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 Gene3D G3DSA:3.20.20.450 900 1094 1.6E-19 T 22-04-2016 IPR001633 EAL domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 PANTHER PTHR24423 1080 1090 2.2E-181 T 22-04-2016 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 PANTHER PTHR24423 52 560 2.2E-181 T 22-04-2016 APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 422 4.9E-35 T 22-04-2016 IPR000014 PAS domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 553 676 5.4E-13 T 22-04-2016 IPR000014 PAS domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 680 842 1.7E-37 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS11470 07986e77055ee34ac68051f2e770d65f 1105 SMART SM00267 671 843 3.5E-67 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 13 396 1.5E-155 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 Pfam PF03222 Tryptophan/tyrosine permease family 7 403 2.2E-149 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PANTHER PTHR32195:SF18 3 411 2.6E-191 T 22-04-2016 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 294 313 8.0E-102 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 349 368 8.0E-102 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 194 216 8.0E-102 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 16 39 8.0E-102 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 233 252 8.0E-102 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 328 346 8.0E-102 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 154 174 8.0E-102 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 43 62 8.0E-102 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PRINTS PR00166 Aromatic amino acid permease signature 88 108 8.0E-102 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 23 39 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site APECO1_RS21190 bfca53b1b4b09ae579a671a7d36d9b08 415 PANTHER PTHR32195 3 411 2.6E-191 T 22-04-2016 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 7.7E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 9.2E-19 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 2.8E-14 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 1.7E-4 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Gene3D G3DSA:1.10.10.400 226 313 1.2E-25 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Gene3D G3DSA:2.40.50.140 619 694 1.2E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Gene3D G3DSA:3.30.230.70 4 225 2.7E-84 T 22-04-2016 IPR027408 PNPase/RNase PH domain APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Gene3D G3DSA:3.30.230.70 314 542 5.2E-88 T 22-04-2016 IPR027408 PNPase/RNase PH domain APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Pfam PF00013 KH domain 557 614 4.6E-9 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 SUPERFAMILY SSF50249 608 693 8.91E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 SUPERFAMILY SSF54211 4 144 3.64E-50 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 SMART SM00316 620 690 1.6E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Pfam PF00575 S1 RNA binding domain 619 690 5.9E-23 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Gene3D G3DSA:3.30.1370.10 552 618 1.1E-26 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 SUPERFAMILY SSF46915 226 325 1.15E-25 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 SUPERFAMILY SSF54791 554 622 1.29E-17 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 PANTHER PTHR11252 2 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 SMART SM00322 552 617 1.2E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 PIRSF PIRSF005499 2 710 3.6E-302 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 4.1E-26 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.614 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 SUPERFAMILY SSF55666 145 235 2.1E-31 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 SUPERFAMILY SSF55666 450 548 1.68E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APECO1_RS18270 b078faf8fa0d69181ab397db296567fd 711 SUPERFAMILY SSF54211 301 492 2.68E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 Pfam PF01966 HD domain 229 328 3.1E-12 T 22-04-2016 IPR006674 HD domain APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 Gene3D G3DSA:1.10.3090.10 122 359 2.1E-56 T 22-04-2016 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 SUPERFAMILY SSF81301 2 119 2.4E-32 T 22-04-2016 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 SUPERFAMILY SSF81891 120 403 4.71E-55 T 22-04-2016 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 PANTHER PTHR13734 386 401 8.0E-78 T 22-04-2016 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 PANTHER PTHR13734 1 301 8.0E-78 T 22-04-2016 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.952 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 54.62 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 Gene3D G3DSA:3.30.460.10 2 121 1.3E-31 T 22-04-2016 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 PIRSF PIRSF000813 1 408 9.5E-208 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 Pfam PF01743 Poly A polymerase head domain 3 122 1.1E-18 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APECO1_RS17790 4c1b14665e6d813ab2f4417559fe1f66 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 212 8.3E-16 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 PANTHER PTHR24096 124 715 0.0 T 22-04-2016 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 SUPERFAMILY SSF56801 205 713 1.19E-93 T 22-04-2016 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 PANTHER PTHR24096:SF177 124 715 0.0 T 22-04-2016 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 Gene3D G3DSA:3.40.50.980 377 532 3.1E-40 T 22-04-2016 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 Gene3D G3DSA:2.30.38.10 533 609 2.6E-13 T 22-04-2016 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 SMART SM00563 30 140 2.5E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 Gene3D G3DSA:3.40.50.980 233 376 1.6E-15 T 22-04-2016 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 Pfam PF01553 Acyltransferase 15 137 3.5E-19 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 Pfam PF00501 AMP-binding enzyme 233 619 4.4E-66 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 49.175 T 22-04-2016 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 Gene3D G3DSA:3.30.300.30 617 716 1.1E-8 T 22-04-2016 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 SUPERFAMILY SSF69593 3 171 1.31E-21 T 22-04-2016 APECO1_RS16225 5302fa14619b9467f33b566a78f97e72 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS01555 ae8f113e9c3cd72d27d4013bb342c581 306 PANTHER PTHR17630 4 306 1.4E-58 T 22-04-2016 APECO1_RS01555 ae8f113e9c3cd72d27d4013bb342c581 306 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 13 137 8.2E-9 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 APECO1_RS01555 ae8f113e9c3cd72d27d4013bb342c581 306 SUPERFAMILY SSF53474 5 145 1.5E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS01555 ae8f113e9c3cd72d27d4013bb342c581 306 SUPERFAMILY SSF53474 229 306 1.5E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS01555 ae8f113e9c3cd72d27d4013bb342c581 306 SUPERFAMILY SSF53474 173 202 1.5E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS01555 ae8f113e9c3cd72d27d4013bb342c581 306 PANTHER PTHR17630:SF49 4 306 1.4E-58 T 22-04-2016 APECO1_RS01555 ae8f113e9c3cd72d27d4013bb342c581 306 Gene3D G3DSA:3.40.50.1820 4 306 6.1E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS06380 1acea1fd8e0a35126912722cba9822e3 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APECO1_RS06380 1acea1fd8e0a35126912722cba9822e3 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 36.382 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APECO1_RS06380 1acea1fd8e0a35126912722cba9822e3 194 PANTHER PTHR17224 2 194 3.3E-85 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APECO1_RS06380 1acea1fd8e0a35126912722cba9822e3 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APECO1_RS06380 1acea1fd8e0a35126912722cba9822e3 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 187 9.7E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APECO1_RS06380 1acea1fd8e0a35126912722cba9822e3 194 PANTHER PTHR17224:SF1 2 194 3.3E-85 T 22-04-2016 APECO1_RS06380 1acea1fd8e0a35126912722cba9822e3 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 2.6E-74 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APECO1_RS06380 1acea1fd8e0a35126912722cba9822e3 194 SUPERFAMILY SSF53178 3 192 8.11E-71 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APECO1_RS06380 1acea1fd8e0a35126912722cba9822e3 194 Gene3D G3DSA:3.40.50.1470 3 192 4.1E-72 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APECO1_RS10955 ea3064b40bc7930f9359609b9e3f76a3 247 PANTHER PTHR34148:SF1 1 247 2.9E-60 T 22-04-2016 APECO1_RS10955 ea3064b40bc7930f9359609b9e3f76a3 247 PANTHER PTHR34148 1 247 2.9E-60 T 22-04-2016 APECO1_RS10955 ea3064b40bc7930f9359609b9e3f76a3 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 48.968 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 APECO1_RS10955 ea3064b40bc7930f9359609b9e3f76a3 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 246 5.0E-92 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 APECO1_RS10955 ea3064b40bc7930f9359609b9e3f76a3 247 Pfam PF02654 Cobalamin-5-phosphate synthase 9 244 5.0E-54 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 1.4E-125 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.5E-78 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.5E-78 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.5E-78 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 2.5E-78 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.5E-78 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.5E-78 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 2.5E-78 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.5E-78 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.5E-78 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.3E-41 T 22-04-2016 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 4.3E-41 T 22-04-2016 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.3E-41 T 22-04-2016 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 4.3E-41 T 22-04-2016 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.3E-41 T 22-04-2016 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PANTHER PTHR22912:SF48 1 315 7.4E-168 T 22-04-2016 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 SUPERFAMILY SSF51905 2 315 1.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 Gene3D G3DSA:3.50.50.60 4 110 1.0E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 3.4E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 Gene3D G3DSA:3.50.50.60 111 308 1.8E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS04360 86f444b121e8114f589ba37f58b1e3ee 321 PANTHER PTHR22912 1 315 7.4E-168 T 22-04-2016 APECO1_RS20475 a602045be6602b08e6009d7fd91a4d7a 417 Gene3D G3DSA:3.40.640.10 61 266 1.1E-39 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS20475 a602045be6602b08e6009d7fd91a4d7a 417 Pfam PF00155 Aminotransferase class I and II 165 391 3.5E-21 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS20475 a602045be6602b08e6009d7fd91a4d7a 417 PANTHER PTHR11751:SF419 11 415 3.0E-192 T 22-04-2016 APECO1_RS20475 a602045be6602b08e6009d7fd91a4d7a 417 PANTHER PTHR11751 11 415 3.0E-192 T 22-04-2016 APECO1_RS20475 a602045be6602b08e6009d7fd91a4d7a 417 Gene3D G3DSA:3.90.1150.10 267 410 1.3E-15 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS20475 a602045be6602b08e6009d7fd91a4d7a 417 SUPERFAMILY SSF53383 26 411 1.93E-58 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS15630 3112361c36b3e51d2697ad92e4e5b30d 236 Gene3D G3DSA:3.90.550.10 6 233 6.0E-79 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS15630 3112361c36b3e51d2697ad92e4e5b30d 236 PANTHER PTHR32125 8 236 2.0E-86 T 22-04-2016 APECO1_RS15630 3112361c36b3e51d2697ad92e4e5b30d 236 SUPERFAMILY SSF53448 8 227 5.85E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS15630 3112361c36b3e51d2697ad92e4e5b30d 236 PANTHER PTHR32125:SF4 8 236 2.0E-86 T 22-04-2016 APECO1_RS15630 3112361c36b3e51d2697ad92e4e5b30d 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 230 31.0 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS15630 3112361c36b3e51d2697ad92e4e5b30d 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 4.7E-81 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS15630 3112361c36b3e51d2697ad92e4e5b30d 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS15630 3112361c36b3e51d2697ad92e4e5b30d 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 4.3E-95 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 Pfam PF08442 ATP-grasp domain 2 205 7.2E-63 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 PANTHER PTHR11815 1 387 4.6E-198 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 PIRSF PIRSF001554 1 389 5.2E-146 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 260 284 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 Pfam PF00549 CoA-ligase 265 383 2.2E-24 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 SUPERFAMILY SSF56059 1 241 1.9E-63 T 22-04-2016 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 389 38.305 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 388 2.3E-148 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 Gene3D G3DSA:3.40.50.261 243 387 1.5E-64 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 SUPERFAMILY SSF52210 242 388 5.36E-53 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 PANTHER PTHR11815:SF1 1 387 4.6E-198 T 22-04-2016 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 Gene3D G3DSA:3.30.470.20 97 242 2.7E-51 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS23175 0210e92b81f0c8230050cb20d69afecf 389 Gene3D G3DSA:3.30.1490.20 24 96 2.9E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS12450 609f4935dd36998f9456fe94efdc990b 240 PANTHER PTHR10108:SF910 1 240 1.9E-177 T 22-04-2016 APECO1_RS12450 609f4935dd36998f9456fe94efdc990b 240 Gene3D G3DSA:3.40.50.150 28 222 1.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS12450 609f4935dd36998f9456fe94efdc990b 240 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 2.8E-91 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APECO1_RS12450 609f4935dd36998f9456fe94efdc990b 240 Pfam PF13489 Methyltransferase domain 57 170 4.2E-25 T 22-04-2016 APECO1_RS12450 609f4935dd36998f9456fe94efdc990b 240 SUPERFAMILY SSF53335 17 224 3.01E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS12450 609f4935dd36998f9456fe94efdc990b 240 PANTHER PTHR10108 1 240 1.9E-177 T 22-04-2016 APECO1_RS12450 609f4935dd36998f9456fe94efdc990b 240 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.443 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APECO1_RS10800 0aa26fdd1e6df57e004b10868f7e44fe 341 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 67 145 2.1E-7 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APECO1_RS10800 0aa26fdd1e6df57e004b10868f7e44fe 341 Gene3D G3DSA:1.10.443.10 164 319 7.0E-29 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS10800 0aa26fdd1e6df57e004b10868f7e44fe 341 Gene3D G3DSA:1.10.150.130 61 160 2.2E-14 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS10800 0aa26fdd1e6df57e004b10868f7e44fe 341 Pfam PF00589 Phage integrase family 168 288 8.3E-9 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS10800 0aa26fdd1e6df57e004b10868f7e44fe 341 SUPERFAMILY SSF56349 61 319 6.47E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS10800 0aa26fdd1e6df57e004b10868f7e44fe 341 PANTHER PTHR30349 61 287 1.8E-24 T 22-04-2016 APECO1_RS10800 0aa26fdd1e6df57e004b10868f7e44fe 341 PANTHER PTHR30349:SF20 61 287 1.8E-24 T 22-04-2016 APECO1_RS16875 8ec8b87ead87c3826d4aa0ab9f10cfc3 195 Gene3D G3DSA:2.60.40.1090 47 195 4.9E-26 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS16875 8ec8b87ead87c3826d4aa0ab9f10cfc3 195 PANTHER PTHR33420 43 195 7.9E-15 T 22-04-2016 APECO1_RS16875 8ec8b87ead87c3826d4aa0ab9f10cfc3 195 SUPERFAMILY SSF49401 48 195 6.46E-33 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS13755 b19944c5b86bebc641af396f14376889 338 PANTHER PTHR23406:SF30 215 338 1.7E-68 T 22-04-2016 APECO1_RS13755 b19944c5b86bebc641af396f14376889 338 PANTHER PTHR23406 215 338 1.7E-68 T 22-04-2016 APECO1_RS13755 b19944c5b86bebc641af396f14376889 338 Gene3D G3DSA:3.40.50.10750 135 296 1.8E-63 T 22-04-2016 APECO1_RS13755 b19944c5b86bebc641af396f14376889 338 PIRSF PIRSF000428 1 326 3.2E-109 T 22-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APECO1_RS13755 b19944c5b86bebc641af396f14376889 338 Pfam PF01515 Phosphate acetyl/butaryl transferase 2 320 2.3E-123 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APECO1_RS13755 b19944c5b86bebc641af396f14376889 338 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 17 319 2.3E-99 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APECO1_RS13755 b19944c5b86bebc641af396f14376889 338 SUPERFAMILY SSF53659 2 321 1.11E-82 T 22-04-2016 APECO1_RS15585 d54fa690230c34b0369b2bd610ffbfd6 454 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 454 1.3E-103 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS15585 d54fa690230c34b0369b2bd610ffbfd6 454 PANTHER PTHR30354:SF2 1 454 1.4E-275 T 22-04-2016 APECO1_RS15585 d54fa690230c34b0369b2bd610ffbfd6 454 Pfam PF02447 GntP family permease 5 451 3.1E-155 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS15585 d54fa690230c34b0369b2bd610ffbfd6 454 PANTHER PTHR30354 1 454 1.4E-275 T 22-04-2016 APECO1_RS15585 d54fa690230c34b0369b2bd610ffbfd6 454 PIRSF PIRSF002746 1 454 2.7E-152 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS01920 d950a6ddbc5a926ab1c6b95da7102777 406 PANTHER PTHR11384:SF3 71 404 5.4E-45 T 22-04-2016 APECO1_RS01920 d950a6ddbc5a926ab1c6b95da7102777 406 Pfam PF05992 SbmA/BacA-like family 80 393 1.9E-166 T 22-04-2016 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 APECO1_RS01920 d950a6ddbc5a926ab1c6b95da7102777 406 PANTHER PTHR11384 71 404 5.4E-45 T 22-04-2016 APECO1_RS01920 d950a6ddbc5a926ab1c6b95da7102777 406 SUPERFAMILY SSF90123 78 389 1.77E-6 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS08600 6916987669a45e098150ebab9efb4ecc 344 PANTHER PTHR21716 1 344 8.6E-242 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APECO1_RS08600 6916987669a45e098150ebab9efb4ecc 344 Pfam PF01594 Domain of unknown function DUF20 14 328 9.6E-77 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APECO1_RS08600 6916987669a45e098150ebab9efb4ecc 344 PANTHER PTHR21716:SF18 1 344 8.6E-242 T 22-04-2016 APECO1_RS16630 b20eeca7a6f2ceacd1ce67e9fa407d3a 302 SMART SM00244 31 193 5.3E-12 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS16630 b20eeca7a6f2ceacd1ce67e9fa407d3a 302 PANTHER PTHR10264 16 263 5.4E-58 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS16630 b20eeca7a6f2ceacd1ce67e9fa407d3a 302 PANTHER PTHR10264:SF78 16 263 5.4E-58 T 22-04-2016 APECO1_RS16630 b20eeca7a6f2ceacd1ce67e9fa407d3a 302 Pfam PF01145 SPFH domain / Band 7 family 35 210 1.9E-28 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS16630 b20eeca7a6f2ceacd1ce67e9fa407d3a 302 SUPERFAMILY SSF117892 62 197 1.7E-11 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS11225 62f87881f58f77a8358f450a95407e24 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 2.8E-25 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APECO1_RS11225 62f87881f58f77a8358f450a95407e24 83 Gene3D G3DSA:3.40.1620.10 1 51 3.9E-11 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APECO1_RS11225 62f87881f58f77a8358f450a95407e24 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 56 1.4E-13 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APECO1_RS11225 62f87881f58f77a8358f450a95407e24 83 PANTHER PTHR33713:SF6 1 83 9.7E-29 T 22-04-2016 APECO1_RS11225 62f87881f58f77a8358f450a95407e24 83 PANTHER PTHR33713 1 83 9.7E-29 T 22-04-2016 APECO1_RS11225 62f87881f58f77a8358f450a95407e24 83 SUPERFAMILY SSF143120 1 81 1.26E-26 T 22-04-2016 APECO1_RS19180 329dd917b7479daf246d50f2cdcec458 156 PANTHER PTHR11205 1 156 1.1E-95 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APECO1_RS19180 329dd917b7479daf246d50f2cdcec458 156 SUPERFAMILY SSF47973 6 149 6.15E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain APECO1_RS19180 329dd917b7479daf246d50f2cdcec458 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.1E-64 T 22-04-2016 IPR023798 Ribosomal protein S7 domain APECO1_RS19180 329dd917b7479daf246d50f2cdcec458 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 APECO1_RS19180 329dd917b7479daf246d50f2cdcec458 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.6E-71 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APECO1_RS19180 329dd917b7479daf246d50f2cdcec458 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.173 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APECO1_RS19180 329dd917b7479daf246d50f2cdcec458 156 PIRSF PIRSF002122 3 156 1.5E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APECO1_RS19180 329dd917b7479daf246d50f2cdcec458 156 Gene3D G3DSA:1.10.455.10 8 156 2.9E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain APECO1_RS10485 88671c71eef4921051fb5edb743f2383 283 Hamap MF_01046 Molecular chaperone Hsp31 and glyoxalase 3 [hchA]. 1 283 66.632 T 22-04-2016 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 GO:0016829|GO:0042026 KEGG: 00620+4.2.1.130|MetaCyc: PWY-901 APECO1_RS10485 88671c71eef4921051fb5edb743f2383 283 PANTHER PTHR11019:SF109 1 113 2.0E-114 T 22-04-2016 APECO1_RS10485 88671c71eef4921051fb5edb743f2383 283 PANTHER PTHR11019:SF109 131 271 2.0E-114 T 22-04-2016 APECO1_RS10485 88671c71eef4921051fb5edb743f2383 283 Gene3D G3DSA:3.40.50.880 2 278 3.8E-85 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS10485 88671c71eef4921051fb5edb743f2383 283 Pfam PF01965 DJ-1/PfpI family 75 266 2.7E-6 T 22-04-2016 IPR002818 DJ-1/PfpI APECO1_RS10485 88671c71eef4921051fb5edb743f2383 283 PANTHER PTHR11019 1 113 2.0E-114 T 22-04-2016 APECO1_RS10485 88671c71eef4921051fb5edb743f2383 283 PANTHER PTHR11019 131 271 2.0E-114 T 22-04-2016 APECO1_RS10485 88671c71eef4921051fb5edb743f2383 283 SUPERFAMILY SSF52317 7 278 3.19E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS10485 88671c71eef4921051fb5edb743f2383 283 PIRSF PIRSF037798 1 283 2.4E-148 T 22-04-2016 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 GO:0016829|GO:0042026 KEGG: 00620+4.2.1.130|MetaCyc: PWY-901 APECO1_RS17710 ace7e4c2f995253436b746eb290d1661 56 Pfam PF13260 Protein of unknown function (DUF4051) 1 50 4.0E-25 T 22-04-2016 IPR025125 Protein of unknown function DUF4051 APECO1_RS20725 2c25116f28753c2a51a8b69e3c16b593 342 PANTHER PTHR13778 19 312 1.8E-39 T 22-04-2016 APECO1_RS20725 2c25116f28753c2a51a8b69e3c16b593 342 Pfam PF01501 Glycosyl transferase family 8 25 276 2.2E-63 T 22-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 APECO1_RS20725 2c25116f28753c2a51a8b69e3c16b593 342 Pfam PF08437 Glycosyl transferase family 8 C-terminal 278 334 5.5E-17 T 22-04-2016 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 UniPathway: UPA00958 APECO1_RS20725 2c25116f28753c2a51a8b69e3c16b593 342 SUPERFAMILY SSF53448 25 296 7.59E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS20725 2c25116f28753c2a51a8b69e3c16b593 342 PANTHER PTHR13778:SF10 19 312 1.8E-39 T 22-04-2016 APECO1_RS20725 2c25116f28753c2a51a8b69e3c16b593 342 Gene3D G3DSA:3.90.550.10 24 295 5.6E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS05025 0531fd014610252729d0757e19736508 900 Gene3D G3DSA:1.20.120.160 793 895 7.6E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS05025 0531fd014610252729d0757e19736508 900 Gene3D G3DSA:3.40.50.2300 671 789 4.2E-23 T 22-04-2016 APECO1_RS05025 0531fd014610252729d0757e19736508 900 SUPERFAMILY SSF55874 487 653 3.67E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS05025 0531fd014610252729d0757e19736508 900 SUPERFAMILY SSF52172 670 796 1.42E-23 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS05025 0531fd014610252729d0757e19736508 900 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 2 795 8.4E-266 T 22-04-2016 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 APECO1_RS05025 0531fd014610252729d0757e19736508 900 SMART SM00387 547 654 3.8E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS05025 0531fd014610252729d0757e19736508 900 SMART SM00304 344 397 6.4E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS05025 0531fd014610252729d0757e19736508 900 Gene3D G3DSA:1.10.287.130 426 493 8.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS05025 0531fd014610252729d0757e19736508 900 SMART SM00073 808 896 1.7E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS05025 0531fd014610252729d0757e19736508 900 SMART SM00388 433 498 4.0E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS05025 0531fd014610252729d0757e19736508 900 Pfam PF00072 Response regulator receiver domain 675 782 2.1E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PANTHER PTHR24423:SF542 338 376 5.2E-234 T 22-04-2016 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PANTHER PTHR24423:SF542 15 48 5.2E-234 T 22-04-2016 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PANTHER PTHR24423:SF542 412 825 5.2E-234 T 22-04-2016 APECO1_RS05025 0531fd014610252729d0757e19736508 900 SUPERFAMILY SSF47226 794 896 2.88E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS05025 0531fd014610252729d0757e19736508 900 SUPERFAMILY SSF47384 416 498 6.67E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS05025 0531fd014610252729d0757e19736508 900 Pfam PF00672 HAMP domain 323 396 2.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS05025 0531fd014610252729d0757e19736508 900 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 653 1.8E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS05025 0531fd014610252729d0757e19736508 900 PANTHER PTHR24423 338 376 5.2E-234 T 22-04-2016 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PANTHER PTHR24423 15 48 5.2E-234 T 22-04-2016 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PANTHER PTHR24423 412 825 5.2E-234 T 22-04-2016 APECO1_RS05025 0531fd014610252729d0757e19736508 900 Pfam PF00512 His Kinase A (phospho-acceptor) domain 433 498 1.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS05025 0531fd014610252729d0757e19736508 900 Gene3D G3DSA:3.30.565.10 503 656 7.7E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS05025 0531fd014610252729d0757e19736508 900 SMART SM00448 672 784 3.8E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS05025 0531fd014610252729d0757e19736508 900 Pfam PF01627 Hpt domain 817 895 1.4E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PIRSF PIRSF036437 1 797 0.0 T 22-04-2016 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 651 8.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 632 8.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 611 8.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS05025 0531fd014610252729d0757e19736508 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 597 8.8E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22620 145144769e46c1842763f30c80de6530 438 Gene3D G3DSA:1.20.1250.20 18 230 5.9E-25 T 22-04-2016 APECO1_RS22620 145144769e46c1842763f30c80de6530 438 Gene3D G3DSA:1.20.1250.20 255 435 1.7E-12 T 22-04-2016 APECO1_RS22620 145144769e46c1842763f30c80de6530 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS22620 145144769e46c1842763f30c80de6530 438 Pfam PF07690 Major Facilitator Superfamily 27 385 1.2E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS22620 145144769e46c1842763f30c80de6530 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 81 97 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS22620 145144769e46c1842763f30c80de6530 438 PANTHER PTHR23508 18 432 1.4E-103 T 22-04-2016 APECO1_RS22620 145144769e46c1842763f30c80de6530 438 SUPERFAMILY SSF103473 14 435 1.12E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 Gene3D G3DSA:3.40.50.300 265 488 2.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 Gene3D G3DSA:3.40.50.300 2 225 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 SUPERFAMILY SSF52540 4 223 3.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 SMART SM00382 30 218 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 SMART SM00382 282 476 1.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 PANTHER PTHR24220:SF416 7 382 5.4E-147 T 22-04-2016 APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 SUPERFAMILY SSF52540 259 488 2.15E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 Pfam PF00005 ABC transporter 274 427 3.4E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 Pfam PF00005 ABC transporter 21 170 8.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS18720 41a999a34ef89471426145259353c6c5 499 PANTHER PTHR24220 7 382 5.4E-147 T 22-04-2016 APECO1_RS24410 eb3b97ed13530ca6568258f44c46e3b4 131 Gene3D G3DSA:3.30.70.60 1 103 3.8E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APECO1_RS24410 eb3b97ed13530ca6568258f44c46e3b4 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 22-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS24410 eb3b97ed13530ca6568258f44c46e3b4 131 PANTHER PTHR21011:SF1 1 131 2.7E-52 T 22-04-2016 APECO1_RS24410 eb3b97ed13530ca6568258f44c46e3b4 131 SUPERFAMILY SSF54995 1 103 1.02E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS24410 eb3b97ed13530ca6568258f44c46e3b4 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.683 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS24410 eb3b97ed13530ca6568258f44c46e3b4 131 Pfam PF01250 Ribosomal protein S6 3 91 3.2E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS24410 eb3b97ed13530ca6568258f44c46e3b4 131 PANTHER PTHR21011 1 131 2.7E-52 T 22-04-2016 APECO1_RS24410 eb3b97ed13530ca6568258f44c46e3b4 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 3.3E-39 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS05250 cf0b85c88fb937e9d830987021baeade 151 Pfam PF07012 Curlin associated repeat 40 74 9.6E-9 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 APECO1_RS05250 cf0b85c88fb937e9d830987021baeade 151 Pfam PF07012 Curlin associated repeat 86 119 8.7E-10 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 APECO1_RS05250 cf0b85c88fb937e9d830987021baeade 151 Pfam PF07012 Curlin associated repeat 108 141 1.1E-6 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 APECO1_RS21820 66e35fd7226a0d783ff67a6aba85a254 502 Pfam PF02378 Phosphotransferase system, EIIC 18 328 6.0E-74 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS21820 66e35fd7226a0d783ff67a6aba85a254 502 SUPERFAMILY SSF55604 416 488 6.41E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS21820 66e35fd7226a0d783ff67a6aba85a254 502 PANTHER PTHR30009 11 499 3.5E-204 T 22-04-2016 APECO1_RS21820 66e35fd7226a0d783ff67a6aba85a254 502 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 389 474 9.3E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS21820 66e35fd7226a0d783ff67a6aba85a254 502 Gene3D G3DSA:3.30.1360.60 412 488 2.8E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS21820 66e35fd7226a0d783ff67a6aba85a254 502 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 427 444 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS21820 66e35fd7226a0d783ff67a6aba85a254 502 PANTHER PTHR30009:SF2 11 499 3.5E-204 T 22-04-2016 APECO1_RS21820 66e35fd7226a0d783ff67a6aba85a254 502 Pfam PF00367 phosphotransferase system, EIIB 417 449 3.4E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS21820 66e35fd7226a0d783ff67a6aba85a254 502 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 11 489 3.8E-182 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS01220 2633fc67ebbb02f31b23b3323cd590ae 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 8.8E-63 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS01220 2633fc67ebbb02f31b23b3323cd590ae 172 Pfam PF05638 Type VI secretion system effector, Hcp 8 155 1.3E-32 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS01220 2633fc67ebbb02f31b23b3323cd590ae 172 SUPERFAMILY SSF141452 3 168 4.84E-39 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS01220 2633fc67ebbb02f31b23b3323cd590ae 172 PANTHER PTHR34319 1 172 1.1E-64 T 22-04-2016 APECO1_RS01220 2633fc67ebbb02f31b23b3323cd590ae 172 Gene3D G3DSA:2.30.110.20 1 166 3.5E-32 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS12900 d6474761a2d8f2787d17c08775c8d77c 406 SUPERFAMILY SSF53901 1 253 5.76E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12900 d6474761a2d8f2787d17c08775c8d77c 406 SMART SM00825 Beta-ketoacyl synthase 4 406 7.9E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APECO1_RS12900 d6474761a2d8f2787d17c08775c8d77c 406 SUPERFAMILY SSF53901 215 403 1.52E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12900 d6474761a2d8f2787d17c08775c8d77c 406 Gene3D G3DSA:3.40.47.10 263 404 4.1E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12900 d6474761a2d8f2787d17c08775c8d77c 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 246 1.3E-39 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APECO1_RS12900 d6474761a2d8f2787d17c08775c8d77c 406 PANTHER PTHR11712 1 403 1.0E-169 T 22-04-2016 APECO1_RS12900 d6474761a2d8f2787d17c08775c8d77c 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 9.6E-30 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APECO1_RS12900 d6474761a2d8f2787d17c08775c8d77c 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site APECO1_RS12900 d6474761a2d8f2787d17c08775c8d77c 406 Gene3D G3DSA:3.40.47.10 6 259 1.2E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 PANTHER PTHR26402 2 194 2.4E-158 T 22-04-2016 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 SMART SM00448 2 112 1.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 Pfam PF00072 Response regulator receiver domain 4 112 1.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 SUPERFAMILY SSF52172 1 125 7.68E-27 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 SMART SM00421 135 192 1.7E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 PANTHER PTHR26402:SF500 2 194 2.4E-158 T 22-04-2016 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 SUPERFAMILY SSF46894 130 193 4.42E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 190 2.4E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 Gene3D G3DSA:1.10.10.10 142 192 1.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21000 b519360e12f2f7aafeddd0a7ccb0117a 196 Gene3D G3DSA:3.40.50.2300 1 141 5.9E-31 T 22-04-2016 APECO1_RS06720 c46c6e088fb8d6372beaeb8eb0faa9d3 333 Gene3D G3DSA:3.40.630.30 266 327 6.7E-4 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 3.7E-80 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Gene3D G3DSA:3.30.70.1350 207 288 3.2E-32 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 2.0E-26 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 PANTHER PTHR11562 1 296 3.8E-126 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 SUPERFAMILY SSF161111 8 207 2.62E-51 T 22-04-2016 APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Gene3D G3DSA:1.20.1510.10 11 206 6.3E-45 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 PANTHER PTHR11562:SF55 1 296 3.8E-126 T 22-04-2016 APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 67.202 T 22-04-2016 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 SUPERFAMILY SSF160240 209 288 8.37E-26 T 22-04-2016 APECO1_RS22335 58c994fb414b59b8bf6bb1f8dcb64fe7 300 Pfam PF01545 Cation efflux family 14 206 4.6E-44 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.50.150 828 937 2.1E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.50.150 1045 1059 2.1E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1110.10 346 444 1.3E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1110.10 153 230 1.3E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.270.10 1060 1242 5.2E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.270.10 793 820 5.2E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.40.50.100 715 792 3.5E-31 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:2.30.150.10 592 656 6.9E-32 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 2.3E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 5.2E-15 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.1E-147 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.1E-147 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.1E-147 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856 5 231 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856 1034 1128 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856 340 725 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856 1182 1342 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 PANTHER PTHR20856 743 930 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 1.2E-160 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.2E-58 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.373 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 5.3E-28 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 SUPERFAMILY SSF64484 343 939 0.0 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 SUPERFAMILY SSF64484 11 226 0.0 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 22-04-2016 APECO1_RS22745 5a6db54270d33f1e4bfa723559a235e2 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 PANTHER PTHR11993 124 544 0.0 T 22-04-2016 APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 2.4E-13 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 SUPERFAMILY SSF143243 9 194 1.83E-47 T 22-04-2016 APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 PANTHER PTHR11993:SF30 124 544 0.0 T 22-04-2016 APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 SUPERFAMILY SSF56762 193 537 4.45E-109 T 22-04-2016 IPR029014 NiFe hydrogenase-like APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 Gene3D G3DSA:1.10.645.10 166 536 5.3E-88 T 22-04-2016 IPR029014 NiFe hydrogenase-like APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 141 6.0E-25 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 3.9E-25 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 466 537 5.0E-11 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 APECO1_RS15485 69b405b4c53f7731c9eea24de52881a1 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 296 464 1.2E-34 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 PANTHER PTHR13794:SF60 4 321 1.5E-148 T 22-04-2016 APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 1 112 5.2E-32 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 Pfam PF13378 Enolase C-terminal domain-like 133 318 6.1E-26 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 SUPERFAMILY SSF51604 116 310 1.03E-51 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 PANTHER PTHR13794 4 321 1.5E-148 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 87 112 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 SMART SM00922 130 223 2.7E-18 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 Gene3D G3DSA:3.20.20.120 117 319 7.4E-62 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 SUPERFAMILY SSF54826 3 112 7.07E-33 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS07330 b3b77d2fb34afcfb671d306233f7c80c 321 Gene3D G3DSA:3.30.390.10 1 103 3.2E-47 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 SUPERFAMILY SSF52540 4 229 2.82E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 PANTHER PTHR24220:SF538 6 378 3.2E-172 T 22-04-2016 APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 SUPERFAMILY SSF52540 257 478 2.66E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 PANTHER PTHR24220 6 378 3.2E-172 T 22-04-2016 APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 Pfam PF00005 ABC transporter 271 424 2.8E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 Pfam PF00005 ABC transporter 20 169 7.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 SMART SM00382 278 475 0.63 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 SMART SM00382 29 217 1.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 Gene3D G3DSA:3.40.50.300 256 480 1.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01745 ce65dbd3d7baaebc3801fda314b2007c 494 Gene3D G3DSA:3.40.50.300 2 232 5.9E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 PANTHER PTHR21262 3 702 0.0 T 22-04-2016 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 Pfam PF13291 ACT domain 622 699 4.3E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 Pfam PF13328 HD domain 26 175 2.9E-53 T 22-04-2016 IPR003607 HD/PDEase domain APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 Gene3D G3DSA:3.10.20.30 387 448 4.1E-23 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 Gene3D G3DSA:3.30.460.10 178 324 5.7E-48 T 22-04-2016 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 SUPERFAMILY SSF81271 375 447 3.71E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 699 1.3E-294 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 Gene3D G3DSA:3.30.70.260 627 697 1.3E-6 T 22-04-2016 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 SUPERFAMILY SSF109604 3 190 2.32E-75 T 22-04-2016 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 SUPERFAMILY SSF81301 180 392 1.52E-62 T 22-04-2016 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 SMART SM00954 235 345 2.8E-63 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 SUPERFAMILY SSF55021 627 699 1.51E-5 T 22-04-2016 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 Pfam PF02824 TGS domain 388 447 1.7E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.4E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 PANTHER PTHR21262:SF0 3 702 0.0 T 22-04-2016 APECO1_RS20845 4de788f66cad1cb30a7f3c38fba5e94b 702 SMART SM00471 41 153 1.2E-11 T 22-04-2016 IPR003607 HD/PDEase domain APECO1_RS02320 f650602288af1552a8df47f986d36466 516 Gene3D G3DSA:3.20.20.450 273 514 1.0E-80 T 22-04-2016 IPR001633 EAL domain APECO1_RS02320 f650602288af1552a8df47f986d36466 516 SMART SM00052 267 507 3.3E-112 T 22-04-2016 IPR001633 EAL domain APECO1_RS02320 f650602288af1552a8df47f986d36466 516 Pfam PF12792 CSS motif domain associated with EAL 39 242 2.4E-44 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APECO1_RS02320 f650602288af1552a8df47f986d36466 516 PANTHER PTHR33121:SF4 1 514 0.0 T 22-04-2016 APECO1_RS02320 f650602288af1552a8df47f986d36466 516 Pfam PF00563 EAL domain 274 501 9.5E-66 T 22-04-2016 IPR001633 EAL domain APECO1_RS02320 f650602288af1552a8df47f986d36466 516 SUPERFAMILY SSF141868 273 514 5.49E-75 T 22-04-2016 IPR001633 EAL domain APECO1_RS02320 f650602288af1552a8df47f986d36466 516 PANTHER PTHR33121 1 514 0.0 T 22-04-2016 APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 PANTHER PTHR10584 17 293 3.2E-220 T 22-04-2016 APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 PANTHER PTHR10584 332 376 3.2E-220 T 22-04-2016 APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 PANTHER PTHR10584 393 434 3.2E-220 T 22-04-2016 APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 SUPERFAMILY SSF53613 36 305 3.12E-45 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 SUPERFAMILY SSF53613 338 416 3.12E-45 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 PANTHER PTHR10584:SF202 17 293 3.2E-220 T 22-04-2016 APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 PANTHER PTHR10584:SF202 332 376 3.2E-220 T 22-04-2016 APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 PANTHER PTHR10584:SF202 393 434 3.2E-220 T 22-04-2016 APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Gene3D G3DSA:3.30.1110.10 45 94 8.2E-8 T 22-04-2016 APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Gene3D G3DSA:3.40.1190.20 95 298 2.2E-48 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Gene3D G3DSA:3.40.1190.20 337 433 2.2E-48 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS02425 f8f4894b2ba9ef23ee23d36a37b7e00f 434 Pfam PF00294 pfkB family carbohydrate kinase 79 293 5.5E-9 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 PANTHER PTHR13822 1 139 3.4E-50 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 Gene3D G3DSA:2.60.15.10 3 91 2.8E-30 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.4E-30 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.752 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 SUPERFAMILY SSF51344 3 86 2.09E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 SUPERFAMILY SSF46604 88 137 1.36E-15 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 1.1E-13 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 4.0E-41 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 Gene3D G3DSA:1.20.5.440 92 134 2.8E-25 T 22-04-2016 APECO1_RS21295 9697dece7ffc23f6ca461bc452f22532 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 1.1E-48 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 SUPERFAMILY SSF118215 29 443 3.14E-98 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 PANTHER PTHR11958 23 459 1.0E-275 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 3.8E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 3.8E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 3.8E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 3.8E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 3.8E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 3.8E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 Gene3D G3DSA:1.10.3860.10 23 449 7.3E-103 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 443 4.7E-104 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS09275 92fa2c5bb2d3ecda6e92945f6696cfff 463 PANTHER PTHR11958:SF5 23 459 1.0E-275 T 22-04-2016 APECO1_RS18490 af754e5d555537421435521e8f28951b 242 Pfam PF00912 Transglycosylase 60 227 5.4E-52 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APECO1_RS18490 af754e5d555537421435521e8f28951b 242 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 12 231 2.4E-87 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 APECO1_RS18490 af754e5d555537421435521e8f28951b 242 Gene3D G3DSA:1.10.3810.10 62 231 1.3E-61 T 22-04-2016 APECO1_RS18490 af754e5d555537421435521e8f28951b 242 PANTHER PTHR30400 1 242 4.7E-122 T 22-04-2016 APECO1_RS18490 af754e5d555537421435521e8f28951b 242 PANTHER PTHR30400:SF0 1 242 4.7E-122 T 22-04-2016 APECO1_RS18490 af754e5d555537421435521e8f28951b 242 SUPERFAMILY SSF53955 51 231 1.12E-62 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS18490 af754e5d555537421435521e8f28951b 242 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 8 233 44.075 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 APECO1_RS17645 ef0dad65ad91b11ac442e559dda68e16 193 Gene3D G3DSA:3.40.50.1820 3 185 2.0E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS17645 ef0dad65ad91b11ac442e559dda68e16 193 PANTHER PTHR35602:SF3 1 193 8.6E-130 T 22-04-2016 APECO1_RS17645 ef0dad65ad91b11ac442e559dda68e16 193 PANTHER PTHR35602 1 193 8.6E-130 T 22-04-2016 APECO1_RS17645 ef0dad65ad91b11ac442e559dda68e16 193 SUPERFAMILY SSF53474 3 188 2.66E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS17645 ef0dad65ad91b11ac442e559dda68e16 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 1.9E-74 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA APECO1_RS03895 71a004242fcd228f7df5e22728baad96 88 PANTHER PTHR38777:SF1 2 88 3.0E-35 T 22-04-2016 APECO1_RS03895 71a004242fcd228f7df5e22728baad96 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 67 1.7E-12 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APECO1_RS03895 71a004242fcd228f7df5e22728baad96 88 PANTHER PTHR38777 2 88 3.0E-35 T 22-04-2016 APECO1_RS03895 71a004242fcd228f7df5e22728baad96 88 SUPERFAMILY SSF57716 39 72 2.71E-8 T 22-04-2016 APECO1_RS03895 71a004242fcd228f7df5e22728baad96 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 9 67 9.4E-18 T 22-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type APECO1_RS03895 71a004242fcd228f7df5e22728baad96 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 1.5E-6 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APECO1_RS03895 71a004242fcd228f7df5e22728baad96 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 1.5E-6 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APECO1_RS03895 71a004242fcd228f7df5e22728baad96 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APECO1_RS02340 59f4d82cd10395502e6959ccb0935bc9 124 Pfam PF10757 Biofilm formation regulator YbaJ 1 117 5.5E-62 T 22-04-2016 IPR019693 Biofilm formation regulator YbaJ APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 2.0E-56 T 22-04-2016 APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PANTHER PTHR24322:SF402 15 142 7.3E-62 T 22-04-2016 APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PANTHER PTHR24322:SF402 158 190 7.3E-62 T 22-04-2016 APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 Gene3D G3DSA:3.40.50.720 6 252 4.3E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 SUPERFAMILY SSF51735 9 252 8.57E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PANTHER PTHR24322 15 142 7.3E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 PANTHER PTHR24322 158 190 7.3E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS16255 063e46f12a56c2cb6f355adeb1da251b 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 4.2E-138 T 22-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 APECO1_RS05500 a43d675356cb5909340604f7ba299715 346 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 335 5.4E-146 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APECO1_RS05500 a43d675356cb5909340604f7ba299715 346 PANTHER PTHR30100 1 336 1.4E-143 T 22-04-2016 APECO1_RS05500 a43d675356cb5909340604f7ba299715 346 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 335 142.78 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APECO1_RS05500 a43d675356cb5909340604f7ba299715 346 Gene3D G3DSA:3.40.718.10 1 329 3.1E-132 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS05500 a43d675356cb5909340604f7ba299715 346 PIRSF PIRSF002465 1 333 3.3E-124 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APECO1_RS05500 a43d675356cb5909340604f7ba299715 346 SUPERFAMILY SSF53659 1 330 6.58E-101 T 22-04-2016 APECO1_RS05500 a43d675356cb5909340604f7ba299715 346 PANTHER PTHR30100:SF1 1 336 1.4E-143 T 22-04-2016 APECO1_RS05500 a43d675356cb5909340604f7ba299715 346 Pfam PF02504 Fatty acid synthesis protein 1 321 9.0E-127 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 Gene3D G3DSA:3.40.190.10 188 281 3.2E-18 T 22-04-2016 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 Gene3D G3DSA:3.40.190.10 105 187 3.2E-21 T 22-04-2016 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 Gene3D G3DSA:3.40.190.10 287 314 3.2E-21 T 22-04-2016 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 Gene3D G3DSA:1.10.10.10 16 100 5.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 Pfam PF03466 LysR substrate binding domain 137 309 1.8E-16 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 1.6E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 PANTHER PTHR30118 13 314 8.3E-173 T 22-04-2016 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 SUPERFAMILY SSF53850 105 311 7.6E-40 T 22-04-2016 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 8.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 8.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 SUPERFAMILY SSF46785 19 98 1.09E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS00420 1b8c3dd560a6d54a5a7c0cde8273707a 314 PANTHER PTHR30118:SF6 13 314 8.3E-173 T 22-04-2016 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 SUPERFAMILY SSF47413 1 59 1.29E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.4E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 Gene3D G3DSA:3.40.50.2300 61 170 1.4E-33 T 22-04-2016 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 PANTHER PTHR30146:SF30 1 340 4.7E-163 T 22-04-2016 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 SUPERFAMILY SSF53822 60 340 1.63E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 SMART SM00354 1 71 3.0E-37 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 PANTHER PTHR30146 1 340 4.7E-163 T 22-04-2016 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 Gene3D G3DSA:1.10.260.40 2 60 7.9E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 58.92 T 22-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 Gene3D G3DSA:3.40.50.2300 171 332 1.3E-62 T 22-04-2016 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS08900 5410ca8465ece169f49b2fd3f311aab4 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 6.7E-41 T 22-04-2016 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 Pfam PF13377 Periplasmic binding protein-like domain 169 329 4.8E-33 T 22-04-2016 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 Gene3D G3DSA:3.40.50.2300 58 166 2.8E-48 T 22-04-2016 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 SUPERFAMILY SSF47413 1 59 4.74E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 PANTHER PTHR30146 1 346 2.1E-210 T 22-04-2016 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 Gene3D G3DSA:3.40.50.2300 167 330 3.6E-48 T 22-04-2016 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 SMART SM00354 1 71 5.4E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 SUPERFAMILY SSF53822 61 331 5.62E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 PANTHER PTHR30146:SF55 1 346 2.1E-210 T 22-04-2016 APECO1_RS12025 78bc6b146bb21e2cb7dc5fbea6326df3 346 Gene3D G3DSA:1.10.260.40 2 57 1.6E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS10305 3ee66204766ce5067aac3c93ef2e04c6 77 PANTHER PTHR33279 1 77 4.3E-27 T 22-04-2016 APECO1_RS10305 3ee66204766ce5067aac3c93ef2e04c6 77 SUPERFAMILY SSF64307 2 77 2.75E-24 T 22-04-2016 IPR001455 TusA-like domain APECO1_RS10305 3ee66204766ce5067aac3c93ef2e04c6 77 Gene3D G3DSA:3.30.110.40 6 77 2.2E-33 T 22-04-2016 IPR001455 TusA-like domain APECO1_RS10305 3ee66204766ce5067aac3c93ef2e04c6 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 22-04-2016 IPR001455 TusA-like domain APECO1_RS10305 3ee66204766ce5067aac3c93ef2e04c6 77 Pfam PF01206 Sulfurtransferase TusA 9 77 1.2E-19 T 22-04-2016 IPR001455 TusA-like domain APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 SMART SM00959 5 47 6.9E-18 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 PANTHER PTHR15184:SF34 160 416 1.9E-199 T 22-04-2016 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 PANTHER PTHR15184:SF34 19 141 1.9E-199 T 22-04-2016 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.2E-223 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:3.40.50.300 132 418 2.7E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 SMART SM00357 52 118 9.6E-19 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.3E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 SMART SM00382 170 355 5.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.259 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF52540 90 371 1.49E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 PANTHER PTHR15184 160 416 1.9E-199 T 22-04-2016 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 PANTHER PTHR15184 19 141 1.9E-199 T 22-04-2016 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.3E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.6E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:1.10.720.10 1 47 1.4E-22 T 22-04-2016 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF68912 1 46 2.0E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 Gene3D G3DSA:2.40.50.140 49 117 6.5E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS21535 e130092e41361244e8362f098cdd0a85 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 PANTHER PTHR11624 1 303 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 PANTHER PTHR11624 333 665 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 PANTHER PTHR11624:SF85 1 303 0.0 T 22-04-2016 APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 PANTHER PTHR11624:SF85 333 665 0.0 T 22-04-2016 APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 SUPERFAMILY SSF52518 4 320 1.98E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 Gene3D G3DSA:3.40.50.970 4 320 1.6E-132 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 1.0E-172 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 SUPERFAMILY SSF52922 532 663 1.57E-43 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 Gene3D G3DSA:3.40.50.970 326 532 1.2E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 Gene3D G3DSA:3.40.50.920 537 662 2.8E-49 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 SMART SM00861 354 524 2.5E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 SUPERFAMILY SSF52518 332 525 4.26E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 2.4E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS13790 85cd6b32356b9f5fa42d75a1a5306fd4 667 Pfam PF02780 Transketolase, C-terminal domain 539 654 1.8E-20 T 22-04-2016 IPR033248 Transketolase, C-terminal domain APECO1_RS23875 ff37f41ed3b2be2fd6bba23e8b598053 89 SUPERFAMILY SSF159133 1 88 3.92E-28 T 22-04-2016 IPR023414 Ethanolamine utilization protein-like domain APECO1_RS23875 ff37f41ed3b2be2fd6bba23e8b598053 89 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 83 1.0E-35 T 22-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml APECO1_RS23875 ff37f41ed3b2be2fd6bba23e8b598053 89 PANTHER PTHR36539 1 86 2.1E-31 T 22-04-2016 APECO1_RS23875 ff37f41ed3b2be2fd6bba23e8b598053 89 PANTHER PTHR36539:SF1 1 86 2.1E-31 T 22-04-2016 APECO1_RS23875 ff37f41ed3b2be2fd6bba23e8b598053 89 Gene3D G3DSA:2.40.50.220 1 88 2.5E-32 T 22-04-2016 IPR023414 Ethanolamine utilization protein-like domain APECO1_RS23875 ff37f41ed3b2be2fd6bba23e8b598053 89 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 1.6E-30 T 22-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Gene3D G3DSA:3.40.50.740 96 178 1.3E-78 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Gene3D G3DSA:3.40.50.740 399 575 1.3E-78 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Gene3D G3DSA:3.40.50.740 621 665 1.3E-78 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Gene3D G3DSA:3.40.228.10 325 398 1.5E-57 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Gene3D G3DSA:3.40.228.10 179 291 1.5E-57 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 40 92 3.2E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Gene3D G3DSA:2.40.40.20 666 828 3.3E-46 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 PANTHER PTHR11615:SF123 39 284 0.0 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 PANTHER PTHR11615:SF123 643 828 0.0 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 PANTHER PTHR11615:SF123 345 596 0.0 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.8E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 PANTHER PTHR11615 39 284 0.0 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 PANTHER PTHR11615 643 828 0.0 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 PANTHER PTHR11615 345 596 0.0 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 SMART SM00926 39 93 4.0E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 SUPERFAMILY SSF50692 688 828 1.06E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Gene3D G3DSA:2.20.25.90 37 95 2.7E-20 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Hamap MF_01630 Nitrate reductase [napA]. 1 828 30.869 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 SUPERFAMILY SSF53706 37 700 7.2E-205 T 22-04-2016 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 Pfam PF00384 Molybdopterin oxidoreductase 96 567 4.2E-92 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 1.3E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APECO1_RS12315 26d2239e14f2c8bc240e07ac4da576f5 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 SUPERFAMILY SSF52540 352 497 3.43E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 SUPERFAMILY SSF52540 145 209 3.43E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 Pfam PF12137 RNA polymerase recycling family C-terminal 477 499 1.4E-6 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 SUPERFAMILY SSF52540 22 241 9.91E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 SMART SM00490 389 473 1.7E-19 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 PANTHER PTHR10799:SF610 13 226 9.8E-256 T 22-04-2016 APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 PANTHER PTHR10799 271 499 9.8E-256 T 22-04-2016 APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 PANTHER PTHR10799 13 226 9.8E-256 T 22-04-2016 APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 Pfam PF00176 SNF2 family N-terminal domain 46 313 2.0E-19 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 SMART SM00487 22 214 1.6E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 Pfam PF00271 Helicase conserved C-terminal domain 365 473 1.4E-16 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 PANTHER PTHR10799:SF610 271 499 9.8E-256 T 22-04-2016 APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 Gene3D G3DSA:3.40.50.300 26 192 1.5E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS26945 8e5260c30aa7c0bc40600f9d55d763ac 499 Gene3D G3DSA:3.40.50.300 355 491 2.5E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04625 4f77b69d5001ba9fc7590c12d8fa535f 760 Pfam PF01228 Glycine radical 630 741 4.3E-43 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APECO1_RS04625 4f77b69d5001ba9fc7590c12d8fa535f 760 Gene3D G3DSA:3.20.70.20 5 760 0.0 T 22-04-2016 APECO1_RS04625 4f77b69d5001ba9fc7590c12d8fa535f 760 PANTHER PTHR30191 9 760 0.0 T 22-04-2016 APECO1_RS04625 4f77b69d5001ba9fc7590c12d8fa535f 760 SUPERFAMILY SSF51998 4 759 5.49E-296 T 22-04-2016 APECO1_RS04625 4f77b69d5001ba9fc7590c12d8fa535f 760 PANTHER PTHR30191:SF7 9 760 0.0 T 22-04-2016 APECO1_RS04625 4f77b69d5001ba9fc7590c12d8fa535f 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APECO1_RS04625 4f77b69d5001ba9fc7590c12d8fa535f 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 3.7E-208 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APECO1_RS04625 4f77b69d5001ba9fc7590c12d8fa535f 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APECO1_RS04625 4f77b69d5001ba9fc7590c12d8fa535f 760 PIRSF PIRSF000379 8 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 196 0.0085 T 22-04-2016 APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PANTHER PTHR24322 161 192 1.8E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PANTHER PTHR24322 14 145 1.8E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 SUPERFAMILY SSF51735 8 266 3.95E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 3.8E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.8E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.8E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.8E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.8E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.8E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 Gene3D G3DSA:3.40.50.720 9 266 6.6E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 Pfam PF00106 short chain dehydrogenase 10 205 5.5E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS22955 bef95dc616dfed71dbd1f3790e9cf2b1 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 11 484 1.9E-252 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 Hamap MF_01932 AMP nucleosidase [amn]. 3 484 61.083 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 167 3.9E-53 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 Gene3D G3DSA:3.30.1730.10 2 171 6.2E-68 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 Gene3D G3DSA:3.40.50.1580 174 466 1.4E-117 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 Pfam PF01048 Phosphorylase superfamily 267 431 1.6E-18 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 PANTHER PTHR21234 180 226 1.1E-134 T 22-04-2016 IPR018017 Nucleoside phosphorylase APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 PANTHER PTHR21234 249 484 1.1E-134 T 22-04-2016 IPR018017 Nucleoside phosphorylase APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 PANTHER PTHR21234:SF11 180 226 1.1E-134 T 22-04-2016 APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 PANTHER PTHR21234:SF11 249 484 1.1E-134 T 22-04-2016 APECO1_RS10905 529800ad5a20419d8175e4c4a9f32c40 484 SUPERFAMILY SSF53167 9 484 1.09E-160 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS18055 4efd3eeac2efe48413bcef7622d19a65 764 SUPERFAMILY SSF51998 8 762 6.87E-285 T 22-04-2016 APECO1_RS18055 4efd3eeac2efe48413bcef7622d19a65 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APECO1_RS18055 4efd3eeac2efe48413bcef7622d19a65 764 PANTHER PTHR30191 1 764 0.0 T 22-04-2016 APECO1_RS18055 4efd3eeac2efe48413bcef7622d19a65 764 Pfam PF01228 Glycine radical 634 745 4.1E-42 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APECO1_RS18055 4efd3eeac2efe48413bcef7622d19a65 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 5.0E-195 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APECO1_RS18055 4efd3eeac2efe48413bcef7622d19a65 764 PANTHER PTHR30191:SF7 1 764 0.0 T 22-04-2016 APECO1_RS18055 4efd3eeac2efe48413bcef7622d19a65 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APECO1_RS18055 4efd3eeac2efe48413bcef7622d19a65 764 Gene3D G3DSA:3.20.70.20 9 762 0.0 T 22-04-2016 APECO1_RS18055 4efd3eeac2efe48413bcef7622d19a65 764 PIRSF PIRSF000379 12 764 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 SUPERFAMILY SSF51735 123 281 5.14E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 Gene3D G3DSA:3.40.192.10 7 139 9.2E-52 T 22-04-2016 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 SUPERFAMILY SSF53223 3 122 7.96E-41 T 22-04-2016 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 PANTHER PTHR10025 1 286 2.3E-181 T 22-04-2016 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 6.6E-40 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.854 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 9.2E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 9.2E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 9.2E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 9.2E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 9.2E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 9.2E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 9.2E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 Gene3D G3DSA:3.40.50.720 140 264 6.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02690 d113be618dc62cbbc069c0b0fa57c93b 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 279 1.1E-68 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 Gene3D G3DSA:1.25.40.10 276 369 2.8E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 Pfam PF14559 Tetratricopeptide repeat 615 684 9.5E-7 T 22-04-2016 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SUPERFAMILY SSF48452 466 545 3.28E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SUPERFAMILY SSF48452 609 660 3.28E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SMART SM00028 461 494 98.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SMART SM00028 303 336 3.0E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SMART SM00028 351 384 34.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SMART SM00028 603 636 260.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SMART SM00028 671 704 480.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SMART SM00028 385 418 0.33 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SMART SM00028 269 302 500.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SUPERFAMILY SSF48452 70 212 2.15E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SUPERFAMILY SSF48452 267 338 2.15E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SUPERFAMILY SSF48452 272 432 1.93E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 PANTHER PTHR23083 146 219 8.2E-32 T 22-04-2016 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 PANTHER PTHR23083 600 738 8.2E-32 T 22-04-2016 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 PANTHER PTHR23083 274 559 8.2E-32 T 22-04-2016 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 PANTHER PTHR23083 15 23 8.2E-32 T 22-04-2016 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 Pfam PF13432 Tetratricopeptide repeat 389 442 2.9E-5 T 22-04-2016 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 Pfam PF13432 Tetratricopeptide repeat 274 336 3.9E-6 T 22-04-2016 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 Gene3D G3DSA:1.25.40.10 370 552 1.5E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 Gene3D G3DSA:1.25.40.10 595 738 1.1E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 Gene3D G3DSA:1.25.40.10 57 262 7.7E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 SUPERFAMILY SSF48452 579 737 3.8E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS20230 c2d4e86a7ca614cbade91aebc8589c9b 1157 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 802 1136 3.4E-118 T 22-04-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 Gene3D G3DSA:1.10.287.730 148 172 5.9E-18 T 22-04-2016 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 SUPERFAMILY SSF53335 142 429 2.26E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 Gene3D G3DSA:3.40.50.150 233 429 5.9E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 6.4E-196 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 Gene3D G3DSA:3.30.70.1170 173 230 8.9E-29 T 22-04-2016 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.7E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.7E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.7E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.7E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 2.7E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 PANTHER PTHR22807:SF30 37 429 2.0E-143 T 22-04-2016 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 Gene3D G3DSA:1.10.940.10 2 147 4.1E-49 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 239 426 6.1E-80 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 SUPERFAMILY SSF48013 5 149 2.62E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 PANTHER PTHR22807 37 429 2.0E-143 T 22-04-2016 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 Pfam PF01029 NusB family 6 127 4.3E-26 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APECO1_RS18910 c6391fb4dc555ae8396e7fc56eb8d4a4 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 74.629 T 22-04-2016 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS21780 ac224392766194c7404df0716e313ec4 299 PANTHER PTHR22911:SF27 3 294 4.6E-95 T 22-04-2016 APECO1_RS21780 ac224392766194c7404df0716e313ec4 299 SUPERFAMILY SSF103481 199 278 1.19E-9 T 22-04-2016 APECO1_RS21780 ac224392766194c7404df0716e313ec4 299 PANTHER PTHR22911 3 294 4.6E-95 T 22-04-2016 APECO1_RS21780 ac224392766194c7404df0716e313ec4 299 Pfam PF00892 EamA-like transporter family 139 274 7.7E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS21780 ac224392766194c7404df0716e313ec4 299 Pfam PF00892 EamA-like transporter family 2 128 9.0E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS21780 ac224392766194c7404df0716e313ec4 299 SUPERFAMILY SSF103481 35 130 4.71E-6 T 22-04-2016 APECO1_RS21780 ac224392766194c7404df0716e313ec4 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 3.7E-93 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 APECO1_RS10260 e35e40b8c759bc713cb0488ab727c57a 183 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 167 1.4E-91 T 22-04-2016 IPR022523 Flagellar regulator, FliZ APECO1_RS10260 e35e40b8c759bc713cb0488ab727c57a 183 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 164 2.5E-13 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 Pfam PF08402 TOBE domain 295 375 3.1E-19 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 4.9E-155 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 PANTHER PTHR24220 21 342 7.4E-204 T 22-04-2016 APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 Pfam PF00005 ABC transporter 36 177 8.7E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 PANTHER PTHR24220:SF481 21 342 7.4E-204 T 22-04-2016 APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 SUPERFAMILY SSF50331 252 375 6.46E-17 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 SMART SM00382 44 227 3.6E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 SUPERFAMILY SSF52540 19 257 2.73E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 Gene3D G3DSA:3.40.50.300 11 254 7.9E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04160 41503093d1ec64b9a75bc715250c7308 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 PANTHER PTHR30363 1 252 6.8E-219 T 22-04-2016 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 SMART SM01134 74 234 4.3E-58 T 22-04-2016 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 Gene3D G3DSA:3.40.50.1360 78 215 1.8E-11 T 22-04-2016 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.8E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.8E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 SMART SM00420 6 58 1.9E-25 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 PANTHER PTHR30363:SF22 1 252 6.8E-219 T 22-04-2016 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 2.6E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 SUPERFAMILY SSF46785 4 71 1.78E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 Gene3D G3DSA:1.10.10.10 4 59 6.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 Pfam PF00455 DeoR C terminal sensor domain 77 233 1.6E-48 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS09485 e3c8c761621f1579d3966119cd3a113e 252 SUPERFAMILY SSF100950 76 234 1.26E-30 T 22-04-2016 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 Gene3D G3DSA:1.10.287.130 260 305 2.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 SUPERFAMILY SSF47384 241 320 1.53E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 SUPERFAMILY SSF103190 76 177 1.96E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 SMART SM00388 255 320 2.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 SMART SM00304 204 255 7.2E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 Gene3D G3DSA:3.30.565.10 306 471 2.9E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 SUPERFAMILY SSF55874 311 469 4.58E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 Pfam PF00672 HAMP domain 185 251 2.3E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 7.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 7.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 7.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 464 9.1E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 PANTHER PTHR24423 95 143 2.8E-66 T 22-04-2016 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 PANTHER PTHR24423 198 469 2.8E-66 T 22-04-2016 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 319 1.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS25650 4e8750fc3988581b6b715663b252ec0f 474 SMART SM00387 363 473 5.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 Gene3D G3DSA:1.10.1060.10 333 449 2.7E-18 T 22-04-2016 APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 Pfam PF10531 SLBB domain 296 344 4.0E-10 T 22-04-2016 IPR019554 Soluble ligand binding domain APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 2.4E-47 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 PANTHER PTHR11780:SF1 13 482 3.9E-264 T 22-04-2016 APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 2.1E-33 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 SUPERFAMILY SSF46548 336 444 5.58E-20 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 708 267.938 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 PANTHER PTHR11780 13 482 3.9E-264 T 22-04-2016 APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 SUPERFAMILY SSF142019 94 303 4.05E-61 T 22-04-2016 APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 Pfam PF12838 4Fe-4S dicluster domain 376 430 1.0E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS08745 e98d06268445f43546870f50b26f59c0 708 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 2.8E-179 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 SMART SM00937 13 123 6.3E-60 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 SUPERFAMILY SSF75620 1 292 3.66E-138 T 22-04-2016 APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 291 3.5E-158 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 Pfam PF00472 RF-1 domain 157 265 1.9E-39 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 PANTHER PTHR11075:SF6 1 290 4.0E-151 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 PANTHER PTHR11075 1 290 4.0E-151 T 22-04-2016 APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 Pfam PF03462 PCRF domain 3 147 1.1E-49 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 Gene3D G3DSA:3.30.160.20 155 234 2.8E-37 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APECO1_RS16415 ca1f9e8220ec4989bf599a34ccc00ff5 293 Gene3D G3DSA:1.20.58.410 1 44 6.5E-9 T 22-04-2016 APECO1_RS24735 cf63b714ec134206ed96ed6cacd50b88 360 PANTHER PTHR33529 1 360 1.7E-178 T 22-04-2016 APECO1_RS24735 cf63b714ec134206ed96ed6cacd50b88 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 358 5.8E-72 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APECO1_RS24735 cf63b714ec134206ed96ed6cacd50b88 360 PANTHER PTHR33529:SF1 1 360 1.7E-178 T 22-04-2016 APECO1_RS24735 cf63b714ec134206ed96ed6cacd50b88 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 358 1.8E-137 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 APECO1_RS25540 730e469bb07f8c80825ef75f938e5a68 516 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 504 9.0E-238 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted APECO1_RS25540 730e469bb07f8c80825ef75f938e5a68 516 Pfam PF11230 Protein of unknown function (DUF3029) 22 504 1.7E-225 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted APECO1_RS25540 730e469bb07f8c80825ef75f938e5a68 516 Gene3D G3DSA:3.20.70.20 84 253 2.4E-10 T 22-04-2016 APECO1_RS25540 730e469bb07f8c80825ef75f938e5a68 516 SUPERFAMILY SSF51998 24 470 4.27E-91 T 22-04-2016 APECO1_RS25540 730e469bb07f8c80825ef75f938e5a68 516 PIRSF PIRSF028991 6 516 1.0E-283 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted APECO1_RS15710 cbfea1a111e94d34b3a9f82f3de49f21 259 SMART SM00893 30 219 0.0018 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS15710 cbfea1a111e94d34b3a9f82f3de49f21 259 Gene3D G3DSA:3.40.50.620 1 250 4.8E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS15710 cbfea1a111e94d34b3a9f82f3de49f21 259 Pfam PF01012 Electron transfer flavoprotein domain 47 214 9.4E-17 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS15710 cbfea1a111e94d34b3a9f82f3de49f21 259 PANTHER PTHR21294 54 257 1.7E-99 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APECO1_RS15710 cbfea1a111e94d34b3a9f82f3de49f21 259 PIRSF PIRSF000090 1 258 6.0E-44 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APECO1_RS15710 cbfea1a111e94d34b3a9f82f3de49f21 259 SUPERFAMILY SSF52402 1 248 4.9E-35 T 22-04-2016 APECO1_RS15710 cbfea1a111e94d34b3a9f82f3de49f21 259 PANTHER PTHR21294:SF7 54 257 1.7E-99 T 22-04-2016 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 244 2.6E-50 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 Gene3D G3DSA:3.40.50.150 11 248 5.3E-106 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 SUPERFAMILY SSF51905 266 546 1.25E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 662 7.5E-156 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 PANTHER PTHR13847:SF182 603 666 1.6E-183 T 22-04-2016 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 Gene3D G3DSA:3.50.50.60 262 344 3.8E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 Gene3D G3DSA:3.50.50.60 571 645 3.8E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 Gene3D G3DSA:3.50.50.60 396 477 3.8E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 657 28.568 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 PANTHER PTHR13847 226 585 1.6E-183 T 22-04-2016 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 PANTHER PTHR13847 603 666 1.6E-183 T 22-04-2016 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 PANTHER PTHR13847:SF182 226 585 1.6E-183 T 22-04-2016 APECO1_RS12905 8d63e669fbdfb81d231c73ba6bf29d67 668 Pfam PF01266 FAD dependent oxidoreductase 267 632 8.6E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APECO1_RS03085 9619fb5669adb8b1a2ab49236511e1c7 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 6.8E-240 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 APECO1_RS03085 9619fb5669adb8b1a2ab49236511e1c7 633 PANTHER PTHR30627:SF2 5 625 6.9E-278 T 22-04-2016 APECO1_RS03085 9619fb5669adb8b1a2ab49236511e1c7 633 SUPERFAMILY SSF56601 254 611 2.47E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS03085 9619fb5669adb8b1a2ab49236511e1c7 633 SUPERFAMILY SSF56519 56 253 1.31E-53 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APECO1_RS03085 9619fb5669adb8b1a2ab49236511e1c7 633 Gene3D G3DSA:3.90.1310.10 130 252 5.9E-41 T 22-04-2016 APECO1_RS03085 9619fb5669adb8b1a2ab49236511e1c7 633 Gene3D G3DSA:3.40.710.10 253 612 4.5E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS03085 9619fb5669adb8b1a2ab49236511e1c7 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 6.6E-46 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APECO1_RS03085 9619fb5669adb8b1a2ab49236511e1c7 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 9.7E-86 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APECO1_RS03085 9619fb5669adb8b1a2ab49236511e1c7 633 PANTHER PTHR30627 5 625 6.9E-278 T 22-04-2016 APECO1_RS11690 1cf5c6a659d3dd0e971ca5933ff92693 337 PANTHER PTHR30349:SF20 100 337 1.3E-36 T 22-04-2016 APECO1_RS11690 1cf5c6a659d3dd0e971ca5933ff92693 337 PANTHER PTHR30349 100 337 1.3E-36 T 22-04-2016 APECO1_RS11690 1cf5c6a659d3dd0e971ca5933ff92693 337 Pfam PF00589 Phage integrase family 164 308 1.2E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS11690 1cf5c6a659d3dd0e971ca5933ff92693 337 Gene3D G3DSA:1.10.443.10 161 316 8.2E-37 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS11690 1cf5c6a659d3dd0e971ca5933ff92693 337 SUPERFAMILY SSF56349 61 315 2.03E-45 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 SUPERFAMILY SSF55190 2 100 1.96E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 Gene3D G3DSA:3.30.1360.70 2 105 5.8E-34 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 Pfam PF00750 tRNA synthetases class I (R) 95 446 2.0E-179 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.1E-20 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 Gene3D G3DSA:3.40.50.620 111 453 2.7E-119 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 29.557 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 9.0E-26 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 9.0E-26 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 9.0E-26 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 9.0E-26 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 Gene3D G3DSA:1.10.730.10 454 577 5.2E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 SUPERFAMILY SSF47323 454 577 3.34E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 Pfam PF05746 DALR anticodon binding domain 460 577 2.6E-35 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 PANTHER PTHR11956:SF1 1 577 3.6E-273 T 22-04-2016 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 SUPERFAMILY SSF52374 109 454 3.44E-99 T 22-04-2016 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 SMART SM00836 460 577 1.4E-36 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 SMART SM01016 5 87 7.2E-27 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 2.1E-218 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS10045 c72a76901ebb91597ca6fbc379eed406 577 PANTHER PTHR11956 1 577 3.6E-273 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APECO1_RS14775 1b64f96e17b3232b18d4f8cfe5373512 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.165 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14775 1b64f96e17b3232b18d4f8cfe5373512 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.3E-28 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14775 1b64f96e17b3232b18d4f8cfe5373512 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14775 1b64f96e17b3232b18d4f8cfe5373512 82 Gene3D G3DSA:3.30.1320.10 1 78 1.1E-33 T 22-04-2016 IPR023803 Ribosomal protein S16 domain APECO1_RS14775 1b64f96e17b3232b18d4f8cfe5373512 82 SUPERFAMILY SSF54565 1 76 5.89E-29 T 22-04-2016 IPR023803 Ribosomal protein S16 domain APECO1_RS14775 1b64f96e17b3232b18d4f8cfe5373512 82 PANTHER PTHR12919 1 78 2.3E-42 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14775 1b64f96e17b3232b18d4f8cfe5373512 82 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS10505 5e844775d2f2968bc7a95d894fab34bb 334 PANTHER PTHR19372 7 329 3.0E-186 T 22-04-2016 APECO1_RS10505 5e844775d2f2968bc7a95d894fab34bb 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 267 4.3E-29 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APECO1_RS10505 5e844775d2f2968bc7a95d894fab34bb 334 SUPERFAMILY SSF56524 75 330 1.27E-95 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APECO1_RS10505 5e844775d2f2968bc7a95d894fab34bb 334 Gene3D G3DSA:3.90.420.10 67 331 7.2E-77 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APECO1_RS10505 5e844775d2f2968bc7a95d894fab34bb 334 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 2 334 61.926 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 APECO1_RS10505 5e844775d2f2968bc7a95d894fab34bb 334 PANTHER PTHR19372:SF1 7 329 3.0E-186 T 22-04-2016 APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.4E-71 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54768 9 75 5.13E-24 T 22-04-2016 APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.160.20 10 72 7.0E-31 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.5E-29 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.230.10 76 159 1.1E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.7E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54211 79 159 3.54E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.99 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APECO1_RS18985 5e26b9261841fedfc3f886e196ad600b 167 PANTHER PTHR13718 10 164 3.2E-82 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 APECO1_RS08425 176c6969f650efceaf0bf72f2bbf4020 103 PANTHER PTHR34581:SF2 2 103 2.2E-37 T 22-04-2016 APECO1_RS08425 176c6969f650efceaf0bf72f2bbf4020 103 SUPERFAMILY SSF52794 1 102 2.2E-32 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS08425 176c6969f650efceaf0bf72f2bbf4020 103 PANTHER PTHR34581 2 103 2.2E-37 T 22-04-2016 APECO1_RS08425 176c6969f650efceaf0bf72f2bbf4020 103 Gene3D G3DSA:3.40.50.270 1 102 4.9E-36 T 22-04-2016 APECO1_RS08425 176c6969f650efceaf0bf72f2bbf4020 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 5.6E-20 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 Pfam PF13404 AsnC-type helix-turn-helix domain 2 43 9.6E-17 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 SUPERFAMILY SSF54909 62 151 7.24E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 Gene3D G3DSA:1.10.10.10 3 54 7.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 Gene3D G3DSA:3.30.70.920 55 139 7.5E-31 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 PANTHER PTHR30154:SF17 1 152 2.9E-105 T 22-04-2016 APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.3E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.3E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.3E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 SUPERFAMILY SSF46785 1 61 1.79E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 Pfam PF01037 Lrp/AsnC ligand binding domain 68 142 7.3E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 PANTHER PTHR30154 1 152 2.9E-105 T 22-04-2016 APECO1_RS02275 fec718c80e00354a5a4a825b5ad0a9e8 152 SMART SM00344 2 111 1.2E-37 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APECO1_RS21340 3d5b7f08a6fc40f28ad8d1157f889b71 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.973 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APECO1_RS21340 3d5b7f08a6fc40f28ad8d1157f889b71 207 PANTHER PTHR31760 1 207 4.1E-88 T 22-04-2016 APECO1_RS21340 3d5b7f08a6fc40f28ad8d1157f889b71 207 PANTHER PTHR31760:SF0 1 207 4.1E-88 T 22-04-2016 APECO1_RS21340 3d5b7f08a6fc40f28ad8d1157f889b71 207 SUPERFAMILY SSF53335 4 204 1.69E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS21340 3d5b7f08a6fc40f28ad8d1157f889b71 207 PIRSF PIRSF003078 1 207 1.1E-70 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APECO1_RS21340 3d5b7f08a6fc40f28ad8d1157f889b71 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 1.7E-68 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APECO1_RS21340 3d5b7f08a6fc40f28ad8d1157f889b71 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 5.3E-63 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APECO1_RS21340 3d5b7f08a6fc40f28ad8d1157f889b71 207 Gene3D G3DSA:3.40.50.150 4 205 7.1E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Gene3D G3DSA:3.40.50.740 149 205 8.8E-4 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Gene3D G3DSA:3.40.50.740 108 117 8.8E-4 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Gene3D G3DSA:4.10.1200.10 1 28 5.6E-19 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1124 1151 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 PANTHER PTHR11615:SF165 696 835 0.0 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 PANTHER PTHR11615:SF165 994 1228 0.0 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 PANTHER PTHR11615:SF165 34 413 0.0 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 PANTHER PTHR11615:SF165 851 876 0.0 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Gene3D G3DSA:3.40.50.740 592 778 3.6E-60 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Gene3D G3DSA:3.40.228.10 486 591 2.5E-77 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Gene3D G3DSA:3.40.228.10 218 336 2.5E-77 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 SUPERFAMILY SSF53706 5 1070 0.0 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 PANTHER PTHR11615 696 835 0.0 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 PANTHER PTHR11615 994 1228 0.0 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 PANTHER PTHR11615 34 413 0.0 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 PANTHER PTHR11615 851 876 0.0 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1199 1.1E-19 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 776 793 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1234 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 4 40 1.4E-16 T 22-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Pfam PF00384 Molybdopterin oxidoreductase 108 832 2.0E-168 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Gene3D G3DSA:2.40.40.20 1054 1233 7.6E-43 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 SMART SM00926 43 105 1.9E-7 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Gene3D G3DSA:3.90.55.10 779 833 3.8E-7 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 Gene3D G3DSA:2.20.25.90 52 98 1.0E-31 T 22-04-2016 APECO1_RS08140 2d5f7c1891f5108347d0b7a7cdfe80b5 1246 SUPERFAMILY SSF50692 1082 1235 3.16E-45 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 Pfam PF01095 Pectinesterase 194 339 4.2E-11 T 22-04-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 Gene3D G3DSA:2.160.20.10 77 423 2.1E-68 T 22-04-2016 IPR012334 Pectin lyase fold APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 PANTHER PTHR31321 48 170 7.8E-74 T 22-04-2016 APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 PANTHER PTHR31321:SF1 48 170 7.8E-74 T 22-04-2016 APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 PANTHER PTHR31321 191 345 7.8E-74 T 22-04-2016 APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 PANTHER PTHR31321:SF1 191 345 7.8E-74 T 22-04-2016 APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 SUPERFAMILY SSF51126 407 420 4.49E-37 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 SUPERFAMILY SSF51126 75 155 4.49E-37 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 SUPERFAMILY SSF51126 192 376 4.49E-37 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS03735 36746094b1de5e999ec9c5306e70df5c 427 ProSitePatterns PS00503 Pectinesterase signature 2. 280 289 - T 22-04-2016 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 Gene3D G3DSA:3.30.450.40 293 348 1.8E-4 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 552 8.3E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 Pfam PF07694 5TMR of 5TMR-LYT 29 192 3.9E-43 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 PANTHER PTHR34220 1 558 0.0 T 22-04-2016 APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 Pfam PF06580 Histidine kinase 359 438 1.1E-24 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 Gene3D G3DSA:3.30.565.10 411 553 2.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 SUPERFAMILY SSF55781 226 345 1.99E-7 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 PANTHER PTHR34220:SF2 1 558 0.0 T 22-04-2016 APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 SMART SM00387 452 554 3.5E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 SUPERFAMILY SSF55874 414 551 1.31E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13420 ca2322f37959d309ac15c83c1c3d6764 565 Pfam PF01590 GAF domain 239 346 3.6E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 PANTHER PTHR11019:SF77 33 284 1.6E-80 T 22-04-2016 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 SUPERFAMILY SSF46689 229 280 4.48E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 Pfam PF12833 Helix-turn-helix domain 199 278 4.1E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 Pfam PF12852 Cupin 2 162 6.0E-19 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 Gene3D G3DSA:2.60.120.10 41 88 3.0E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 SMART SM00342 193 276 1.0E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 PANTHER PTHR11019 33 284 1.6E-80 T 22-04-2016 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 Gene3D G3DSA:1.10.10.60 176 230 4.8E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 SUPERFAMILY SSF46689 176 224 9.47E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 SUPERFAMILY SSF51182 43 97 5.27E-5 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 Gene3D G3DSA:1.10.10.60 231 279 6.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 6.8E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS01610 de1abb11457b8b81b36c605733a54823 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 6.8E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS08560 8eb876680642e0e3c9fceb814c29c0f5 406 PANTHER PTHR18964 63 403 9.0E-258 T 22-04-2016 APECO1_RS08560 8eb876680642e0e3c9fceb814c29c0f5 406 SUPERFAMILY SSF53067 87 391 4.57E-45 T 22-04-2016 APECO1_RS08560 8eb876680642e0e3c9fceb814c29c0f5 406 Gene3D G3DSA:3.30.420.40 224 375 5.1E-43 T 22-04-2016 APECO1_RS08560 8eb876680642e0e3c9fceb814c29c0f5 406 Gene3D G3DSA:1.10.10.10 12 80 6.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08560 8eb876680642e0e3c9fceb814c29c0f5 406 SUPERFAMILY SSF46785 12 77 1.21E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08560 8eb876680642e0e3c9fceb814c29c0f5 406 Pfam PF00480 ROK family 90 389 2.7E-52 T 22-04-2016 IPR000600 ROK family APECO1_RS08560 8eb876680642e0e3c9fceb814c29c0f5 406 Gene3D G3DSA:3.30.420.40 83 223 9.2E-33 T 22-04-2016 APECO1_RS08560 8eb876680642e0e3c9fceb814c29c0f5 406 PANTHER PTHR18964:SF127 63 403 9.0E-258 T 22-04-2016 APECO1_RS11295 bbd2e0dc39658000d429f221344795d3 334 Pfam PF14897 EpsG family 11 326 2.1E-31 T 22-04-2016 APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 SUPERFAMILY SSF46894 136 234 7.65E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 SMART SM00448 4 114 6.3E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 PANTHER PTHR26402 4 238 4.1E-156 T 22-04-2016 APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 Pfam PF00072 Response regulator receiver domain 6 113 8.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.4E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 PANTHER PTHR26402:SF586 4 238 4.1E-156 T 22-04-2016 APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 SMART SM00862 156 232 3.7E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 Gene3D G3DSA:1.10.10.10 135 233 1.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 Gene3D G3DSA:3.40.50.2300 2 123 1.8E-35 T 22-04-2016 APECO1_RS25660 1917eff55d421295934a3e3ab9e8c178 238 SUPERFAMILY SSF52172 2 126 2.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 22-04-2016 APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 Gene3D G3DSA:3.30.1240.10 82 176 6.6E-18 T 22-04-2016 APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 SUPERFAMILY SSF56784 1 264 9.79E-69 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 1.2E-26 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 PANTHER PTHR10000:SF20 1 266 3.8E-147 T 22-04-2016 APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 PANTHER PTHR10000 1 266 3.8E-147 T 22-04-2016 APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 Gene3D G3DSA:3.40.50.1000 1 72 1.3E-56 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 Gene3D G3DSA:3.40.50.1000 177 265 1.3E-56 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 1.2E-70 T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS21775 c29a9c8f2263dde0cb2c8c8c68f402f4 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.3E-62 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 PANTHER PTHR11615:SF114 270 757 4.1E-282 T 22-04-2016 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 PANTHER PTHR11615:SF114 29 251 4.1E-282 T 22-04-2016 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 12 758 0.0 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 Pfam PF00384 Molybdopterin oxidoreductase 108 464 7.8E-29 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 Gene3D G3DSA:3.40.50.740 108 181 2.1E-50 T 22-04-2016 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 Gene3D G3DSA:3.40.50.740 394 625 2.1E-50 T 22-04-2016 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 PIRSF PIRSF000144 1 759 0.0 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 Gene3D G3DSA:3.40.228.10 182 393 5.4E-62 T 22-04-2016 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 Gene3D G3DSA:2.40.40.20 641 757 3.3E-8 T 22-04-2016 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 PANTHER PTHR11615 270 757 4.1E-282 T 22-04-2016 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 PANTHER PTHR11615 29 251 4.1E-282 T 22-04-2016 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 SUPERFAMILY SSF50692 641 758 1.42E-12 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 Pfam PF01568 Molydopterin dinucleotide binding domain 642 751 4.9E-6 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS08275 0531c9a5c895b786fbf2d75881e92f96 759 SUPERFAMILY SSF53706 46 625 5.63E-147 T 22-04-2016 APECO1_RS11910 d7493cfd3e966c2f875c0264e4a00bd9 243 PANTHER PTHR30177 1 235 6.1E-144 T 22-04-2016 APECO1_RS11910 d7493cfd3e966c2f875c0264e4a00bd9 243 SUPERFAMILY SSF161098 46 233 1.57E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS11910 d7493cfd3e966c2f875c0264e4a00bd9 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 237 5.4E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS11910 d7493cfd3e966c2f875c0264e4a00bd9 243 PANTHER PTHR30177:SF11 1 235 6.1E-144 T 22-04-2016 APECO1_RS11910 d7493cfd3e966c2f875c0264e4a00bd9 243 Gene3D G3DSA:1.10.3720.10 8 239 9.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS25105 192878e092156fbcf1e17ef713a4fa8f 157 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 19 146 3.4E-29 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component APECO1_RS25105 192878e092156fbcf1e17ef713a4fa8f 157 PANTHER PTHR35011 1 153 2.1E-23 T 22-04-2016 APECO1_RS20310 b6abb62de2357e28c4cffa4189ca602d 327 PANTHER PTHR24220:SF576 5 321 2.3E-233 T 22-04-2016 APECO1_RS20310 b6abb62de2357e28c4cffa4189ca602d 327 SMART SM00382 32 231 7.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS20310 b6abb62de2357e28c4cffa4189ca602d 327 Pfam PF00005 ABC transporter 24 181 1.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS20310 b6abb62de2357e28c4cffa4189ca602d 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 3.6E-28 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS20310 b6abb62de2357e28c4cffa4189ca602d 327 SUPERFAMILY SSF52540 3 253 1.45E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20310 b6abb62de2357e28c4cffa4189ca602d 327 Gene3D G3DSA:3.40.50.300 2 255 6.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20310 b6abb62de2357e28c4cffa4189ca602d 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS20310 b6abb62de2357e28c4cffa4189ca602d 327 PANTHER PTHR24220 5 321 2.3E-233 T 22-04-2016 APECO1_RS20310 b6abb62de2357e28c4cffa4189ca602d 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 9.4E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS08750 ee2d4d332f4f747defc6f4b370765457 352 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.936 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APECO1_RS08750 ee2d4d332f4f747defc6f4b370765457 352 PANTHER PTHR30578 3 351 6.6E-172 T 22-04-2016 APECO1_RS08750 ee2d4d332f4f747defc6f4b370765457 352 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 2.5E-108 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 APECO1_RS08750 ee2d4d332f4f747defc6f4b370765457 352 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 1.1E-150 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APECO1_RS08750 ee2d4d332f4f747defc6f4b370765457 352 PANTHER PTHR30578:SF0 3 351 6.6E-172 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APECO1_RS24210 9ff5eaf3b5e90373d264af3cbbf03243 350 SUPERFAMILY SSF52540 114 340 5.55E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24210 9ff5eaf3b5e90373d264af3cbbf03243 350 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 340 37.989 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APECO1_RS24210 9ff5eaf3b5e90373d264af3cbbf03243 350 Gene3D G3DSA:3.40.50.300 115 275 2.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24210 9ff5eaf3b5e90373d264af3cbbf03243 350 PANTHER PTHR32120:SF2 3 346 4.8E-169 T 22-04-2016 APECO1_RS24210 9ff5eaf3b5e90373d264af3cbbf03243 350 Pfam PF03193 Protein of unknown function, DUF258 100 276 4.6E-57 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 APECO1_RS24210 9ff5eaf3b5e90373d264af3cbbf03243 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 73 334 1.4E-101 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APECO1_RS24210 9ff5eaf3b5e90373d264af3cbbf03243 350 Gene3D G3DSA:1.10.40.50 276 345 5.5E-26 T 22-04-2016 APECO1_RS24210 9ff5eaf3b5e90373d264af3cbbf03243 350 PANTHER PTHR32120 3 346 4.8E-169 T 22-04-2016 APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 Gene3D G3DSA:3.30.2060.10 55 144 8.3E-35 T 22-04-2016 APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 SUPERFAMILY SSF56601 356 646 2.72E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 SUPERFAMILY SSF56601 306 328 2.72E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 PANTHER PTHR32282 129 646 5.6E-270 T 22-04-2016 APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 Gene3D G3DSA:3.40.710.10 326 646 6.7E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 Pfam PF00912 Transglycosylase 153 324 1.5E-54 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 12 646 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 Pfam PF00905 Penicillin binding protein transpeptidase domain 417 646 1.0E-22 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 Pfam PF14814 Bifunctional transglycosylase second domain 57 141 5.4E-28 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 PANTHER PTHR32282:SF11 129 646 5.6E-270 T 22-04-2016 APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 Gene3D G3DSA:1.10.3810.10 149 325 4.4E-63 T 22-04-2016 APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 SUPERFAMILY SSF53955 140 347 1.29E-65 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS26645 a0415b12e9d64fa3ea3fbd36067c838f 646 Gene3D G3DSA:1.20.5.100 1 40 6.5E-24 T 22-04-2016 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 SUPERFAMILY SSF53383 143 615 1.23E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 PANTHER PTHR11751:SF406 560 683 2.4E-113 T 22-04-2016 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 PANTHER PTHR11751:SF406 144 490 2.4E-113 T 22-04-2016 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 PANTHER PTHR11751:SF406 535 543 2.4E-113 T 22-04-2016 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 143 598 1.3E-145 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 PIRSF PIRSF009393 1 764 7.8E-275 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 623 752 2.8E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 Gene3D G3DSA:3.90.1150.10 450 639 1.4E-57 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 SUPERFAMILY SSF55904 628 762 5.75E-38 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 Gene3D G3DSA:3.90.100.10 640 765 9.8E-36 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 PANTHER PTHR11751 560 683 2.4E-113 T 22-04-2016 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 PANTHER PTHR11751 144 490 2.4E-113 T 22-04-2016 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 PANTHER PTHR11751 535 543 2.4E-113 T 22-04-2016 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 23 137 9.7E-16 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 APECO1_RS24000 d2cb3b73fc611ffaf5663169749946fe 789 Gene3D G3DSA:3.40.640.10 143 446 1.1E-96 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 SUPERFAMILY SSF47384 218 302 4.71E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 SMART SM00388 235 301 2.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 Gene3D G3DSA:3.30.565.10 306 450 7.7E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 299 1.4E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 Gene3D G3DSA:1.10.287.130 233 297 7.7E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 449 3.2E-95 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 PANTHER PTHR24423 175 433 5.3E-55 T 22-04-2016 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 451 1.2E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 SMART SM00387 344 452 7.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 SUPERFAMILY SSF55874 290 449 2.33E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 Pfam PF00672 HAMP domain 162 230 3.7E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 PANTHER PTHR24423:SF354 175 433 5.3E-55 T 22-04-2016 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 2.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 2.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS10490 1cb24dad7e4d47b8ae4c5e320256ffb0 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.9E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 TIGRFAM TIGR00746 arcC: carbamate kinase 7 317 3.2E-110 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 Pfam PF00696 Amino acid kinase family 5 287 5.6E-27 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 SUPERFAMILY SSF53633 6 316 2.88E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PIRSF PIRSF000723 2 318 1.4E-132 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PANTHER PTHR30409 1 318 1.6E-125 T 22-04-2016 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PANTHER PTHR30409:SF1 1 318 1.6E-125 T 22-04-2016 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 Gene3D G3DSA:3.40.1160.10 6 317 1.7E-95 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 76 94 5.8E-55 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 268 283 5.8E-55 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 213 228 5.8E-55 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 5.8E-55 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 183 201 5.8E-55 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 45 64 5.8E-55 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS21850 4e838ccd073dcd26a42637b230dbda46 318 PRINTS PR01469 Bacterial carbamate kinase signature 160 179 5.8E-55 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 Pfam PF07840 FadR C-terminal domain 72 234 5.1E-73 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 SMART SM00345 12 71 5.9E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 PANTHER PTHR11751 13 97 1.7E-58 T 22-04-2016 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 SUPERFAMILY SSF48008 79 230 5.75E-65 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.6E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 1.1E-123 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 Gene3D G3DSA:1.20.120.530 80 236 8.9E-69 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 PANTHER PTHR11751:SF402 13 97 1.7E-58 T 22-04-2016 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 162.307 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 Gene3D G3DSA:1.10.10.10 8 76 3.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS06270 48835af5c3e5c8f2b7aba321dfbe6aff 239 SUPERFAMILY SSF46785 11 88 2.48E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08215 06dc6938ab41a048931be9ff423676d1 72 Pfam PF00990 Diguanylate cyclase, GGDEF domain 20 64 3.6E-8 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08215 06dc6938ab41a048931be9ff423676d1 72 SUPERFAMILY SSF55073 18 67 1.49E-10 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS08215 06dc6938ab41a048931be9ff423676d1 72 Gene3D G3DSA:3.30.70.270 20 70 7.5E-11 T 22-04-2016 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 Pfam PF02311 AraC-like ligand binding domain 23 160 8.9E-27 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 SUPERFAMILY SSF51215 8 163 4.05E-39 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 Gene3D G3DSA:1.10.10.60 232 278 1.7E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 PANTHER PTHR11019:SF123 1 281 2.1E-149 T 22-04-2016 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 Gene3D G3DSA:1.10.10.60 173 231 3.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 Pfam PF12833 Helix-turn-helix domain 200 278 4.4E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 Gene3D G3DSA:2.60.120.280 8 168 4.5E-51 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 SUPERFAMILY SSF46689 231 279 2.78E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 SMART SM00342 194 277 7.6E-32 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 PANTHER PTHR11019 1 281 2.1E-149 T 22-04-2016 APECO1_RS00350 bd00b46124158a61e1e9f0c7869d583e 281 SUPERFAMILY SSF46689 176 227 4.39E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS25200 2e6f478cb08e886b38e5daed5d87f8b5 343 PANTHER PTHR18895:SF70 53 343 6.0E-174 T 22-04-2016 APECO1_RS25200 2e6f478cb08e886b38e5daed5d87f8b5 343 SUPERFAMILY SSF53335 154 315 4.07E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS25200 2e6f478cb08e886b38e5daed5d87f8b5 343 Pfam PF05175 Methyltransferase small domain 167 333 8.2E-61 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APECO1_RS25200 2e6f478cb08e886b38e5daed5d87f8b5 343 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS25200 2e6f478cb08e886b38e5daed5d87f8b5 343 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.4E-55 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS25200 2e6f478cb08e886b38e5daed5d87f8b5 343 PANTHER PTHR18895 53 343 6.0E-174 T 22-04-2016 APECO1_RS25200 2e6f478cb08e886b38e5daed5d87f8b5 343 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.461 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS25200 2e6f478cb08e886b38e5daed5d87f8b5 343 Gene3D G3DSA:3.40.50.150 158 332 1.1E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS08175 0a7d6d83b4baa31c7e701c010e853581 94 PANTHER PTHR36924 1 92 1.9E-37 T 22-04-2016 APECO1_RS08175 0a7d6d83b4baa31c7e701c010e853581 94 Gene3D G3DSA:1.10.260.40 1 81 1.3E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS08175 0a7d6d83b4baa31c7e701c010e853581 94 PANTHER PTHR36924:SF2 1 92 1.9E-37 T 22-04-2016 APECO1_RS08175 0a7d6d83b4baa31c7e701c010e853581 94 SUPERFAMILY SSF47413 9 88 3.66E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS08175 0a7d6d83b4baa31c7e701c010e853581 94 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 81 4.5E-27 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 APECO1_RS08175 0a7d6d83b4baa31c7e701c010e853581 94 Pfam PF01381 Helix-turn-helix 14 65 2.3E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS08175 0a7d6d83b4baa31c7e701c010e853581 94 SMART SM00530 12 67 6.6E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 TIGRFAM TIGR00115 tig: trigger factor 13 412 1.0E-143 T 22-04-2016 IPR005215 Trigger factor GO:0015031 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 PANTHER PTHR30560 1 429 1.4E-148 T 22-04-2016 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 SUPERFAMILY SSF109998 248 429 9.42E-48 T 22-04-2016 IPR027304 Trigger factor/SurA domain APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 SUPERFAMILY SSF102735 1 131 5.49E-39 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 236 2.6E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 Gene3D G3DSA:3.30.70.1050 1 117 1.4E-39 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 PIRSF PIRSF003095 1 429 5.6E-131 T 22-04-2016 IPR005215 Trigger factor GO:0015031 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 PANTHER PTHR30560:SF3 1 429 1.4E-148 T 22-04-2016 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 8.4E-41 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 SUPERFAMILY SSF54534 97 241 2.16E-37 T 22-04-2016 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 2.0E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 Gene3D G3DSA:1.10.3120.10 216 388 1.4E-62 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 Gene3D G3DSA:3.10.50.40 151 215 1.3E-9 T 22-04-2016 APECO1_RS02220 af34954a9a459b3283a6fdfc23e7c1da 429 Hamap MF_00303 Trigger factor [tig]. 1 418 22.209 T 22-04-2016 IPR005215 Trigger factor GO:0015031 APECO1_RS25565 ec9d968bc40d42032cb52ebca1d57d5c 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.534 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APECO1_RS25565 ec9d968bc40d42032cb52ebca1d57d5c 239 SUPERFAMILY SSF53167 3 234 2.36E-94 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS25565 ec9d968bc40d42032cb52ebca1d57d5c 239 PANTHER PTHR21234:SF8 3 234 7.5E-84 T 22-04-2016 APECO1_RS25565 ec9d968bc40d42032cb52ebca1d57d5c 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APECO1_RS25565 ec9d968bc40d42032cb52ebca1d57d5c 239 Gene3D G3DSA:3.40.50.1580 10 233 1.2E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS25565 ec9d968bc40d42032cb52ebca1d57d5c 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 5.1E-128 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APECO1_RS25565 ec9d968bc40d42032cb52ebca1d57d5c 239 PANTHER PTHR21234 3 234 7.5E-84 T 22-04-2016 IPR018017 Nucleoside phosphorylase APECO1_RS25565 ec9d968bc40d42032cb52ebca1d57d5c 239 Pfam PF01048 Phosphorylase superfamily 15 218 2.1E-39 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS03150 d7b01c3e14a7b38ae3849f7239eec72d 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 3.2E-49 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS03150 d7b01c3e14a7b38ae3849f7239eec72d 302 Gene3D G3DSA:3.40.190.10 38 125 7.2E-32 T 22-04-2016 APECO1_RS03150 d7b01c3e14a7b38ae3849f7239eec72d 302 Gene3D G3DSA:3.40.190.10 234 276 7.2E-32 T 22-04-2016 APECO1_RS03150 d7b01c3e14a7b38ae3849f7239eec72d 302 SUPERFAMILY SSF53850 8 274 3.5E-65 T 22-04-2016 APECO1_RS03150 d7b01c3e14a7b38ae3849f7239eec72d 302 PANTHER PTHR30085:SF2 10 300 1.2E-143 T 22-04-2016 APECO1_RS03150 d7b01c3e14a7b38ae3849f7239eec72d 302 Gene3D G3DSA:3.40.190.10 126 233 8.4E-33 T 22-04-2016 APECO1_RS03150 d7b01c3e14a7b38ae3849f7239eec72d 302 PANTHER PTHR30085 10 300 1.2E-143 T 22-04-2016 APECO1_RS03150 d7b01c3e14a7b38ae3849f7239eec72d 302 SMART SM00062 41 273 4.5E-72 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS05870 ceccece2bf79d8567ba18fa76e836c53 233 Pfam PF06992 Replication protein P 1 233 3.2E-163 T 22-04-2016 IPR009731 Replication P GO:0006270 APECO1_RS14635 7fc84d19c520e1955a27e224b6779800 513 PANTHER PTHR35004:SF2 6 457 1.1E-105 T 22-04-2016 APECO1_RS14635 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS14635 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 146 305 1.1E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS14635 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 6.6E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APECO1_RS14635 7fc84d19c520e1955a27e224b6779800 513 PANTHER PTHR35004 6 457 1.1E-105 T 22-04-2016 APECO1_RS16835 7fc84d19c520e1955a27e224b6779800 513 PANTHER PTHR35004:SF2 6 457 1.1E-105 T 22-04-2016 APECO1_RS16835 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS16835 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 146 305 1.1E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS16835 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 6.6E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APECO1_RS16835 7fc84d19c520e1955a27e224b6779800 513 PANTHER PTHR35004 6 457 1.1E-105 T 22-04-2016 APECO1_RS16045 7fc84d19c520e1955a27e224b6779800 513 PANTHER PTHR35004:SF2 6 457 1.1E-105 T 22-04-2016 APECO1_RS16045 7fc84d19c520e1955a27e224b6779800 513 SUPERFAMILY SSF53098 166 309 5.31E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS16045 7fc84d19c520e1955a27e224b6779800 513 Gene3D G3DSA:3.30.420.10 146 305 1.1E-9 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS16045 7fc84d19c520e1955a27e224b6779800 513 Pfam PF00665 Integrase core domain 138 268 6.6E-19 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APECO1_RS16045 7fc84d19c520e1955a27e224b6779800 513 PANTHER PTHR35004 6 457 1.1E-105 T 22-04-2016 APECO1_RS25515 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 Pfam PF04972 BON domain 135 199 8.9E-20 T 22-04-2016 IPR007055 BON domain APECO1_RS25515 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 Pfam PF04972 BON domain 55 122 3.7E-20 T 22-04-2016 IPR007055 BON domain APECO1_RS25515 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 SMART SM00749 60 123 2.9E-13 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APECO1_RS25515 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 SMART SM00749 139 201 1.0E-10 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APECO1_RS25515 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 PANTHER PTHR34606:SF3 29 201 6.9E-67 T 22-04-2016 APECO1_RS25515 59bd70e631fe0e3e5f6ba0e4fbdaef5d 201 PANTHER PTHR34606 29 201 6.9E-67 T 22-04-2016 APECO1_RS07595 35353f35684529867f3c6d9fc1290159 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 86 468 1.6E-124 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APECO1_RS07595 35353f35684529867f3c6d9fc1290159 485 Pfam PF02386 Cation transport protein 40 479 1.2E-127 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APECO1_RS07595 35353f35684529867f3c6d9fc1290159 485 PIRSF PIRSF006247 1 485 3.3E-171 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APECO1_RS07595 35353f35684529867f3c6d9fc1290159 485 PANTHER PTHR32024:SF2 3 484 6.2E-231 T 22-04-2016 APECO1_RS07595 35353f35684529867f3c6d9fc1290159 485 PANTHER PTHR32024 3 484 6.2E-231 T 22-04-2016 APECO1_RS01020 30d60545e3ad3241b4da975a6f0c9128 274 SUPERFAMILY SSF54001 64 160 4.58E-29 T 22-04-2016 APECO1_RS01020 30d60545e3ad3241b4da975a6f0c9128 274 SUPERFAMILY SSF54001 201 260 4.58E-29 T 22-04-2016 APECO1_RS01020 30d60545e3ad3241b4da975a6f0c9128 274 Gene3D G3DSA:2.30.30.330 63 237 1.7E-25 T 22-04-2016 APECO1_RS01020 30d60545e3ad3241b4da975a6f0c9128 274 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 65 156 1.5E-9 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family APECO1_RS05290 eed436005d225ac563ab9c719074e7b8 517 PANTHER PTHR30504 7 517 0.0 T 22-04-2016 APECO1_RS05290 eed436005d225ac563ab9c719074e7b8 517 SUPERFAMILY SSF81296 403 516 5.46E-34 T 22-04-2016 IPR014756 Immunoglobulin E-set APECO1_RS05290 eed436005d225ac563ab9c719074e7b8 517 Gene3D G3DSA:2.70.98.10 28 401 2.3E-177 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APECO1_RS05290 eed436005d225ac563ab9c719074e7b8 517 PIRSF PIRSF006281 1 517 1.4E-243 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 APECO1_RS05290 eed436005d225ac563ab9c719074e7b8 517 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 12 515 64.051 T 22-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 APECO1_RS05290 eed436005d225ac563ab9c719074e7b8 517 Gene3D G3DSA:2.60.40.10 405 516 1.2E-43 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS05290 eed436005d225ac563ab9c719074e7b8 517 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 29 513 3.2E-201 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 APECO1_RS05290 eed436005d225ac563ab9c719074e7b8 517 PANTHER PTHR30504:SF4 7 517 0.0 T 22-04-2016 APECO1_RS05290 eed436005d225ac563ab9c719074e7b8 517 SUPERFAMILY SSF74650 29 399 3.08E-166 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 60.299 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 3.7E-231 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 PANTHER PTHR10196 1 502 1.5E-275 T 22-04-2016 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 5.3E-62 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 Gene3D G3DSA:3.30.420.40 2 254 1.1E-108 T 22-04-2016 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 SUPERFAMILY SSF53067 5 256 1.76E-96 T 22-04-2016 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 PIRSF PIRSF000538 4 502 2.9E-178 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 4.1E-96 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 SUPERFAMILY SSF53067 256 498 1.73E-87 T 22-04-2016 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 PANTHER PTHR10196:SF9 1 502 1.5E-275 T 22-04-2016 APECO1_RS22395 5209eac880717d0df7e3e72045ac99b9 502 Gene3D G3DSA:3.30.420.40 256 498 4.5E-105 T 22-04-2016 APECO1_RS13425 719d59531a272d26c200304840520b21 245 Pfam PF04397 LytTr DNA-binding domain 147 243 2.3E-33 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APECO1_RS13425 719d59531a272d26c200304840520b21 245 PANTHER PTHR26402 1 184 5.5E-49 T 22-04-2016 APECO1_RS13425 719d59531a272d26c200304840520b21 245 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS13425 719d59531a272d26c200304840520b21 245 SUPERFAMILY SSF52172 2 154 2.56E-26 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS13425 719d59531a272d26c200304840520b21 245 Gene3D G3DSA:3.40.50.2300 2 126 8.9E-30 T 22-04-2016 APECO1_RS13425 719d59531a272d26c200304840520b21 245 PANTHER PTHR26402:SF472 1 184 5.5E-49 T 22-04-2016 APECO1_RS13425 719d59531a272d26c200304840520b21 245 SMART SM00850 146 244 3.2E-39 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APECO1_RS13425 719d59531a272d26c200304840520b21 245 SMART SM00448 1 112 1.4E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS13425 719d59531a272d26c200304840520b21 245 Gene3D G3DSA:2.20.25.10 207 245 5.2E-14 T 22-04-2016 APECO1_RS13425 719d59531a272d26c200304840520b21 245 Gene3D G3DSA:2.40.50.40 137 206 8.9E-26 T 22-04-2016 APECO1_RS17470 41cd95fed8352133b976830ca3ed6a6f 219 PANTHER PTHR30353 1 216 4.2E-173 T 22-04-2016 IPR032818 DedA family APECO1_RS17470 41cd95fed8352133b976830ca3ed6a6f 219 Pfam PF09335 SNARE associated Golgi protein 48 173 9.5E-19 T 22-04-2016 IPR032816 SNARE associated Golgi protein APECO1_RS17470 41cd95fed8352133b976830ca3ed6a6f 219 PANTHER PTHR30353:SF10 1 216 4.2E-173 T 22-04-2016 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 4.3E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 4.3E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 4.3E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 4.3E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 4.3E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 4.3E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 4.3E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 4.3E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PIRSF PIRSF001480 1 391 2.1E-113 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 SUPERFAMILY SSF51182 1 375 3.38E-101 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 Gene3D G3DSA:2.60.120.10 288 376 1.3E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 Pfam PF01238 Phosphomannose isomerase type I 1 356 2.8E-122 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PANTHER PTHR10309:SF0 1 374 4.3E-145 T 22-04-2016 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 384 3.7E-144 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 Gene3D G3DSA:2.60.120.10 6 140 1.6E-65 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 Gene3D G3DSA:2.60.120.10 238 273 1.6E-65 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 PANTHER PTHR10309 1 374 4.3E-145 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 Gene3D G3DSA:1.10.441.10 274 287 2.2E-24 T 22-04-2016 APECO1_RS08660 16c547ee46915b8c51db078066ac2423 391 Gene3D G3DSA:1.10.441.10 141 231 2.2E-24 T 22-04-2016 APECO1_RS16260 d4ee2137583183f3517e38b55e044e06 278 PIRSF PIRSF006625 1 278 2.2E-134 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APECO1_RS16260 d4ee2137583183f3517e38b55e044e06 278 PANTHER PTHR38461 1 278 4.3E-183 T 22-04-2016 APECO1_RS16260 d4ee2137583183f3517e38b55e044e06 278 SUPERFAMILY SSF51182 2 262 1.04E-109 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS16260 d4ee2137583183f3517e38b55e044e06 278 Gene3D G3DSA:2.60.120.520 20 133 1.8E-57 T 22-04-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APECO1_RS16260 d4ee2137583183f3517e38b55e044e06 278 Pfam PF04962 KduI/IolB family 31 273 2.3E-42 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APECO1_RS16260 d4ee2137583183f3517e38b55e044e06 278 Gene3D G3DSA:2.60.120.500 134 278 3.7E-79 T 22-04-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APECO1_RS16260 d4ee2137583183f3517e38b55e044e06 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 57.033 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 Gene3D G3DSA:3.30.470.20 85 103 2.8E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 Gene3D G3DSA:3.30.470.20 181 305 2.8E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 4.5E-72 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 6.4E-21 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 SUPERFAMILY SSF56059 97 302 7.58E-57 T 22-04-2016 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.414 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 2.9E-112 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 PANTHER PTHR23132:SF0 1 305 1.9E-99 T 22-04-2016 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 SUPERFAMILY SSF52440 3 96 1.63E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 Gene3D G3DSA:3.30.1490.20 107 180 2.5E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 PIRSF PIRSF039102 38 306 1.8E-99 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 PANTHER PTHR23132 1 305 1.9E-99 T 22-04-2016 APECO1_RS00500 2780e395151bf76998a9b10cfaf1deb1 306 Gene3D G3DSA:3.40.50.20 3 84 7.3E-28 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS13840 51afe518ba8aac3aa7785630f6a70ddf 232 SUPERFAMILY SSF53474 5 206 2.59E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS13840 51afe518ba8aac3aa7785630f6a70ddf 232 PANTHER PTHR10655 7 206 9.5E-29 T 22-04-2016 APECO1_RS13840 51afe518ba8aac3aa7785630f6a70ddf 232 PANTHER PTHR10655:SF17 7 206 9.5E-29 T 22-04-2016 APECO1_RS13840 51afe518ba8aac3aa7785630f6a70ddf 232 Gene3D G3DSA:3.40.50.1820 7 207 1.1E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS13840 51afe518ba8aac3aa7785630f6a70ddf 232 Pfam PF02230 Phospholipase/Carboxylesterase 4 209 2.7E-56 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 APECO1_RS01750 61c3a72ddd5482da590d7a33260dff02 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 307 6.6E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS01750 61c3a72ddd5482da590d7a33260dff02 323 PANTHER PTHR32196 3 320 1.1E-112 T 22-04-2016 APECO1_RS01750 61c3a72ddd5482da590d7a33260dff02 323 PANTHER PTHR32196:SF35 3 320 1.1E-112 T 22-04-2016 APECO1_RS12775 9ccfa44c646477a44dd3b707d777f3b2 506 PANTHER PTHR10283 91 346 4.2E-156 T 22-04-2016 APECO1_RS12775 9ccfa44c646477a44dd3b707d777f3b2 506 PANTHER PTHR10283 363 497 4.2E-156 T 22-04-2016 APECO1_RS12775 9ccfa44c646477a44dd3b707d777f3b2 506 Pfam PF03606 C4-dicarboxylate anaerobic carrier 15 501 5.1E-164 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 APECO1_RS12775 9ccfa44c646477a44dd3b707d777f3b2 506 PANTHER PTHR10283:SF43 91 346 4.2E-156 T 22-04-2016 APECO1_RS12775 9ccfa44c646477a44dd3b707d777f3b2 506 PANTHER PTHR10283:SF43 363 497 4.2E-156 T 22-04-2016 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.4E-29 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.4E-29 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.4E-29 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.4E-29 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 Gene3D G3DSA:1.10.40.30 375 432 8.5E-31 T 22-04-2016 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PANTHER PTHR11444 3 456 4.0E-244 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 Gene3D G3DSA:1.10.275.10 1 107 1.5E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 Pfam PF00206 Lyase 6 301 5.3E-101 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.5E-24 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PANTHER PTHR11444:SF3 3 456 4.0E-244 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 Gene3D G3DSA:1.20.200.10 108 374 7.2E-105 T 22-04-2016 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.679 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 SUPERFAMILY SSF48557 3 456 8.64E-143 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 3.9E-216 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 4.0E-68 T 22-04-2016 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 4.0E-68 T 22-04-2016 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 4.0E-68 T 22-04-2016 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 4.0E-68 T 22-04-2016 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 4.0E-68 T 22-04-2016 APECO1_RS22590 969c00af1ca65ab58e70a6ceb0b6de93 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 4.0E-68 T 22-04-2016 APECO1_RS24850 f9d985c495ed6f3e8915a416f7321ad8 878 SUPERFAMILY SSF141729 46 170 1.27E-37 T 22-04-2016 APECO1_RS24850 f9d985c495ed6f3e8915a416f7321ad8 878 PANTHER PTHR30451:SF2 13 878 0.0 T 22-04-2016 APECO1_RS24850 f9d985c495ed6f3e8915a416f7321ad8 878 Pfam PF13953 PapC C-terminal domain 799 863 1.7E-25 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APECO1_RS24850 f9d985c495ed6f3e8915a416f7321ad8 878 Pfam PF00577 Outer membrane usher protein 208 790 2.4E-229 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS24850 f9d985c495ed6f3e8915a416f7321ad8 878 PANTHER PTHR30451 13 878 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS24850 f9d985c495ed6f3e8915a416f7321ad8 878 Pfam PF13954 PapC N-terminal domain 48 193 6.1E-51 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APECO1_RS24850 f9d985c495ed6f3e8915a416f7321ad8 878 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 325 335 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APECO1_RS15085 9112855acbc268ced5ce5555b7d45a54 224 Pfam PF00717 Peptidase S24-like 133 200 1.4E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APECO1_RS15085 9112855acbc268ced5ce5555b7d45a54 224 SUPERFAMILY SSF51306 90 214 2.22E-28 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APECO1_RS15085 9112855acbc268ced5ce5555b7d45a54 224 Gene3D G3DSA:2.10.109.10 127 217 2.2E-25 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APECO1_RS15085 9112855acbc268ced5ce5555b7d45a54 224 PANTHER PTHR33516:SF3 24 221 5.4E-122 T 22-04-2016 APECO1_RS15085 9112855acbc268ced5ce5555b7d45a54 224 PANTHER PTHR33516 24 221 5.4E-122 T 22-04-2016 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 SUPERFAMILY SSF142921 12 66 1.02E-6 T 22-04-2016 IPR008893 WGR domain APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 Pfam PF05406 WGR domain 6 69 4.6E-14 T 22-04-2016 IPR008893 WGR domain APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 Pfam PF13569 Domain of unknown function (DUF4132) 986 1171 2.0E-46 T 22-04-2016 IPR025406 Domain of unknown function DUF4132 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 SMART SM00773 1 71 5.2E-14 T 22-04-2016 IPR008893 WGR domain APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 PANTHER PTHR30634 772 939 1.6E-300 T 22-04-2016 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 PANTHER PTHR30634 1067 1262 1.6E-300 T 22-04-2016 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 PANTHER PTHR30634 964 1026 1.6E-300 T 22-04-2016 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 PANTHER PTHR30634 1 430 1.6E-300 T 22-04-2016 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 PANTHER PTHR30634:SF7 772 939 1.6E-300 T 22-04-2016 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 PANTHER PTHR30634:SF7 1067 1262 1.6E-300 T 22-04-2016 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 PANTHER PTHR30634:SF7 964 1026 1.6E-300 T 22-04-2016 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 PANTHER PTHR30634:SF7 1 430 1.6E-300 T 22-04-2016 APECO1_RS11840 85a3b9c7bab94acd296509180e2305ad 1262 Gene3D G3DSA:2.20.140.10 1 69 1.3E-29 T 22-04-2016 IPR008893 WGR domain APECO1_RS02945 3e6a437500a00540dce7de620f38aad7 248 SUPERFAMILY SSF54423 19 78 7.98E-23 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APECO1_RS02945 3e6a437500a00540dce7de620f38aad7 248 PANTHER PTHR35272 1 246 1.6E-173 T 22-04-2016 APECO1_RS02945 3e6a437500a00540dce7de620f38aad7 248 SUPERFAMILY SSF52833 82 242 2.12E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02945 3e6a437500a00540dce7de620f38aad7 248 Pfam PF13098 Thioredoxin-like domain 115 241 6.1E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02945 3e6a437500a00540dce7de620f38aad7 248 Gene3D G3DSA:3.40.30.10 105 246 1.2E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02945 3e6a437500a00540dce7de620f38aad7 248 PANTHER PTHR35272:SF2 1 246 1.6E-173 T 22-04-2016 APECO1_RS18620 c650f3be85e5a06825f2ce74bcca8888 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.525 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 APECO1_RS18620 c650f3be85e5a06825f2ce74bcca8888 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 9.4E-20 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 SUPERFAMILY SSF111369 46 219 7.19E-24 T 22-04-2016 APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 PANTHER PTHR30367 4 308 1.1E-211 T 22-04-2016 APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 289 3.5E-34 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 61.876 T 22-04-2016 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 Pfam PF13533 Biotin-lipoyl like 47 95 2.0E-20 T 22-04-2016 APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 PANTHER PTHR30367:SF3 4 308 1.1E-211 T 22-04-2016 APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 Gene3D G3DSA:1.25.40.10 75 153 6.3E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 Gene3D G3DSA:2.40.50.100 154 188 2.1E-19 T 22-04-2016 APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 Gene3D G3DSA:2.40.50.100 47 74 2.1E-19 T 22-04-2016 APECO1_RS18615 fa2fe200de2f1ea3c5ec423f407d5286 310 Pfam PF13437 HlyD family secretion protein 156 239 3.3E-9 T 22-04-2016 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.418 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.7E-109 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:3.40.50.10490 158 236 9.5E-68 T 22-04-2016 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:3.40.50.10490 23 99 9.5E-68 T 22-04-2016 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 PANTHER PTHR12534 1 235 1.2E-124 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 Pfam PF00318 Ribosomal protein S2 9 224 3.7E-94 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 SUPERFAMILY SSF52313 6 235 1.96E-96 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00895 f0974d30d7835f4b52b27c2f40e89ca4 241 Gene3D G3DSA:1.10.287.610 100 152 3.1E-27 T 22-04-2016 APECO1_RS03855 b79067cd97ffb5c6a0610164317c6046 331 SUPERFAMILY SSF111369 41 98 8.76E-9 T 22-04-2016 APECO1_RS03855 b79067cd97ffb5c6a0610164317c6046 331 Gene3D G3DSA:2.40.50.100 43 76 2.7E-13 T 22-04-2016 APECO1_RS03855 b79067cd97ffb5c6a0610164317c6046 331 Gene3D G3DSA:2.40.50.100 203 234 2.7E-13 T 22-04-2016 APECO1_RS03855 b79067cd97ffb5c6a0610164317c6046 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 318 6.1E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS03855 b79067cd97ffb5c6a0610164317c6046 331 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 1 327 50.5 T 22-04-2016 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG APECO1_RS03855 b79067cd97ffb5c6a0610164317c6046 331 PANTHER PTHR32347:SF12 4 324 3.2E-98 T 22-04-2016 APECO1_RS03855 b79067cd97ffb5c6a0610164317c6046 331 SUPERFAMILY SSF111369 112 169 1.96E-5 T 22-04-2016 APECO1_RS03855 b79067cd97ffb5c6a0610164317c6046 331 SUPERFAMILY SSF111369 176 323 4.32E-13 T 22-04-2016 APECO1_RS03855 b79067cd97ffb5c6a0610164317c6046 331 PANTHER PTHR32347 4 324 3.2E-98 T 22-04-2016 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 364 1.8E-84 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 SUPERFAMILY SSF53927 3 145 9.54E-51 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 5.5E-24 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 1.5E-160 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 PANTHER PTHR11079:SF10 2 214 4.8E-72 T 22-04-2016 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 SUPERFAMILY SSF53597 144 362 2.49E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 PANTHER PTHR11079 2 214 4.8E-72 T 22-04-2016 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 Gene3D G3DSA:3.40.430.10 129 363 5.7E-71 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 Gene3D G3DSA:3.40.140.10 2 128 3.0E-38 T 22-04-2016 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 Pfam PF01872 RibD C-terminal domain 147 362 6.1E-65 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APECO1_RS02105 654d41b0d2332743a305cf7012d8880b 367 PIRSF PIRSF006769 1 367 1.9E-142 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APECO1_RS04740 679f9d441d38637cd2f65af2dc47cc11 182 PANTHER PTHR37425 1 182 9.3E-80 T 22-04-2016 APECO1_RS04740 679f9d441d38637cd2f65af2dc47cc11 182 Gene3D G3DSA:3.30.1380.10 67 182 4.1E-29 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APECO1_RS04740 679f9d441d38637cd2f65af2dc47cc11 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 1.2E-61 T 22-04-2016 IPR010275 Protein of unknown function DUF882 APECO1_RS04740 679f9d441d38637cd2f65af2dc47cc11 182 SUPERFAMILY SSF55166 68 182 1.33E-31 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF100920 384 535 4.58E-50 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 128 200 1.7E-52 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 20 87 1.7E-52 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.30.30 88 127 5.5E-10 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF53067 20 196 2.2E-49 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 4.8E-272 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 314 356 9.8E-32 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.30.420.40 201 238 9.8E-32 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PANTHER PTHR19375 19 606 0.0 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Pfam PF00012 Hsp70 protein 22 600 8.7E-205 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:1.20.1270.10 529 615 1.4E-33 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PANTHER PTHR19375:SF176 19 606 0.0 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.738 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:2.60.34.10 387 528 6.2E-55 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF100934 504 615 3.92E-37 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 Gene3D G3DSA:3.90.640.10 239 310 1.0E-10 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 SUPERFAMILY SSF53067 200 377 2.8E-53 T 22-04-2016 APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS14330 d2746a20c66cfb1cdc9c1eb5b8feda3c 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.9E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 PANTHER PTHR11732:SF150 237 323 2.1E-142 T 22-04-2016 APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 PANTHER PTHR11732:SF150 1 217 2.1E-142 T 22-04-2016 APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 Pfam PF00248 Aldo/keto reductase family 15 312 4.6E-75 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 PANTHER PTHR11732 237 323 2.1E-142 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 PANTHER PTHR11732 1 217 2.1E-142 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 Gene3D G3DSA:3.20.20.100 9 322 1.2E-106 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 SUPERFAMILY SSF51430 1 321 4.71E-103 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 PRINTS PR00069 Aldo-keto reductase signature 47 71 5.3E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 PRINTS PR00069 Aldo-keto reductase signature 142 159 5.3E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 PRINTS PR00069 Aldo-keto reductase signature 111 129 5.3E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS02130 a11c884327d4b72e43aa32cc0f0c4ef6 324 PRINTS PR00069 Aldo-keto reductase signature 230 254 5.3E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS05850 0ad1796c90778c9ece5b8a17936c48b9 217 SUPERFAMILY SSF51306 118 212 9.07E-30 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APECO1_RS05850 0ad1796c90778c9ece5b8a17936c48b9 217 PANTHER PTHR33516:SF3 10 216 2.2E-33 T 22-04-2016 APECO1_RS05850 0ad1796c90778c9ece5b8a17936c48b9 217 SUPERFAMILY SSF47413 5 75 7.24E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS05850 0ad1796c90778c9ece5b8a17936c48b9 217 SMART SM00530 6 61 8.6E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS05850 0ad1796c90778c9ece5b8a17936c48b9 217 PANTHER PTHR33516 10 216 2.2E-33 T 22-04-2016 APECO1_RS05850 0ad1796c90778c9ece5b8a17936c48b9 217 Gene3D G3DSA:1.10.260.40 7 57 2.9E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS05850 0ad1796c90778c9ece5b8a17936c48b9 217 Gene3D G3DSA:2.10.109.10 118 212 3.4E-36 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APECO1_RS05850 0ad1796c90778c9ece5b8a17936c48b9 217 Pfam PF01381 Helix-turn-helix 9 56 1.9E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS05850 0ad1796c90778c9ece5b8a17936c48b9 217 Pfam PF00717 Peptidase S24-like 125 198 3.7E-17 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 PANTHER PTHR11946 282 928 0.0 T 22-04-2016 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 PANTHER PTHR11946 6 259 0.0 T 22-04-2016 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 SUPERFAMILY SSF50677 204 403 6.15E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 PANTHER PTHR11946:SF11 282 928 0.0 T 22-04-2016 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 PANTHER PTHR11946:SF11 6 259 0.0 T 22-04-2016 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 5.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 5.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 5.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 5.6E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 SUPERFAMILY SSF47323 652 929 1.05E-79 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 Gene3D G3DSA:1.10.730.10 641 827 2.9E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 2.2E-9 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 2.7E-27 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 Gene3D G3DSA:3.90.740.10 206 389 1.1E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 Gene3D G3DSA:3.40.50.620 17 205 1.1E-134 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 Gene3D G3DSA:3.40.50.620 403 636 1.1E-134 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 641 2.8E-241 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 0.0 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 SUPERFAMILY SSF52374 403 648 7.1E-137 T 22-04-2016 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 SUPERFAMILY SSF52374 3 202 7.1E-137 T 22-04-2016 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.585 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 APECO1_RS00130 f4eebb6f250fbd50a9dda535508a4da3 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS23510 6815a15f7a09d2fe8a1a2fb72f14f70c 147 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 138 1.7E-6 T 22-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase APECO1_RS23510 6815a15f7a09d2fe8a1a2fb72f14f70c 147 SUPERFAMILY SSF54593 2 139 3.68E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APECO1_RS23510 6815a15f7a09d2fe8a1a2fb72f14f70c 147 PANTHER PTHR33990 1 143 1.4E-49 T 22-04-2016 APECO1_RS23510 6815a15f7a09d2fe8a1a2fb72f14f70c 147 Gene3D G3DSA:3.10.180.10 7 143 2.5E-40 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APECO1_RS23510 6815a15f7a09d2fe8a1a2fb72f14f70c 147 PANTHER PTHR33990:SF1 1 143 1.4E-49 T 22-04-2016 APECO1_RS08675 e7b2eeefe81c608c36cdda3ae01625d8 457 PANTHER PTHR11328:SF35 3 446 1.0E-289 T 22-04-2016 APECO1_RS08675 e7b2eeefe81c608c36cdda3ae01625d8 457 PANTHER PTHR11328 3 446 1.0E-289 T 22-04-2016 APECO1_RS08675 e7b2eeefe81c608c36cdda3ae01625d8 457 Gene3D G3DSA:1.20.1250.20 226 433 2.7E-16 T 22-04-2016 APECO1_RS08675 e7b2eeefe81c608c36cdda3ae01625d8 457 Gene3D G3DSA:1.20.1250.20 9 205 3.1E-10 T 22-04-2016 APECO1_RS08675 e7b2eeefe81c608c36cdda3ae01625d8 457 Pfam PF13347 MFS/sugar transport protein 12 431 1.8E-93 T 22-04-2016 APECO1_RS08675 e7b2eeefe81c608c36cdda3ae01625d8 457 SUPERFAMILY SSF103473 1 433 2.22E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS08675 e7b2eeefe81c608c36cdda3ae01625d8 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 7.7E-150 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APECO1_RS08675 e7b2eeefe81c608c36cdda3ae01625d8 457 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 86 - T 22-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 SMART SM00382 30 230 6.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 PANTHER PTHR24220 128 254 6.6E-129 T 22-04-2016 APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 PANTHER PTHR24220 7 112 6.6E-129 T 22-04-2016 APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 2.1E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 Gene3D G3DSA:3.40.50.300 2 251 4.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 Pfam PF00005 ABC transporter 21 181 3.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 SUPERFAMILY SSF52540 4 253 6.48E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 PANTHER PTHR24220:SF358 128 254 6.6E-129 T 22-04-2016 APECO1_RS19770 5ae0816c961f60a72196781e72d7205e 255 PANTHER PTHR24220:SF358 7 112 6.6E-129 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 PANTHER PTHR24093 9 587 0.0 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 PANTHER PTHR24093 625 678 0.0 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.389 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 Gene3D G3DSA:2.70.150.10 50 208 4.5E-22 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 Pfam PF00122 E1-E2 ATPase 72 296 3.4E-40 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 677 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 2.1E-38 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 SUPERFAMILY SSF81660 316 450 5.23E-38 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 Gene3D G3DSA:3.40.1110.10 316 443 1.0E-55 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 604 2.4E-49 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 332 4.1E-37 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 SUPERFAMILY SSF81665 619 661 2.62E-12 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 SUPERFAMILY SSF81665 30 103 2.62E-12 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 SUPERFAMILY SSF81665 208 299 2.62E-12 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 SUPERFAMILY SSF81653 120 207 9.02E-20 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 PANTHER PTHR24093:SF49 9 587 0.0 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 PANTHER PTHR24093:SF49 625 678 0.0 T 22-04-2016 APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 SUPERFAMILY SSF56784 293 317 5.95E-39 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 SUPERFAMILY SSF56784 377 404 5.95E-39 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 SUPERFAMILY SSF56784 435 559 5.95E-39 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03390 e8ccb7000afc6558a13660857d8adb26 682 Gene3D G3DSA:3.40.50.1000 444 563 3.9E-35 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS23345 869098856c3ad00092e0d556cd6d7ef5 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 6 53 2.0E-12 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APECO1_RS23345 869098856c3ad00092e0d556cd6d7ef5 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 274 4.9E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23345 869098856c3ad00092e0d556cd6d7ef5 277 PANTHER PTHR30465:SF10 6 275 2.2E-101 T 22-04-2016 APECO1_RS23345 869098856c3ad00092e0d556cd6d7ef5 277 PANTHER PTHR30465 6 275 2.2E-101 T 22-04-2016 APECO1_RS23345 869098856c3ad00092e0d556cd6d7ef5 277 SUPERFAMILY SSF161098 72 258 7.85E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23345 869098856c3ad00092e0d556cd6d7ef5 277 Gene3D G3DSA:1.10.3720.10 73 273 1.6E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS22455 779729355b39f0a9064b8cd257dc0f03 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.7E-59 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 APECO1_RS22455 779729355b39f0a9064b8cd257dc0f03 105 Gene3D G3DSA:1.10.140.10 2 105 3.0E-65 T 22-04-2016 IPR023453 Methionine repressor MetJ domain APECO1_RS22455 779729355b39f0a9064b8cd257dc0f03 105 SUPERFAMILY SSF47598 2 105 2.45E-58 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APECO1_RS22455 779729355b39f0a9064b8cd257dc0f03 105 Hamap MF_00744 Met repressor [metJ]. 1 105 42.783 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 APECO1_RS22455 779729355b39f0a9064b8cd257dc0f03 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 8.2E-183 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 PANTHER PTHR22939 9 352 3.4E-178 T 22-04-2016 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 Pfam PF13365 Trypsin-like peptidase domain 80 215 1.7E-28 T 22-04-2016 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 Pfam PF13180 PDZ domain 279 347 4.4E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 SUPERFAMILY SSF50156 256 352 1.97E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 2.4E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 2.4E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 2.4E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 2.4E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 2.4E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 2.4E-47 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 Gene3D G3DSA:2.40.10.10 148 258 1.7E-38 T 22-04-2016 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 PANTHER PTHR22939:SF93 9 352 3.4E-178 T 22-04-2016 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 SMART SM00228 257 339 2.2E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 Gene3D G3DSA:2.40.10.10 34 138 1.9E-31 T 22-04-2016 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 Gene3D G3DSA:2.30.42.10 259 353 1.9E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS18585 d93ed33f63ae8ebec2b3f08782629cbc 355 SUPERFAMILY SSF50494 47 254 1.68E-60 T 22-04-2016 IPR009003 Peptidase S1, PA clan APECO1_RS09490 730ca7c6bf3955d6e8c267a7ce3a3dd9 326 SUPERFAMILY SSF51430 1 320 2.75E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS09490 730ca7c6bf3955d6e8c267a7ce3a3dd9 326 Gene3D G3DSA:3.20.20.100 1 321 4.3E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS09490 730ca7c6bf3955d6e8c267a7ce3a3dd9 326 PRINTS PR00069 Aldo-keto reductase signature 188 217 5.0E-9 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS09490 730ca7c6bf3955d6e8c267a7ce3a3dd9 326 PRINTS PR00069 Aldo-keto reductase signature 154 171 5.0E-9 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS09490 730ca7c6bf3955d6e8c267a7ce3a3dd9 326 PRINTS PR00069 Aldo-keto reductase signature 120 138 5.0E-9 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS09490 730ca7c6bf3955d6e8c267a7ce3a3dd9 326 Pfam PF00248 Aldo/keto reductase family 15 320 1.2E-64 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS09490 730ca7c6bf3955d6e8c267a7ce3a3dd9 326 PANTHER PTHR11732 1 326 3.7E-107 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS00395 ec594552cfa3990942f3b1fb09b5584c 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 189 5.9E-104 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00395 ec594552cfa3990942f3b1fb09b5584c 201 PANTHER PTHR11670:SF27 1 201 9.2E-122 T 22-04-2016 APECO1_RS00395 ec594552cfa3990942f3b1fb09b5584c 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 44.705 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00395 ec594552cfa3990942f3b1fb09b5584c 201 Gene3D G3DSA:3.20.19.10 6 196 1.9E-48 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS00395 ec594552cfa3990942f3b1fb09b5584c 201 SUPERFAMILY SSF52016 4 193 1.24E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS00395 ec594552cfa3990942f3b1fb09b5584c 201 Pfam PF00694 Aconitase C-terminal domain 3 126 5.1E-40 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00395 ec594552cfa3990942f3b1fb09b5584c 201 PANTHER PTHR11670 1 201 9.2E-122 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS15060 9217b8440a2da9cd038dae22c89cd656 162 Pfam PF06069 PerC transcriptional activator 98 149 8.9E-9 T 22-04-2016 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 APECO1_RS15060 9217b8440a2da9cd038dae22c89cd656 162 SUPERFAMILY SSF46785 14 103 7.4E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15060 9217b8440a2da9cd038dae22c89cd656 162 ProDom PD096295 YFDN SB43 ORF40 1 162 5.0E-91 T 22-04-2016 IPR020344 Bacteriophage SfV, Orf40 APECO1_RS22175 e0597917e9d119cfd9f41705c45f3e94 145 PANTHER PTHR10472 2 144 9.8E-78 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APECO1_RS22175 e0597917e9d119cfd9f41705c45f3e94 145 Gene3D G3DSA:3.50.80.10 1 144 1.8E-57 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APECO1_RS22175 e0597917e9d119cfd9f41705c45f3e94 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.4E-77 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APECO1_RS22175 e0597917e9d119cfd9f41705c45f3e94 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 7.6E-54 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APECO1_RS22175 e0597917e9d119cfd9f41705c45f3e94 145 SUPERFAMILY SSF69500 1 144 4.05E-57 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APECO1_RS22175 e0597917e9d119cfd9f41705c45f3e94 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.328 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 SUPERFAMILY SSF48334 270 566 1.57E-90 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Gene3D G3DSA:3.30.420.110 129 258 5.7E-43 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 SUPERFAMILY SSF55271 6 116 4.05E-43 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 PANTHER PTHR11361:SF86 1 852 0.0 T 22-04-2016 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Pfam PF00488 MutS domain V 610 797 3.4E-88 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 PANTHER PTHR11361 1 852 0.0 T 22-04-2016 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 SMART SM00533 286 591 1.7E-111 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 SUPERFAMILY SSF52540 567 798 7.99E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Gene3D G3DSA:3.40.50.300 567 797 1.6E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.472 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Pfam PF01624 MutS domain I 11 122 4.0E-43 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 SMART SM00534 607 794 2.5E-123 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Gene3D G3DSA:3.40.1170.10 5 123 2.5E-52 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 SUPERFAMILY SSF53150 117 269 1.57E-42 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Pfam PF05190 MutS family domain IV 428 517 1.5E-28 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Pfam PF05188 MutS domain II 131 256 5.3E-33 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Gene3D G3DSA:1.10.1420.10 319 477 2.6E-56 T 22-04-2016 APECO1_RS15550 ca5240c9545ecd581e9e0898c5c02e54 853 Pfam PF05192 MutS domain III 272 559 2.4E-41 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 217 231 2.2E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 88 104 2.2E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 271 284 2.2E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 Pfam PF00145 C-5 cytosine-specific DNA methylase 87 448 3.0E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 Gene3D G3DSA:3.90.120.10 310 438 4.3E-29 T 22-04-2016 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 169 181 - T 22-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 SUPERFAMILY SSF53335 87 450 9.28E-80 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 89 450 3.0E-105 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 PANTHER PTHR10629 1 471 4.4E-123 T 22-04-2016 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 432 450 - T 22-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 PANTHER PTHR10629:SF31 1 471 4.4E-123 T 22-04-2016 APECO1_RS10455 c5c7bf73da4fb33e5b907a904d3a7596 472 Gene3D G3DSA:3.40.50.150 87 309 5.9E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:1.10.560.10 3 188 1.4E-47 T 22-04-2016 IPR027413 GroEL-like equatorial domain APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:1.10.560.10 369 518 3.8E-40 T 22-04-2016 IPR027413 GroEL-like equatorial domain APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF52029 185 376 3.14E-83 T 22-04-2016 IPR027409 GroEL-like apical domain APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 Gene3D G3DSA:3.50.7.10 189 368 6.0E-99 T 22-04-2016 IPR027409 GroEL-like apical domain APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.2E-257 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF48592 406 521 5.88E-78 T 22-04-2016 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF48592 7 134 5.88E-78 T 22-04-2016 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.2E-94 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 PANTHER PTHR11353 2 548 8.3E-257 T 22-04-2016 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.614 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 SUPERFAMILY SSF54849 137 203 1.42E-24 T 22-04-2016 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APECO1_RS24110 6279ec3722197af3533a9fd2b8d54074 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Gene3D G3DSA:3.40.50.620 4 205 9.5E-90 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PANTHER PTHR10055 2 334 4.4E-190 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 SUPERFAMILY SSF52374 5 330 2.85E-98 T 22-04-2016 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PANTHER PTHR10055:SF10 2 334 4.4E-190 T 22-04-2016 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.643 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 6.7E-118 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.1E-30 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 3.1E-30 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 3.1E-30 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.1E-30 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Gene3D G3DSA:1.10.240.10 206 324 1.3E-20 T 22-04-2016 APECO1_RS19375 5ebf9cdd515d4bce1b508a0ed5b4621c 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 7.7E-90 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 PANTHER PTHR11707:SF29 23 347 4.0E-105 T 22-04-2016 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 SUPERFAMILY SSF53774 23 347 2.09E-109 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 3.0E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 3.0E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 3.0E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 SMART SM00870 25 342 1.0E-146 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 PIRSF PIRSF500176 22 348 3.8E-82 T 22-04-2016 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 Gene3D G3DSA:3.40.50.40 235 346 3.8E-41 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 Pfam PF00710 Asparaginase, N-terminal 25 216 2.0E-63 T 22-04-2016 IPR027474 L-asparaginase, N-terminal APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 1 348 4.5E-170 T 22-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 PIRSF PIRSF001220 20 348 1.6E-93 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 Gene3D G3DSA:3.40.50.1170 23 231 3.0E-76 T 22-04-2016 IPR027474 L-asparaginase, N-terminal APECO1_RS16750 7a3ab67639f9b3dfa1c1370eff48389a 348 PANTHER PTHR11707 23 347 4.0E-105 T 22-04-2016 APECO1_RS06465 fe605bdbb312f519019a338835a00d18 464 Pfam PF11924 Invasin beta-domain of outer membrane 64 341 2.7E-100 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane APECO1_RS06465 fe605bdbb312f519019a338835a00d18 464 PANTHER PTHR39576 1 464 0.0 T 22-04-2016 APECO1_RS06465 fe605bdbb312f519019a338835a00d18 464 PANTHER PTHR39576:SF1 1 464 0.0 T 22-04-2016 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 Gene3D G3DSA:1.10.230.10 281 373 3.7E-43 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 Gene3D G3DSA:1.10.580.10 52 280 2.1E-95 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 PIRSF PIRSF001369 38 427 2.8E-177 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 165 178 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 241 269 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 296 316 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 219 234 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 379 393 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 PRINTS PR00143 Citrate synthase signature 359 375 5.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 PANTHER PTHR11739 39 423 4.1E-205 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 6.7E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 2.8E-244 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 APECO1_RS03460 80831e5897dcdbfa195d6398bb4b3eea 427 SUPERFAMILY SSF48256 9 423 4.97E-168 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 PANTHER PTHR22748 1 268 6.3E-141 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.1E-110 T 22-04-2016 APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 5.1E-29 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 PANTHER PTHR22748:SF7 1 268 6.3E-141 T 22-04-2016 APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 SUPERFAMILY SSF56219 1 267 9.95E-88 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 Gene3D G3DSA:3.60.10.10 1 267 2.0E-87 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS09375 261ace8e2c6052e97f42ea6edc5b5b0f 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 3.3E-94 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Pfam PF08281 Sigma-70, region 4 129 180 4.4E-19 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Gene3D G3DSA:1.10.1740.10 2 108 8.4E-38 T 22-04-2016 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 PANTHER PTHR30173 1 186 1.3E-55 T 22-04-2016 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 3.2E-99 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 6.8E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 PANTHER PTHR30173:SF1 1 186 1.3E-55 T 22-04-2016 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 SUPERFAMILY SSF88946 2 105 5.34E-32 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Gene3D G3DSA:1.10.10.10 122 187 5.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS14545 cbc71f42bfa9d5ba628fd0f044c0b4df 191 Pfam PF04542 Sigma-70 region 2 25 91 4.2E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 Pfam PF00202 Aminotransferase class-III 26 400 2.7E-142 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 Gene3D G3DSA:3.40.640.10 60 289 1.2E-92 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 9.4E-150 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 3.0E-205 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.9 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 Gene3D G3DSA:3.90.1150.10 290 403 5.4E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 PANTHER PTHR11986 1 404 5.1E-214 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 PANTHER PTHR11986:SF71 1 404 5.1E-214 T 22-04-2016 APECO1_RS19280 d3f590db89fb66c8dd53a78bcc3d9a01 406 SUPERFAMILY SSF53383 20 400 7.75E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.063 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 Gene3D G3DSA:3.30.70.1250 114 235 2.9E-53 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 SUPERFAMILY SSF53649 1 114 1.83E-69 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 SUPERFAMILY SSF53649 236 406 1.83E-69 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 PANTHER PTHR21110 2 407 3.5E-166 T 22-04-2016 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 Pfam PF01676 Metalloenzyme superfamily 2 398 6.6E-47 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 PANTHER PTHR21110:SF0 2 407 3.5E-166 T 22-04-2016 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 PIRSF PIRSF001491 1 407 1.5E-165 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 Gene3D G3DSA:3.40.720.10 240 405 2.1E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 Gene3D G3DSA:3.40.720.10 1 113 2.1E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 1.5E-210 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APECO1_RS25560 3c529bcdd2df1419a607280d7073d02c 407 SUPERFAMILY SSF143856 117 235 2.62E-50 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APECO1_RS15490 7de1c676c06ed253a912160ef4046461 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 194 207 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APECO1_RS15490 7de1c676c06ed253a912160ef4046461 307 PANTHER PTHR11432:SF1 2 307 5.6E-149 T 22-04-2016 APECO1_RS15490 7de1c676c06ed253a912160ef4046461 307 PANTHER PTHR11432 2 307 5.6E-149 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APECO1_RS15490 7de1c676c06ed253a912160ef4046461 307 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 38 53 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APECO1_RS15490 7de1c676c06ed253a912160ef4046461 307 Pfam PF00146 NADH dehydrogenase 9 302 2.3E-49 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APECO1_RS18275 85d82584bc67014d3c63ee6ceabd5751 89 Pfam PF00312 Ribosomal protein S15 9 88 2.2E-38 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18275 85d82584bc67014d3c63ee6ceabd5751 89 SUPERFAMILY SSF47060 3 89 1.71E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APECO1_RS18275 85d82584bc67014d3c63ee6ceabd5751 89 SMART SM01387 8 88 1.8E-52 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18275 85d82584bc67014d3c63ee6ceabd5751 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 5.7E-41 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APECO1_RS18275 85d82584bc67014d3c63ee6ceabd5751 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 6.0E-40 T 22-04-2016 APECO1_RS18275 85d82584bc67014d3c63ee6ceabd5751 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.443 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APECO1_RS18275 85d82584bc67014d3c63ee6ceabd5751 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18275 85d82584bc67014d3c63ee6ceabd5751 89 PANTHER PTHR23321 1 89 5.1E-49 T 22-04-2016 APECO1_RS18275 85d82584bc67014d3c63ee6ceabd5751 89 Gene3D G3DSA:1.10.287.10 3 89 1.0E-39 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 210 3.2E-7 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 5.7E-6 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 5.7E-6 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 5.7E-6 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 Gene3D G3DSA:3.10.20.30 226 321 5.6E-26 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 Gene3D G3DSA:2.40.30.10 10 105 2.6E-18 T 22-04-2016 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 SUPERFAMILY SSF52343 95 220 5.89E-25 T 22-04-2016 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 248 315 4.7E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 PANTHER PTHR19370:SF89 8 247 2.3E-133 T 22-04-2016 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 Pfam PF00970 Oxidoreductase FAD-binding domain 17 104 3.9E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 PANTHER PTHR19370 8 247 2.3E-133 T 22-04-2016 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 SUPERFAMILY SSF63380 9 105 3.11E-21 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 SUPERFAMILY SSF54292 221 321 1.97E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS04245 91c1374849e3d2ac28e1cb9f5a28891f 322 Gene3D G3DSA:3.40.50.80 106 225 5.2E-23 T 22-04-2016 APECO1_RS13905 33d2782f808a2de18f9552f2ad220a60 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS13905 33d2782f808a2de18f9552f2ad220a60 429 PANTHER PTHR11119 1 407 6.4E-178 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS13905 33d2782f808a2de18f9552f2ad220a60 429 Pfam PF00860 Permease family 16 382 1.4E-108 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS13905 33d2782f808a2de18f9552f2ad220a60 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 9.3E-132 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS13905 33d2782f808a2de18f9552f2ad220a60 429 PANTHER PTHR11119:SF49 1 407 6.4E-178 T 22-04-2016 APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 SMART SM00065 218 365 4.9E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 Pfam PF13492 GAF domain 243 355 3.2E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 SUPERFAMILY SSF55874 424 556 2.88E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 Pfam PF07694 5TMR of 5TMR-LYT 28 196 8.3E-57 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 PANTHER PTHR34220:SF3 1 561 0.0 T 22-04-2016 APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 Gene3D G3DSA:3.30.565.10 422 559 1.1E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 SUPERFAMILY SSF55781 243 359 5.23E-8 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 Pfam PF06580 Histidine kinase 371 448 1.5E-25 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 PANTHER PTHR34220 1 561 0.0 T 22-04-2016 APECO1_RS11895 42f56e489167f808d0238f10719f137e 561 Gene3D G3DSA:3.30.450.40 244 363 3.6E-4 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 4.8E-28 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 4.8E-28 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 4.8E-28 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 4.8E-28 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 SUPERFAMILY SSF48557 2 458 4.71E-147 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 Pfam PF00206 Lyase 13 345 1.3E-117 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 1.4E-5 T 22-04-2016 APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 1.4E-5 T 22-04-2016 APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 1.4E-5 T 22-04-2016 APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 PANTHER PTHR11444:SF25 1 477 0.0 T 22-04-2016 APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 Gene3D G3DSA:1.20.200.10 143 405 6.8E-91 T 22-04-2016 APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 Gene3D G3DSA:1.10.275.10 4 142 3.0E-57 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 2.0E-276 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 Gene3D G3DSA:1.10.40.30 411 462 5.9E-19 T 22-04-2016 APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 PANTHER PTHR11444 1 477 0.0 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS24090 450d855a66b57220e455c3824dd9226b 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.1E-17 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS17705 265d0972bd15046d7555cfda792abe62 257 PANTHER PTHR11040:SF56 5 254 2.7E-76 T 22-04-2016 APECO1_RS17705 265d0972bd15046d7555cfda792abe62 257 PANTHER PTHR11040 5 254 2.7E-76 T 22-04-2016 APECO1_RS17705 265d0972bd15046d7555cfda792abe62 257 Hamap MF_00548 Zinc transporter ZupT [zupT]. 1 252 30.594 T 22-04-2016 IPR023498 Zinc transporter ZupT APECO1_RS17705 265d0972bd15046d7555cfda792abe62 257 Pfam PF02535 ZIP Zinc transporter 6 91 1.1E-7 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APECO1_RS17705 265d0972bd15046d7555cfda792abe62 257 Pfam PF02535 ZIP Zinc transporter 98 246 2.0E-25 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APECO1_RS18810 3cf94506451aa7825e16153905e8c559 341 Gene3D G3DSA:3.40.190.10 33 127 1.9E-19 T 22-04-2016 APECO1_RS18810 3cf94506451aa7825e16153905e8c559 341 Gene3D G3DSA:3.40.190.10 225 251 1.9E-19 T 22-04-2016 APECO1_RS18810 3cf94506451aa7825e16153905e8c559 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 253 2.0E-32 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS18810 3cf94506451aa7825e16153905e8c559 341 SMART SM00062 36 265 2.1E-61 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS18810 3cf94506451aa7825e16153905e8c559 341 PANTHER PTHR30085:SF5 1 310 1.4E-193 T 22-04-2016 APECO1_RS18810 3cf94506451aa7825e16153905e8c559 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APECO1_RS18810 3cf94506451aa7825e16153905e8c559 341 PANTHER PTHR30085 1 310 1.4E-193 T 22-04-2016 APECO1_RS18810 3cf94506451aa7825e16153905e8c559 341 SUPERFAMILY SSF53850 27 256 7.61E-49 T 22-04-2016 APECO1_RS18810 3cf94506451aa7825e16153905e8c559 341 Gene3D G3DSA:3.40.190.10 128 224 7.5E-16 T 22-04-2016 APECO1_RS06875 7dfd4b7daeabc2af71bba133876788c0 131 SUPERFAMILY SSF143749 2 130 3.4E-51 T 22-04-2016 IPR009312 Minor tail protein U-like APECO1_RS06875 7dfd4b7daeabc2af71bba133876788c0 131 Pfam PF06141 Phage minor tail protein U 1 129 1.0E-48 T 22-04-2016 IPR009312 Minor tail protein U-like APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 7.4E-115 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 PANTHER PTHR26402:SF578 1 218 6.7E-101 T 22-04-2016 APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 SUPERFAMILY SSF46894 118 219 3.68E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 Gene3D G3DSA:1.10.10.10 123 219 7.8E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 SMART SM00448 1 111 1.6E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 SMART SM00862 143 218 7.8E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 Pfam PF00072 Response regulator receiver domain 3 112 1.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 PANTHER PTHR26402 1 218 6.7E-101 T 22-04-2016 APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 Gene3D G3DSA:3.40.50.2300 1 120 1.0E-38 T 22-04-2016 APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 SUPERFAMILY SSF52172 1 124 3.84E-39 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS10495 eb758feacb2f3934a197a8343e4b32eb 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 2.0E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 SUPERFAMILY SSF52540 159 545 2.59E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.0E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 SUPERFAMILY SSF52540 546 853 1.08E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 SMART SM00382 597 752 2.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 SMART SM00382 198 343 5.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Gene3D G3DSA:3.40.50.300 160 341 2.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Gene3D G3DSA:1.10.8.60 778 855 5.4E-31 T 22-04-2016 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 SUPERFAMILY SSF81923 4 156 1.29E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Gene3D G3DSA:1.10.1780.10 1 147 2.7E-48 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Gene3D G3DSA:3.40.50.300 551 777 8.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 PANTHER PTHR11638 1 856 0.0 T 22-04-2016 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 PANTHER PTHR11638:SF18 1 856 0.0 T 22-04-2016 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 1.3E-55 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Gene3D G3DSA:1.10.8.60 343 427 5.3E-37 T 22-04-2016 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 SMART SM01086 766 855 4.5E-37 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 8.7E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 8.6E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 APECO1_RS14695 eba03936b7c0d626961bce6b8a7fb12d 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.0E-28 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS02170 ac89ad18418130e60596c3eea09926e2 454 PANTHER PTHR23510:SF6 1 400 1.8E-275 T 22-04-2016 APECO1_RS02170 ac89ad18418130e60596c3eea09926e2 454 PANTHER PTHR23510 1 400 1.8E-275 T 22-04-2016 APECO1_RS02170 ac89ad18418130e60596c3eea09926e2 454 Gene3D G3DSA:1.20.1250.20 11 193 3.5E-34 T 22-04-2016 APECO1_RS02170 ac89ad18418130e60596c3eea09926e2 454 Gene3D G3DSA:1.20.1250.20 212 392 2.9E-19 T 22-04-2016 APECO1_RS02170 ac89ad18418130e60596c3eea09926e2 454 Pfam PF07690 Major Facilitator Superfamily 20 354 5.0E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS02170 ac89ad18418130e60596c3eea09926e2 454 SUPERFAMILY SSF103473 6 391 6.54E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 SUPERFAMILY SSF54373 226 319 2.16E-6 T 22-04-2016 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 Pfam PF01266 FAD dependent oxidoreductase 5 323 3.8E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 SUPERFAMILY SSF51905 312 375 1.17E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 SUPERFAMILY SSF51905 1 260 1.17E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 Gene3D G3DSA:3.50.50.60 2 262 5.0E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 PANTHER PTHR11985 5 497 1.4E-199 T 22-04-2016 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 495 2.5E-12 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS19585 d95148e4a60aeb28d2ad7fb645d154f2 501 PANTHER PTHR11985:SF1 5 497 1.4E-199 T 22-04-2016 APECO1_RS15785 f5ff2a881cd7a62f7e25e57fee6e00db 111 PANTHER PTHR33988:SF3 2 111 4.7E-49 T 22-04-2016 APECO1_RS15785 f5ff2a881cd7a62f7e25e57fee6e00db 111 SUPERFAMILY SSF50118 4 111 2.62E-33 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APECO1_RS15785 f5ff2a881cd7a62f7e25e57fee6e00db 111 Gene3D G3DSA:2.30.30.110 4 110 7.7E-37 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APECO1_RS15785 f5ff2a881cd7a62f7e25e57fee6e00db 111 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 10 109 2.0E-22 T 22-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 APECO1_RS15785 f5ff2a881cd7a62f7e25e57fee6e00db 111 PANTHER PTHR33988 2 111 4.7E-49 T 22-04-2016 APECO1_RS11170 cde4763fcefe996b6c1cff110f9aa96b 109 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 25.713 T 22-04-2016 IPR007458 Protein of unknown function DUF496 APECO1_RS11170 cde4763fcefe996b6c1cff110f9aa96b 109 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 98 2.0E-43 T 22-04-2016 IPR007458 Protein of unknown function DUF496 APECO1_RS11170 cde4763fcefe996b6c1cff110f9aa96b 109 PIRSF PIRSF028773 1 109 7.0E-54 T 22-04-2016 IPR007458 Protein of unknown function DUF496 APECO1_RS11170 cde4763fcefe996b6c1cff110f9aa96b 109 PANTHER PTHR39591 1 109 1.4E-61 T 22-04-2016 APECO1_RS11170 cde4763fcefe996b6c1cff110f9aa96b 109 Pfam PF04363 Protein of unknown function (DUF496) 8 99 3.0E-46 T 22-04-2016 IPR007458 Protein of unknown function DUF496 APECO1_RS18410 2b27d7ab57aa001fdcaa89851f037d27 211 PANTHER PTHR36573 1 211 1.3E-81 T 22-04-2016 APECO1_RS18410 2b27d7ab57aa001fdcaa89851f037d27 211 Gene3D G3DSA:1.10.10.640 71 111 1.1E-21 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APECO1_RS18410 2b27d7ab57aa001fdcaa89851f037d27 211 Gene3D G3DSA:1.10.10.640 173 203 1.1E-21 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APECO1_RS18410 2b27d7ab57aa001fdcaa89851f037d27 211 Pfam PF05494 MlaC protein 33 198 5.0E-53 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APECO1_RS18410 2b27d7ab57aa001fdcaa89851f037d27 211 Gene3D G3DSA:3.10.450.50 114 172 3.8E-17 T 22-04-2016 IPR032710 NTF2-like domain APECO1_RS18410 2b27d7ab57aa001fdcaa89851f037d27 211 Gene3D G3DSA:3.10.450.50 26 70 3.8E-17 T 22-04-2016 IPR032710 NTF2-like domain APECO1_RS18410 2b27d7ab57aa001fdcaa89851f037d27 211 PIRSF PIRSF004649 1 211 2.4E-63 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APECO1_RS02255 fe4a7d96e18dc979c368d035e3e9f83f 132 Pfam PF13279 Thioesterase-like superfamily 11 118 1.4E-15 T 22-04-2016 APECO1_RS02255 fe4a7d96e18dc979c368d035e3e9f83f 132 PANTHER PTHR31793:SF8 1 132 1.4E-99 T 22-04-2016 APECO1_RS02255 fe4a7d96e18dc979c368d035e3e9f83f 132 PANTHER PTHR31793 1 132 1.4E-99 T 22-04-2016 APECO1_RS02255 fe4a7d96e18dc979c368d035e3e9f83f 132 PIRSF PIRSF003230 1 132 7.4E-21 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APECO1_RS02255 fe4a7d96e18dc979c368d035e3e9f83f 132 Gene3D G3DSA:3.10.129.10 2 131 9.0E-44 T 22-04-2016 IPR029069 HotDog domain APECO1_RS02255 fe4a7d96e18dc979c368d035e3e9f83f 132 SUPERFAMILY SSF54637 3 129 1.21E-37 T 22-04-2016 IPR029069 HotDog domain APECO1_RS02255 fe4a7d96e18dc979c368d035e3e9f83f 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 119 2.3E-36 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 Gene3D G3DSA:2.60.410.10 283 373 9.6E-27 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 262 2.7E-99 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 SMART SM00936 282 373 1.6E-26 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 Gene3D G3DSA:3.40.710.10 28 282 9.1E-95 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 SUPERFAMILY SSF56601 4 282 1.84E-76 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 SUPERFAMILY SSF69189 282 375 1.28E-21 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.8E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.8E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.8E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 PANTHER PTHR21581 1 387 0.0 T 22-04-2016 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 2.0E-20 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS11185 952ba8bae94c9324a574530207a82307 388 PANTHER PTHR21581:SF5 1 387 0.0 T 22-04-2016 APECO1_RS06965 b308a03bf2764109d546f55875343e08 166 Gene3D G3DSA:1.20.1260.10 1 165 5.3E-65 T 22-04-2016 IPR012347 Ferritin-related APECO1_RS06965 b308a03bf2764109d546f55875343e08 166 Pfam PF05974 Domain of unknown function (DUF892) 5 163 5.0E-53 T 22-04-2016 IPR010287 Domain of unknown function DUF892 APECO1_RS06965 b308a03bf2764109d546f55875343e08 166 PANTHER PTHR30565 1 166 1.0E-75 T 22-04-2016 APECO1_RS06965 b308a03bf2764109d546f55875343e08 166 SUPERFAMILY SSF47240 1 154 6.49E-49 T 22-04-2016 IPR009078 Ferritin-like superfamily APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 PANTHER PTHR23117 1 204 3.8E-109 T 22-04-2016 APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.40.50.300 18 43 3.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.554 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 SMART SM00072 3 187 3.6E-89 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 SUPERFAMILY SSF52540 3 189 4.01E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 PANTHER PTHR23117:SF13 1 204 3.8E-109 T 22-04-2016 APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 Pfam PF00625 Guanylate kinase 5 186 1.2E-71 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 9.6E-77 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.40.50.300 1 17 2.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.40.50.300 88 204 2.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20835 00a2e230767a7aebb667ea11577dad4b 207 Gene3D G3DSA:3.30.63.10 44 87 1.7E-30 T 22-04-2016 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.374 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 SUPERFAMILY SSF52440 1 127 2.73E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Pfam PF02142 MGS-like domain 957 1041 3.1E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Gene3D G3DSA:3.30.1490.20 141 199 2.3E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Gene3D G3DSA:3.30.470.20 746 933 1.1E-81 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Gene3D G3DSA:3.30.470.20 200 399 8.5E-76 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 PANTHER PTHR11405:SF5 1 1073 0.0 T 22-04-2016 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Gene3D G3DSA:3.30.1490.20 687 745 2.5E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.3E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.3E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-63 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 SUPERFAMILY SSF56059 128 401 4.24E-110 T 22-04-2016 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Gene3D G3DSA:1.10.1030.10 400 538 5.5E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 8.4E-40 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 SMART SM00851 956 1042 7.0E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 PANTHER PTHR11405 1 1073 0.0 T 22-04-2016 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 SUPERFAMILY SSF52440 557 676 9.93E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.202 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Gene3D G3DSA:3.40.50.20 539 663 2.8E-62 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 SMART SM01096 424 547 4.7E-72 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Gene3D G3DSA:3.40.50.20 3 108 1.4E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Gene3D G3DSA:3.40.50.1380 939 1072 2.9E-39 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.7E-77 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 1.1E-38 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 SUPERFAMILY SSF56059 674 934 8.66E-105 T 22-04-2016 APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 SUPERFAMILY SSF52335 938 1071 2.09E-35 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS00180 b951db754bcfcd4e39bd5fac3ac96366 1073 SUPERFAMILY SSF48108 396 554 3.53E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS02455 e6a5194f8550099d92331289e39f2028 159 PANTHER PTHR30411 1 158 2.9E-76 T 22-04-2016 APECO1_RS02455 e6a5194f8550099d92331289e39f2028 159 SUPERFAMILY SSF55826 2 155 9.03E-46 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APECO1_RS02455 e6a5194f8550099d92331289e39f2028 159 Gene3D G3DSA:3.90.960.10 1 157 1.5E-62 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APECO1_RS02455 e6a5194f8550099d92331289e39f2028 159 PIRSF PIRSF006181 1 159 1.9E-60 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APECO1_RS02455 e6a5194f8550099d92331289e39f2028 159 PANTHER PTHR30411:SF0 1 158 2.9E-76 T 22-04-2016 APECO1_RS02455 e6a5194f8550099d92331289e39f2028 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 6.3E-58 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APECO1_RS02455 e6a5194f8550099d92331289e39f2028 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 1.9E-23 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 PANTHER PTHR22939 200 450 4.1E-109 T 22-04-2016 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 PANTHER PTHR22939:SF78 200 450 4.1E-109 T 22-04-2016 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 3.7E-184 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 Gene3D G3DSA:2.30.42.10 96 195 1.1E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 SUPERFAMILY SSF50156 196 291 1.24E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 Gene3D G3DSA:2.30.42.10 207 296 1.0E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 209 277 8.1E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 SMART SM00228 115 186 0.11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 SMART SM00228 211 280 8.0E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 SUPERFAMILY SSF50156 86 194 1.58E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00930 5999fecca0b996f77df5fd1f7b39d539 450 Pfam PF02163 Peptidase family M50 11 438 2.0E-89 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 APECO1_RS09710 a26f4541e13f5f48b320c36752d290b1 518 SUPERFAMILY SSF54631 288 422 3.41E-22 T 22-04-2016 APECO1_RS09710 a26f4541e13f5f48b320c36752d290b1 518 Gene3D G3DSA:3.10.580.10 286 426 1.0E-11 T 22-04-2016 APECO1_RS09710 a26f4541e13f5f48b320c36752d290b1 518 Pfam PF03741 Integral membrane protein TerC family 14 203 8.9E-49 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APECO1_RS09710 a26f4541e13f5f48b320c36752d290b1 518 Pfam PF03471 Transporter associated domain 434 509 2.6E-17 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS09710 a26f4541e13f5f48b320c36752d290b1 518 Gene3D G3DSA:3.30.465.10 427 517 8.6E-21 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS09710 a26f4541e13f5f48b320c36752d290b1 518 SUPERFAMILY SSF56176 432 517 3.82E-18 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS09710 a26f4541e13f5f48b320c36752d290b1 518 PANTHER PTHR22777:SF15 1 518 0.0 T 22-04-2016 APECO1_RS09710 a26f4541e13f5f48b320c36752d290b1 518 SMART SM01091 431 511 3.5E-21 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS09710 a26f4541e13f5f48b320c36752d290b1 518 PANTHER PTHR22777 1 518 0.0 T 22-04-2016 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 8 247 1.5E-108 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 7.8E-53 T 22-04-2016 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 Gene3D G3DSA:3.40.50.720 2 246 4.5E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PANTHER PTHR24322:SF336 10 128 1.3E-106 T 22-04-2016 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PANTHER PTHR24322:SF336 144 176 1.3E-106 T 22-04-2016 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 SUPERFAMILY SSF51735 1 246 3.31E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PANTHER PTHR24322 10 128 1.3E-106 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PANTHER PTHR24322 144 176 1.3E-106 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 94 114 1.8E-67 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 198 217 1.8E-67 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 74 91 1.8E-67 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 12 29 1.8E-67 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 224 243 1.8E-67 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 159 182 1.8E-67 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS02900 cef0e5d68f058961e8a063b2f288ca6d 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 177 4.1E-4 T 22-04-2016 APECO1_RS16295 2732d6fb7c07a9ba59050c8ed0cd7242 159 Gene3D G3DSA:1.10.150.120 80 155 6.8E-26 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APECO1_RS16295 2732d6fb7c07a9ba59050c8ed0cd7242 159 PANTHER PTHR11908:SF66 5 145 1.9E-30 T 22-04-2016 APECO1_RS16295 2732d6fb7c07a9ba59050c8ed0cd7242 159 Gene3D G3DSA:3.10.20.30 7 79 1.8E-24 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS16295 2732d6fb7c07a9ba59050c8ed0cd7242 159 Pfam PF01799 [2Fe-2S] binding domain 78 152 3.1E-23 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APECO1_RS16295 2732d6fb7c07a9ba59050c8ed0cd7242 159 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 64 7.4E-7 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS16295 2732d6fb7c07a9ba59050c8ed0cd7242 159 PANTHER PTHR11908 5 145 1.9E-30 T 22-04-2016 APECO1_RS16295 2732d6fb7c07a9ba59050c8ed0cd7242 159 SUPERFAMILY SSF47741 89 155 1.02E-22 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APECO1_RS16295 2732d6fb7c07a9ba59050c8ed0cd7242 159 SUPERFAMILY SSF54292 8 82 3.15E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 PANTHER PTHR24220 3 384 4.8E-208 T 22-04-2016 APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 Gene3D G3DSA:3.40.50.300 254 467 3.6E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 PANTHER PTHR24220:SF557 3 384 4.8E-208 T 22-04-2016 APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 SMART SM00382 28 219 2.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 SMART SM00382 285 480 2.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 SUPERFAMILY SSF52540 252 479 9.03E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 Gene3D G3DSA:3.40.50.300 10 227 3.5E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 SUPERFAMILY SSF52540 10 225 5.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 Pfam PF00005 ABC transporter 276 429 5.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS03670 383aed0f7c6fb4855e602e41358d2e40 490 Pfam PF00005 ABC transporter 23 163 3.8E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19300 6ed557e63f9430a407a0ba7bc8dff3e8 190 SUPERFAMILY SSF50891 26 189 7.01E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain APECO1_RS19300 6ed557e63f9430a407a0ba7bc8dff3e8 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APECO1_RS19300 6ed557e63f9430a407a0ba7bc8dff3e8 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 3.1E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APECO1_RS19300 6ed557e63f9430a407a0ba7bc8dff3e8 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 3.1E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APECO1_RS19300 6ed557e63f9430a407a0ba7bc8dff3e8 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 3.1E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APECO1_RS19300 6ed557e63f9430a407a0ba7bc8dff3e8 190 PANTHER PTHR11071 32 189 1.1E-69 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APECO1_RS19300 6ed557e63f9430a407a0ba7bc8dff3e8 190 Gene3D G3DSA:2.40.100.10 27 189 3.1E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain APECO1_RS19300 6ed557e63f9430a407a0ba7bc8dff3e8 190 PANTHER PTHR11071:SF265 32 189 1.1E-69 T 22-04-2016 APECO1_RS19300 6ed557e63f9430a407a0ba7bc8dff3e8 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 188 2.3E-50 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 PIRSF PIRSF500210 1 330 4.1E-124 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 Gene3D G3DSA:3.40.190.80 194 327 3.0E-57 T 22-04-2016 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 SUPERFAMILY SSF56655 2 326 1.13E-111 T 22-04-2016 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 Gene3D G3DSA:3.30.540.10 2 192 1.7E-78 T 22-04-2016 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 2.2E-83 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 41.949 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 1.4E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 1.4E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 1.4E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 1.4E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 1.4E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 1.4E-70 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 PIRSF PIRSF000904 1 331 2.2E-120 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APECO1_RS24585 6dce545efd3bad72b609138fd3a8b0fe 332 PANTHER PTHR11556 1 329 1.3E-185 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APECO1_RS24385 fafbd2fd3b195cd952ba25042ba54d8d 216 PANTHER PTHR35039 1 216 1.5E-152 T 22-04-2016 APECO1_RS24385 fafbd2fd3b195cd952ba25042ba54d8d 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 1.1E-30 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24385 fafbd2fd3b195cd952ba25042ba54d8d 216 Gene3D G3DSA:3.20.20.70 2 215 1.4E-80 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS24385 fafbd2fd3b195cd952ba25042ba54d8d 216 SUPERFAMILY SSF51366 2 215 1.89E-40 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS24385 fafbd2fd3b195cd952ba25042ba54d8d 216 Hamap MF_01267 3-keto-L-gulonate-6-phosphate decarboxylase UlaD [ulaD]. 1 216 69.95 T 22-04-2016 IPR023942 3-keto-L-gulonate-6-phosphate decarboxylase, UlaD GO:0000287|GO:0019854|GO:0033982 KEGG: 00040+4.1.1.85|KEGG: 00053+4.1.1.85|MetaCyc: PWY-6961|UniPathway: UPA00263 APECO1_RS24385 fafbd2fd3b195cd952ba25042ba54d8d 216 SMART SM00934 5 207 6.1E-36 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24385 fafbd2fd3b195cd952ba25042ba54d8d 216 PANTHER PTHR35039:SF3 1 216 1.5E-152 T 22-04-2016 APECO1_RS11755 a0ccb2f26cd9d71d6de93819fe473630 334 PANTHER PTHR16222 1 331 1.8E-73 T 22-04-2016 APECO1_RS11755 a0ccb2f26cd9d71d6de93819fe473630 334 Pfam PF03747 ADP-ribosylglycohydrolase 8 302 4.4E-61 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 APECO1_RS11755 a0ccb2f26cd9d71d6de93819fe473630 334 SUPERFAMILY SSF101478 3 326 2.22E-68 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 APECO1_RS11755 a0ccb2f26cd9d71d6de93819fe473630 334 PANTHER PTHR16222:SF12 1 331 1.8E-73 T 22-04-2016 APECO1_RS12785 5551be7b3f2c9d94771c27704b25d181 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 169 9.4E-52 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APECO1_RS12785 5551be7b3f2c9d94771c27704b25d181 183 Gene3D G3DSA:3.60.21.10 1 163 3.1E-49 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS12785 5551be7b3f2c9d94771c27704b25d181 183 PANTHER PTHR11124:SF14 1 163 3.7E-65 T 22-04-2016 APECO1_RS12785 5551be7b3f2c9d94771c27704b25d181 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 6.7E-26 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APECO1_RS12785 5551be7b3f2c9d94771c27704b25d181 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 22-04-2016 IPR020935 Phosphodiesterase YfcE, conserved site KEGG: 00564+3.1.4.-|KEGG: 00565+3.1.4.- APECO1_RS12785 5551be7b3f2c9d94771c27704b25d181 183 SUPERFAMILY SSF56300 1 163 1.31E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS12785 5551be7b3f2c9d94771c27704b25d181 183 PANTHER PTHR11124 1 163 3.7E-65 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APECO1_RS06055 782e717517053bb35e761b147bed622e 190 Pfam PF06805 Bacteriophage lambda tail assembly protein I 1 64 6.2E-25 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I APECO1_RS10550 782e717517053bb35e761b147bed622e 190 Pfam PF06805 Bacteriophage lambda tail assembly protein I 1 64 6.2E-25 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 Pfam PF00171 Aldehyde dehydrogenase family 8 282 2.9E-17 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 PANTHER PTHR11063:SF8 1 417 1.3E-191 T 22-04-2016 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 42.005 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 Gene3D G3DSA:3.40.605.10 375 416 9.5E-105 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 Gene3D G3DSA:3.40.605.10 2 220 9.5E-105 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 3.5E-203 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 SUPERFAMILY SSF53720 3 416 2.09E-117 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 Gene3D G3DSA:3.40.309.10 223 374 8.2E-43 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 PIRSF PIRSF000151 1 417 3.0E-180 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APECO1_RS01380 3faa532f10561b6896614ad42b0e859d 417 PANTHER PTHR11063 1 417 1.3E-191 T 22-04-2016 APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 Gene3D G3DSA:3.40.190.10 223 265 9.3E-47 T 22-04-2016 APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 Gene3D G3DSA:3.40.190.10 38 119 9.3E-47 T 22-04-2016 APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 SUPERFAMILY SSF53850 15 264 1.16E-76 T 22-04-2016 APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 SMART SM00079 42 262 4.4E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 PANTHER PTHR18966 8 264 5.8E-177 T 22-04-2016 APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 1.4E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 Gene3D G3DSA:3.40.190.10 120 222 2.7E-33 T 22-04-2016 APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 SMART SM00062 42 263 5.1E-88 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS10255 da092854e06ff8159d9667c957de75b0 266 PANTHER PTHR18966:SF189 8 264 5.8E-177 T 22-04-2016 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 Gene3D G3DSA:1.10.40.60 107 210 4.8E-40 T 22-04-2016 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 SUPERFAMILY SSF158544 103 210 2.22E-31 T 22-04-2016 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 Pfam PF03934 Type II secretion system (T2SS), protein K 32 312 2.2E-84 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 SUPERFAMILY SSF158544 214 282 3.66E-18 T 22-04-2016 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 Gene3D G3DSA:3.30.1300.30 28 106 2.6E-27 T 22-04-2016 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 Gene3D G3DSA:3.30.1300.30 211 325 1.7E-31 T 22-04-2016 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 PANTHER PTHR38831:SF1 8 310 5.4E-52 T 22-04-2016 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 PIRSF PIRSF002786 4 325 7.4E-67 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 PANTHER PTHR38831 8 310 5.4E-52 T 22-04-2016 APECO1_RS17200 d4d3933b228d10a094c732ae3a0b6a46 325 SUPERFAMILY SSF54523 39 102 2.98E-18 T 22-04-2016 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 SUPERFAMILY SSF46609 1 90 1.23E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 PANTHER PTHR11404 1 204 2.3E-107 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 PIRSF PIRSF000349 1 206 7.5E-81 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 4.8E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.7E-33 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 SUPERFAMILY SSF54719 95 204 1.7E-45 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 4.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 4.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 4.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS22300 0f14364dc47b42d97996f4817dfc5c6a 206 Gene3D G3DSA:1.10.287.990 20 90 2.6E-32 T 22-04-2016 APECO1_RS02065 91ce89c8c196f54ebdda1ef42dfb6aee 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 369 1.7E-192 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02065 91ce89c8c196f54ebdda1ef42dfb6aee 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 369 5.8E-182 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02065 91ce89c8c196f54ebdda1ef42dfb6aee 375 PANTHER PTHR21148:SF26 1 368 4.3E-187 T 22-04-2016 APECO1_RS02065 91ce89c8c196f54ebdda1ef42dfb6aee 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.719 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02065 91ce89c8c196f54ebdda1ef42dfb6aee 375 Gene3D G3DSA:3.20.20.105 1 367 9.2E-171 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02065 91ce89c8c196f54ebdda1ef42dfb6aee 375 SUPERFAMILY SSF51713 1 364 9.94E-164 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02065 91ce89c8c196f54ebdda1ef42dfb6aee 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.2E-93 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02065 91ce89c8c196f54ebdda1ef42dfb6aee 375 PANTHER PTHR21148 1 368 4.3E-187 T 22-04-2016 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 Gene3D G3DSA:1.10.10.60 243 295 4.1E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 Pfam PF12833 Helix-turn-helix domain 266 343 1.2E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 SUPERFAMILY SSF46689 243 292 7.17E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 PANTHER PTHR11019 197 350 1.8E-27 T 22-04-2016 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 296 338 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 SUPERFAMILY SSF52172 1 128 5.55E-26 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 Gene3D G3DSA:3.40.50.2300 2 130 9.3E-26 T 22-04-2016 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 Pfam PF00072 Response regulator receiver domain 4 116 1.7E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 SMART SM00448 2 116 1.1E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 Gene3D G3DSA:1.10.10.60 296 343 4.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 SMART SM00342 259 342 8.3E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 SUPERFAMILY SSF46689 296 343 1.57E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 326 1.05E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 326 342 1.05E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS23800 4bfcc1800a68157c17f011995985f328 351 PANTHER PTHR11019:SF11 197 350 1.8E-27 T 22-04-2016 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 PANTHER PTHR30222 1 327 7.0E-84 T 22-04-2016 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 136 152 9.8E-5 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 9.8E-5 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 9.8E-5 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 SUPERFAMILY SSF53850 33 357 3.78E-53 T 22-04-2016 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 PANTHER PTHR30222:SF5 1 327 7.0E-84 T 22-04-2016 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 Gene3D G3DSA:3.40.190.10 300 327 1.5E-28 T 22-04-2016 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 Gene3D G3DSA:3.40.190.10 35 145 1.5E-28 T 22-04-2016 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 Pfam PF13416 Bacterial extracellular solute-binding protein 56 326 1.7E-23 T 22-04-2016 APECO1_RS07995 8c2a563b2495c5158f79c1390e45a060 381 Gene3D G3DSA:3.40.190.10 147 299 1.2E-26 T 22-04-2016 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 SUPERFAMILY SSF55620 186 268 1.04E-10 T 22-04-2016 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 Pfam PF14489 QueF-like protein 196 270 2.5E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 PANTHER PTHR34354:SF1 2 282 4.7E-112 T 22-04-2016 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 PANTHER PTHR34354 2 282 4.7E-112 T 22-04-2016 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 5.0E-50 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 TIGRFAM TIGR03138 QueF: queuine synthase 11 282 3.4E-131 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 Gene3D G3DSA:3.30.1130.10 145 282 1.7E-56 T 22-04-2016 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 Gene3D G3DSA:3.30.1130.10 21 138 2.4E-45 T 22-04-2016 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 282 169.652 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS15850 17e4017fbae91c8064dfe17c01d0e18d 282 PIRSF PIRSF004750 6 282 4.6E-132 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS08645 a6ef6685b4e8f197db452d6453d98746 309 Gene3D G3DSA:3.50.14.10 7 219 6.0E-87 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APECO1_RS08645 a6ef6685b4e8f197db452d6453d98746 309 Gene3D G3DSA:3.50.14.10 236 281 3.2E-14 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APECO1_RS08645 a6ef6685b4e8f197db452d6453d98746 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 2.0E-137 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APECO1_RS08645 a6ef6685b4e8f197db452d6453d98746 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 74.206 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APECO1_RS08645 a6ef6685b4e8f197db452d6453d98746 309 SUPERFAMILY SSF56596 5 308 2.35E-128 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APECO1_RS08645 a6ef6685b4e8f197db452d6453d98746 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 1.1E-165 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 Gene3D G3DSA:3.10.290.10 1 64 2.1E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 SMART SM00363 1 60 4.2E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 PANTHER PTHR21600:SF19 1 231 8.1E-77 T 22-04-2016 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 SUPERFAMILY SSF55174 1 55 1.62E-12 T 22-04-2016 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 Pfam PF00849 RNA pseudouridylate synthase 62 192 9.7E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 PANTHER PTHR21600 1 231 8.1E-77 T 22-04-2016 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 SUPERFAMILY SSF55120 61 227 1.23E-47 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 Pfam PF01479 S4 domain 1 45 2.9E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS12200 fa03fcb61a8edc1b5b91fad4d162279e 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 8.1E-61 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APECO1_RS24925 8ae950bf46dd086757137c8698a29ebb 422 SUPERFAMILY SSF103473 3 405 4.58E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS24925 8ae950bf46dd086757137c8698a29ebb 422 Gene3D G3DSA:1.20.1250.20 210 409 9.7E-20 T 22-04-2016 APECO1_RS24925 8ae950bf46dd086757137c8698a29ebb 422 Pfam PF07690 Major Facilitator Superfamily 34 355 1.5E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS24925 8ae950bf46dd086757137c8698a29ebb 422 PANTHER PTHR11662:SF283 35 410 1.3E-30 T 22-04-2016 APECO1_RS24925 8ae950bf46dd086757137c8698a29ebb 422 Gene3D G3DSA:1.20.1250.20 7 200 4.0E-20 T 22-04-2016 APECO1_RS24925 8ae950bf46dd086757137c8698a29ebb 422 PANTHER PTHR11662 35 410 1.3E-30 T 22-04-2016 APECO1_RS21210 b9da4c1347e04ccbe4696c3ddad641ed 188 Gene3D G3DSA:3.40.50.360 2 187 2.1E-49 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS21210 b9da4c1347e04ccbe4696c3ddad641ed 188 PANTHER PTHR30543:SF6 1 187 6.9E-74 T 22-04-2016 APECO1_RS21210 b9da4c1347e04ccbe4696c3ddad641ed 188 Pfam PF03358 NADPH-dependent FMN reductase 6 148 4.7E-38 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APECO1_RS21210 b9da4c1347e04ccbe4696c3ddad641ed 188 PANTHER PTHR30543 1 187 6.9E-74 T 22-04-2016 APECO1_RS21210 b9da4c1347e04ccbe4696c3ddad641ed 188 SUPERFAMILY SSF52218 7 178 8.69E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 Pfam PF00267 Gram-negative porin 27 351 7.8E-150 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 SUPERFAMILY SSF56935 22 351 7.85E-79 T 22-04-2016 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 Gene3D G3DSA:2.40.160.10 22 351 4.2E-106 T 22-04-2016 IPR023614 Porin domain APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PANTHER PTHR34501:SF5 2 351 9.3E-298 T 22-04-2016 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PANTHER PTHR34501 2 351 9.3E-298 T 22-04-2016 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.4E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.4E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 228 240 1.4E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 306 323 1.4E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.4E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 306 322 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 234 251 2.9E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.9E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 262 281 2.9E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 2.9E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.9E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS01370 a1b9bb4851dbd4a26c31c601b65b9e4e 351 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 2.9E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS06505 a0b2da53f49701b5a83386d556ba8ddd 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 6.5E-80 T 22-04-2016 IPR023234 NarG-like domain APECO1_RS06505 a0b2da53f49701b5a83386d556ba8ddd 225 Gene3D G3DSA:1.20.950.20 2 216 9.2E-72 T 22-04-2016 APECO1_RS06505 a0b2da53f49701b5a83386d556ba8ddd 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 1.9E-128 T 22-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 APECO1_RS06505 a0b2da53f49701b5a83386d556ba8ddd 225 PANTHER PTHR30598 1 224 5.9E-135 T 22-04-2016 APECO1_RS06505 a0b2da53f49701b5a83386d556ba8ddd 225 SUPERFAMILY SSF103501 1 224 3.66E-71 T 22-04-2016 IPR023234 NarG-like domain APECO1_RS06505 a0b2da53f49701b5a83386d556ba8ddd 225 PANTHER PTHR30598:SF4 1 224 5.9E-135 T 22-04-2016 APECO1_RS04935 2748c3ad89a8a5e27fc4dabd6075d5c4 109 Gene3D G3DSA:3.30.1420.10 1 39 1.6E-12 T 22-04-2016 APECO1_RS04935 2748c3ad89a8a5e27fc4dabd6075d5c4 109 PANTHER PTHR37010:SF1 1 109 5.2E-63 T 22-04-2016 APECO1_RS04935 2748c3ad89a8a5e27fc4dabd6075d5c4 109 SUPERFAMILY SSF69721 2 109 4.97E-42 T 22-04-2016 IPR025526 DsrC-like domain APECO1_RS04935 2748c3ad89a8a5e27fc4dabd6075d5c4 109 PANTHER PTHR37010 1 109 5.2E-63 T 22-04-2016 APECO1_RS04935 2748c3ad89a8a5e27fc4dabd6075d5c4 109 Gene3D G3DSA:1.10.10.370 40 109 1.8E-38 T 22-04-2016 APECO1_RS04935 2748c3ad89a8a5e27fc4dabd6075d5c4 109 PIRSF PIRSF006223 2 109 2.4E-47 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE APECO1_RS04935 2748c3ad89a8a5e27fc4dabd6075d5c4 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 6.9E-50 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE APECO1_RS04935 2748c3ad89a8a5e27fc4dabd6075d5c4 109 Pfam PF04358 DsrC like protein 4 109 1.1E-45 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 8 74 1.1E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 PANTHER PTHR13479 2 74 1.6E-34 T 22-04-2016 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 7.8E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24420 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 PANTHER PTHR11638:SF111 1 756 0.0 T 22-04-2016 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:3.40.50.300 167 350 5.8E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:1.10.8.60 664 754 2.2E-32 T 22-04-2016 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 SMART SM01086 653 744 7.4E-36 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 PANTHER PTHR11638 1 756 0.0 T 22-04-2016 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 SUPERFAMILY SSF52540 169 426 1.77E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.7E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 518 536 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:1.10.8.60 352 435 4.4E-30 T 22-04-2016 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:1.10.1780.10 1 141 1.4E-45 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 342 4.9E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 653 733 7.1E-25 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 491 509 1.2E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 1.2E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 562 580 1.2E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 609 1.2E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 SUPERFAMILY SSF52540 437 748 9.85E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 SUPERFAMILY SSF81923 1 141 1.96E-58 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 647 1.8E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 SMART SM00382 487 654 2.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 SMART SM00382 206 352 2.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04300 a32c23cc0d6ccbb5e17f484494775219 758 Gene3D G3DSA:3.40.50.300 442 663 3.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 Pfam PF07559 Flagellar basal body protein FlaE 173 282 3.2E-20 T 22-04-2016 IPR011491 Flagellar hook protein FlgE APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 SUPERFAMILY SSF117143 73 362 1.31E-84 T 22-04-2016 APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 323 400 2.5E-20 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 PANTHER PTHR30435:SF1 1 117 2.9E-102 T 22-04-2016 APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 PANTHER PTHR30435:SF1 279 401 2.9E-102 T 22-04-2016 APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 Pfam PF00460 Flagella basal body rod protein 4 33 1.1E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 383 1.2E-96 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 PANTHER PTHR30435 1 117 2.9E-102 T 22-04-2016 APECO1_RS05430 6058a6cfd27e2e064d89fd1f29d62c1c 401 PANTHER PTHR30435 279 401 2.9E-102 T 22-04-2016 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Pfam PF10502 Signal peptidase, peptidase S26 261 302 2.5E-7 T 22-04-2016 IPR019533 Peptidase S26 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PANTHER PTHR12383:SF27 246 308 6.2E-109 T 22-04-2016 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PANTHER PTHR12383:SF27 3 175 6.2E-109 T 22-04-2016 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 305 4.1E-43 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PANTHER PTHR12383 246 308 6.2E-109 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PANTHER PTHR12383 3 175 6.2E-109 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 SUPERFAMILY SSF51306 78 323 1.33E-84 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Gene3D G3DSA:2.170.230.10 155 263 8.8E-49 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Gene3D G3DSA:2.10.109.10 264 309 7.2E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Gene3D G3DSA:2.10.109.10 76 154 7.2E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 2.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 2.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 2.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APECO1_RS14520 a54b8e4c2fafdbc49fb848c0b3564b5f 324 Pfam PF00717 Peptidase S24-like 86 160 1.2E-20 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APECO1_RS24595 9718f16e2e82da45c9a8064a1edf0d72 183 Gene3D G3DSA:1.10.60.30 112 182 2.2E-32 T 22-04-2016 IPR023153 PSPTO4464-like domain APECO1_RS24595 9718f16e2e82da45c9a8064a1edf0d72 183 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 24.052 T 22-04-2016 IPR006839 Ribosome-associated, YjgA APECO1_RS24595 9718f16e2e82da45c9a8064a1edf0d72 183 Pfam PF04751 Protein of unknown function (DUF615) 26 176 6.0E-55 T 22-04-2016 IPR006839 Ribosome-associated, YjgA APECO1_RS24595 9718f16e2e82da45c9a8064a1edf0d72 183 Gene3D G3DSA:1.10.60.30 36 110 4.3E-29 T 22-04-2016 IPR023153 PSPTO4464-like domain APECO1_RS24595 9718f16e2e82da45c9a8064a1edf0d72 183 PANTHER PTHR38101 4 183 2.3E-89 T 22-04-2016 APECO1_RS24595 9718f16e2e82da45c9a8064a1edf0d72 183 SUPERFAMILY SSF158710 37 179 3.4E-51 T 22-04-2016 APECO1_RS24595 9718f16e2e82da45c9a8064a1edf0d72 183 PANTHER PTHR38101:SF1 4 183 2.3E-89 T 22-04-2016 APECO1_RS24595 9718f16e2e82da45c9a8064a1edf0d72 183 PIRSF PIRSF016183 10 183 6.6E-72 T 22-04-2016 IPR006839 Ribosome-associated, YjgA APECO1_RS12855 9d9ecf99438a95658f908cf466fbf313 220 PANTHER PTHR38687 2 220 1.7E-69 T 22-04-2016 APECO1_RS12855 9d9ecf99438a95658f908cf466fbf313 220 Pfam PF05036 Sporulation related domain 141 214 4.5E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APECO1_RS12855 9d9ecf99438a95658f908cf466fbf313 220 PANTHER PTHR38687:SF1 2 220 1.7E-69 T 22-04-2016 APECO1_RS12855 9d9ecf99438a95658f908cf466fbf313 220 SUPERFAMILY SSF110997 140 217 1.96E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APECO1_RS12855 9d9ecf99438a95658f908cf466fbf313 220 Hamap MF_02022 Cell division protein DedD [dedD]. 10 219 24.487 T 22-04-2016 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 APECO1_RS12855 9d9ecf99438a95658f908cf466fbf313 220 Gene3D G3DSA:3.30.70.1070 138 216 2.9E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 Gene3D G3DSA:3.40.50.80 455 599 2.4E-59 T 22-04-2016 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 Pfam PF00667 FAD binding domain 230 424 4.2E-27 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 599 8.8E-290 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 SUPERFAMILY SSF52343 444 599 2.23E-52 T 22-04-2016 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 4.14E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 4.14E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 4.14E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 4.14E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 4.14E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 4.14E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 4.14E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 4.14E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PANTHER PTHR19384:SF76 57 599 6.5E-235 T 22-04-2016 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 Gene3D G3DSA:3.40.50.360 56 211 1.8E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PIRSF PIRSF000207 1 599 2.3E-284 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 SUPERFAMILY SSF52218 60 208 8.57E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 Gene3D G3DSA:2.40.30.10 384 454 2.3E-40 T 22-04-2016 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 Gene3D G3DSA:2.40.30.10 229 280 2.3E-40 T 22-04-2016 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 599 53.128 T 22-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PANTHER PTHR19384 57 599 6.5E-235 T 22-04-2016 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 1.7E-22 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 Gene3D G3DSA:1.20.990.10 281 383 4.7E-41 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00369 Flavodoxin signature 65 78 4.99E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00369 Flavodoxin signature 169 188 4.99E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00369 Flavodoxin signature 145 155 4.99E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 PRINTS PR00369 Flavodoxin signature 113 124 4.99E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 Pfam PF00258 Flavodoxin 66 196 4.1E-32 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APECO1_RS15680 3a4a988190c0e24b0f9dbb41724da847 599 SUPERFAMILY SSF63380 227 446 3.83E-64 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 Gene3D G3DSA:1.25.40.10 593 703 3.2E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 SUPERFAMILY SSF48452 53 112 1.24E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 SUPERFAMILY SSF48452 478 547 1.24E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 Pfam PF13429 Tetratricopeptide repeat 563 703 2.6E-7 T 22-04-2016 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 SUPERFAMILY SSF48452 591 698 1.79E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 PANTHER PTHR23083 59 124 2.7E-16 T 22-04-2016 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 PANTHER PTHR23083 589 695 2.7E-16 T 22-04-2016 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 SMART SM00028 646 679 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 SMART SM00028 612 645 6.8E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 SMART SM00028 510 545 300.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 Pfam PF13283 Bacteriophage N adsorption protein A C-term 809 977 3.3E-51 T 22-04-2016 IPR025137 Bacteriophage N4 adsorption protein A, C-terminal APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 Gene3D G3DSA:1.25.40.10 66 114 1.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS02735 9f2d7c5ab9e5f53fcf02b6a44ce53122 990 Gene3D G3DSA:1.25.40.10 480 538 1.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS01735 2303e02896be1ef515784ddd260481df 136 PANTHER PTHR39203 3 136 3.7E-27 T 22-04-2016 APECO1_RS01735 2303e02896be1ef515784ddd260481df 136 PIRSF PIRSF021320 1 136 3.3E-40 T 22-04-2016 IPR009326 Protein of unknown function DUF984 APECO1_RS01735 2303e02896be1ef515784ddd260481df 136 SUPERFAMILY SSF88697 3 134 1.99E-42 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS01735 2303e02896be1ef515784ddd260481df 136 Pfam PF04266 ASCH domain 27 133 1.0E-20 T 22-04-2016 IPR007374 ASCH domain APECO1_RS01735 2303e02896be1ef515784ddd260481df 136 Gene3D G3DSA:3.10.400.10 3 135 4.9E-45 T 22-04-2016 APECO1_RS01735 2303e02896be1ef515784ddd260481df 136 SMART SM01022 17 134 1.5E-32 T 22-04-2016 IPR007374 ASCH domain APECO1_RS17935 243949007a5c272190a3c08a026b3346 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 5.1E-28 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APECO1_RS17935 243949007a5c272190a3c08a026b3346 328 PANTHER PTHR22604 1 316 9.6E-158 T 22-04-2016 APECO1_RS17935 243949007a5c272190a3c08a026b3346 328 Gene3D G3DSA:3.40.50.720 1 142 7.5E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17935 243949007a5c272190a3c08a026b3346 328 SUPERFAMILY SSF51735 2 152 1.45E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17935 243949007a5c272190a3c08a026b3346 328 SUPERFAMILY SSF55347 126 290 1.23E-22 T 22-04-2016 APECO1_RS17935 243949007a5c272190a3c08a026b3346 328 PANTHER PTHR22604:SF76 1 316 9.6E-158 T 22-04-2016 APECO1_RS17935 243949007a5c272190a3c08a026b3346 328 Gene3D G3DSA:3.30.360.10 143 325 6.4E-66 T 22-04-2016 APECO1_RS07895 966d3f174160dcbea59a4ded5c1ba878 176 SUPERFAMILY SSF81342 4 172 7.38E-28 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APECO1_RS07895 966d3f174160dcbea59a4ded5c1ba878 176 PANTHER PTHR30529 1 176 3.7E-142 T 22-04-2016 APECO1_RS07895 966d3f174160dcbea59a4ded5c1ba878 176 PANTHER PTHR30529:SF4 1 176 3.7E-142 T 22-04-2016 APECO1_RS07895 966d3f174160dcbea59a4ded5c1ba878 176 Pfam PF01292 Prokaryotic cytochrome b561 4 172 4.1E-22 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 Pfam PF01964 Radical SAM ThiC family 148 596 1.9E-199 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 PANTHER PTHR30557:SF1 4 106 0.0 T 22-04-2016 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 PANTHER PTHR30557:SF1 198 627 0.0 T 22-04-2016 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 PANTHER PTHR30557:SF1 140 170 0.0 T 22-04-2016 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 599 5.2E-225 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 PANTHER PTHR30557 4 106 0.0 T 22-04-2016 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 PANTHER PTHR30557 198 627 0.0 T 22-04-2016 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 PANTHER PTHR30557 140 170 0.0 T 22-04-2016 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 Pfam PF13667 ThiC-associated domain 27 108 1.0E-32 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APECO1_RS22780 1de981ed893aa1cd6649768b651c31dc 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 601 56.137 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APECO1_RS06450 04a2ee16744fe2b52290f8ce9c2ab392 76 SUPERFAMILY SSF140376 2 75 9.29E-29 T 22-04-2016 APECO1_RS06450 04a2ee16744fe2b52290f8ce9c2ab392 76 Pfam PF06150 ChaB 9 75 9.6E-28 T 22-04-2016 IPR009317 ChaB APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 212 6.4E-90 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 11 212 25.48 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 PANTHER PTHR20836 6 212 5.1E-79 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 PANTHER PTHR20836:SF0 6 212 5.1E-79 T 22-04-2016 APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 96 212 2.7E-35 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 PIRSF PIRSF000161 1 212 2.1E-71 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 Gene3D G3DSA:3.40.50.720 2 131 9.7E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 118 135 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 SUPERFAMILY SSF55347 95 204 7.63E-38 T 22-04-2016 APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 93 6.9E-28 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 SUPERFAMILY SSF51735 2 94 1.64E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS25905 929bcc24dabf8d61ddabaae0eb415159 212 SUPERFAMILY SSF51735 204 212 1.64E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08450 d0c84574b7f2d14052b30f51b12c2660 296 Pfam PF13682 Chemoreceptor zinc-binding domain 22 89 5.3E-5 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 APECO1_RS08450 d0c84574b7f2d14052b30f51b12c2660 296 PANTHER PTHR10799:SF750 87 296 5.1E-22 T 22-04-2016 APECO1_RS08450 d0c84574b7f2d14052b30f51b12c2660 296 SUPERFAMILY SSF55073 134 289 2.04E-41 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS08450 d0c84574b7f2d14052b30f51b12c2660 296 PANTHER PTHR10799 87 296 5.1E-22 T 22-04-2016 APECO1_RS08450 d0c84574b7f2d14052b30f51b12c2660 296 Gene3D G3DSA:3.30.70.270 131 290 4.7E-46 T 22-04-2016 APECO1_RS08450 d0c84574b7f2d14052b30f51b12c2660 296 SMART SM00267 118 287 8.2E-61 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08450 d0c84574b7f2d14052b30f51b12c2660 296 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 283 7.4E-45 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08450 d0c84574b7f2d14052b30f51b12c2660 296 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 127 285 7.2E-39 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS02990 4a0226509d6c97769754283d6c132fca 510 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 36 510 5.1E-246 T 22-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 APECO1_RS02990 4a0226509d6c97769754283d6c132fca 510 Gene3D G3DSA:3.40.810.20 242 483 1.4E-76 T 22-04-2016 APECO1_RS02990 4a0226509d6c97769754283d6c132fca 510 SUPERFAMILY SSF100950 242 508 4.42E-59 T 22-04-2016 APECO1_RS02990 4a0226509d6c97769754283d6c132fca 510 Gene3D G3DSA:3.40.1080.10 29 238 5.2E-108 T 22-04-2016 APECO1_RS02990 4a0226509d6c97769754283d6c132fca 510 PIRSF PIRSF009451 1 510 7.9E-273 T 22-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 APECO1_RS02990 4a0226509d6c97769754283d6c132fca 510 PANTHER PTHR40596 2 510 0.0 T 22-04-2016 APECO1_RS02990 4a0226509d6c97769754283d6c132fca 510 SUPERFAMILY SSF100950 35 238 1.71E-76 T 22-04-2016 APECO1_RS02990 4a0226509d6c97769754283d6c132fca 510 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 43 508 7.6E-274 T 22-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 Gene3D G3DSA:1.10.10.60 215 256 5.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 SMART SM00342 174 256 1.0E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 SUPERFAMILY SSF46689 215 261 6.81E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 PANTHER PTHR11019 28 264 6.3E-55 T 22-04-2016 APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 Pfam PF12833 Helix-turn-helix domain 180 258 1.6E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 SUPERFAMILY SSF51182 11 215 1.09E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 PANTHER PTHR11019:SF99 28 264 6.3E-55 T 22-04-2016 APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 Gene3D G3DSA:2.60.120.10 23 86 1.6E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 Pfam PF02311 AraC-like ligand binding domain 27 80 2.8E-7 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS07400 ad0c7bcb30f33dda8df400ed8ed1b668 271 Gene3D G3DSA:1.10.10.60 153 210 2.4E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS18925 e6c0a669ae4b6ddca275f2f80ecef2fd 72 Pfam PF03889 Domain of unknown function 9 45 9.3E-23 T 22-04-2016 IPR005589 Protein of unknown function DUF331 APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 SUPERFAMILY SSF53335 76 431 1.86E-92 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 Gene3D G3DSA:3.40.50.150 250 431 1.6E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 118 431 1.1E-27 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 363 393 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 Pfam PF01938 TRAM domain 11 67 4.5E-13 T 22-04-2016 IPR002792 TRAM domain APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 424 2.1E-170 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 432 66.837 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 414 424 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 Gene3D G3DSA:2.40.50.140 2 87 2.1E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 PANTHER PTHR11061:SF30 14 433 5.7E-138 T 22-04-2016 APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 PANTHER PTHR11061 14 433 5.7E-138 T 22-04-2016 APECO1_RS15800 f6a48f310a36648c7f55be97b33706cc 433 SUPERFAMILY SSF50249 2 67 1.48E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19820 73d4dd1a7343ce23c4612af6927b0f1f 284 PANTHER PTHR32502 1 284 1.6E-54 T 22-04-2016 APECO1_RS19820 73d4dd1a7343ce23c4612af6927b0f1f 284 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 15 284 6.4E-77 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APECO1_RS19820 73d4dd1a7343ce23c4612af6927b0f1f 284 PANTHER PTHR32502:SF5 1 284 1.6E-54 T 22-04-2016 APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 SMART SM00420 18 70 9.2E-22 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 SMART SM01134 87 248 6.7E-71 T 22-04-2016 APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 SUPERFAMILY SSF46785 16 71 9.09E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 Gene3D G3DSA:1.10.10.10 10 64 5.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 Gene3D G3DSA:3.40.50.1360 90 231 1.0E-16 T 22-04-2016 APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 Pfam PF08220 DeoR-like helix-turn-helix domain 18 74 6.7E-21 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 Pfam PF00455 DeoR C terminal sensor domain 89 247 3.7E-56 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 PANTHER PTHR30363:SF11 12 269 2.7E-134 T 22-04-2016 APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 SUPERFAMILY SSF100950 89 250 6.91E-33 T 22-04-2016 APECO1_RS18110 526e790fcf16498a6ab66721b3178855 274 PANTHER PTHR30363 12 269 2.7E-134 T 22-04-2016 APECO1_RS14700 e18238e13ca0156e0a9d1b770da26ec9 243 SUPERFAMILY SSF64438 4 242 1.01E-89 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic APECO1_RS14700 e18238e13ca0156e0a9d1b770da26ec9 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 1.6E-82 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APECO1_RS14700 e18238e13ca0156e0a9d1b770da26ec9 243 PANTHER PTHR30616:SF3 1 243 7.5E-157 T 22-04-2016 APECO1_RS14700 e18238e13ca0156e0a9d1b770da26ec9 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 8.6E-79 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APECO1_RS14700 e18238e13ca0156e0a9d1b770da26ec9 243 Gene3D G3DSA:3.60.140.10 3 242 2.6E-98 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APECO1_RS14700 e18238e13ca0156e0a9d1b770da26ec9 243 PANTHER PTHR30616 1 243 7.5E-157 T 22-04-2016 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.9E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.9E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 Pfam PF12833 Helix-turn-helix domain 204 281 3.4E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 SMART SM00342 197 280 9.1E-33 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 PANTHER PTHR11019:SF11 12 284 1.8E-95 T 22-04-2016 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 Gene3D G3DSA:1.10.10.60 234 279 1.9E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 Gene3D G3DSA:1.10.10.60 176 233 2.4E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 SUPERFAMILY SSF46689 181 231 2.6E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 PANTHER PTHR11019 12 284 1.8E-95 T 22-04-2016 APECO1_RS13430 f66676c21250906c5aab9dccbf830fd5 285 SUPERFAMILY SSF46689 233 283 1.12E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:4.10.80.40 543 577 5.5E-18 T 22-04-2016 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.5E-5 T 22-04-2016 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.5E-5 T 22-04-2016 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 Pfam PF00890 FAD binding domain 7 397 1.3E-115 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 SUPERFAMILY SSF56425 227 358 6.88E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 PANTHER PTHR11632:SF50 1 584 0.0 T 22-04-2016 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 PIRSF PIRSF000171 1 576 1.0E-42 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 SUPERFAMILY SSF51905 361 415 3.35E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 SUPERFAMILY SSF51905 3 250 3.35E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 3.7E-250 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 PANTHER PTHR11632 1 584 0.0 T 22-04-2016 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:3.90.700.10 234 352 3.6E-37 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:1.20.58.100 426 537 1.4E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:3.50.50.60 353 416 7.5E-106 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 Gene3D G3DSA:3.50.50.60 3 233 7.5E-106 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 5.5E-39 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 3.0E-10 T 22-04-2016 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.0E-10 T 22-04-2016 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 22-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 APECO1_RS24175 e7bc40a01aa18d1a9d8233f3125dee80 602 SUPERFAMILY SSF46977 444 590 2.75E-46 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 PANTHER PTHR22572 79 295 1.4E-63 T 22-04-2016 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 8.3E-22 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 4.4E-7 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 3.5E-7 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 4.6E-10 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.22 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 SUPERFAMILY SSF51161 32 316 1.39E-87 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 Gene3D G3DSA:2.160.10.10 99 140 4.0E-12 T 22-04-2016 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 Gene3D G3DSA:2.160.10.10 141 309 7.0E-42 T 22-04-2016 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.911 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APECO1_RS00945 9c05e17e0e78d6176803e617b4ea065f 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 7.6E-132 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APECO1_RS13130 7d9b42bfb78258579391e90b08260365 471 Pfam PF04466 Phage terminase large subunit 15 450 5.4E-61 T 22-04-2016 IPR006437 Bacteriophage terminase, large subunit GO:0006323 APECO1_RS13130 7d9b42bfb78258579391e90b08260365 471 PANTHER PTHR39184:SF1 1 287 5.9E-52 T 22-04-2016 APECO1_RS13130 7d9b42bfb78258579391e90b08260365 471 PANTHER PTHR39184:SF1 319 462 5.9E-52 T 22-04-2016 APECO1_RS13130 7d9b42bfb78258579391e90b08260365 471 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 15 431 5.3E-123 T 22-04-2016 IPR006437 Bacteriophage terminase, large subunit GO:0006323 APECO1_RS13130 7d9b42bfb78258579391e90b08260365 471 PANTHER PTHR39184 1 287 5.9E-52 T 22-04-2016 APECO1_RS13130 7d9b42bfb78258579391e90b08260365 471 PANTHER PTHR39184 319 462 5.9E-52 T 22-04-2016 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 SMART SM00532 29 425 3.1E-133 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 Gene3D G3DSA:3.30.470.30 128 244 4.9E-20 T 22-04-2016 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 124 153 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 Gene3D G3DSA:1.10.287.610 26 70 2.5E-7 T 22-04-2016 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 385 9.9E-19 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 SUPERFAMILY SSF56091 25 305 8.16E-66 T 22-04-2016 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 Gene3D G3DSA:2.40.50.140 310 381 2.2E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 321 336 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 SUPERFAMILY SSF50249 310 386 4.45E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 PANTHER PTHR23389 3 520 0.0 T 22-04-2016 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 Gene3D G3DSA:1.10.150.20 412 475 5.5E-4 T 22-04-2016 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 114 306 3.7E-23 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 SUPERFAMILY SSF47781 404 556 1.67E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 Hamap MF_01587 DNA ligase B [ligB]. 3 558 52.074 T 22-04-2016 IPR020923 DNA ligase B GO:0003911|GO:0006259 APECO1_RS20830 c87bbba1d29c6db931b391f089991778 560 PANTHER PTHR23389:SF7 3 520 0.0 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 55.181 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 PANTHER PTHR11390:SF27 1 37 0.0 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 PANTHER PTHR11390:SF27 67 776 0.0 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 2.4E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 2.4E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 2.4E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 2.4E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 2.4E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 PANTHER PTHR11390 1 37 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 PANTHER PTHR11390 67 776 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 3.5E-269 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF01751 Toprim domain 5 142 4.8E-34 T 22-04-2016 IPR006171 Toprim domain APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:2.70.20.10 213 333 1.6E-31 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:2.70.20.10 338 473 4.0E-37 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 SMART SM00437 272 527 6.4E-128 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 SMART SM00436 133 221 1.2E-48 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:3.30.65.10 745 806 1.5E-26 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:3.30.65.10 708 743 1.7E-11 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:3.30.65.10 588 629 5.1E-11 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:1.10.460.10 474 578 5.3E-60 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:1.10.460.10 164 211 5.3E-60 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:1.10.460.10 660 666 5.3E-60 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 SUPERFAMILY SSF56712 3 609 3.92E-208 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 862 1.2E-22 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 3.5E-12 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:2.20.25.10 808 865 4.0E-33 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 SUPERFAMILY SSF57783 744 807 1.87E-19 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Gene3D G3DSA:3.40.50.140 1 163 3.2E-59 T 22-04-2016 IPR006171 Toprim domain APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 SMART SM00493 3 132 5.3E-35 T 22-04-2016 IPR006171 Toprim domain APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 SUPERFAMILY SSF57783 704 743 6.12E-7 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 SUPERFAMILY SSF57783 809 864 1.7E-23 T 22-04-2016 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 6.1E-12 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 7.2E-6 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APECO1_RS07050 739f5478c8c1430404d9d4a6e87e24e8 865 Pfam PF01131 DNA topoisomerase 157 565 8.0E-129 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APECO1_RS03280 1283b6d6c0d58ee7c8f18943006b9411 385 PANTHER PTHR11496 3 383 4.1E-89 T 22-04-2016 APECO1_RS03280 1283b6d6c0d58ee7c8f18943006b9411 385 Gene3D G3DSA:3.40.50.1970 4 178 1.3E-41 T 22-04-2016 APECO1_RS03280 1283b6d6c0d58ee7c8f18943006b9411 385 Gene3D G3DSA:1.20.1090.10 179 377 4.1E-58 T 22-04-2016 APECO1_RS03280 1283b6d6c0d58ee7c8f18943006b9411 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 6 370 4.2E-102 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS03280 1283b6d6c0d58ee7c8f18943006b9411 385 SUPERFAMILY SSF56796 5 377 9.16E-101 T 22-04-2016 APECO1_RS18990 56aa23d4e137982cf428a6ee5372d2cc 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 2.9E-47 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18990 56aa23d4e137982cf428a6ee5372d2cc 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.115 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18990 56aa23d4e137982cf428a6ee5372d2cc 117 PANTHER PTHR12899 1 117 3.3E-49 T 22-04-2016 APECO1_RS18990 56aa23d4e137982cf428a6ee5372d2cc 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 7.5E-44 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18990 56aa23d4e137982cf428a6ee5372d2cc 117 Gene3D G3DSA:3.30.420.100 24 117 6.9E-37 T 22-04-2016 APECO1_RS18990 56aa23d4e137982cf428a6ee5372d2cc 117 SUPERFAMILY SSF53137 3 115 5.45E-54 T 22-04-2016 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 3.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 3.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 3.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 3.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 SMART SM00304 187 239 5.7E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 Gene3D G3DSA:1.10.287.130 232 290 4.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 Gene3D G3DSA:3.30.565.10 291 461 7.4E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 SUPERFAMILY SSF47384 223 304 3.53E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 SMART SM00388 240 304 2.0E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 460 1.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 PANTHER PTHR24423:SF531 181 462 2.6E-184 T 22-04-2016 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 PANTHER PTHR24423:SF531 1 10 2.6E-184 T 22-04-2016 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 PANTHER PTHR24423 181 462 2.6E-184 T 22-04-2016 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 PANTHER PTHR24423 1 10 2.6E-184 T 22-04-2016 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 SUPERFAMILY SSF158472 188 236 3.01E-9 T 22-04-2016 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 SUPERFAMILY SSF55874 293 459 3.01E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 Pfam PF00672 HAMP domain 168 235 1.4E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 SMART SM00387 349 461 5.0E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS11520 b8dac418dcaf56dc169e720abe8429f7 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 2.2E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 Gene3D G3DSA:3.50.50.60 146 246 8.8E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 SUPERFAMILY SSF55424 336 450 5.84E-37 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PANTHER PTHR22912:SF106 1 450 1.1E-257 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PIRSF PIRSF000350 1 447 3.1E-86 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 SUPERFAMILY SSF51905 1 365 1.58E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.7E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PANTHER PTHR22912 1 450 1.1E-257 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 2.0E-219 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 3.8E-28 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 3.8E-28 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.8E-28 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 3.8E-28 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 3.8E-28 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 Gene3D G3DSA:3.50.50.60 3 143 1.0E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 Gene3D G3DSA:3.30.390.30 338 450 2.5E-45 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 Gene3D G3DSA:3.50.50.60 247 333 6.7E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 9.8E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.2E-66 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.2E-66 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.2E-66 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 7.2E-66 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 7.2E-66 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.2E-66 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 7.2E-66 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.2E-66 T 22-04-2016 APECO1_RS20035 8ca83637d9b7025e743225a7eab98f0c 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.2E-66 T 22-04-2016 APECO1_RS01160 a857c747daabb94389ff2c9798849c01 480 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 11 476 1.8E-135 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 APECO1_RS01160 a857c747daabb94389ff2c9798849c01 480 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 232 475 8.4E-73 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 APECO1_RS01160 a857c747daabb94389ff2c9798849c01 480 PANTHER PTHR37024:SF2 3 477 2.1E-109 T 22-04-2016 APECO1_RS01160 a857c747daabb94389ff2c9798849c01 480 PANTHER PTHR37024 3 477 2.1E-109 T 22-04-2016 APECO1_RS14535 93f40b1a744dc63f3eff69d65495675d 318 PIRSF PIRSF005427 1 318 2.6E-102 T 22-04-2016 IPR005588 MucB/RseB APECO1_RS14535 93f40b1a744dc63f3eff69d65495675d 318 PANTHER PTHR38782:SF1 2 318 1.6E-142 T 22-04-2016 APECO1_RS14535 93f40b1a744dc63f3eff69d65495675d 318 PANTHER PTHR38782 2 318 1.6E-142 T 22-04-2016 APECO1_RS14535 93f40b1a744dc63f3eff69d65495675d 318 Gene3D G3DSA:2.50.20.10 41 193 7.3E-8 T 22-04-2016 APECO1_RS14535 93f40b1a744dc63f3eff69d65495675d 318 Pfam PF17188 MucB/RseB C-terminal domain 217 313 2.1E-29 T 22-04-2016 IPR033436 MucB/RseB, C-terminal APECO1_RS14535 93f40b1a744dc63f3eff69d65495675d 318 Pfam PF03888 MucB/RseB N-terminal domain 28 197 8.7E-62 T 22-04-2016 IPR033434 MucB/RseB, N-terminal APECO1_RS25215 c277587af6f20a812ecd7441427ec1f0 225 SUPERFAMILY SSF56784 3 222 2.03E-47 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS25215 c277587af6f20a812ecd7441427ec1f0 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 189 2.0E-17 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS25215 c277587af6f20a812ecd7441427ec1f0 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 1.6E-75 T 22-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 APECO1_RS25215 c277587af6f20a812ecd7441427ec1f0 225 Gene3D G3DSA:1.10.150.240 15 89 5.6E-19 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APECO1_RS25215 c277587af6f20a812ecd7441427ec1f0 225 PANTHER PTHR12725:SF57 1 222 2.0E-57 T 22-04-2016 APECO1_RS25215 c277587af6f20a812ecd7441427ec1f0 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 78 194 7.5E-21 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS25215 c277587af6f20a812ecd7441427ec1f0 225 Gene3D G3DSA:3.40.50.1000 90 223 1.6E-44 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS25215 c277587af6f20a812ecd7441427ec1f0 225 PANTHER PTHR12725 1 222 2.0E-57 T 22-04-2016 APECO1_RS25215 c277587af6f20a812ecd7441427ec1f0 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 195 3.5E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 PANTHER PTHR11938 3 157 5.8E-80 T 22-04-2016 APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 PANTHER PTHR11938:SF85 3 157 5.8E-80 T 22-04-2016 APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0022 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 75 118 1.8E-26 T 22-04-2016 APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 7.4E-80 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 4 74 6.5E-18 T 22-04-2016 APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 2.0E-29 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 SUPERFAMILY SSF54862 3 198 6.59E-71 T 22-04-2016 APECO1_RS08535 1012a7f951bc4856368ad18a8de3478a 205 Gene3D G3DSA:3.30.70.20 119 171 2.6E-18 T 22-04-2016 APECO1_RS24505 4203030d055a1f42d3df584dce8b5f28 156 Gene3D G3DSA:1.10.10.10 31 153 4.0E-45 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24505 4203030d055a1f42d3df584dce8b5f28 156 Pfam PF01638 HxlR-like helix-turn-helix 59 145 1.1E-31 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type APECO1_RS24505 4203030d055a1f42d3df584dce8b5f28 156 PANTHER PTHR33204:SF7 37 153 4.1E-73 T 22-04-2016 APECO1_RS24505 4203030d055a1f42d3df584dce8b5f28 156 SUPERFAMILY SSF46785 43 148 5.93E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24505 4203030d055a1f42d3df584dce8b5f28 156 PANTHER PTHR33204 37 153 4.1E-73 T 22-04-2016 APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 SMART SM00858 284 342 6.6E-6 T 22-04-2016 IPR013974 SAF domain APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 PANTHER PTHR23416 5 293 3.2E-88 T 22-04-2016 APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 Pfam PF08666 SAF domain 286 336 5.5E-8 T 22-04-2016 IPR013974 SAF domain APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 5 336 9.5E-137 T 22-04-2016 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 PANTHER PTHR23416:SF62 5 293 3.2E-88 T 22-04-2016 APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 Gene3D G3DSA:3.20.20.70 3 269 2.0E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 SUPERFAMILY SSF51569 3 294 3.54E-86 T 22-04-2016 APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 Gene3D G3DSA:3.90.1210.10 282 345 1.2E-20 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 SUPERFAMILY SSF51269 278 342 2.75E-19 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal APECO1_RS17170 ce1605dcceed0cccc8a147e5b19c4e8b 346 Pfam PF03102 NeuB family 24 269 1.0E-85 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 14 506 3.9E-75 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 SUPERFAMILY SSF69255 374 462 1.62E-25 T 22-04-2016 APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 604 748 5.8E-50 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 PANTHER PTHR32305 26 731 2.0E-146 T 22-04-2016 APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 PANTHER PTHR32305:SF7 26 731 2.0E-146 T 22-04-2016 APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 SUPERFAMILY SSF69279 12 195 2.15E-50 T 22-04-2016 APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 Gene3D G3DSA:2.40.50.230 382 463 1.6E-25 T 22-04-2016 IPR006531 Gp5 N-terminal APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 SUPERFAMILY SSF69279 198 375 6.46E-51 T 22-04-2016 APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 482 583 2.4E-36 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 508 1.1E-138 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 Pfam PF05954 Phage late control gene D protein (GPD) 30 346 3.1E-62 T 22-04-2016 APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 Gene3D G3DSA:3.55.50.10 106 199 9.3E-33 T 22-04-2016 APECO1_RS16000 97106caf894c3ec411a5c9b4fb8f5074 826 Gene3D G3DSA:4.10.180.10 289 304 6.0E-9 T 22-04-2016 IPR027440 Capsid protein alpha-like domain APECO1_RS22535 047f138079f946ebe9d1452906bbaa0f 359 PANTHER PTHR30505:SF1 1 359 2.1E-163 T 22-04-2016 APECO1_RS22535 047f138079f946ebe9d1452906bbaa0f 359 PANTHER PTHR30505 1 359 2.1E-163 T 22-04-2016 APECO1_RS22535 047f138079f946ebe9d1452906bbaa0f 359 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 10 335 2.8E-90 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 Gene3D G3DSA:2.40.160.20 28 199 2.8E-49 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 PANTHER PTHR35892 6 199 2.1E-69 T 22-04-2016 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 191 199 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 Pfam PF06316 Enterobacterial Ail/Lom protein 1 199 1.7E-121 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 187 198 2.5E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 96 119 2.5E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 160 181 2.5E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 49 61 2.5E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 50 58 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 SUPERFAMILY SSF56925 31 199 3.14E-28 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS07715 8468081123d2238fdb6de384e468551b 199 PANTHER PTHR35892:SF1 6 199 2.1E-69 T 22-04-2016 APECO1_RS14735 4fc6e48b5b6f33a16ee1f3c296c3a144 356 Pfam PF00793 DAHP synthetase I family 38 340 9.7E-109 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APECO1_RS14735 4fc6e48b5b6f33a16ee1f3c296c3a144 356 Gene3D G3DSA:3.20.20.70 10 348 1.3E-154 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS14735 4fc6e48b5b6f33a16ee1f3c296c3a144 356 SUPERFAMILY SSF51569 8 346 1.28E-135 T 22-04-2016 APECO1_RS14735 4fc6e48b5b6f33a16ee1f3c296c3a144 356 PANTHER PTHR21225 1 347 1.9E-229 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS14735 4fc6e48b5b6f33a16ee1f3c296c3a144 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 350 8.6E-176 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS14735 4fc6e48b5b6f33a16ee1f3c296c3a144 356 PIRSF PIRSF001361 1 354 5.9E-165 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS05390 64ae15fdb9712bcedec3279de21b3565 307 Gene3D G3DSA:3.40.50.720 2 128 3.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS05390 64ae15fdb9712bcedec3279de21b3565 307 SUPERFAMILY SSF51735 3 137 2.71E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS05390 64ae15fdb9712bcedec3279de21b3565 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 2.5E-25 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APECO1_RS05390 64ae15fdb9712bcedec3279de21b3565 307 SUPERFAMILY SSF55347 126 265 3.01E-43 T 22-04-2016 APECO1_RS05390 64ae15fdb9712bcedec3279de21b3565 307 PANTHER PTHR22604 1 303 8.2E-144 T 22-04-2016 APECO1_RS05390 64ae15fdb9712bcedec3279de21b3565 307 PANTHER PTHR22604:SF126 1 303 8.2E-144 T 22-04-2016 APECO1_RS05390 64ae15fdb9712bcedec3279de21b3565 307 Gene3D G3DSA:3.30.360.10 129 306 1.1E-67 T 22-04-2016 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 Gene3D G3DSA:3.40.309.10 309 404 3.9E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 Gene3D G3DSA:3.40.309.10 214 273 3.9E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 PANTHER PTHR11496:SF79 360 867 0.0 T 22-04-2016 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 Gene3D G3DSA:3.40.605.10 4 206 4.4E-25 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 Pfam PF00171 Aldehyde dehydrogenase family 5 400 8.4E-29 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 Gene3D G3DSA:1.20.1090.10 644 864 1.7E-68 T 22-04-2016 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 PIRSF PIRSF000111 1 866 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 SUPERFAMILY SSF56796 449 867 5.1E-119 T 22-04-2016 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 Gene3D G3DSA:3.40.50.1970 450 643 6.5E-63 T 22-04-2016 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 PANTHER PTHR11496 360 867 0.0 T 22-04-2016 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 6.5E-114 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS06570 b68c92ff252a454909172a5c59056b12 891 SUPERFAMILY SSF53720 6 453 2.62E-85 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS16935 0515d065abc8e1f98be33d50ab85e7b4 454 PANTHER PTHR11662 1 447 3.5E-188 T 22-04-2016 APECO1_RS16935 0515d065abc8e1f98be33d50ab85e7b4 454 PANTHER PTHR11662:SF141 1 447 3.5E-188 T 22-04-2016 APECO1_RS16935 0515d065abc8e1f98be33d50ab85e7b4 454 Gene3D G3DSA:1.20.1250.20 252 437 1.4E-34 T 22-04-2016 APECO1_RS16935 0515d065abc8e1f98be33d50ab85e7b4 454 PIRSF PIRSF002808 6 452 1.1E-106 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS16935 0515d065abc8e1f98be33d50ab85e7b4 454 Pfam PF07690 Major Facilitator Superfamily 34 402 1.1E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS16935 0515d065abc8e1f98be33d50ab85e7b4 454 Gene3D G3DSA:1.20.1250.20 23 222 2.3E-43 T 22-04-2016 APECO1_RS16935 0515d065abc8e1f98be33d50ab85e7b4 454 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 APECO1_RS16935 0515d065abc8e1f98be33d50ab85e7b4 454 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 419 1.0E-147 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS16935 0515d065abc8e1f98be33d50ab85e7b4 454 SUPERFAMILY SSF103473 15 438 2.35E-75 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 SUPERFAMILY SSF63520 55 164 1.31E-27 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 SMART SM01061 1 58 5.0E-19 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 Gene3D G3DSA:2.30.24.10 1 53 3.8E-17 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 Pfam PF03123 CAT RNA binding domain 1 55 1.7E-14 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 PANTHER PTHR30185 1 267 1.3E-59 T 22-04-2016 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 Pfam PF00874 PRD domain 73 160 1.3E-23 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 SUPERFAMILY SSF50151 1 53 1.44E-13 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 PANTHER PTHR30185:SF2 1 267 1.3E-59 T 22-04-2016 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 Gene3D G3DSA:1.10.1790.10 170 267 6.3E-13 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 Gene3D G3DSA:1.10.1790.10 63 163 4.0E-26 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS16115 db495da3c112df9a859e8d2c0e591de0 274 SUPERFAMILY SSF63520 168 267 4.19E-11 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS22145 171acf2853a0e372e7f8a0ab27b42c75 336 PANTHER PTHR11695:SF38 17 336 3.5E-78 T 22-04-2016 APECO1_RS22145 171acf2853a0e372e7f8a0ab27b42c75 336 PANTHER PTHR11695 17 336 3.5E-78 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS22145 171acf2853a0e372e7f8a0ab27b42c75 336 Gene3D G3DSA:3.40.50.720 182 299 1.1E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22145 171acf2853a0e372e7f8a0ab27b42c75 336 SUPERFAMILY SSF51735 140 300 1.25E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22145 171acf2853a0e372e7f8a0ab27b42c75 336 SUPERFAMILY SSF50129 13 175 1.04E-45 T 22-04-2016 IPR011032 GroES-like APECO1_RS22145 171acf2853a0e372e7f8a0ab27b42c75 336 Pfam PF00107 Zinc-binding dehydrogenase 177 295 5.1E-11 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS22145 171acf2853a0e372e7f8a0ab27b42c75 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 134 2.6E-30 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS22145 171acf2853a0e372e7f8a0ab27b42c75 336 SMART SM00829 14 331 0.0042 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS22145 171acf2853a0e372e7f8a0ab27b42c75 336 Gene3D G3DSA:3.90.180.10 3 181 3.3E-49 T 22-04-2016 IPR011032 GroES-like APECO1_RS00665 1f99c44c8e8bdc9c6dfe083293d453b8 288 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 2.6E-125 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 APECO1_RS00665 1f99c44c8e8bdc9c6dfe083293d453b8 288 Gene3D G3DSA:3.40.50.150 57 284 1.5E-83 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS00665 1f99c44c8e8bdc9c6dfe083293d453b8 288 Gene3D G3DSA:2.30.140.10 7 56 2.7E-20 T 22-04-2016 APECO1_RS00665 1f99c44c8e8bdc9c6dfe083293d453b8 288 PANTHER PTHR11558 7 283 1.4E-125 T 22-04-2016 APECO1_RS00665 1f99c44c8e8bdc9c6dfe083293d453b8 288 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 APECO1_RS00665 1f99c44c8e8bdc9c6dfe083293d453b8 288 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.142 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 APECO1_RS00665 1f99c44c8e8bdc9c6dfe083293d453b8 288 Pfam PF01564 Spermine/spermidine synthase 7 239 1.9E-88 T 22-04-2016 APECO1_RS00665 1f99c44c8e8bdc9c6dfe083293d453b8 288 SUPERFAMILY SSF53335 7 283 5.84E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.4E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.4E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.4E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.4E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.4E-54 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 6.8E-52 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Pfam PF02824 TGS domain 4 61 9.6E-13 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 219 4.7E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Gene3D G3DSA:3.30.54.20 130 187 5.6E-20 T 22-04-2016 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.366 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 SUPERFAMILY SSF52954 530 636 2.11E-34 T 22-04-2016 IPR004154 Anticodon-binding APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 PANTHER PTHR11451:SF31 1 642 0.0 T 22-04-2016 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 PANTHER PTHR11451 1 642 0.0 T 22-04-2016 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 SUPERFAMILY SSF81271 3 61 7.85E-17 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 SMART SM00863 170 219 4.6E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Pfam PF03129 Anticodon binding domain 541 630 4.6E-24 T 22-04-2016 IPR004154 Anticodon-binding APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Gene3D G3DSA:3.10.20.30 1 64 1.6E-24 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.2E-248 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Gene3D G3DSA:3.30.930.10 242 529 6.9E-122 T 22-04-2016 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Gene3D G3DSA:3.40.50.800 532 640 6.5E-40 T 22-04-2016 IPR004154 Anticodon-binding APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 SUPERFAMILY SSF55186 63 241 1.83E-65 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Gene3D G3DSA:3.30.980.10 65 129 7.0E-42 T 22-04-2016 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 Gene3D G3DSA:3.30.980.10 188 224 7.0E-42 T 22-04-2016 APECO1_RS09225 94d890c8500b73dc09b67543b299a8ec 642 SUPERFAMILY SSF55681 243 525 1.27E-96 T 22-04-2016 APECO1_RS13990 9a9d1839f6aa2900600d7e8d40132128 231 SMART SM01040 17 107 1.1E-41 T 22-04-2016 IPR003497 BRO N-terminal domain APECO1_RS13990 9a9d1839f6aa2900600d7e8d40132128 231 Pfam PF02498 BRO family, N-terminal domain 17 107 2.5E-22 T 22-04-2016 IPR003497 BRO N-terminal domain APECO1_RS13990 9a9d1839f6aa2900600d7e8d40132128 231 PANTHER PTHR36180 1 150 4.6E-32 T 22-04-2016 APECO1_RS13990 9a9d1839f6aa2900600d7e8d40132128 231 PANTHER PTHR36180:SF2 1 150 4.6E-32 T 22-04-2016 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 PANTHER PTHR11647:SF1 1 460 4.7E-198 T 22-04-2016 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 453 1.5E-201 T 22-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 SUPERFAMILY SSF51338 350 456 3.24E-36 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 Hamap MF_01644 D-phenylhydantoinase [hyuA]. 1 461 98.779 T 22-04-2016 IPR023766 D-phenylhydantoinase GO:0005737|GO:0006208|GO:0016812 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 Gene3D G3DSA:2.30.40.10 2 68 1.4E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 Gene3D G3DSA:3.20.20.140 69 375 5.9E-103 T 22-04-2016 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 Gene3D G3DSA:2.30.40.10 376 460 2.0E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 PANTHER PTHR11647 1 460 4.7E-198 T 22-04-2016 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 Pfam PF01979 Amidohydrolase family 50 434 7.2E-21 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 SUPERFAMILY SSF51338 1 64 8.33E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16320 f7052cafdefba67f8d313e8baf40be94 461 SUPERFAMILY SSF51556 54 382 1.6E-95 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 Pfam PF00107 Zinc-binding dehydrogenase 158 282 2.8E-17 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 Gene3D G3DSA:3.90.180.10 18 138 1.1E-5 T 22-04-2016 IPR011032 GroES-like APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 SUPERFAMILY SSF50129 1 144 2.52E-46 T 22-04-2016 IPR011032 GroES-like APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 PANTHER PTHR11695 15 324 1.5E-182 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 PANTHER PTHR11695:SF13 15 324 1.5E-182 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 Gene3D G3DSA:3.40.50.720 139 289 2.7E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 1.5E-142 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 SMART SM00829 12 321 1.9E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 SUPERFAMILY SSF51735 115 286 2.67E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18675 e3dcdcf4dda21ec41f25c990c336a21b 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 85 1.8E-4 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 Gene3D G3DSA:2.60.40.360 48 163 3.5E-44 T 22-04-2016 IPR008962 PapD-like APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 Gene3D G3DSA:2.60.40.1070 169 245 1.8E-23 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 SUPERFAMILY SSF49584 159 244 8.24E-21 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 PANTHER PTHR30251 15 250 4.3E-80 T 22-04-2016 APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 PRINTS PR00969 Pili chaperone signature 121 138 2.2E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 PRINTS PR00969 Pili chaperone signature 147 162 2.2E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 PRINTS PR00969 Pili chaperone signature 92 113 2.2E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 PRINTS PR00969 Pili chaperone signature 46 55 2.2E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 PRINTS PR00969 Pili chaperone signature 182 197 2.2E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 PANTHER PTHR30251:SF11 15 250 4.3E-80 T 22-04-2016 APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 46 165 7.9E-41 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 187 242 2.4E-12 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 SUPERFAMILY SSF49354 45 165 3.66E-39 T 22-04-2016 IPR008962 PapD-like APECO1_RS19630 4b1cab916ae05e37ac01aa0fbcadb0bc 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 120 137 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APECO1_RS09735 35fcd296f59d1ba87810f0626c2c2095 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 32.392 T 22-04-2016 IPR009328 Protein of unknown function DUF986 APECO1_RS09735 35fcd296f59d1ba87810f0626c2c2095 152 PIRSF PIRSF020687 1 152 5.1E-69 T 22-04-2016 IPR009328 Protein of unknown function DUF986 APECO1_RS09735 35fcd296f59d1ba87810f0626c2c2095 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 6.0E-62 T 22-04-2016 IPR009328 Protein of unknown function DUF986 APECO1_RS09735 35fcd296f59d1ba87810f0626c2c2095 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 21 148 4.0E-69 T 22-04-2016 IPR009328 Protein of unknown function DUF986 APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 PANTHER PTHR26402:SF548 2 239 7.7E-164 T 22-04-2016 APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 PANTHER PTHR26402 2 239 7.7E-164 T 22-04-2016 APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 SUPERFAMILY SSF52172 2 120 2.85E-29 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 Gene3D G3DSA:1.10.10.10 137 235 1.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 SUPERFAMILY SSF46894 139 234 2.72E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 SMART SM00862 157 233 2.0E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 7.2E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 Gene3D G3DSA:3.40.50.2300 2 135 6.2E-29 T 22-04-2016 APECO1_RS08635 ea2a71c755b0f63792ea01673f8d8145 239 SMART SM00448 2 112 4.9E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 PANTHER PTHR35892 1 199 7.3E-64 T 22-04-2016 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 SUPERFAMILY SSF56925 31 199 1.15E-27 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 191 199 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 Gene3D G3DSA:2.40.160.20 28 199 1.1E-47 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 50 58 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 Pfam PF06316 Enterobacterial Ail/Lom protein 1 199 2.4E-126 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 49 61 3.3E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 96 119 3.3E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 160 181 3.3E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 187 198 3.3E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS06930 3e38f390744a84b88ab710208d195cc0 199 PANTHER PTHR35892:SF1 1 199 7.3E-64 T 22-04-2016 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 Gene3D G3DSA:3.30.470.20 224 361 1.1E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 PIRSF PIRSF039102 1 359 2.7E-139 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 PANTHER PTHR23132:SF8 1 364 4.6E-188 T 22-04-2016 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 SUPERFAMILY SSF52440 3 139 2.59E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 4.7E-120 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 Gene3D G3DSA:3.40.50.20 1 129 5.4E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 PANTHER PTHR23132 1 364 4.6E-188 T 22-04-2016 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 SUPERFAMILY SSF56059 140 354 1.45E-60 T 22-04-2016 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.927 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 7.5E-83 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 Gene3D G3DSA:3.30.1490.20 157 223 1.8E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS01940 33eaff4f639c45dd17e5bf0c67ef4c2f 364 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 9.4E-31 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 Gene3D G3DSA:3.40.50.150 86 274 2.4E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 Pfam PF13847 Methyltransferase domain 108 243 1.6E-20 T 22-04-2016 IPR025714 Methyltransferase domain APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 SUPERFAMILY SSF53335 3 275 6.22E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 PANTHER PTHR18895 1 277 1.4E-123 T 22-04-2016 APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 Gene3D G3DSA:1.10.8.10 1 84 5.7E-31 T 22-04-2016 APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 275 47.061 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 PANTHER PTHR18895:SF64 1 277 1.4E-123 T 22-04-2016 APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 8.1E-90 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APECO1_RS06420 3d09b81fd4057f17d6b784be8da1c4ae 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 277 4.4E-107 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PANTHER PTHR34501 2 377 5.3E-282 T 22-04-2016 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.3E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.3E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 328 345 1.3E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 238 250 1.3E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.3E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PANTHER PTHR34501:SF4 2 377 5.3E-282 T 22-04-2016 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 Pfam PF00267 Gram-negative porin 27 377 5.1E-153 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 244 261 4.6E-74 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 4.6E-74 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 4.6E-74 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 4.6E-74 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 4.6E-74 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 4.6E-74 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 SUPERFAMILY SSF56935 22 377 3.14E-87 T 22-04-2016 APECO1_RS07795 caa39a0491daa8866b4791fc8e5efab3 377 Gene3D G3DSA:2.40.160.10 22 377 3.2E-110 T 22-04-2016 IPR023614 Porin domain APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 PANTHER PTHR11575:SF27 1 543 3.8E-256 T 22-04-2016 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 1.9E-16 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 Gene3D G3DSA:3.90.780.10 363 540 1.3E-56 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 PANTHER PTHR11575 1 543 3.8E-256 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 2.7E-32 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 SUPERFAMILY SSF56300 27 360 4.05E-92 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 Gene3D G3DSA:3.60.21.10 28 361 1.1E-92 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 PRINTS PR01607 Apyrase family signature 238 261 4.8E-61 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 PRINTS PR01607 Apyrase family signature 283 303 4.8E-61 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 PRINTS PR01607 Apyrase family signature 417 440 4.8E-61 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 PRINTS PR01607 Apyrase family signature 207 224 4.8E-61 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 PRINTS PR01607 Apyrase family signature 484 503 4.8E-61 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 PRINTS PR01607 Apyrase family signature 32 50 4.8E-61 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS02440 97ebd5ca756fe9298b8a101fed351470 550 SUPERFAMILY SSF55816 363 543 5.76E-54 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS22180 0b6889b0005f431a8a0b64a564d78a9e 313 Gene3D G3DSA:3.10.129.10 145 299 3.7E-65 T 22-04-2016 IPR029069 HotDog domain APECO1_RS22180 0b6889b0005f431a8a0b64a564d78a9e 313 SUPERFAMILY SSF54637 155 297 7.46E-41 T 22-04-2016 IPR029069 HotDog domain APECO1_RS22180 0b6889b0005f431a8a0b64a564d78a9e 313 PANTHER PTHR23091 1 178 1.1E-123 T 22-04-2016 APECO1_RS22180 0b6889b0005f431a8a0b64a564d78a9e 313 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 4.1E-49 T 22-04-2016 IPR012660 Thioesterase, putative APECO1_RS22180 0b6889b0005f431a8a0b64a564d78a9e 313 SUPERFAMILY SSF55729 2 146 4.22E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS22180 0b6889b0005f431a8a0b64a564d78a9e 313 PANTHER PTHR23091:SF249 1 178 1.1E-123 T 22-04-2016 APECO1_RS22180 0b6889b0005f431a8a0b64a564d78a9e 313 Gene3D G3DSA:3.40.630.30 8 144 1.4E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS22180 0b6889b0005f431a8a0b64a564d78a9e 313 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 5.3E-50 T 22-04-2016 IPR012660 Thioesterase, putative APECO1_RS22180 0b6889b0005f431a8a0b64a564d78a9e 313 Pfam PF13673 Acetyltransferase (GNAT) domain 40 129 4.8E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 SUPERFAMILY SSF55008 2 67 2.09E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Gene3D G3DSA:3.30.70.100 101 165 4.9E-24 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 252 827 7.1E-184 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Gene3D G3DSA:3.40.1110.10 535 645 2.7E-18 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Pfam PF00403 Heavy-metal-associated domain 8 62 3.4E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Pfam PF00403 Heavy-metal-associated domain 105 159 3.0E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PANTHER PTHR24093 91 829 0.0 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 291 795 1.8E-90 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 523 529 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 SUPERFAMILY SSF81665 420 515 1.7E-13 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 SUPERFAMILY SSF81665 286 323 1.7E-13 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 SUPERFAMILY SSF81665 767 786 1.7E-13 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Pfam PF00702 haloacid dehalogenase-like hydrolase 518 732 1.1E-49 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 690 706 6.5E-9 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 749 774 6.5E-9 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 718 734 6.5E-9 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 ProSitePatterns PS01047 Heavy-metal-associated domain. 105 134 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 SUPERFAMILY SSF55008 101 166 3.8E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Gene3D G3DSA:3.40.50.1000 646 786 2.2E-55 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Gene3D G3DSA:3.40.50.1000 494 534 2.2E-55 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 654 2.3E-26 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 369 383 2.3E-26 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 675 2.3E-26 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 753 2.3E-26 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 535 2.3E-26 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 737 2.3E-26 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Gene3D G3DSA:3.30.70.100 1 65 2.1E-18 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 SUPERFAMILY SSF56784 519 539 3.35E-59 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 SUPERFAMILY SSF56784 576 824 3.35E-59 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Gene3D G3DSA:2.70.150.10 265 420 1.3E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 ProSitePatterns PS01229 Hypothetical cof family signature 2. 718 740 - T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 Pfam PF00122 E1-E2 ATPase 290 511 3.2E-64 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 PANTHER PTHR24093:SF319 91 829 0.0 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 233 827 5.4E-194 T 22-04-2016 APECO1_RS02475 bf8200137a1996339a87fb770a71ac00 834 SUPERFAMILY SSF81653 322 419 7.85E-25 T 22-04-2016 APECO1_RS14580 100ad01b672bb2cc33c180ab1f6f2298 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APECO1_RS14580 100ad01b672bb2cc33c180ab1f6f2298 127 SUPERFAMILY SSF51998 64 126 3.25E-24 T 22-04-2016 APECO1_RS14580 100ad01b672bb2cc33c180ab1f6f2298 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.1E-70 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA APECO1_RS14580 100ad01b672bb2cc33c180ab1f6f2298 127 PANTHER PTHR30191:SF5 1 127 3.6E-104 T 22-04-2016 APECO1_RS14580 100ad01b672bb2cc33c180ab1f6f2298 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.345 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA APECO1_RS14580 100ad01b672bb2cc33c180ab1f6f2298 127 PIRSF PIRSF000378 2 127 3.3E-56 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA APECO1_RS14580 100ad01b672bb2cc33c180ab1f6f2298 127 Pfam PF01228 Glycine radical 16 108 2.0E-22 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APECO1_RS14580 100ad01b672bb2cc33c180ab1f6f2298 127 PANTHER PTHR30191 1 127 3.6E-104 T 22-04-2016 APECO1_RS14580 100ad01b672bb2cc33c180ab1f6f2298 127 Gene3D G3DSA:3.20.70.20 44 126 2.2E-34 T 22-04-2016 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 Gene3D G3DSA:1.10.10.10 7 78 6.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 Pfam PF01316 Arginine repressor, DNA binding domain 14 75 4.9E-14 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 SUPERFAMILY SSF46785 8 76 9.14E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 PANTHER PTHR34471 6 160 1.2E-32 T 22-04-2016 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 PANTHER PTHR34471:SF1 6 160 1.2E-32 T 22-04-2016 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 PRINTS PR01467 Bacterial arginine repressor signature 95 108 1.4E-13 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 PRINTS PR01467 Bacterial arginine repressor signature 46 61 1.4E-13 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 PRINTS PR01467 Bacterial arginine repressor signature 29 42 1.4E-13 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 PRINTS PR01467 Bacterial arginine repressor signature 125 140 1.4E-13 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 Hamap MF_00173 Arginine repressor [argR]. 1 159 44.399 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 SUPERFAMILY SSF55252 88 155 6.02E-14 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 Gene3D G3DSA:3.30.1360.40 85 157 6.3E-19 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APECO1_RS24665 3abf7e977b0e4310d97afdf8a890bb7f 162 Pfam PF02863 Arginine repressor, C-terminal domain 88 153 1.6E-15 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APECO1_RS21580 2795cebf15748b2e1dba03e8cc117ded 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 376 1.1E-222 T 22-04-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 APECO1_RS21580 2795cebf15748b2e1dba03e8cc117ded 376 Gene3D G3DSA:3.40.640.10 1 248 2.4E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS21580 2795cebf15748b2e1dba03e8cc117ded 376 SUPERFAMILY SSF53383 2 375 6.64E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS21580 2795cebf15748b2e1dba03e8cc117ded 376 Gene3D G3DSA:3.90.1150.10 251 375 4.5E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS21580 2795cebf15748b2e1dba03e8cc117ded 376 PANTHER PTHR30244:SF14 1 376 2.3E-296 T 22-04-2016 APECO1_RS21580 2795cebf15748b2e1dba03e8cc117ded 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 4.1E-86 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APECO1_RS21580 2795cebf15748b2e1dba03e8cc117ded 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 78.433 T 22-04-2016 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315|UniPathway: UPA00566 APECO1_RS21580 2795cebf15748b2e1dba03e8cc117ded 376 PIRSF PIRSF000390 1 376 3.3E-122 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APECO1_RS21580 2795cebf15748b2e1dba03e8cc117ded 376 PANTHER PTHR30244 1 376 2.3E-296 T 22-04-2016 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 SUPERFAMILY SSF52374 6 286 6.76E-89 T 22-04-2016 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 6.0E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 6.0E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 6.0E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 6.0E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 6.0E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 Gene3D G3DSA:3.40.50.620 160 289 2.5E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 Gene3D G3DSA:3.40.50.620 4 148 3.0E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 PANTHER PTHR11451 4 236 9.6E-126 T 22-04-2016 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 274 2.4E-47 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 271 5.5E-114 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 PANTHER PTHR11451:SF35 4 236 9.6E-126 T 22-04-2016 APECO1_RS00780 e60d0ac537357992185a02ec06dea1f5 298 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 290 41.879 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 APECO1_RS12875 7538c5e9db96c635b4488a198b19d824 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 10 247 6.8E-82 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12875 7538c5e9db96c635b4488a198b19d824 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 35.91 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12875 7538c5e9db96c635b4488a198b19d824 270 Gene3D G3DSA:3.30.70.660 115 250 5.4E-47 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12875 7538c5e9db96c635b4488a198b19d824 270 SUPERFAMILY SSF55120 9 265 1.34E-93 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12875 7538c5e9db96c635b4488a198b19d824 270 PANTHER PTHR11142 3 268 5.2E-104 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12875 7538c5e9db96c635b4488a198b19d824 270 PIRSF PIRSF001430 9 260 4.0E-77 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12875 7538c5e9db96c635b4488a198b19d824 270 Gene3D G3DSA:3.30.70.580 10 113 2.5E-39 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12875 7538c5e9db96c635b4488a198b19d824 270 Pfam PF01416 tRNA pseudouridine synthase 151 253 1.8E-28 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS12875 7538c5e9db96c635b4488a198b19d824 270 Pfam PF01416 tRNA pseudouridine synthase 17 112 5.1E-10 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 Pfam PF02421 Ferrous iron transport protein B 5 162 4.3E-64 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 SUPERFAMILY SSF52540 4 170 2.33E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 Pfam PF07670 Nucleoside recognition 512 689 8.8E-37 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 Pfam PF07670 Nucleoside recognition 353 443 6.1E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 6.3E-255 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 PANTHER PTHR11649 1 150 2.8E-289 T 22-04-2016 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 PANTHER PTHR11649 262 612 2.8E-289 T 22-04-2016 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 PANTHER PTHR11649 658 725 2.8E-289 T 22-04-2016 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 Gene3D G3DSA:3.40.50.300 3 171 7.7E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 PANTHER PTHR11649:SF37 1 150 2.8E-289 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 PANTHER PTHR11649:SF37 262 612 2.8E-289 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 PANTHER PTHR11649:SF37 658 725 2.8E-289 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APECO1_RS19505 30c2b7419694f2b77e1338ef65f5695c 773 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 2.8E-20 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 14 31 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 Gene3D G3DSA:3.50.50.60 7 241 2.7E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 SUPERFAMILY SSF51905 9 322 3.54E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 Pfam PF01266 FAD dependent oxidoreductase 10 358 8.0E-51 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 3.2E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 3.2E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 3.2E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 3.2E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 3.2E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 3.2E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 PANTHER PTHR11985 5 541 0.0 T 22-04-2016 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 PANTHER PTHR11985:SF14 5 541 0.0 T 22-04-2016 APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 484 6.2E-10 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APECO1_RS12495 e7ec3bdb83c9883cfead20ed97b6344a 542 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 539 1.1E-265 T 22-04-2016 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 Pfam PF00271 Helicase conserved C-terminal domain 493 601 3.9E-16 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 Gene3D G3DSA:3.40.50.300 154 320 4.9E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 SUPERFAMILY SSF52540 480 654 2.25E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 SMART SM00487 150 342 1.6E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 SUPERFAMILY SSF52540 141 367 1.07E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 SMART SM00490 517 601 1.7E-19 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 1.0E-158 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 Gene3D G3DSA:3.40.50.300 483 627 3.7E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 73.99 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 SUPERFAMILY SSF52540 273 337 2.25E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 PANTHER PTHR10799 150 354 1.2E-270 T 22-04-2016 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 PANTHER PTHR10799 399 694 1.2E-270 T 22-04-2016 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 PANTHER PTHR10799 799 840 1.2E-270 T 22-04-2016 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 PANTHER PTHR10799 887 963 1.2E-270 T 22-04-2016 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 9.0E-19 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 PANTHER PTHR10799:SF610 150 354 1.2E-270 T 22-04-2016 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 PANTHER PTHR10799:SF610 399 694 1.2E-270 T 22-04-2016 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 PANTHER PTHR10799:SF610 799 840 1.2E-270 T 22-04-2016 APECO1_RS00325 a3b77f9c879a57b1831547d8eec906c6 968 PANTHER PTHR10799:SF610 887 963 1.2E-270 T 22-04-2016 APECO1_RS06580 fa0711f0e88339af05915ed35d143e72 543 SUPERFAMILY SSF53850 35 525 1.6E-146 T 22-04-2016 APECO1_RS06580 fa0711f0e88339af05915ed35d143e72 543 Gene3D G3DSA:3.10.105.10 310 511 1.2E-61 T 22-04-2016 APECO1_RS06580 fa0711f0e88339af05915ed35d143e72 543 PIRSF PIRSF002741 1 543 4.9E-111 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APECO1_RS06580 fa0711f0e88339af05915ed35d143e72 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 463 4.1E-88 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS06580 fa0711f0e88339af05915ed35d143e72 543 PANTHER PTHR30290:SF10 9 542 1.5E-211 T 22-04-2016 APECO1_RS06580 fa0711f0e88339af05915ed35d143e72 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site APECO1_RS06580 fa0711f0e88339af05915ed35d143e72 543 Gene3D G3DSA:3.40.190.10 160 309 4.7E-56 T 22-04-2016 APECO1_RS06580 fa0711f0e88339af05915ed35d143e72 543 PANTHER PTHR30290 9 542 1.5E-211 T 22-04-2016 APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 SMART SM00382 28 211 2.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 PANTHER PTHR24220 5 339 2.1E-195 T 22-04-2016 APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 SUPERFAMILY SSF52540 4 243 3.64E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 Gene3D G3DSA:2.40.50.140 290 347 1.1E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 Gene3D G3DSA:2.40.50.100 239 289 2.3E-23 T 22-04-2016 APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 PANTHER PTHR24220:SF572 5 339 2.1E-195 T 22-04-2016 APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 Pfam PF00005 ABC transporter 20 161 2.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 Gene3D G3DSA:3.40.50.300 3 236 7.3E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 Pfam PF08402 TOBE domain 283 355 3.1E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APECO1_RS23040 599aa7bb9acb7c8383cd6e9a94258fbf 371 SUPERFAMILY SSF50331 236 366 4.37E-32 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS17450 01253ca20e74209bc3ba1c7febf7acff 141 PANTHER PTHR30558:SF9 11 136 4.7E-81 T 22-04-2016 APECO1_RS17450 01253ca20e74209bc3ba1c7febf7acff 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 1.7E-70 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 APECO1_RS17450 01253ca20e74209bc3ba1c7febf7acff 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 8.7E-31 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APECO1_RS17450 01253ca20e74209bc3ba1c7febf7acff 141 PANTHER PTHR30558 11 136 4.7E-81 T 22-04-2016 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 Pfam PF00128 Alpha amylase, catalytic domain 273 344 2.9E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 SUPERFAMILY SSF51445 228 621 1.45E-111 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 PIRSF PIRSF000463 6 728 1.6E-285 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 SUPERFAMILY SSF81296 117 223 2.62E-35 T 22-04-2016 IPR014756 Immunoglobulin E-set APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 7.6E-26 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 1.1E-23 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 PANTHER PTHR10357:SF158 49 725 0.0 T 22-04-2016 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 PANTHER PTHR10357 49 725 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 Gene3D G3DSA:3.20.20.80 242 611 1.1E-90 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 SUPERFAMILY SSF81296 16 115 1.22E-18 T 22-04-2016 IPR014756 Immunoglobulin E-set APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 SMART SM00642 247 596 2.5E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 SUPERFAMILY SSF51011 623 726 8.15E-35 T 22-04-2016 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 Gene3D G3DSA:2.60.40.1180 624 725 4.4E-37 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 Gene3D G3DSA:2.60.40.10 14 104 1.4E-20 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 Gene3D G3DSA:2.60.40.10 113 220 1.3E-41 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS19660 1c48db63c5a8425ae2354bb4d7df4db0 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.9 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 Gene3D G3DSA:1.10.10.10 10 91 3.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 SUPERFAMILY SSF53850 102 305 7.14E-31 T 22-04-2016 APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 PANTHER PTHR30419 6 307 7.9E-176 T 22-04-2016 APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 Gene3D G3DSA:3.40.190.10 103 185 3.2E-18 T 22-04-2016 APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 Pfam PF03466 LysR substrate binding domain 101 304 1.3E-32 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 4.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 SUPERFAMILY SSF46785 10 121 7.35E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 PANTHER PTHR30419:SF10 6 307 7.9E-176 T 22-04-2016 APECO1_RS07915 80bedfd69c3882c384cbf5057e6b3dcf 307 Gene3D G3DSA:3.40.190.10 186 272 9.4E-10 T 22-04-2016 APECO1_RS04255 a0110a3bb178da1752974df32c4ff7e5 299 Pfam PF03956 Membrane protein of unknown function (DUF340) 113 297 7.4E-58 T 22-04-2016 IPR005642 Lysine exporter LysO APECO1_RS04255 a0110a3bb178da1752974df32c4ff7e5 299 PANTHER PTHR35804:SF1 2 298 4.1E-100 T 22-04-2016 APECO1_RS04255 a0110a3bb178da1752974df32c4ff7e5 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 7.0E-69 T 22-04-2016 IPR005642 Lysine exporter LysO APECO1_RS04255 a0110a3bb178da1752974df32c4ff7e5 299 PANTHER PTHR35804 2 298 4.1E-100 T 22-04-2016 APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 PANTHER PTHR11654:SF99 5 500 2.7E-255 T 22-04-2016 APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 Pfam PF00854 POT family 89 447 5.5E-94 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 SUPERFAMILY SSF103473 15 212 4.45E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 SUPERFAMILY SSF103473 257 490 4.45E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 49.498 T 22-04-2016 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 Gene3D G3DSA:1.20.1250.20 274 488 1.8E-9 T 22-04-2016 APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 Gene3D G3DSA:1.20.1250.20 21 202 9.8E-18 T 22-04-2016 APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 3.2E-138 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APECO1_RS08775 43bf67259fd328efe434c647102ba706 500 PANTHER PTHR11654 5 500 2.7E-255 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 Gene3D G3DSA:1.10.3370.10 17 437 1.5E-167 T 22-04-2016 IPR023201 SecY subunit domain APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 7.68E-99 T 22-04-2016 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 7.68E-99 T 22-04-2016 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 7.68E-99 T 22-04-2016 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 7.68E-99 T 22-04-2016 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 7.68E-99 T 22-04-2016 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 7.68E-99 T 22-04-2016 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 7.68E-99 T 22-04-2016 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 7.68E-99 T 22-04-2016 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 7.68E-99 T 22-04-2016 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 1.3E-141 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 30.039 T 22-04-2016 IPR026593 Protein translocase subunit SecY APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PIRSF PIRSF004557 11 441 4.2E-124 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 22-04-2016 IPR030659 SecY conserved site APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 SUPERFAMILY SSF103491 16 424 4.18E-134 T 22-04-2016 IPR023201 SecY subunit domain APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PANTHER PTHR10906 18 443 3.4E-236 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 Pfam PF00344 SecY translocase 76 417 4.9E-120 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 22-04-2016 IPR030659 SecY conserved site APECO1_RS18970 4cd214bd2268cc5ab7f4398b9cbc6ce0 443 PANTHER PTHR10906:SF2 18 443 3.4E-236 T 22-04-2016 APECO1_RS17190 c92b43960f006342e44e41d269afc163 178 SUPERFAMILY SSF103054 102 177 1.83E-20 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain APECO1_RS17190 c92b43960f006342e44e41d269afc163 178 Pfam PF04612 Type II secretion system (T2SS), protein M 24 177 2.3E-41 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 APECO1_RS17190 c92b43960f006342e44e41d269afc163 178 PIRSF PIRSF006291 20 177 9.0E-31 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 APECO1_RS17190 c92b43960f006342e44e41d269afc163 178 Gene3D G3DSA:3.30.1360.100 101 178 5.3E-32 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain APECO1_RS12965 c9b2705aa44e39328796074a7ec2601f 167 Pfam PF00419 Fimbrial protein 40 167 5.6E-19 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS12965 c9b2705aa44e39328796074a7ec2601f 167 Gene3D G3DSA:2.60.40.1090 42 167 3.3E-9 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS12965 c9b2705aa44e39328796074a7ec2601f 167 SUPERFAMILY SSF49401 41 167 2.83E-25 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PANTHER PTHR22773:SF50 1 567 3.6E-244 T 22-04-2016 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 9.9E-24 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 3.6E-55 T 22-04-2016 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 3.6E-55 T 22-04-2016 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 3.6E-55 T 22-04-2016 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 3.6E-55 T 22-04-2016 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 3.6E-55 T 22-04-2016 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 3.6E-55 T 22-04-2016 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 3.6E-55 T 22-04-2016 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 610 2.9E-239 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PANTHER PTHR22773 1 567 3.6E-244 T 22-04-2016 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 1.9E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 1.9E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.9E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.9E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APECO1_RS12670 1dea73a6a5408288f3536ce08ab96b9e 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 2.6E-99 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 Gene3D G3DSA:3.30.43.10 2 109 2.3E-31 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 SUPERFAMILY SSF46548 655 691 6.93E-8 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 SUPERFAMILY SSF46548 559 622 6.93E-8 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 Gene3D G3DSA:1.10.1060.10 654 706 3.3E-15 T 22-04-2016 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 Gene3D G3DSA:1.10.1060.10 516 619 3.3E-15 T 22-04-2016 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 1.5E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 3.1E-65 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 Gene3D G3DSA:3.30.465.10 110 282 4.7E-42 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 SUPERFAMILY SSF56176 18 282 2.71E-54 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 SUPERFAMILY SSF55103 258 542 1.96E-52 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 Pfam PF01565 FAD binding domain 52 192 1.1E-37 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 PANTHER PTHR11748:SF35 247 587 6.4E-191 T 22-04-2016 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 PANTHER PTHR11748:SF35 18 196 6.4E-191 T 22-04-2016 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 PANTHER PTHR11748 247 587 6.4E-191 T 22-04-2016 APECO1_RS09055 d15debda96afef98a82da32f12eb2b0f 1018 PANTHER PTHR11748 18 196 6.4E-191 T 22-04-2016 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 SUPERFAMILY SSF53850 92 296 9.96E-42 T 22-04-2016 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 PANTHER PTHR30419:SF0 1 314 9.2E-177 T 22-04-2016 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 PANTHER PTHR30419 1 314 9.2E-177 T 22-04-2016 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 SUPERFAMILY SSF46785 4 112 3.39E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 Gene3D G3DSA:3.40.190.10 178 265 7.4E-20 T 22-04-2016 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 Gene3D G3DSA:3.40.190.10 92 177 1.7E-18 T 22-04-2016 APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 Gene3D G3DSA:1.10.10.10 4 88 1.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03715 8bd02d7e2067704bed00d76c3daa39ec 317 Pfam PF03466 LysR substrate binding domain 91 291 4.1E-43 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS07465 0e3806be9fca91c6b4790d9dbd9ca089 269 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 1 243 1.8E-125 T 22-04-2016 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 APECO1_RS07465 0e3806be9fca91c6b4790d9dbd9ca089 269 Pfam PF03837 RecT family 53 244 4.8E-57 T 22-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 PANTHER PTHR11748:SF82 1 191 1.2E-61 T 22-04-2016 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 PANTHER PTHR11748:SF82 242 327 1.2E-61 T 22-04-2016 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 Gene3D G3DSA:3.30.465.10 107 268 6.1E-84 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 Pfam PF01565 FAD binding domain 47 166 5.3E-8 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 2.4E-147 T 22-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 SUPERFAMILY SSF55103 275 567 5.45E-118 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 Gene3D G3DSA:3.30.70.610 269 342 2.3E-25 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 Gene3D G3DSA:3.30.70.610 377 434 6.7E-21 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 SUPERFAMILY SSF56176 10 271 6.07E-74 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 Gene3D G3DSA:3.30.43.10 4 101 5.7E-9 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 PIRSF PIRSF000101 4 569 0.0 T 22-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 Gene3D G3DSA:3.30.1370.20 435 519 1.2E-46 T 22-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 PANTHER PTHR11748 1 191 1.2E-61 T 22-04-2016 APECO1_RS11935 8f954bf757d59daef52bfe5e457c1cba 571 PANTHER PTHR11748 242 327 1.2E-61 T 22-04-2016 APECO1_RS10320 c51988cec32e4f1a9c2491142357666d 265 SMART SM00342 178 260 6.7E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS10320 c51988cec32e4f1a9c2491142357666d 265 Pfam PF12833 Helix-turn-helix domain 184 261 8.2E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS10320 c51988cec32e4f1a9c2491142357666d 265 SUPERFAMILY SSF46689 213 262 3.58E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS10320 c51988cec32e4f1a9c2491142357666d 265 PANTHER PTHR11019 8 265 3.1E-150 T 22-04-2016 APECO1_RS10320 c51988cec32e4f1a9c2491142357666d 265 Gene3D G3DSA:1.10.10.60 213 262 6.2E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS10320 c51988cec32e4f1a9c2491142357666d 265 PANTHER PTHR11019:SF119 8 265 3.1E-150 T 22-04-2016 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 Gene3D G3DSA:2.30.30.60 945 994 8.8E-18 T 22-04-2016 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 Pfam PF12795 Mechanosensitive ion channel porin domain 50 289 1.8E-64 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 SUPERFAMILY SSF81665 683 770 7.45E-6 T 22-04-2016 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 SUPERFAMILY SSF81665 844 900 7.45E-6 T 22-04-2016 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 SUPERFAMILY SSF81665 504 594 7.45E-6 T 22-04-2016 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 SUPERFAMILY SSF50182 930 995 6.87E-17 T 22-04-2016 IPR010920 LSM domain APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 PANTHER PTHR30347:SF2 10 1118 0.0 T 22-04-2016 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 SUPERFAMILY SSF82689 998 1097 4.71E-26 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 509 826 4.0E-96 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 Gene3D G3DSA:3.30.70.100 999 1084 4.1E-23 T 22-04-2016 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 Pfam PF00924 Mechanosensitive ion channel 887 1086 2.5E-61 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 959 993 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 SUPERFAMILY SSF82861 845 928 1.22E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APECO1_RS02360 3c71c9697f497caf02ae07579b3020aa 1120 PANTHER PTHR30347 10 1118 0.0 T 22-04-2016 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 PIRSF PIRSF000398 1 272 3.5E-68 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 Gene3D G3DSA:3.40.50.150 1 59 2.1E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 Gene3D G3DSA:3.40.50.150 160 267 2.1E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.2E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 4.2E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 4.2E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.2E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 267 4.8E-106 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 PANTHER PTHR30481:SF3 2 273 1.8E-137 T 22-04-2016 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 SUPERFAMILY SSF53335 5 267 5.15E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 PANTHER PTHR30481 2 273 1.8E-137 T 22-04-2016 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 251 1.6E-75 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 Gene3D G3DSA:1.10.1020.10 60 157 1.5E-34 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 APECO1_RS19390 847c46aedb463dd8c17909b174c161cf 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF54814 201 278 3.73E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF47794 355 414 3.61E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 PANTHER PTHR22648 1 448 6.6E-191 T 22-04-2016 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF13184 NusA-like KH domain 230 297 2.1E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.2E-9 T 22-04-2016 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:1.10.150.20 357 414 4.1E-23 T 22-04-2016 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.2E-18 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 4.0E-21 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.272 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.7E-130 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF00575 S1 RNA binding domain 134 195 1.6E-4 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF54814 279 343 3.18E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF50249 132 199 2.03E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF47794 429 492 9.58E-18 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:3.30.1480.10 1 124 1.0E-46 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:1.10.150.20 431 492 4.4E-25 T 22-04-2016 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 SMART SM00316 133 200 7.7E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:3.30.300.20 278 346 5.3E-26 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Pfam PF08529 NusA N-terminal domain 4 123 1.6E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 PANTHER PTHR22648:SF0 1 448 6.6E-191 T 22-04-2016 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 SUPERFAMILY SSF69705 1 126 1.96E-41 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APECO1_RS18295 3e03ed8d35ddb858f919fa9b04e5a497 495 Gene3D G3DSA:2.40.50.140 128 197 3.0E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS21740 6ac4ce2bd72ff6361f3efeab21119baa 296 TIGRFAM TIGR00688 rarD: protein RarD 8 261 2.2E-118 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 APECO1_RS21740 6ac4ce2bd72ff6361f3efeab21119baa 296 SUPERFAMILY SSF103481 187 285 1.7E-6 T 22-04-2016 APECO1_RS21740 6ac4ce2bd72ff6361f3efeab21119baa 296 PANTHER PTHR22911 1 296 1.3E-162 T 22-04-2016 APECO1_RS21740 6ac4ce2bd72ff6361f3efeab21119baa 296 Pfam PF00892 EamA-like transporter family 9 142 6.5E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS21740 6ac4ce2bd72ff6361f3efeab21119baa 296 Pfam PF00892 EamA-like transporter family 152 284 2.1E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS21740 6ac4ce2bd72ff6361f3efeab21119baa 296 PANTHER PTHR22911:SF41 1 296 1.3E-162 T 22-04-2016 APECO1_RS21740 6ac4ce2bd72ff6361f3efeab21119baa 296 SUPERFAMILY SSF103481 42 145 1.7E-12 T 22-04-2016 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 410 425 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 PANTHER PTHR32071 255 639 8.0E-144 T 22-04-2016 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 SUPERFAMILY SSF52540 331 567 1.52E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 Gene3D G3DSA:3.40.50.300 324 496 1.0E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 SUPERFAMILY SSF46689 536 631 8.96E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 351 364 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 SMART SM00382 347 488 5.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 Pfam PF02954 Bacterial regulatory protein, Fis family 589 628 3.4E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 SMART SM00091 203 271 9.7E-6 T 22-04-2016 IPR000014 PAS domain APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 Gene3D G3DSA:3.30.450.20 203 304 1.6E-11 T 22-04-2016 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 Pfam PF00158 Sigma-54 interaction domain 331 490 1.3E-35 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 Pfam PF00989 PAS fold 204 306 1.8E-13 T 22-04-2016 IPR013767 PAS fold GO:0006355 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 PANTHER PTHR32071:SF16 255 639 8.0E-144 T 22-04-2016 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 Gene3D G3DSA:1.10.10.60 580 631 6.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 SUPERFAMILY SSF55785 198 279 7.85E-8 T 22-04-2016 IPR000014 PAS domain APECO1_RS06365 902ee5c7a5873b624a49fec3f0e8492a 639 Gene3D G3DSA:1.10.8.60 498 569 5.7E-13 T 22-04-2016 APECO1_RS04640 2ba64d951bb0fecb699c87dcbb55c800 230 PANTHER PTHR34582 4 228 2.8E-102 T 22-04-2016 APECO1_RS04640 2ba64d951bb0fecb699c87dcbb55c800 230 Pfam PF04239 Protein of unknown function (DUF421) 104 170 1.2E-15 T 22-04-2016 IPR007353 Protein of unknown function DUF421 APECO1_RS04640 2ba64d951bb0fecb699c87dcbb55c800 230 PANTHER PTHR34582:SF6 4 228 2.8E-102 T 22-04-2016 APECO1_RS04640 2ba64d951bb0fecb699c87dcbb55c800 230 Gene3D G3DSA:3.30.240.20 95 167 1.4E-23 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain APECO1_RS15475 e39d82d7397e3243bc37f99ee7d80380 255 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 131 147 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APECO1_RS15475 e39d82d7397e3243bc37f99ee7d80380 255 PANTHER PTHR11995 17 203 2.8E-111 T 22-04-2016 APECO1_RS15475 e39d82d7397e3243bc37f99ee7d80380 255 Gene3D G3DSA:3.40.50.700 37 160 1.5E-26 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APECO1_RS15475 e39d82d7397e3243bc37f99ee7d80380 255 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 157 2.7E-23 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APECO1_RS15475 e39d82d7397e3243bc37f99ee7d80380 255 SUPERFAMILY SSF56770 36 167 7.33E-50 T 22-04-2016 APECO1_RS15475 e39d82d7397e3243bc37f99ee7d80380 255 PANTHER PTHR11995:SF20 17 203 2.8E-111 T 22-04-2016 APECO1_RS23450 0950d2f6c02da7c1227e9ff0944e02c8 185 SUPERFAMILY SSF52540 3 178 3.74E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23450 0950d2f6c02da7c1227e9ff0944e02c8 185 Pfam PF13238 AAA domain 6 139 3.1E-10 T 22-04-2016 APECO1_RS23450 0950d2f6c02da7c1227e9ff0944e02c8 185 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 176 34.597 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 APECO1_RS23450 0950d2f6c02da7c1227e9ff0944e02c8 185 PANTHER PTHR23117:SF8 1 177 2.3E-92 T 22-04-2016 APECO1_RS23450 0950d2f6c02da7c1227e9ff0944e02c8 185 SMART SM00072 2 179 1.8E-37 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APECO1_RS23450 0950d2f6c02da7c1227e9ff0944e02c8 185 PANTHER PTHR23117 1 177 2.3E-92 T 22-04-2016 APECO1_RS23450 0950d2f6c02da7c1227e9ff0944e02c8 185 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 2.2E-74 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 APECO1_RS23450 0950d2f6c02da7c1227e9ff0944e02c8 185 Gene3D G3DSA:3.40.50.300 2 25 1.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23450 0950d2f6c02da7c1227e9ff0944e02c8 185 Gene3D G3DSA:3.40.50.300 73 177 1.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS13445 7052927974b918182e44747780972921 361 SUPERFAMILY SSF55920 127 355 1.09E-76 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS13445 7052927974b918182e44747780972921 361 Gene3D G3DSA:3.40.350.10 4 123 6.9E-16 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APECO1_RS13445 7052927974b918182e44747780972921 361 PANTHER PTHR10804:SF110 124 357 9.8E-88 T 22-04-2016 APECO1_RS13445 7052927974b918182e44747780972921 361 Pfam PF00557 Metallopeptidase family M24 134 342 3.0E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS13445 7052927974b918182e44747780972921 361 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 5.8E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APECO1_RS13445 7052927974b918182e44747780972921 361 PRINTS PR00599 Methionine aminopeptidase-1 signature 310 322 5.8E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APECO1_RS13445 7052927974b918182e44747780972921 361 PANTHER PTHR10804 124 357 9.8E-88 T 22-04-2016 APECO1_RS13445 7052927974b918182e44747780972921 361 SUPERFAMILY SSF53092 7 127 5.23E-14 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APECO1_RS13445 7052927974b918182e44747780972921 361 Gene3D G3DSA:3.90.230.10 127 355 1.1E-83 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS13445 7052927974b918182e44747780972921 361 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 123 6.0E-15 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 SUPERFAMILY SSF53067 85 205 3.04E-27 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 SUPERFAMILY SSF53067 2 44 3.04E-27 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 PANTHER PTHR19375 85 269 2.8E-144 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 Gene3D G3DSA:3.30.420.40 218 241 5.3E-14 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 Gene3D G3DSA:3.30.420.40 374 433 5.3E-14 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 Gene3D G3DSA:3.30.420.40 85 217 1.7E-30 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 Gene3D G3DSA:3.30.420.40 2 43 1.7E-30 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 PANTHER PTHR19375:SF182 85 269 2.8E-144 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 SUPERFAMILY SSF53067 208 276 2.79E-30 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 SUPERFAMILY SSF53067 328 447 2.79E-30 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 PANTHER PTHR19375:SF182 2 44 2.8E-144 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 PANTHER PTHR19375:SF182 321 442 2.8E-144 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 Pfam PF00012 Hsp70 protein 3 228 9.3E-15 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 Pfam PF00012 Hsp70 protein 330 422 3.5E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 Gene3D G3DSA:3.90.640.10 306 365 7.0E-4 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 PANTHER PTHR19375 2 44 2.8E-144 T 22-04-2016 APECO1_RS11480 1c14ba1dd05bfacfe0fd54977a62a7ef 450 PANTHER PTHR19375 321 442 2.8E-144 T 22-04-2016 APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 PANTHER PTHR26402:SF595 1 222 3.9E-168 T 22-04-2016 APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 Pfam PF00072 Response regulator receiver domain 3 113 1.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 SUPERFAMILY SSF46894 118 218 1.42E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 Gene3D G3DSA:3.40.50.2300 1 123 2.0E-35 T 22-04-2016 APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 SUPERFAMILY SSF52172 1 132 8.54E-36 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.7E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 PANTHER PTHR26402 1 222 3.9E-168 T 22-04-2016 APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 SMART SM00448 1 112 7.0E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 SMART SM00862 145 216 9.1E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS23545 10b07bee0594fb966bcc14532718e830 222 Gene3D G3DSA:1.10.10.10 124 219 5.5E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08490 be248a2ede9f976cc15ae20c5d36dd7d 339 PANTHER PTHR11695:SF554 12 339 8.3E-265 T 22-04-2016 APECO1_RS08490 be248a2ede9f976cc15ae20c5d36dd7d 339 Gene3D G3DSA:3.40.50.720 167 279 1.1E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08490 be248a2ede9f976cc15ae20c5d36dd7d 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS08490 be248a2ede9f976cc15ae20c5d36dd7d 339 Pfam PF00107 Zinc-binding dehydrogenase 171 297 2.6E-19 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS08490 be248a2ede9f976cc15ae20c5d36dd7d 339 Gene3D G3DSA:3.90.180.10 1 166 5.6E-57 T 22-04-2016 IPR011032 GroES-like APECO1_RS08490 be248a2ede9f976cc15ae20c5d36dd7d 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 4.5E-36 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS08490 be248a2ede9f976cc15ae20c5d36dd7d 339 PANTHER PTHR11695 12 339 8.3E-265 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS08490 be248a2ede9f976cc15ae20c5d36dd7d 339 SUPERFAMILY SSF50129 1 170 4.87E-53 T 22-04-2016 IPR011032 GroES-like APECO1_RS08490 be248a2ede9f976cc15ae20c5d36dd7d 339 SUPERFAMILY SSF51735 137 304 1.39E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 Gene3D G3DSA:2.60.40.360 27 151 7.4E-46 T 22-04-2016 IPR008962 PapD-like APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 177 239 4.5E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 PANTHER PTHR30251 1 246 1.0E-117 T 22-04-2016 APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 PANTHER PTHR30251:SF2 1 246 1.0E-117 T 22-04-2016 APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 Gene3D G3DSA:2.60.40.1070 157 242 5.2E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 SUPERFAMILY SSF49584 157 244 4.71E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 SUPERFAMILY SSF49354 21 151 9.16E-42 T 22-04-2016 IPR008962 PapD-like APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 PRINTS PR00969 Pili chaperone signature 76 97 3.0E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 PRINTS PR00969 Pili chaperone signature 105 122 3.0E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 PRINTS PR00969 Pili chaperone signature 172 187 3.0E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 PRINTS PR00969 Pili chaperone signature 133 148 3.0E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 PRINTS PR00969 Pili chaperone signature 27 36 3.0E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS00760 b3f44eaf11fe7a2e59fd50f31c6ac247 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 151 2.8E-43 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 SUPERFAMILY SSF51246 331 444 6.28E-44 T 22-04-2016 IPR011054 Rudiment single hybrid motif APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 2.1E-252 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 Gene3D G3DSA:3.40.50.20 1 129 9.4E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.1E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 Gene3D G3DSA:3.30.470.20 204 444 2.8E-100 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 Gene3D G3DSA:3.30.1490.20 130 203 1.9E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 SUPERFAMILY SSF52440 1 113 1.22E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 PANTHER PTHR18866 1 442 0.0 T 22-04-2016 APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 6.6E-38 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 SUPERFAMILY SSF56059 83 347 2.47E-69 T 22-04-2016 APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 SMART SM00878 336 441 4.2E-65 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal APECO1_RS18700 da487e692106172a76b783ffb4f52120 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.3E-86 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APECO1_RS10415 8ecb76ea0b2a41f48e0279621449b66a 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 3.4E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10415 8ecb76ea0b2a41f48e0279621449b66a 207 SUPERFAMILY SSF46894 126 186 8.5E-11 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS10415 8ecb76ea0b2a41f48e0279621449b66a 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10415 8ecb76ea0b2a41f48e0279621449b66a 207 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 207 49.3 T 22-04-2016 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 APECO1_RS10415 8ecb76ea0b2a41f48e0279621449b66a 207 Gene3D G3DSA:1.10.10.10 134 189 6.5E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10415 8ecb76ea0b2a41f48e0279621449b66a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.2E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10415 8ecb76ea0b2a41f48e0279621449b66a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.2E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10415 8ecb76ea0b2a41f48e0279621449b66a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.2E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10415 8ecb76ea0b2a41f48e0279621449b66a 207 SMART SM00421 135 192 5.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PANTHER PTHR11922:SF7 1 185 1.0E-99 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-37 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-37 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-37 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-37 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.8E-37 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-37 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 Pfam PF00117 Glutamine amidotransferase class-I 3 186 2.4E-57 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 Gene3D G3DSA:3.40.50.880 1 186 1.2E-69 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.9E-14 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.9E-14 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 6.9E-14 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 SUPERFAMILY SSF52317 1 186 1.07E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 4.3E-99 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PANTHER PTHR11922 1 185 1.0E-99 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.1E-6 T 22-04-2016 APECO1_RS19285 c89fc73ed2c2de592a61ca3a65a4ddcd 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.1E-6 T 22-04-2016 APECO1_RS24955 ea8960f71f0ba3fc0a40edf46dc71d20 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 5.2E-36 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24955 ea8960f71f0ba3fc0a40edf46dc71d20 260 PIRSF PIRSF006241 1 259 2.6E-96 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 APECO1_RS24955 ea8960f71f0ba3fc0a40edf46dc71d20 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 3 255 5.1E-117 T 22-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 APECO1_RS24955 ea8960f71f0ba3fc0a40edf46dc71d20 260 PANTHER PTHR12110:SF3 1 256 3.0E-93 T 22-04-2016 APECO1_RS24955 ea8960f71f0ba3fc0a40edf46dc71d20 260 Gene3D G3DSA:3.20.20.150 1 256 3.0E-92 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24955 ea8960f71f0ba3fc0a40edf46dc71d20 260 PANTHER PTHR12110 1 256 3.0E-93 T 22-04-2016 APECO1_RS24955 ea8960f71f0ba3fc0a40edf46dc71d20 260 SUPERFAMILY SSF51658 1 256 5.39E-87 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS21270 58d1f6f34e10bbe73f8ab97168dab8a2 296 PANTHER PTHR30425:SF0 5 295 3.5E-136 T 22-04-2016 APECO1_RS21270 58d1f6f34e10bbe73f8ab97168dab8a2 296 PANTHER PTHR30425 5 295 3.5E-136 T 22-04-2016 APECO1_RS21270 58d1f6f34e10bbe73f8ab97168dab8a2 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 293 5.1E-86 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 APECO1_RS21270 58d1f6f34e10bbe73f8ab97168dab8a2 296 SUPERFAMILY SSF161098 35 286 1.09E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS21270 58d1f6f34e10bbe73f8ab97168dab8a2 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 8.2E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS21270 58d1f6f34e10bbe73f8ab97168dab8a2 296 Gene3D G3DSA:1.10.3720.10 27 295 2.7E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.39 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.0E-38 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 Gene3D G3DSA:2.40.50.140 6 82 4.4E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 SUPERFAMILY SSF50249 5 82 7.28E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 4.8E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 4.8E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 4.8E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 PANTHER PTHR10744 6 83 1.4E-44 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19025 269efc68924760e54d96bb26e1d8210a 84 Pfam PF00366 Ribosomal protein S17 10 76 1.7E-34 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS04600 f117d342582e6657d13842a410eb3708 39 Pfam PF06528 Phage P2 GpE 1 36 4.7E-23 T 22-04-2016 IPR009493 Burkholderia phage phiE202, Gp27 APECO1_RS11580 f117d342582e6657d13842a410eb3708 39 Pfam PF06528 Phage P2 GpE 1 36 4.7E-23 T 22-04-2016 IPR009493 Burkholderia phage phiE202, Gp27 APECO1_RS23215 831a5687da56a321a6ae8999dc605323 118 SUPERFAMILY SSF142906 1 116 1.44E-35 T 22-04-2016 APECO1_RS23215 831a5687da56a321a6ae8999dc605323 118 Pfam PF04237 YjbR 12 101 1.6E-18 T 22-04-2016 IPR007351 Uncharacterised protein YjbR APECO1_RS23215 831a5687da56a321a6ae8999dc605323 118 PANTHER PTHR35145 1 118 1.8E-45 T 22-04-2016 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 PANTHER PTHR10617:SF101 1 317 4.2E-80 T 22-04-2016 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 Pfam PF01494 FAD binding domain 135 166 1.8E-5 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 Gene3D G3DSA:3.50.50.60 263 297 3.6E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 Gene3D G3DSA:3.50.50.60 1 171 3.6E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 PANTHER PTHR10617 1 317 4.2E-80 T 22-04-2016 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 5.7E-11 T 22-04-2016 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 5.7E-11 T 22-04-2016 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 5.7E-11 T 22-04-2016 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 SUPERFAMILY SSF51905 3 168 5.34E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS21085 b83f150dbe2b06482f0df0e8ea60af6a 366 SUPERFAMILY SSF51905 251 313 5.34E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS09960 6628f5412cfb4def4d862c2d7263fa8b 261 SUPERFAMILY SSF81345 3 257 8.63E-42 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS09960 6628f5412cfb4def4d862c2d7263fa8b 261 PANTHER PTHR30477 9 259 5.2E-91 T 22-04-2016 APECO1_RS09960 6628f5412cfb4def4d862c2d7263fa8b 261 Gene3D G3DSA:1.10.3470.10 60 259 2.9E-11 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS09960 6628f5412cfb4def4d862c2d7263fa8b 261 Pfam PF00950 ABC 3 transport family 2 257 7.1E-89 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APECO1_RS09960 6628f5412cfb4def4d862c2d7263fa8b 261 PANTHER PTHR30477:SF0 9 259 5.2E-91 T 22-04-2016 APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 361 2.4E-155 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 PANTHER PTHR21152 3 362 8.4E-191 T 22-04-2016 APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 PIRSF PIRSF000525 1 362 2.9E-150 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 51.708 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 SUPERFAMILY SSF53383 4 362 8.19E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 PANTHER PTHR21152:SF1 3 362 8.4E-191 T 22-04-2016 APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 Gene3D G3DSA:3.90.1150.10 260 361 4.2E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 Gene3D G3DSA:3.40.640.10 17 258 9.2E-104 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS04645 d9ac84408fecf85e6d6c4c33435b2c25 362 Pfam PF00266 Aminotransferase class-V 4 350 2.6E-76 T 22-04-2016 IPR000192 Aminotransferase class V domain APECO1_RS01315 315b4fd9b5f050db454a663ca8de04b2 261 Pfam PF00691 OmpA family 120 212 2.9E-15 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS01315 315b4fd9b5f050db454a663ca8de04b2 261 SUPERFAMILY SSF103088 106 222 1.1E-18 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS01315 315b4fd9b5f050db454a663ca8de04b2 261 Gene3D G3DSA:3.30.1330.60 116 222 2.3E-17 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS01315 315b4fd9b5f050db454a663ca8de04b2 261 PANTHER PTHR30329:SF6 7 246 2.1E-127 T 22-04-2016 APECO1_RS01315 315b4fd9b5f050db454a663ca8de04b2 261 PANTHER PTHR30329 7 246 2.1E-127 T 22-04-2016 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 SUPERFAMILY SSF57783 12 49 2.55E-13 T 22-04-2016 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 PANTHER PTHR11390:SF26 10 177 1.6E-97 T 22-04-2016 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 SUPERFAMILY SSF57783 60 99 1.65E-13 T 22-04-2016 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 PANTHER PTHR11390 10 177 1.6E-97 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 Gene3D G3DSA:3.30.65.10 102 136 3.6E-4 T 22-04-2016 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 Gene3D G3DSA:3.30.65.10 62 96 7.7E-15 T 22-04-2016 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 Gene3D G3DSA:3.30.65.10 14 49 4.4E-15 T 22-04-2016 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 2.9E-16 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 62 98 1.6E-18 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 104 142 6.9E-16 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APECO1_RS18885 9f5e9c71923dd61fdedf0959e7af5640 180 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 145 167 0.12 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APECO1_RS16850 114b8a1bd4d12248f7a00b9ed1cd707b 173 Gene3D G3DSA:2.60.40.1090 36 173 3.8E-82 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS16850 114b8a1bd4d12248f7a00b9ed1cd707b 173 Pfam PF00419 Fimbrial protein 30 172 1.2E-14 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS16850 114b8a1bd4d12248f7a00b9ed1cd707b 173 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 19 34 1.8E-49 T 22-04-2016 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 APECO1_RS16850 114b8a1bd4d12248f7a00b9ed1cd707b 173 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 98 114 1.8E-49 T 22-04-2016 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 APECO1_RS16850 114b8a1bd4d12248f7a00b9ed1cd707b 173 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 64 80 1.8E-49 T 22-04-2016 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 APECO1_RS16850 114b8a1bd4d12248f7a00b9ed1cd707b 173 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 143 162 1.8E-49 T 22-04-2016 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 APECO1_RS16850 114b8a1bd4d12248f7a00b9ed1cd707b 173 PRINTS PR01555 Escherichia coli P pili tip fibrillum papE protein signature 125 140 1.8E-49 T 22-04-2016 IPR004086 P pili tip fibrillum PapE protein, Escherichia coli GO:0007155|GO:0009289 APECO1_RS16850 114b8a1bd4d12248f7a00b9ed1cd707b 173 SUPERFAMILY SSF49401 36 172 2.98E-29 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS01715 46176388b33ce8a1d11c6f794e6a0737 515 PANTHER PTHR11117 27 513 2.3E-220 T 22-04-2016 APECO1_RS01715 46176388b33ce8a1d11c6f794e6a0737 515 Pfam PF02629 CoA binding domain 189 283 4.2E-15 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS01715 46176388b33ce8a1d11c6f794e6a0737 515 SUPERFAMILY SSF52210 349 507 1.37E-6 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS01715 46176388b33ce8a1d11c6f794e6a0737 515 SUPERFAMILY SSF52210 180 288 7.33E-20 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS01715 46176388b33ce8a1d11c6f794e6a0737 515 PANTHER PTHR11117:SF10 27 513 2.3E-220 T 22-04-2016 APECO1_RS01715 46176388b33ce8a1d11c6f794e6a0737 515 Gene3D G3DSA:3.40.50.720 101 165 2.6E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS01715 46176388b33ce8a1d11c6f794e6a0737 515 Gene3D G3DSA:3.40.50.261 166 293 3.8E-24 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS01715 46176388b33ce8a1d11c6f794e6a0737 515 Pfam PF00549 CoA-ligase 346 503 4.0E-46 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23305 82b9dc036842b6fd6523e19caca39e68 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 5 318 8.5E-141 T 22-04-2016 IPR017566 NrfD APECO1_RS23305 82b9dc036842b6fd6523e19caca39e68 318 PANTHER PTHR34856 7 316 2.9E-133 T 22-04-2016 APECO1_RS23305 82b9dc036842b6fd6523e19caca39e68 318 Gene3D G3DSA:1.20.1630.10 13 295 9.2E-8 T 22-04-2016 APECO1_RS23305 82b9dc036842b6fd6523e19caca39e68 318 Pfam PF03916 Polysulphide reductase, NrfD 5 318 9.2E-111 T 22-04-2016 IPR005614 NrfD family APECO1_RS23305 82b9dc036842b6fd6523e19caca39e68 318 PANTHER PTHR34856:SF2 7 316 2.9E-133 T 22-04-2016 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 PANTHER PTHR32552 497 760 0.0 T 22-04-2016 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 PANTHER PTHR32552 5 478 0.0 T 22-04-2016 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 PANTHER PTHR32552:SF8 497 760 0.0 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 PANTHER PTHR32552:SF8 5 478 0.0 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 22-04-2016 IPR010916 TonB box, conserved site APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 SUPERFAMILY SSF56935 31 760 1.77E-122 T 22-04-2016 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 Gene3D G3DSA:2.40.170.20 185 760 9.0E-147 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 Pfam PF00593 TonB dependent receptor 514 758 3.3E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 Gene3D G3DSA:2.170.130.10 33 179 3.6E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 760 6.0E-78 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APECO1_RS03905 21379286e7436bf23b06b31f9249270c 760 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 168 3.2E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS24645 d14ba95667ec939b3c82f5d87a3b9a28 128 PANTHER PTHR11803 1 127 8.4E-53 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APECO1_RS24645 d14ba95667ec939b3c82f5d87a3b9a28 128 SUPERFAMILY SSF55298 4 127 6.28E-44 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APECO1_RS24645 d14ba95667ec939b3c82f5d87a3b9a28 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 2.0E-45 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APECO1_RS24645 d14ba95667ec939b3c82f5d87a3b9a28 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 22-04-2016 IPR019897 RidA, conserved site APECO1_RS24645 d14ba95667ec939b3c82f5d87a3b9a28 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 7.7E-54 T 22-04-2016 IPR006056 RidA family APECO1_RS24645 d14ba95667ec939b3c82f5d87a3b9a28 128 Gene3D G3DSA:3.30.1330.40 3 127 2.8E-47 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 Pfam PF02754 Cysteine-rich domain 163 249 1.1E-15 T 22-04-2016 IPR004017 Cysteine-rich domain APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 Pfam PF02754 Cysteine-rich domain 293 376 9.7E-15 T 22-04-2016 IPR004017 Cysteine-rich domain APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 3 395 2.2E-231 T 22-04-2016 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 UniPathway: UPA00618 APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 PANTHER PTHR32479 1 391 6.9E-210 T 22-04-2016 APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 SUPERFAMILY SSF46548 6 82 6.45E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 Gene3D G3DSA:1.10.1060.10 6 84 5.3E-16 T 22-04-2016 APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 Pfam PF13183 4Fe-4S dicluster domain 6 70 2.6E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS12505 7da1c5243f4abb4bd62aaeb84cd5d69c 396 PANTHER PTHR32479:SF9 1 391 6.9E-210 T 22-04-2016 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 Gene3D G3DSA:3.40.50.300 160 348 3.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 PANTHER PTHR11702:SF3 1 378 1.2E-203 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 Gene3D G3DSA:2.70.210.12 2 156 1.4E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 PANTHER PTHR11702 1 378 1.2E-203 T 22-04-2016 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 SUPERFAMILY SSF52540 161 350 1.07E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 Pfam PF01018 GTP1/OBG 3 157 1.3E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 SUPERFAMILY SSF82051 2 157 1.12E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.5E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.5E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.5E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.5E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 3.4E-148 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 1.3E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.475 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APECO1_RS18365 00d717e0b9426e0fc25a9a76bbc2797b 390 PIRSF PIRSF002401 1 376 4.7E-140 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 SUPERFAMILY SSF54862 59 204 9.0E-26 T 22-04-2016 APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:1.10.1060.10 155 196 1.5E-9 T 22-04-2016 APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:1.10.1060.10 42 69 1.5E-9 T 22-04-2016 APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12838 4Fe-4S dicluster domain 60 115 2.1E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 PANTHER PTHR30176:SF3 3 230 1.2E-128 T 22-04-2016 APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12800 4Fe-4S binding domain 136 155 0.033 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 Pfam PF12800 4Fe-4S binding domain 183 196 0.2 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 70 105 3.4E-10 T 22-04-2016 APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 10 216 3.5E-71 T 22-04-2016 IPR004494 MauM/NapG ferredoxin-type protein APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 PANTHER PTHR30176 3 230 1.2E-128 T 22-04-2016 APECO1_RS12310 ca994a507e551f1af2be17e8723917e9 231 Gene3D G3DSA:3.30.70.20 106 154 3.5E-8 T 22-04-2016 APECO1_RS07175 5a7cb8564f3a16f1c620c37e0104d331 387 PANTHER PTHR23502 6 383 1.8E-97 T 22-04-2016 APECO1_RS07175 5a7cb8564f3a16f1c620c37e0104d331 387 PANTHER PTHR23502:SF19 6 383 1.8E-97 T 22-04-2016 APECO1_RS07175 5a7cb8564f3a16f1c620c37e0104d331 387 SUPERFAMILY SSF103473 8 379 5.1E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS07175 5a7cb8564f3a16f1c620c37e0104d331 387 Gene3D G3DSA:1.20.1250.20 205 383 3.7E-13 T 22-04-2016 APECO1_RS07175 5a7cb8564f3a16f1c620c37e0104d331 387 Gene3D G3DSA:1.20.1250.20 10 190 3.4E-31 T 22-04-2016 APECO1_RS07175 5a7cb8564f3a16f1c620c37e0104d331 387 Pfam PF07690 Major Facilitator Superfamily 15 352 6.2E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS07175 5a7cb8564f3a16f1c620c37e0104d331 387 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 378 3.6E-84 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APECO1_RS10330 c8bc6b641823caf4d8ff34124d6579be 110 SUPERFAMILY SSF103481 6 106 2.88E-23 T 22-04-2016 APECO1_RS10330 c8bc6b641823caf4d8ff34124d6579be 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 3.3E-34 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APECO1_RS10330 c8bc6b641823caf4d8ff34124d6579be 110 PANTHER PTHR30561:SF1 1 110 5.5E-60 T 22-04-2016 APECO1_RS10330 c8bc6b641823caf4d8ff34124d6579be 110 PANTHER PTHR30561 1 110 5.5E-60 T 22-04-2016 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 SUPERFAMILY SSF48179 492 595 5.95E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 PANTHER PTHR23309 7 712 0.0 T 22-04-2016 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 SUPERFAMILY SSF51735 308 489 3.61E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 513 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 SUPERFAMILY SSF48179 615 706 8.5E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 Gene3D G3DSA:3.90.226.10 3 204 3.3E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 1.7E-59 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 54.078 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 Gene3D G3DSA:1.10.1040.10 494 586 6.0E-30 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 Gene3D G3DSA:1.10.1040.10 624 709 3.2E-23 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 SUPERFAMILY SSF52096 7 299 5.58E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 586 5.5E-29 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 618 704 4.3E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 204 7.3E-44 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 Gene3D G3DSA:3.40.50.720 305 493 2.4E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12990 17eab8a393bbb8c5876f2b0f1bc624b9 714 PANTHER PTHR23309:SF6 7 712 0.0 T 22-04-2016 APECO1_RS13210 20f936ae00e2db9c22668de4fe4ae543 136 Pfam PF05772 NinB protein 2 131 3.3E-52 T 22-04-2016 IPR008711 Recombinase NinB APECO1_RS13210 20f936ae00e2db9c22668de4fe4ae543 136 SUPERFAMILY SSF103370 2 133 1.31E-44 T 22-04-2016 IPR008711 Recombinase NinB APECO1_RS13210 20f936ae00e2db9c22668de4fe4ae543 136 Gene3D G3DSA:1.10.3790.10 2 134 1.0E-49 T 22-04-2016 IPR008711 Recombinase NinB APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 Gene3D G3DSA:1.10.3720.10 82 153 8.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 Gene3D G3DSA:1.10.3720.10 182 388 1.3E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 PANTHER PTHR30085:SF1 251 393 7.3E-171 T 22-04-2016 APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 PANTHER PTHR30085:SF1 14 172 7.3E-171 T 22-04-2016 APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 260 388 1.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 SUPERFAMILY SSF161098 181 374 5.76E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 SUPERFAMILY SSF161098 83 152 1.44E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 84 147 7.6E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 PANTHER PTHR30085 251 393 7.3E-171 T 22-04-2016 APECO1_RS18815 4ad4ee7032847ab27b3bb0812ec389e4 393 PANTHER PTHR30085 14 172 7.3E-171 T 22-04-2016 APECO1_RS24180 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PANTHER PTHR22594:SF7 15 324 2.9E-161 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APECO1_RS24180 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 57.938 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APECO1_RS24180 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 3.4E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS24180 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 3.4E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS24180 fe3f3fe9e9fd4a541905a78c2ba045f0 325 PANTHER PTHR22594 15 324 2.9E-161 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS24180 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 7.4E-47 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS24180 fe3f3fe9e9fd4a541905a78c2ba045f0 325 SUPERFAMILY SSF55681 12 320 9.38E-85 T 22-04-2016 APECO1_RS24180 fe3f3fe9e9fd4a541905a78c2ba045f0 325 Gene3D G3DSA:3.30.930.10 15 320 1.3E-74 T 22-04-2016 APECO1_RS24180 fe3f3fe9e9fd4a541905a78c2ba045f0 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.0E-132 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 Pfam PF00689 Cation transporting ATPase, C-terminus 722 888 3.3E-14 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PRINTS PR01836 Magnesium-transporting ATPase signature 284 300 2.8E-85 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PRINTS PR01836 Magnesium-transporting ATPase signature 301 320 2.8E-85 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PRINTS PR01836 Magnesium-transporting ATPase signature 405 418 2.8E-85 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PRINTS PR01836 Magnesium-transporting ATPase signature 802 823 2.8E-85 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PRINTS PR01836 Magnesium-transporting ATPase signature 697 712 2.8E-85 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PRINTS PR01836 Magnesium-transporting ATPase signature 767 783 2.8E-85 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PRINTS PR01836 Magnesium-transporting ATPase signature 715 726 2.8E-85 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PRINTS PR01836 Magnesium-transporting ATPase signature 852 873 2.8E-85 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PRINTS PR01836 Magnesium-transporting ATPase signature 747 760 2.8E-85 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 367 653 3.0E-19 T 22-04-2016 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 Gene3D G3DSA:2.70.150.10 150 271 7.8E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 Gene3D G3DSA:2.70.150.10 60 97 7.8E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 SUPERFAMILY SSF81653 168 270 2.88E-29 T 22-04-2016 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 373 379 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 SUPERFAMILY SSF56784 532 683 5.69E-38 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PANTHER PTHR24093:SF356 45 898 0.0 T 22-04-2016 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 33 898 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 123 407 1.9E-38 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 606 728 5.1E-31 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 Gene3D G3DSA:3.40.1110.10 363 546 2.0E-38 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 Pfam PF00122 E1-E2 ATPase 123 362 1.3E-59 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 PANTHER PTHR24093 45 898 0.0 T 22-04-2016 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 Gene3D G3DSA:1.20.1110.10 98 149 4.9E-69 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 Gene3D G3DSA:1.20.1110.10 608 890 4.9E-69 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 SUPERFAMILY SSF81665 272 365 3.27E-104 T 22-04-2016 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 SUPERFAMILY SSF81665 46 155 3.27E-104 T 22-04-2016 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 SUPERFAMILY SSF81665 688 896 3.27E-104 T 22-04-2016 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 Pfam PF00690 Cation transporter/ATPase, N-terminus 48 112 4.9E-14 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 SUPERFAMILY SSF81660 340 543 3.27E-42 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APECO1_RS24640 b220bfc8d2ed6324568eda213db3e6a4 898 SMART SM00831 44 117 1.3E-6 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PANTHER PTHR11482:SF36 463 621 3.5E-294 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PANTHER PTHR11482:SF36 1 390 3.5E-294 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 SUPERFAMILY SSF51419 92 369 1.48E-67 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 43.749 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 99 368 8.0E-74 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 SUPERFAMILY SSF50621 482 584 4.88E-7 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 31 656 1.5E-280 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 7.6E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 7.6E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 7.6E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 7.6E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 7.6E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 391 585 3.4E-23 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 1.7E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 1.7E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 1.7E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 1.7E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 1.7E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 1.7E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 1.7E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 1.7E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 1.7E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PANTHER PTHR11482 463 621 3.5E-294 T 22-04-2016 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PANTHER PTHR11482 1 390 3.5E-294 T 22-04-2016 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:2.40.37.10 356 380 4.6E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:2.40.37.10 479 611 4.6E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 Gene3D G3DSA:3.20.20.10 94 355 6.7E-61 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS16655 412624b5c1215b2bf08615145be9629f 658 PIRSF PIRSF001336 17 658 3.2E-257 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 PANTHER PTHR35177 1 79 8.4E-27 T 22-04-2016 APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 PANTHER PTHR35177:SF2 1 79 8.4E-27 T 22-04-2016 APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 SUPERFAMILY SSF159127 1 76 9.55E-24 T 22-04-2016 APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.4E-24 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 1.4E-24 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 1.4E-24 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 1.4E-24 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 22-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 9.0E-30 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS17380 3799010f2d3257da5915e46316f35c2e 82 Pfam PF01455 HupF/HypC family 1 72 4.0E-25 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS10435 a91d4f0e873ec8f3a1b6ed33a3e5c6c7 558 SMART SM00267 381 555 1.9E-66 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS10435 a91d4f0e873ec8f3a1b6ed33a3e5c6c7 558 Pfam PF17151 Periplasmic sensor domain 35 220 7.9E-83 T 22-04-2016 IPR033416 Periplasmic sensor domain CHASE7 UniPathway: UPA00694 APECO1_RS10435 a91d4f0e873ec8f3a1b6ed33a3e5c6c7 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 392 551 8.9E-47 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS10435 a91d4f0e873ec8f3a1b6ed33a3e5c6c7 558 Gene3D G3DSA:3.30.70.270 394 556 1.0E-51 T 22-04-2016 APECO1_RS10435 a91d4f0e873ec8f3a1b6ed33a3e5c6c7 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 388 554 2.5E-63 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS10435 a91d4f0e873ec8f3a1b6ed33a3e5c6c7 558 PANTHER PTHR10799 429 551 4.7E-22 T 22-04-2016 APECO1_RS10435 a91d4f0e873ec8f3a1b6ed33a3e5c6c7 558 SUPERFAMILY SSF55073 397 556 2.59E-44 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS04230 88f385df360cd888d4bdc576cda9d1a9 476 PANTHER PTHR10366:SF439 259 318 4.8E-192 T 22-04-2016 APECO1_RS04230 88f385df360cd888d4bdc576cda9d1a9 476 Pfam PF13460 NAD(P)H-binding 9 158 8.7E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS04230 88f385df360cd888d4bdc576cda9d1a9 476 PANTHER PTHR10366:SF439 4 238 4.8E-192 T 22-04-2016 APECO1_RS04230 88f385df360cd888d4bdc576cda9d1a9 476 Pfam PF11066 Protein of unknown function (DUF2867) 331 463 1.4E-11 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 APECO1_RS04230 88f385df360cd888d4bdc576cda9d1a9 476 PANTHER PTHR10366 4 238 4.8E-192 T 22-04-2016 APECO1_RS04230 88f385df360cd888d4bdc576cda9d1a9 476 PANTHER PTHR10366 259 318 4.8E-192 T 22-04-2016 APECO1_RS04230 88f385df360cd888d4bdc576cda9d1a9 476 SUPERFAMILY SSF55961 335 473 5.6E-5 T 22-04-2016 APECO1_RS04230 88f385df360cd888d4bdc576cda9d1a9 476 Gene3D G3DSA:3.40.50.720 3 221 8.9E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS04230 88f385df360cd888d4bdc576cda9d1a9 476 SUPERFAMILY SSF51735 3 294 2.76E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02260 d0ef553e5d2c8cb69946942eae828262 231 Gene3D G3DSA:3.40.50.620 1 222 1.0E-86 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS02260 d0ef553e5d2c8cb69946942eae828262 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 53.608 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APECO1_RS02260 d0ef553e5d2c8cb69946942eae828262 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 3.9E-89 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APECO1_RS02260 d0ef553e5d2c8cb69946942eae828262 231 PANTHER PTHR11587:SF3 1 224 3.2E-108 T 22-04-2016 APECO1_RS02260 d0ef553e5d2c8cb69946942eae828262 231 PANTHER PTHR11587 1 224 3.2E-108 T 22-04-2016 APECO1_RS02260 d0ef553e5d2c8cb69946942eae828262 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 3.7E-85 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APECO1_RS02260 d0ef553e5d2c8cb69946942eae828262 231 SUPERFAMILY SSF52402 1 221 9.48E-72 T 22-04-2016 APECO1_RS02260 d0ef553e5d2c8cb69946942eae828262 231 PIRSF PIRSF006293 1 226 1.1E-88 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APECO1_RS16810 784d9d37359deade3b329f73e3749517 420 SUPERFAMILY SSF56349 97 388 8.24E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS16810 784d9d37359deade3b329f73e3749517 420 PANTHER PTHR30629:SF4 1 418 2.7E-157 T 22-04-2016 APECO1_RS16810 784d9d37359deade3b329f73e3749517 420 Gene3D G3DSA:1.10.150.130 97 193 1.0E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS16810 784d9d37359deade3b329f73e3749517 420 Pfam PF13356 Domain of unknown function (DUF4102) 3 86 1.4E-21 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 APECO1_RS16810 784d9d37359deade3b329f73e3749517 420 Gene3D G3DSA:1.10.443.10 208 384 9.3E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS16810 784d9d37359deade3b329f73e3749517 420 PANTHER PTHR30629 1 418 2.7E-157 T 22-04-2016 APECO1_RS16810 784d9d37359deade3b329f73e3749517 420 Pfam PF00589 Phage integrase family 221 382 7.2E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS19015 843856d29a4c77ef91291d40b46e77cd 104 SUPERFAMILY SSF50104 4 100 2.84E-33 T 22-04-2016 IPR008991 Translation protein SH3-like domain APECO1_RS19015 843856d29a4c77ef91291d40b46e77cd 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19015 843856d29a4c77ef91291d40b46e77cd 104 PANTHER PTHR12903 4 103 3.6E-49 T 22-04-2016 APECO1_RS19015 843856d29a4c77ef91291d40b46e77cd 104 Pfam PF00467 KOW motif 8 37 7.6E-5 T 22-04-2016 IPR005824 KOW APECO1_RS19015 843856d29a4c77ef91291d40b46e77cd 104 SMART SM00739 4 31 9.8E-4 T 22-04-2016 IPR005824 KOW APECO1_RS19015 843856d29a4c77ef91291d40b46e77cd 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.6E-39 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19015 843856d29a4c77ef91291d40b46e77cd 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.134 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19015 843856d29a4c77ef91291d40b46e77cd 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 2.0E-23 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19015 843856d29a4c77ef91291d40b46e77cd 104 Gene3D G3DSA:2.30.30.30 3 92 3.2E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APECO1_RS09090 18299c9a31c141c4e030ed0e5b40966d 531 Gene3D G3DSA:3.40.1080.10 15 252 1.2E-64 T 22-04-2016 APECO1_RS09090 18299c9a31c141c4e030ed0e5b40966d 531 PANTHER PTHR13707:SF38 4 517 7.4E-257 T 22-04-2016 APECO1_RS09090 18299c9a31c141c4e030ed0e5b40966d 531 SUPERFAMILY SSF100950 284 523 5.02E-67 T 22-04-2016 APECO1_RS09090 18299c9a31c141c4e030ed0e5b40966d 531 SMART SM00882 15 253 3.0E-49 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS09090 18299c9a31c141c4e030ed0e5b40966d 531 Gene3D G3DSA:3.40.810.20 287 510 3.0E-54 T 22-04-2016 APECO1_RS09090 18299c9a31c141c4e030ed0e5b40966d 531 PANTHER PTHR13707 4 517 7.4E-257 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS09090 18299c9a31c141c4e030ed0e5b40966d 531 SUPERFAMILY SSF100950 15 264 2.19E-80 T 22-04-2016 APECO1_RS09090 18299c9a31c141c4e030ed0e5b40966d 531 Pfam PF01144 Coenzyme A transferase 16 252 3.2E-57 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS09090 18299c9a31c141c4e030ed0e5b40966d 531 PIRSF PIRSF000858 10 530 1.2E-207 T 22-04-2016 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 APECO1_RS09940 bb950be7d212ef42cc91b1a84316b90f 323 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 3.4E-110 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APECO1_RS09940 bb950be7d212ef42cc91b1a84316b90f 323 PANTHER PTHR30606 9 323 4.8E-214 T 22-04-2016 APECO1_RS09940 bb950be7d212ef42cc91b1a84316b90f 323 PANTHER PTHR30606:SF4 9 323 4.8E-214 T 22-04-2016 APECO1_RS09940 bb950be7d212ef42cc91b1a84316b90f 323 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 53.814 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 APECO1_RS09940 bb950be7d212ef42cc91b1a84316b90f 323 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 314 6.9E-157 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 APECO1_RS09940 bb950be7d212ef42cc91b1a84316b90f 323 PIRSF PIRSF026649 9 314 2.6E-105 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 400 119.325 T 22-04-2016 IPR008135 Competence-induced protein CinA APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 399 4.1E-189 T 22-04-2016 IPR008135 Competence-induced protein CinA APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 SUPERFAMILY SSF53218 2 204 1.44E-35 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 PIRSF PIRSF006728 1 384 7.0E-114 T 22-04-2016 IPR008135 Competence-induced protein CinA APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 167 2.1E-38 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 PANTHER PTHR13939:SF3 2 386 2.5E-276 T 22-04-2016 APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 Gene3D G3DSA:3.40.980.10 2 202 1.7E-28 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 Pfam PF00994 Probable molybdopterin binding domain 6 170 6.0E-31 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 SMART SM00852 5 172 2.3E-35 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 SUPERFAMILY SSF142433 249 378 2.88E-5 T 22-04-2016 IPR008136 CinA, C-terminal APECO1_RS12540 0db33a6b33aa07c7a85f2b0a3aed1a8a 400 PANTHER PTHR13939 2 386 2.5E-276 T 22-04-2016 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.5E-13 T 22-04-2016 IPR000014 PAS domain APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00388 282 347 5.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF47226 661 773 2.09E-27 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:3.40.50.2300 524 648 6.3E-32 T 22-04-2016 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF52172 526 647 1.99E-27 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00073 675 772 4.0E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00091 155 221 4.3E-7 T 22-04-2016 IPR000014 PAS domain APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:3.30.565.10 348 506 9.4E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 PIRSF PIRSF003182 1 778 0.0 T 22-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:1.10.287.130 274 343 1.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 504 4.2E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 2.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 PANTHER PTHR24423 4 95 0.0 T 22-04-2016 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 PANTHER PTHR24423 153 677 0.0 T 22-04-2016 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 PANTHER PTHR24423:SF476 4 95 0.0 T 22-04-2016 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 PANTHER PTHR24423:SF476 153 677 0.0 T 22-04-2016 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00387 394 507 2.0E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:1.20.120.160 676 776 1.2E-34 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:3.30.450.20 141 267 3.7E-20 T 22-04-2016 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF00072 Response regulator receiver domain 528 639 5.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Gene3D G3DSA:1.10.287.970 1 89 3.3E-41 T 22-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF47384 269 347 3.92E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF00989 PAS fold 156 266 1.1E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF55874 336 503 3.41E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SMART SM00448 526 639 7.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF01627 Hpt domain 686 760 1.6E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS18500 588787783cdeb0f4a18bd57f23cc53ae 778 SUPERFAMILY SSF55785 140 267 3.49E-20 T 22-04-2016 IPR000014 PAS domain APECO1_RS13965 ab50960ce82975012abc8712f6dc5964 209 SUPERFAMILY SSF53955 94 208 2.53E-42 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS13965 ab50960ce82975012abc8712f6dc5964 209 SUPERFAMILY SSF53955 12 65 2.53E-42 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS13965 ab50960ce82975012abc8712f6dc5964 209 PANTHER PTHR34408 95 208 1.3E-32 T 22-04-2016 APECO1_RS13965 ab50960ce82975012abc8712f6dc5964 209 PANTHER PTHR34408 3 58 1.3E-32 T 22-04-2016 APECO1_RS13965 ab50960ce82975012abc8712f6dc5964 209 Pfam PF00182 Chitinase class I 109 169 3.0E-8 T 22-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 APECO1_RS13965 ab50960ce82975012abc8712f6dc5964 209 Gene3D G3DSA:1.10.530.10 154 208 1.2E-6 T 22-04-2016 APECO1_RS13965 ab50960ce82975012abc8712f6dc5964 209 Gene3D G3DSA:1.10.530.10 34 52 1.2E-6 T 22-04-2016 APECO1_RS13965 ab50960ce82975012abc8712f6dc5964 209 Gene3D G3DSA:3.30.20.10 115 153 9.4E-14 T 22-04-2016 APECO1_RS15595 0fdc9eb18fe2e81cc49b01a7dd635933 183 Gene3D G3DSA:3.40.50.360 1 183 1.1E-60 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15595 0fdc9eb18fe2e81cc49b01a7dd635933 183 SUPERFAMILY SSF52218 1 182 9.04E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15595 0fdc9eb18fe2e81cc49b01a7dd635933 183 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APECO1_RS15595 0fdc9eb18fe2e81cc49b01a7dd635933 183 Pfam PF03358 NADPH-dependent FMN reductase 44 112 2.7E-9 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APECO1_RS15595 0fdc9eb18fe2e81cc49b01a7dd635933 183 PANTHER PTHR30546:SF0 1 183 3.0E-26 T 22-04-2016 APECO1_RS15595 0fdc9eb18fe2e81cc49b01a7dd635933 183 PANTHER PTHR30546 1 183 3.0E-26 T 22-04-2016 APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 274 9.1E-30 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 Gene3D G3DSA:3.40.50.1220 185 311 2.5E-48 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 Hamap MF_01056 Protein FixB [fixB]. 1 313 59.16 T 22-04-2016 IPR023461 Electron transfer flavoprotein FixB subunit GO:0009437 UniPathway: UPA00117 APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 SUPERFAMILY SSF52467 190 309 9.27E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 Gene3D G3DSA:3.40.50.620 5 171 1.9E-24 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 SMART SM00893 7 180 3.4E-14 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 PANTHER PTHR10909:SF328 78 309 2.9E-83 T 22-04-2016 APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 Pfam PF01012 Electron transfer flavoprotein domain 43 169 1.0E-14 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 SUPERFAMILY SSF52402 7 169 1.33E-22 T 22-04-2016 APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 PANTHER PTHR10909 78 309 2.9E-83 T 22-04-2016 APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 255 281 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site APECO1_RS00240 6d6780cc0be9987800aff5485ea61625 313 PIRSF PIRSF000089 3 313 5.1E-85 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 APECO1_RS15820 f2603744fde33f57a35b72612c21b015 450 PANTHER PTHR11662 8 445 3.9E-241 T 22-04-2016 APECO1_RS15820 f2603744fde33f57a35b72612c21b015 450 PIRSF PIRSF002808 2 448 1.2E-43 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS15820 f2603744fde33f57a35b72612c21b015 450 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 2.4E-162 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS15820 f2603744fde33f57a35b72612c21b015 450 Gene3D G3DSA:1.20.1250.20 14 214 3.2E-46 T 22-04-2016 APECO1_RS15820 f2603744fde33f57a35b72612c21b015 450 SUPERFAMILY SSF103473 13 444 1.96E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS15820 f2603744fde33f57a35b72612c21b015 450 Pfam PF07690 Major Facilitator Superfamily 25 318 1.4E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS15820 f2603744fde33f57a35b72612c21b015 450 PANTHER PTHR11662:SF18 8 445 3.9E-241 T 22-04-2016 APECO1_RS15820 f2603744fde33f57a35b72612c21b015 450 Gene3D G3DSA:1.20.1250.20 245 442 6.0E-33 T 22-04-2016 APECO1_RS12470 59d36ff0422a3a4e1b66e8be929c4ce8 376 PANTHER PTHR23409 197 376 6.3E-283 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APECO1_RS12470 59d36ff0422a3a4e1b66e8be929c4ce8 376 PANTHER PTHR23409 1 173 6.3E-283 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APECO1_RS12470 59d36ff0422a3a4e1b66e8be929c4ce8 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS12470 59d36ff0422a3a4e1b66e8be929c4ce8 376 PANTHER PTHR23409:SF23 197 376 6.3E-283 T 22-04-2016 APECO1_RS12470 59d36ff0422a3a4e1b66e8be929c4ce8 376 PANTHER PTHR23409:SF23 1 173 6.3E-283 T 22-04-2016 APECO1_RS12470 59d36ff0422a3a4e1b66e8be929c4ce8 376 SUPERFAMILY SSF47240 3 340 4.33E-117 T 22-04-2016 IPR009078 Ferritin-like superfamily APECO1_RS12470 59d36ff0422a3a4e1b66e8be929c4ce8 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 5.9E-50 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APECO1_RS12470 59d36ff0422a3a4e1b66e8be929c4ce8 376 Gene3D G3DSA:1.10.620.20 3 340 4.4E-129 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 299 316 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 417 9.9E-146 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 PANTHER PTHR23508:SF12 14 431 0.0 T 22-04-2016 APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 PANTHER PTHR23508 14 431 0.0 T 22-04-2016 APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 SUPERFAMILY SSF103473 18 430 2.88E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 Pfam PF00083 Sugar (and other) transporter 223 419 1.6E-11 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 Pfam PF00083 Sugar (and other) transporter 24 221 5.1E-26 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 Gene3D G3DSA:1.20.1250.20 240 428 6.8E-18 T 22-04-2016 APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 Gene3D G3DSA:1.20.1250.20 22 227 2.2E-25 T 22-04-2016 APECO1_RS14625 32958917a7a8b63df603bbc59400c9c8 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 Gene3D G3DSA:3.30.420.10 148 365 1.0E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 PANTHER PTHR10322 70 783 4.4E-220 T 22-04-2016 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 7.0E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 489 501 7.0E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 541 549 7.0E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 SMART SM00486 148 555 7.2E-82 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 Pfam PF00136 DNA polymerase family B 382 735 6.7E-42 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 SUPERFAMILY SSF53098 3 389 1.56E-97 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 SUPERFAMILY SSF56672 394 783 7.79E-116 T 22-04-2016 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 164 1.1E-4 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 204 296 3.8E-6 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 Gene3D G3DSA:3.90.1600.10 512 644 7.8E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 Gene3D G3DSA:3.90.1600.10 400 431 7.8E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00330 9b961280ad8fe4481f3de9a2c2a9f01f 783 ProSitePatterns PS00116 DNA polymerase family B signature. 543 551 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 62 81 1.0E-33 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 7 25 1.0E-33 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 42 62 1.0E-33 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 PRINTS PR00625 DnaJ domain signature 25 40 1.0E-33 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF49493 210 256 2.49E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF49493 111 166 2.49E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 Pfam PF01556 DnaJ C terminal domain 118 330 1.2E-45 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.60.260.20 207 251 3.4E-22 T 22-04-2016 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.60.260.20 103 137 3.4E-22 T 22-04-2016 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF49493 256 341 6.02E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 Pfam PF00684 DnaJ central domain 144 204 3.8E-16 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:1.10.287.110 1 102 4.1E-38 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.10.230.10 138 206 5.4E-27 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 PANTHER PTHR24078:SF231 1 356 1.3E-178 T 22-04-2016 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF57938 131 207 3.14E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 Gene3D G3DSA:2.60.260.20 253 330 3.2E-23 T 22-04-2016 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 SMART SM00271 4 62 1.5E-31 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 SUPERFAMILY SSF46565 1 106 9.29E-37 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 1.1E-143 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 Pfam PF00226 DnaJ domain 5 67 8.3E-29 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 PANTHER PTHR24078 1 356 1.3E-178 T 22-04-2016 APECO1_RS00080 6bd18f18743b5794f931d27923d1c4b0 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 43.067 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 39.215 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 PANTHER PTHR22855 1 301 1.3E-188 T 22-04-2016 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 SUPERFAMILY SSF52096 23 284 7.96E-92 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 Pfam PF01039 Carboxyl transferase domain 54 265 3.3E-19 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 4.7E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 4.7E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 4.7E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 4.7E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 4.7E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 1.7E-152 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 Gene3D G3DSA:3.90.226.10 17 285 1.1E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS12865 00f16035247d9646639b739f14fd7dc5 304 PANTHER PTHR22855:SF17 1 301 1.3E-188 T 22-04-2016 APECO1_RS19210 c43be483346ab64b86ac46b5009ec176 270 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 152 1.1E-36 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APECO1_RS19210 c43be483346ab64b86ac46b5009ec176 270 Gene3D G3DSA:1.10.287.460 30 134 9.9E-45 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APECO1_RS19210 c43be483346ab64b86ac46b5009ec176 270 SUPERFAMILY SSF54534 41 249 2.36E-65 T 22-04-2016 APECO1_RS19210 c43be483346ab64b86ac46b5009ec176 270 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 246 8.7E-29 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APECO1_RS19210 c43be483346ab64b86ac46b5009ec176 270 PANTHER PTHR10516 130 252 2.8E-51 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APECO1_RS19210 c43be483346ab64b86ac46b5009ec176 270 Gene3D G3DSA:3.10.50.40 135 249 2.3E-45 T 22-04-2016 APECO1_RS05695 80f323ea4c5029e5444db1a4a12582ce 373 PANTHER PTHR13096 7 337 1.0E-80 T 22-04-2016 APECO1_RS05695 80f323ea4c5029e5444db1a4a12582ce 373 Gene3D G3DSA:2.60.120.650 7 206 3.0E-44 T 22-04-2016 APECO1_RS05695 80f323ea4c5029e5444db1a4a12582ce 373 SUPERFAMILY SSF51197 7 292 1.51E-74 T 22-04-2016 APECO1_RS05695 80f323ea4c5029e5444db1a4a12582ce 373 SMART SM00558 92 215 5.8E-10 T 22-04-2016 IPR003347 JmjC domain APECO1_RS05695 80f323ea4c5029e5444db1a4a12582ce 373 Pfam PF08007 Cupin superfamily protein 10 310 3.2E-104 T 22-04-2016 IPR003347 JmjC domain APECO1_RS22140 ba50c6d634825c83b8e72e7442eb0cf7 295 SMART SM01133 20 262 9.3E-7 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APECO1_RS22140 ba50c6d634825c83b8e72e7442eb0cf7 295 Hamap MF_01912 Sulfofructosephosphate aldolase. 5 295 68.442 T 22-04-2016 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 APECO1_RS22140 ba50c6d634825c83b8e72e7442eb0cf7 295 Gene3D G3DSA:3.20.20.70 9 292 8.2E-93 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS22140 ba50c6d634825c83b8e72e7442eb0cf7 295 PIRSF PIRSF037840 1 295 2.1E-140 T 22-04-2016 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 APECO1_RS22140 ba50c6d634825c83b8e72e7442eb0cf7 295 PANTHER PTHR39340 1 295 8.4E-99 T 22-04-2016 APECO1_RS22140 ba50c6d634825c83b8e72e7442eb0cf7 295 PANTHER PTHR39340:SF1 1 295 8.4E-99 T 22-04-2016 APECO1_RS22140 ba50c6d634825c83b8e72e7442eb0cf7 295 SUPERFAMILY SSF51569 9 290 9.16E-60 T 22-04-2016 APECO1_RS22140 ba50c6d634825c83b8e72e7442eb0cf7 295 Pfam PF01791 DeoC/LacD family aldolase 21 261 2.3E-46 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APECO1_RS06600 eb9a5d8bd9a35a58ef0dde36e6659d39 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 1.2E-27 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS06600 eb9a5d8bd9a35a58ef0dde36e6659d39 334 SMART SM00382 49 242 5.9E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS06600 eb9a5d8bd9a35a58ef0dde36e6659d39 334 Gene3D G3DSA:3.40.50.300 10 266 1.6E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06600 eb9a5d8bd9a35a58ef0dde36e6659d39 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS06600 eb9a5d8bd9a35a58ef0dde36e6659d39 334 PANTHER PTHR24220:SF544 13 329 9.7E-200 T 22-04-2016 APECO1_RS06600 eb9a5d8bd9a35a58ef0dde36e6659d39 334 PANTHER PTHR24220 13 329 9.7E-200 T 22-04-2016 APECO1_RS06600 eb9a5d8bd9a35a58ef0dde36e6659d39 334 Pfam PF00005 ABC transporter 41 192 5.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS06600 eb9a5d8bd9a35a58ef0dde36e6659d39 334 SUPERFAMILY SSF52540 22 264 1.9E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06600 eb9a5d8bd9a35a58ef0dde36e6659d39 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 9.7E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS00295 a1cbd4efa3bb2c6809939be648897391 273 SMART SM00650 25 198 2.0E-84 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APECO1_RS00295 a1cbd4efa3bb2c6809939be648897391 273 PANTHER PTHR11727 1 267 1.7E-97 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APECO1_RS00295 a1cbd4efa3bb2c6809939be648897391 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 3.5E-89 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APECO1_RS00295 a1cbd4efa3bb2c6809939be648897391 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 1.0E-89 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APECO1_RS00295 a1cbd4efa3bb2c6809939be648897391 273 Gene3D G3DSA:1.10.8.100 201 266 1.5E-25 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like APECO1_RS00295 a1cbd4efa3bb2c6809939be648897391 273 SUPERFAMILY SSF53335 17 266 4.23E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS00295 a1cbd4efa3bb2c6809939be648897391 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APECO1_RS00295 a1cbd4efa3bb2c6809939be648897391 273 Gene3D G3DSA:3.40.50.150 6 198 1.3E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS00295 a1cbd4efa3bb2c6809939be648897391 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 54.804 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 Pfam PF01467 Cytidylyltransferase-like 345 469 3.5E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 3.0E-130 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 Pfam PF00294 pfkB family carbohydrate kinase 12 305 4.9E-60 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 Gene3D G3DSA:3.40.50.620 340 461 6.5E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 SUPERFAMILY SSF52374 340 471 7.32E-22 T 22-04-2016 APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 Gene3D G3DSA:3.40.1190.20 13 313 1.2E-69 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 PANTHER PTHR10584:SF159 1 338 1.3E-158 T 22-04-2016 APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 SUPERFAMILY SSF53613 12 309 5.14E-60 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.6E-64 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.522 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APECO1_RS17765 1fc2249e1c4bebb40e213b246a12a9ed 477 PANTHER PTHR10584 1 338 1.3E-158 T 22-04-2016 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 1.1E-13 T 22-04-2016 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 PANTHER PTHR11228 1 54 5.5E-64 T 22-04-2016 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 PANTHER PTHR11228 73 222 5.5E-64 T 22-04-2016 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 PANTHER PTHR11228:SF6 1 54 5.5E-64 T 22-04-2016 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 PANTHER PTHR11228:SF6 73 222 5.5E-64 T 22-04-2016 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 Gene3D G3DSA:3.20.20.70 29 136 1.4E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 Pfam PF04055 Radical SAM superfamily 27 132 2.7E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 PIRSF PIRSF000370 1 223 1.6E-72 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 40.282 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 SUPERFAMILY SSF102114 24 119 3.66E-7 T 22-04-2016 APECO1_RS15745 fc1f2bf975f839694f5b1a06ed00be22 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 2.0E-111 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APECO1_RS04420 5aea474352a433a301123c45d55c9dfb 331 PANTHER PTHR30349 83 318 1.2E-34 T 22-04-2016 APECO1_RS04420 5aea474352a433a301123c45d55c9dfb 331 Gene3D G3DSA:1.10.150.130 84 161 9.7E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS04420 5aea474352a433a301123c45d55c9dfb 331 Pfam PF00589 Phage integrase family 167 309 2.5E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS04420 5aea474352a433a301123c45d55c9dfb 331 Pfam PF14657 AP2-like DNA-binding integrase domain 10 48 1.6E-5 T 22-04-2016 IPR028259 AP2-like integrase, N-terminal domain APECO1_RS04420 5aea474352a433a301123c45d55c9dfb 331 PANTHER PTHR30349:SF20 83 318 1.2E-34 T 22-04-2016 APECO1_RS04420 5aea474352a433a301123c45d55c9dfb 331 Gene3D G3DSA:1.10.443.10 164 318 1.3E-34 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS04420 5aea474352a433a301123c45d55c9dfb 331 SUPERFAMILY SSF56349 60 318 1.97E-46 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 4.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 4.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PANTHER PTHR24322:SF392 5 131 1.5E-97 T 22-04-2016 APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PANTHER PTHR24322:SF392 147 179 1.5E-97 T 22-04-2016 APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 Gene3D G3DSA:3.40.50.720 2 232 2.0E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PANTHER PTHR24322 5 131 1.5E-97 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PANTHER PTHR24322 147 179 1.5E-97 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 Pfam PF00106 short chain dehydrogenase 2 187 4.3E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 SUPERFAMILY SSF51735 2 231 3.45E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.5E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.5E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.5E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.5E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08465 9bdfe4f16a3663578f0e24acd5402a1f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.5E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 SMART SM00866 86 225 1.0E-27 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 Gene3D G3DSA:1.10.10.10 3 61 1.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 Pfam PF07702 UTRA domain 87 218 4.3E-30 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 SUPERFAMILY SSF64288 53 229 8.01E-40 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 PANTHER PTHR11751:SF333 115 137 5.0E-22 T 22-04-2016 APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 65 2.1E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 SUPERFAMILY SSF46785 3 72 2.23E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 PANTHER PTHR11751 2 68 5.0E-22 T 22-04-2016 APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 9.1E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 9.1E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 Gene3D G3DSA:3.40.1410.10 62 228 3.7E-45 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 PANTHER PTHR11751:SF333 2 68 5.0E-22 T 22-04-2016 APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 SMART SM00345 6 65 2.6E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS08430 ec0fd0e13b11cf7462469579a60c2ff8 232 PANTHER PTHR11751 115 137 5.0E-22 T 22-04-2016 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 SUPERFAMILY SSF51905 265 381 1.94E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 SUPERFAMILY SSF51905 1 175 1.94E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 4.4E-14 T 22-04-2016 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 4.4E-14 T 22-04-2016 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 4.4E-14 T 22-04-2016 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.4E-14 T 22-04-2016 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 Gene3D G3DSA:3.50.50.60 266 354 1.5E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 Gene3D G3DSA:3.50.50.60 1 180 1.5E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 Pfam PF01494 FAD binding domain 2 336 6.4E-23 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 PANTHER PTHR13789 1 392 1.8E-213 T 22-04-2016 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 3.3E-143 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 3.8E-137 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APECO1_RS16490 21a3db79ef2fb09e88caa0963cdf785d 392 PANTHER PTHR13789:SF214 1 392 1.8E-213 T 22-04-2016 APECO1_RS23775 7dfb5efcb4ec3a70e7260ce9b2221f0a 385 Pfam PF00873 AcrB/AcrD/AcrF family 2 365 1.5E-132 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS23775 7dfb5efcb4ec3a70e7260ce9b2221f0a 385 PANTHER PTHR32063:SF13 4 384 3.3E-229 T 22-04-2016 APECO1_RS23775 7dfb5efcb4ec3a70e7260ce9b2221f0a 385 SUPERFAMILY SSF82714 61 147 2.62E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS23775 7dfb5efcb4ec3a70e7260ce9b2221f0a 385 SUPERFAMILY SSF82866 145 367 7.32E-45 T 22-04-2016 APECO1_RS23775 7dfb5efcb4ec3a70e7260ce9b2221f0a 385 Gene3D G3DSA:3.30.2090.10 60 147 7.0E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS23775 7dfb5efcb4ec3a70e7260ce9b2221f0a 385 PANTHER PTHR32063 4 384 3.3E-229 T 22-04-2016 APECO1_RS23775 7dfb5efcb4ec3a70e7260ce9b2221f0a 385 Gene3D G3DSA:1.10.3850.10 154 365 1.1E-54 T 22-04-2016 APECO1_RS05435 10e6a5a92adf47134b6341b00d782f03 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.0E-32 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APECO1_RS05435 10e6a5a92adf47134b6341b00d782f03 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 1.9E-20 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APECO1_RS05435 10e6a5a92adf47134b6341b00d782f03 251 SUPERFAMILY SSF117143 77 209 5.23E-17 T 22-04-2016 APECO1_RS05435 10e6a5a92adf47134b6341b00d782f03 251 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APECO1_RS05435 10e6a5a92adf47134b6341b00d782f03 251 PANTHER PTHR30435 1 251 3.3E-122 T 22-04-2016 APECO1_RS05435 10e6a5a92adf47134b6341b00d782f03 251 PANTHER PTHR30435:SF18 1 251 3.3E-122 T 22-04-2016 APECO1_RS05435 10e6a5a92adf47134b6341b00d782f03 251 Pfam PF00460 Flagella basal body rod protein 5 35 2.0E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APECO1_RS17680 669a6b9824a823a63bcfd4f45a3c000b 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.9E-162 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain APECO1_RS17680 669a6b9824a823a63bcfd4f45a3c000b 386 PANTHER PTHR30094:SF0 6 386 4.8E-167 T 22-04-2016 APECO1_RS17680 669a6b9824a823a63bcfd4f45a3c000b 386 PANTHER PTHR30094 6 386 4.8E-167 T 22-04-2016 APECO1_RS17680 669a6b9824a823a63bcfd4f45a3c000b 386 SUPERFAMILY SSF52440 174 279 3.16E-39 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS17680 669a6b9824a823a63bcfd4f45a3c000b 386 SUPERFAMILY SSF56059 1 168 3.53E-95 T 22-04-2016 APECO1_RS17680 669a6b9824a823a63bcfd4f45a3c000b 386 SUPERFAMILY SSF56059 266 383 3.53E-95 T 22-04-2016 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 Pfam PF00989 PAS fold 11 99 2.8E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 SMART SM00387 233 349 1.2E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 SMART SM00388 129 194 2.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 Gene3D G3DSA:1.10.287.130 129 186 1.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 Gene3D G3DSA:3.30.450.20 11 102 8.4E-21 T 22-04-2016 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 SUPERFAMILY SSF55874 198 346 3.67E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 4.9E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 SMART SM00091 7 75 4.0E-8 T 22-04-2016 IPR000014 PAS domain APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 PANTHER PTHR24423:SF488 11 349 2.6E-183 T 22-04-2016 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 3.6E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 SUPERFAMILY SSF47384 121 186 3.53E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 SUPERFAMILY SSF55785 11 104 9.18E-7 T 22-04-2016 IPR000014 PAS domain APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 PANTHER PTHR24423 11 349 2.6E-183 T 22-04-2016 APECO1_RS22105 b344b6a785d06cbd292c775fb8a0be84 349 Gene3D G3DSA:3.30.565.10 198 348 1.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02315 ddf54e2a1876bd2de0b1097122664d99 117 SUPERFAMILY SSF54909 1 116 1.2E-53 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS02315 ddf54e2a1876bd2de0b1097122664d99 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 2.5E-47 T 22-04-2016 IPR009874 Protein of unknown function DUF1428 APECO1_RS02315 ddf54e2a1876bd2de0b1097122664d99 117 PIRSF PIRSF007028 1 117 2.6E-56 T 22-04-2016 IPR009874 Protein of unknown function DUF1428 APECO1_RS02315 ddf54e2a1876bd2de0b1097122664d99 117 Gene3D G3DSA:3.30.70.900 1 116 2.3E-57 T 22-04-2016 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 Gene3D G3DSA:3.40.190.10 180 265 6.7E-7 T 22-04-2016 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 Gene3D G3DSA:1.10.10.10 5 84 2.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.3E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 Gene3D G3DSA:3.40.190.10 94 179 3.5E-19 T 22-04-2016 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 PANTHER PTHR30537 1 294 2.1E-187 T 22-04-2016 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 SUPERFAMILY SSF46785 4 82 1.32E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 SUPERFAMILY SSF53850 92 294 1.59E-43 T 22-04-2016 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 PANTHER PTHR30537:SF1 1 294 2.1E-187 T 22-04-2016 APECO1_RS01565 def0b8def9003e057cb643d6fec41688 297 Pfam PF03466 LysR substrate binding domain 90 294 1.1E-40 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS00285 a9c7061d1c81c37a0331cf001fae26b5 282 Gene3D G3DSA:3.60.21.10 1 132 1.0E-54 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS00285 a9c7061d1c81c37a0331cf001fae26b5 282 Gene3D G3DSA:3.60.21.10 169 267 1.0E-54 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS00285 a9c7061d1c81c37a0331cf001fae26b5 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 52.703 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APECO1_RS00285 a9c7061d1c81c37a0331cf001fae26b5 282 PIRSF PIRSF000903 1 275 1.4E-125 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APECO1_RS00285 a9c7061d1c81c37a0331cf001fae26b5 282 SUPERFAMILY SSF56300 1 259 1.3E-56 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS00285 a9c7061d1c81c37a0331cf001fae26b5 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 7.6E-168 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APECO1_RS00285 a9c7061d1c81c37a0331cf001fae26b5 282 Pfam PF00149 Calcineurin-like phosphoesterase 4 150 2.5E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS00285 a9c7061d1c81c37a0331cf001fae26b5 282 PANTHER PTHR24032 1 276 3.4E-183 T 22-04-2016 APECO1_RS00285 a9c7061d1c81c37a0331cf001fae26b5 282 PANTHER PTHR24032:SF27 1 276 3.4E-183 T 22-04-2016 APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 Pfam PF03473 MOSC domain 139 262 6.9E-32 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 Gene3D G3DSA:3.10.20.30 280 367 6.3E-21 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 SUPERFAMILY SSF50800 147 264 5.23E-18 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 SUPERFAMILY SSF50800 3 50 5.23E-18 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 Gene3D G3DSA:2.40.33.20 156 266 6.4E-5 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 SUPERFAMILY SSF141673 4 132 2.62E-27 T 22-04-2016 APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 SUPERFAMILY SSF54292 284 367 5.24E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 PANTHER PTHR14237 1 267 4.6E-101 T 22-04-2016 APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 3.0E-28 T 22-04-2016 IPR005303 MOSC, N-terminal beta barrel APECO1_RS04815 4788d5ac5fc1abfaa58112e222749a4a 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 296 362 2.6E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS03410 efc0efc642c6947dbfb22e493c44e203 169 PANTHER PTHR30087 11 167 1.8E-42 T 22-04-2016 APECO1_RS03410 efc0efc642c6947dbfb22e493c44e203 169 PANTHER PTHR30087:SF0 11 167 1.8E-42 T 22-04-2016 APECO1_RS03410 efc0efc642c6947dbfb22e493c44e203 169 Pfam PF08349 Protein of unknown function (DUF1722) 41 158 2.8E-35 T 22-04-2016 IPR013560 Domain of unknown function DUF1722 APECO1_RS18045 c362bc18531f52be122dfc634f765dfb 454 SUPERFAMILY SSF143548 16 158 1.46E-43 T 22-04-2016 IPR029009 Allosteric substrate binding domain APECO1_RS18045 c362bc18531f52be122dfc634f765dfb 454 Gene3D G3DSA:3.30.1330.90 10 157 2.9E-52 T 22-04-2016 IPR029009 Allosteric substrate binding domain APECO1_RS18045 c362bc18531f52be122dfc634f765dfb 454 Pfam PF03315 Serine dehydratase beta chain 3 155 3.8E-54 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APECO1_RS18045 c362bc18531f52be122dfc634f765dfb 454 PANTHER PTHR30182:SF5 1 453 1.9E-298 T 22-04-2016 APECO1_RS18045 c362bc18531f52be122dfc634f765dfb 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 7.1E-218 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APECO1_RS18045 c362bc18531f52be122dfc634f765dfb 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 3.4E-99 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APECO1_RS18045 c362bc18531f52be122dfc634f765dfb 454 PANTHER PTHR30182 1 453 1.9E-298 T 22-04-2016 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 438 4.0E-21 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 8.8E-89 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 PANTHER PTHR10196 1 472 0.0 T 22-04-2016 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 SUPERFAMILY SSF53067 254 467 5.02E-41 T 22-04-2016 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 Hamap MF_00986 L-fuculokinase [fucK]. 3 464 62.707 T 22-04-2016 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51|UniPathway: UPA00563 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 Gene3D G3DSA:3.30.420.40 254 468 5.9E-34 T 22-04-2016 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 SUPERFAMILY SSF53067 5 252 7.53E-62 T 22-04-2016 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 PANTHER PTHR10196:SF60 1 472 0.0 T 22-04-2016 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 Gene3D G3DSA:3.30.420.40 1 250 9.1E-56 T 22-04-2016 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 4 463 3.0E-254 T 22-04-2016 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51|UniPathway: UPA00563 APECO1_RS15895 65aceadc1a787f19879dfdd168604b65 472 PIRSF PIRSF000538 3 472 1.9E-84 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 TIGRFAM TIGR02120 GspF: type II secretion system protein F 3 397 2.4E-165 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 Pfam PF00482 Type II secretion system (T2SS), protein F 64 187 8.2E-30 T 22-04-2016 IPR018076 Type II secretion system F domain APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 Pfam PF00482 Type II secretion system (T2SS), protein F 268 387 5.6E-23 T 22-04-2016 IPR018076 Type II secretion system F domain APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 PANTHER PTHR30012:SF6 1 398 4.5E-259 T 22-04-2016 APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 5.1E-38 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 378 397 5.1E-38 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 362 376 5.1E-38 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 5.1E-38 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS19110 6013c6675086f5abec205fc42028f0f1 398 PANTHER PTHR30012 1 398 4.5E-259 T 22-04-2016 APECO1_RS21565 4bf1cdbae2d19dfc807b76d9e508291c 355 PANTHER PTHR10366 3 354 2.0E-188 T 22-04-2016 APECO1_RS21565 4bf1cdbae2d19dfc807b76d9e508291c 355 Gene3D G3DSA:3.40.50.720 1 192 1.3E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS21565 4bf1cdbae2d19dfc807b76d9e508291c 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 8.7E-164 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APECO1_RS21565 4bf1cdbae2d19dfc807b76d9e508291c 355 PANTHER PTHR10366:SF41 3 354 2.0E-188 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APECO1_RS21565 4bf1cdbae2d19dfc807b76d9e508291c 355 SUPERFAMILY SSF51735 1 339 7.01E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS21565 4bf1cdbae2d19dfc807b76d9e508291c 355 Gene3D G3DSA:3.90.25.10 193 344 3.5E-57 T 22-04-2016 APECO1_RS21565 4bf1cdbae2d19dfc807b76d9e508291c 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 3.7E-99 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS01850 42aa88b8937af3dbc7154b9a93528a6f 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 4.5E-22 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 APECO1_RS01850 42aa88b8937af3dbc7154b9a93528a6f 91 PANTHER PTHR33677 1 91 1.4E-30 T 22-04-2016 APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.6E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 PIRSF PIRSF000447 1 413 5.2E-206 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 PANTHER PTHR11712 3 412 1.1E-213 T 22-04-2016 APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 Gene3D G3DSA:3.40.47.10 2 260 1.1E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 Gene3D G3DSA:3.40.47.10 263 412 1.1E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 SMART SM00825 Beta-ketoacyl synthase 6 413 9.7E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 SUPERFAMILY SSF53901 215 412 1.54E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.5E-63 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.6E-196 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APECO1_RS05525 401689333e60d09779c2ba651ccf31a1 413 SUPERFAMILY SSF53901 3 252 7.02E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS18570 67926e1c52fd4e82570dffac7eddf8f4 375 Gene3D G3DSA:3.40.50.300 67 184 4.5E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18570 67926e1c52fd4e82570dffac7eddf8f4 375 PANTHER PTHR12169:SF11 1 373 6.3E-212 T 22-04-2016 APECO1_RS18570 67926e1c52fd4e82570dffac7eddf8f4 375 SUPERFAMILY SSF52540 70 209 1.64E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18570 67926e1c52fd4e82570dffac7eddf8f4 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 374 53.911 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 APECO1_RS18570 67926e1c52fd4e82570dffac7eddf8f4 375 Pfam PF03969 AFG1-like ATPase 4 371 9.2E-170 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 APECO1_RS18570 67926e1c52fd4e82570dffac7eddf8f4 375 PANTHER PTHR12169 1 373 6.3E-212 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 APECO1_RS18070 994df575ca9a00e2f723808a842887e5 329 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 7.0E-116 T 22-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 APECO1_RS18070 994df575ca9a00e2f723808a842887e5 329 PANTHER PTHR10314 9 323 3.8E-150 T 22-04-2016 APECO1_RS18070 994df575ca9a00e2f723808a842887e5 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APECO1_RS18070 994df575ca9a00e2f723808a842887e5 329 SUPERFAMILY SSF53686 11 321 1.31E-93 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS18070 994df575ca9a00e2f723808a842887e5 329 PANTHER PTHR10314:SF17 9 323 3.8E-150 T 22-04-2016 APECO1_RS18070 994df575ca9a00e2f723808a842887e5 329 Gene3D G3DSA:3.40.50.1100 76 323 1.5E-76 T 22-04-2016 APECO1_RS18070 994df575ca9a00e2f723808a842887e5 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 312 4.9E-78 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 PANTHER PTHR11019 27 287 5.8E-152 T 22-04-2016 APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 SMART SM00342 196 279 1.2E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 SUPERFAMILY SSF46689 232 284 2.55E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 Gene3D G3DSA:2.60.120.10 30 89 4.2E-9 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 Pfam PF02311 AraC-like ligand binding domain 27 157 7.3E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 SUPERFAMILY SSF46689 179 230 3.9E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 PANTHER PTHR11019:SF127 27 287 5.8E-152 T 22-04-2016 APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 SUPERFAMILY SSF51182 21 94 4.6E-10 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 Gene3D G3DSA:1.10.10.60 181 232 2.7E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 Pfam PF12833 Helix-turn-helix domain 202 281 1.7E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS09100 94e4f6b489fc700729aed6140ce17f87 303 Gene3D G3DSA:1.10.10.60 233 283 5.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS06830 e7bff482e0b6e09b035fa558aa66d7f9 642 PANTHER PTHR34413 1 641 6.8E-296 T 22-04-2016 APECO1_RS06830 e7bff482e0b6e09b035fa558aa66d7f9 642 Pfam PF05876 Phage terminase large subunit (GpA) 39 601 1.0E-160 T 22-04-2016 IPR008866 Bacteriophage lambda, GpA APECO1_RS06830 e7bff482e0b6e09b035fa558aa66d7f9 642 PANTHER PTHR34413:SF2 1 641 6.8E-296 T 22-04-2016 APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 183 4.4E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 PANTHER PTHR18901 1 220 8.8E-61 T 22-04-2016 APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.0E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.0E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.0E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 Gene3D G3DSA:1.10.150.240 20 85 5.5E-5 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 PANTHER PTHR18901:SF2 1 220 8.8E-61 T 22-04-2016 APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 SUPERFAMILY SSF56784 4 212 8.27E-45 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 3.7E-22 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 Gene3D G3DSA:3.40.50.1000 88 212 3.2E-32 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21220 cddf4e4ca320900543e0c88d64579d89 221 Gene3D G3DSA:3.40.50.1000 2 19 3.2E-32 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 366 5.0E-227 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 SMART SM00859 3 122 2.2E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 PANTHER PTHR10174:SF116 201 366 2.7E-160 T 22-04-2016 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 PANTHER PTHR10174:SF116 103 179 2.7E-160 T 22-04-2016 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 34.33 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 PIRSF PIRSF000148 1 367 3.1E-71 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 6.8E-61 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 Gene3D G3DSA:3.30.360.10 143 350 5.2E-77 T 22-04-2016 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 SUPERFAMILY SSF51735 1 147 1.06E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 Gene3D G3DSA:3.40.50.720 1 142 1.3E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 PANTHER PTHR10174 201 366 2.7E-160 T 22-04-2016 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 PANTHER PTHR10174 103 179 2.7E-160 T 22-04-2016 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 4.6E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APECO1_RS19665 6deebede2d14ede69959fe739f433218 367 SUPERFAMILY SSF55347 134 354 8.93E-79 T 22-04-2016 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 Gene3D G3DSA:3.90.600.10 330 424 1.3E-36 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 SUPERFAMILY SSF52440 1 103 1.73E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 6.8E-84 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 SMART SM01209 103 296 8.6E-144 T 22-04-2016 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 Gene3D G3DSA:3.30.470.20 191 328 4.1E-65 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 1.1E-190 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 3.2E-30 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 PANTHER PTHR10520 1 427 3.0E-303 T 22-04-2016 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 Gene3D G3DSA:3.40.50.20 2 95 1.5E-38 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 SMART SM01210 330 424 1.7E-57 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 Gene3D G3DSA:3.30.1490.20 121 190 6.2E-34 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 44.175 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.2E-36 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 SUPERFAMILY SSF56059 104 325 1.48E-70 T 22-04-2016 APECO1_RS22835 91a46fa5c9e84a85b22c072bb3a76bc7 429 SUPERFAMILY SSF51246 329 424 7.85E-34 T 22-04-2016 IPR011054 Rudiment single hybrid motif APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 TIGRFAM TIGR00191 thrB: homoserine kinase 2 309 1.3E-122 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 Gene3D G3DSA:3.30.70.890 169 298 6.3E-41 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 Pfam PF00288 GHMP kinases N terminal domain 85 150 7.1E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 PIRSF PIRSF000676 1 310 4.1E-87 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 Pfam PF08544 GHMP kinases C terminal 212 281 6.6E-10 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 Gene3D G3DSA:3.30.230.10 1 164 2.6E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 SUPERFAMILY SSF55060 172 289 2.88E-33 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 PANTHER PTHR20861:SF1 1 310 4.4E-132 T 22-04-2016 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 PANTHER PTHR20861 1 310 4.4E-132 T 22-04-2016 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 SUPERFAMILY SSF54211 1 162 2.2E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 31.0 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 9 24 3.7E-34 T 22-04-2016 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 137 150 3.7E-34 T 22-04-2016 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 254 269 3.7E-34 T 22-04-2016 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 175 192 3.7E-34 T 22-04-2016 APECO1_RS00015 76c455e312bbc25a609543bc830a44a2 310 PRINTS PR00958 Homoserine kinase signature 97 112 3.7E-34 T 22-04-2016 APECO1_RS13770 06ee2049e8fe89cf0954a640293fa532 159 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 144 7.4E-59 T 22-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 APECO1_RS13770 06ee2049e8fe89cf0954a640293fa532 159 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 143 5.6E-30 T 22-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 APECO1_RS13770 06ee2049e8fe89cf0954a640293fa532 159 PANTHER PTHR40453:SF1 2 149 1.4E-47 T 22-04-2016 APECO1_RS13770 06ee2049e8fe89cf0954a640293fa532 159 SUPERFAMILY SSF52540 3 148 3.55E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS13770 06ee2049e8fe89cf0954a640293fa532 159 PANTHER PTHR40453 2 149 1.4E-47 T 22-04-2016 APECO1_RS13770 06ee2049e8fe89cf0954a640293fa532 159 PIRSF PIRSF036409 1 148 4.5E-59 T 22-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 APECO1_RS13770 06ee2049e8fe89cf0954a640293fa532 159 Gene3D G3DSA:3.40.50.300 3 154 1.1E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23840 97727167edaec900a23accc43f56a582 191 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 3 183 1.5E-45 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 APECO1_RS23840 97727167edaec900a23accc43f56a582 191 Pfam PF01965 DJ-1/PfpI family 2 183 7.7E-46 T 22-04-2016 IPR002818 DJ-1/PfpI APECO1_RS23840 97727167edaec900a23accc43f56a582 191 PANTHER PTHR11019:SF112 2 92 6.9E-50 T 22-04-2016 APECO1_RS23840 97727167edaec900a23accc43f56a582 191 PANTHER PTHR11019:SF112 110 191 6.9E-50 T 22-04-2016 APECO1_RS23840 97727167edaec900a23accc43f56a582 191 SUPERFAMILY SSF52317 1 184 5.77E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS23840 97727167edaec900a23accc43f56a582 191 PANTHER PTHR11019 2 92 6.9E-50 T 22-04-2016 APECO1_RS23840 97727167edaec900a23accc43f56a582 191 PANTHER PTHR11019 110 191 6.9E-50 T 22-04-2016 APECO1_RS23840 97727167edaec900a23accc43f56a582 191 Gene3D G3DSA:3.40.50.880 1 185 7.6E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS08755 81d89c8e6abc477080f452f53b49a4b5 206 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 26.887 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APECO1_RS08755 81d89c8e6abc477080f452f53b49a4b5 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 1.6E-69 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APECO1_RS08755 81d89c8e6abc477080f452f53b49a4b5 206 Pfam PF04205 FMN-binding domain 99 187 2.9E-19 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APECO1_RS08755 81d89c8e6abc477080f452f53b49a4b5 206 PIRSF PIRSF006091 1 203 8.0E-71 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APECO1_RS08755 81d89c8e6abc477080f452f53b49a4b5 206 PANTHER PTHR36118 1 206 7.0E-82 T 22-04-2016 APECO1_RS08755 81d89c8e6abc477080f452f53b49a4b5 206 SMART SM00900 99 191 5.7E-37 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APECO1_RS08755 81d89c8e6abc477080f452f53b49a4b5 206 PANTHER PTHR36118:SF1 1 206 7.0E-82 T 22-04-2016 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 2.2E-166 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 Pfam PF01235 Sodium:alanine symporter family 52 453 1.2E-142 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 PANTHER PTHR30330:SF1 1 473 1.1E-278 T 22-04-2016 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 1.3E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.3E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.3E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.3E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.3E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 1.3E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS00040 0d66161f0f5c67163cf01d5d74d636fe 476 PANTHER PTHR30330 1 473 1.1E-278 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APECO1_RS03235 958ba29334f789f470d07397b634d739 406 SUPERFAMILY SSF46785 14 79 5.25E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03235 958ba29334f789f470d07397b634d739 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 22-04-2016 IPR000600 ROK family APECO1_RS03235 958ba29334f789f470d07397b634d739 406 PANTHER PTHR18964:SF128 306 403 1.7E-223 T 22-04-2016 APECO1_RS03235 958ba29334f789f470d07397b634d739 406 PANTHER PTHR18964:SF128 64 289 1.7E-223 T 22-04-2016 APECO1_RS03235 958ba29334f789f470d07397b634d739 406 Pfam PF00480 ROK family 89 392 2.4E-102 T 22-04-2016 IPR000600 ROK family APECO1_RS03235 958ba29334f789f470d07397b634d739 406 PANTHER PTHR18964 306 403 1.7E-223 T 22-04-2016 APECO1_RS03235 958ba29334f789f470d07397b634d739 406 PANTHER PTHR18964 64 289 1.7E-223 T 22-04-2016 APECO1_RS03235 958ba29334f789f470d07397b634d739 406 SUPERFAMILY SSF53067 88 394 8.64E-56 T 22-04-2016 APECO1_RS03235 958ba29334f789f470d07397b634d739 406 Pfam PF01047 MarR family 25 63 5.5E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS03235 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:1.10.10.10 14 79 2.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03235 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:3.30.420.40 85 224 2.4E-34 T 22-04-2016 APECO1_RS03235 958ba29334f789f470d07397b634d739 406 Gene3D G3DSA:3.30.420.40 225 376 1.0E-47 T 22-04-2016 APECO1_RS16205 ec3710bdce58c83c1c423dbf2ef76d99 237 PANTHER PTHR30060:SF1 1 236 1.5E-120 T 22-04-2016 APECO1_RS16205 ec3710bdce58c83c1c423dbf2ef76d99 237 Pfam PF03741 Integral membrane protein TerC family 17 203 2.1E-52 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APECO1_RS16205 ec3710bdce58c83c1c423dbf2ef76d99 237 PANTHER PTHR30060 1 236 1.5E-120 T 22-04-2016 APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 PANTHER PTHR30328 8 220 1.9E-60 T 22-04-2016 APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 Pfam PF09209 Domain of unknown function (DUF1956) 96 218 1.1E-37 T 22-04-2016 IPR015292 Transcription regulator YbiH, C-terminal APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 SUPERFAMILY SSF48498 90 219 1.78E-36 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 Gene3D G3DSA:1.10.10.60 4 53 5.9E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 SUPERFAMILY SSF46689 4 82 5.64E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 Gene3D G3DSA:1.10.357.10 54 222 1.3E-74 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS03860 eb17600dde29ca9290bdba8adce54c62 223 PANTHER PTHR30328:SF8 8 220 1.9E-60 T 22-04-2016 APECO1_RS11010 295641ede781e295862bfc9690fef22f 344 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 18 26 - T 22-04-2016 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 APECO1_RS11010 295641ede781e295862bfc9690fef22f 344 PANTHER PTHR10819 1 343 8.6E-125 T 22-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 APECO1_RS11010 295641ede781e295862bfc9690fef22f 344 SUPERFAMILY SSF51556 72 343 1.06E-72 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS11010 295641ede781e295862bfc9690fef22f 344 SUPERFAMILY SSF51556 3 45 1.06E-72 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS11010 295641ede781e295862bfc9690fef22f 344 Pfam PF02126 Phosphotriesterase family 14 343 1.4E-46 T 22-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 APECO1_RS11010 295641ede781e295862bfc9690fef22f 344 PANTHER PTHR10819:SF0 1 343 8.6E-125 T 22-04-2016 APECO1_RS11010 295641ede781e295862bfc9690fef22f 344 Gene3D G3DSA:3.20.20.140 4 343 8.6E-98 T 22-04-2016 APECO1_RS11195 ac15aa0045fecc85d8b390c1bd5bd020 75 PANTHER PTHR33279 1 74 3.4E-47 T 22-04-2016 APECO1_RS11195 ac15aa0045fecc85d8b390c1bd5bd020 75 SUPERFAMILY SSF64307 3 74 6.02E-21 T 22-04-2016 IPR001455 TusA-like domain APECO1_RS11195 ac15aa0045fecc85d8b390c1bd5bd020 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 22-04-2016 IPR001455 TusA-like domain APECO1_RS11195 ac15aa0045fecc85d8b390c1bd5bd020 75 Pfam PF01206 Sulfurtransferase TusA 4 74 1.9E-18 T 22-04-2016 IPR001455 TusA-like domain APECO1_RS11195 ac15aa0045fecc85d8b390c1bd5bd020 75 PANTHER PTHR33279:SF4 1 74 3.4E-47 T 22-04-2016 APECO1_RS11195 ac15aa0045fecc85d8b390c1bd5bd020 75 Gene3D G3DSA:3.30.110.40 3 74 1.1E-22 T 22-04-2016 IPR001455 TusA-like domain APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 Gene3D G3DSA:1.10.860.10 27 129 5.8E-42 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 SMART SM00382 223 429 5.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 Pfam PF00772 DnaB-like helicase N terminal domain 27 128 3.0E-37 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 27 464 4.1E-175 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 SUPERFAMILY SSF48024 25 136 1.23E-39 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 Pfam PF03796 DnaB-like helicase C terminal domain 206 462 1.9E-113 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 PANTHER PTHR30153 11 471 1.3E-226 T 22-04-2016 APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 SUPERFAMILY SSF52540 204 275 1.97E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 SUPERFAMILY SSF52540 302 456 1.97E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23135 e308b06afbdefb83ffe100b5332f471d 471 Gene3D G3DSA:3.40.50.300 192 464 3.7E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20065 43811399a03104b76be0cebb306864f9 342 Gene3D G3DSA:3.40.1570.10 191 336 7.4E-12 T 22-04-2016 APECO1_RS20065 43811399a03104b76be0cebb306864f9 342 Gene3D G3DSA:3.40.1570.10 9 155 1.3E-9 T 22-04-2016 APECO1_RS20065 43811399a03104b76be0cebb306864f9 342 SUPERFAMILY SSF144064 2 336 1.37E-131 T 22-04-2016 APECO1_RS20065 43811399a03104b76be0cebb306864f9 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 27 155 1.5E-41 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 APECO1_RS20065 43811399a03104b76be0cebb306864f9 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 204 335 1.5E-41 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 PANTHER PTHR11732 1 283 1.4E-148 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 Gene3D G3DSA:3.20.20.100 2 263 1.8E-99 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 3.5E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 3.5E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 3.5E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 3.5E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 3.5E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 PANTHER PTHR11732:SF236 1 283 1.4E-148 T 22-04-2016 APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 SUPERFAMILY SSF51430 3 262 1.44E-89 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01575 39794a9c961c311cc3f87c707ca56618 283 Pfam PF00248 Aldo/keto reductase family 15 257 8.8E-47 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 SUPERFAMILY SSF55021 815 874 4.2E-9 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 SUPERFAMILY SSF55021 705 761 5.83E-9 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 PIRSF PIRSF006288 26 889 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Pfam PF01842 ACT domain 817 874 1.2E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Pfam PF01842 ACT domain 709 758 4.7E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Pfam PF01966 HD domain 468 601 1.4E-14 T 22-04-2016 IPR006674 HD domain APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Gene3D G3DSA:3.30.460.10 87 181 4.3E-7 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 PANTHER PTHR13734:SF45 109 704 4.7E-165 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Gene3D G3DSA:3.30.70.260 816 867 1.1E-7 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Gene3D G3DSA:3.30.70.260 708 769 4.1E-4 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Pfam PF08335 GlnD PII-uridylyltransferase 193 331 1.9E-36 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Pfam PF01909 Nucleotidyltransferase domain 86 137 9.7E-7 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 SMART SM00471 464 611 3.1E-12 T 22-04-2016 IPR003607 HD/PDEase domain APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 SUPERFAMILY SSF109604 446 628 8.0E-13 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 PANTHER PTHR13734 109 704 4.7E-165 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Gene3D G3DSA:1.10.3210.10 438 630 2.4E-28 T 22-04-2016 IPR006674 HD domain APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 SUPERFAMILY SSF81301 37 189 2.13E-21 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 SUPERFAMILY SSF81593 213 328 1.18E-9 T 22-04-2016 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 51 884 3.4E-303 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APECO1_RS00885 8575e25f188ec3ea074e5b02941506ea 890 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 890 349.505 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APECO1_RS09785 199532f8de1d7294534cc583f0b80974 263 SUPERFAMILY SSF46785 13 86 1.43E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS09785 199532f8de1d7294534cc583f0b80974 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 2.2E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS09785 199532f8de1d7294534cc583f0b80974 263 PANTHER PTHR30136 4 263 3.3E-133 T 22-04-2016 APECO1_RS09785 199532f8de1d7294534cc583f0b80974 263 SUPERFAMILY SSF55781 77 259 7.19E-56 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS09785 199532f8de1d7294534cc583f0b80974 263 Gene3D G3DSA:1.10.10.10 12 85 1.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS09785 199532f8de1d7294534cc583f0b80974 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 2.1E-48 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APECO1_RS09785 199532f8de1d7294534cc583f0b80974 263 PANTHER PTHR30136:SF7 4 263 3.3E-133 T 22-04-2016 APECO1_RS09785 199532f8de1d7294534cc583f0b80974 263 SMART SM00346 13 102 8.0E-36 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS09785 199532f8de1d7294534cc583f0b80974 263 Gene3D G3DSA:3.30.450.40 86 261 1.1E-70 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS16780 d3e155df63b4b26d95a6a761b36e6453 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APECO1_RS16780 d3e155df63b4b26d95a6a761b36e6453 91 PIRSF PIRSF029827 1 90 1.3E-44 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APECO1_RS16780 d3e155df63b4b26d95a6a761b36e6453 91 Gene3D G3DSA:1.10.3880.10 1 90 3.9E-44 T 22-04-2016 APECO1_RS16780 d3e155df63b4b26d95a6a761b36e6453 91 PANTHER PTHR36965 2 91 1.5E-55 T 22-04-2016 APECO1_RS16780 d3e155df63b4b26d95a6a761b36e6453 91 PANTHER PTHR36965:SF1 2 91 1.5E-55 T 22-04-2016 APECO1_RS16780 d3e155df63b4b26d95a6a761b36e6453 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.992 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APECO1_RS16780 d3e155df63b4b26d95a6a761b36e6453 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 2.0E-40 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APECO1_RS16780 d3e155df63b4b26d95a6a761b36e6453 91 SUPERFAMILY SSF111148 1 90 1.44E-40 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APECO1_RS06405 86d4300aad211795faf1879cd9a40a7f 207 PANTHER PTHR30634 1 207 1.6E-70 T 22-04-2016 APECO1_RS06405 86d4300aad211795faf1879cd9a40a7f 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.594 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APECO1_RS06405 86d4300aad211795faf1879cd9a40a7f 207 SUPERFAMILY SSF89392 31 206 2.75E-56 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APECO1_RS06405 86d4300aad211795faf1879cd9a40a7f 207 Gene3D G3DSA:2.50.20.10 14 206 4.5E-71 T 22-04-2016 APECO1_RS06405 86d4300aad211795faf1879cd9a40a7f 207 Pfam PF03550 Outer membrane lipoprotein LolB 50 204 1.9E-49 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APECO1_RS06405 86d4300aad211795faf1879cd9a40a7f 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 5 206 5.7E-99 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APECO1_RS06405 86d4300aad211795faf1879cd9a40a7f 207 PANTHER PTHR30634:SF11 1 207 1.6E-70 T 22-04-2016 APECO1_RS12730 f90d60219db6a32804d897d57c9f691e 405 PANTHER PTHR11751:SF303 9 399 4.3E-200 T 22-04-2016 APECO1_RS12730 f90d60219db6a32804d897d57c9f691e 405 SUPERFAMILY SSF53383 7 401 4.17E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS12730 f90d60219db6a32804d897d57c9f691e 405 Gene3D G3DSA:3.40.640.10 51 279 2.3E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS12730 f90d60219db6a32804d897d57c9f691e 405 PANTHER PTHR11751 9 399 4.3E-200 T 22-04-2016 APECO1_RS12730 f90d60219db6a32804d897d57c9f691e 405 Gene3D G3DSA:3.90.1150.10 280 403 9.3E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS12730 f90d60219db6a32804d897d57c9f691e 405 Pfam PF00155 Aminotransferase class I and II 58 387 8.6E-47 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS16665 88088e38ebc087bb6ab72122d1f7bbf1 71 ProDom PD056256 YQGC CYTOPLASMIC 1 51 5.0E-16 T 22-04-2016 IPR020102 Uncharacterised protein family YqgC APECO1_RS13040 bb96e19798b331518234362d96bcfff9 300 PRINTS PR01994 Antirepressor protein ANT signature 77 100 4.5E-28 T 22-04-2016 IPR018875 Antirepressor protein ANT, N-terminal APECO1_RS13040 bb96e19798b331518234362d96bcfff9 300 PRINTS PR01994 Antirepressor protein ANT signature 101 123 4.5E-28 T 22-04-2016 IPR018875 Antirepressor protein ANT, N-terminal APECO1_RS13040 bb96e19798b331518234362d96bcfff9 300 PRINTS PR01994 Antirepressor protein ANT signature 32 53 4.5E-28 T 22-04-2016 IPR018875 Antirepressor protein ANT, N-terminal APECO1_RS13040 bb96e19798b331518234362d96bcfff9 300 Pfam PF10548 P22AR C-terminal domain 200 272 5.0E-27 T 22-04-2016 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal APECO1_RS13040 bb96e19798b331518234362d96bcfff9 300 Pfam PF10547 P22_AR N-terminal domain 14 125 5.9E-44 T 22-04-2016 IPR018875 Antirepressor protein ANT, N-terminal APECO1_RS25070 396520ad858b993baef75b7c3956bf07 304 PANTHER PTHR30015 2 304 1.6E-97 T 22-04-2016 APECO1_RS25070 396520ad858b993baef75b7c3956bf07 304 Gene3D G3DSA:3.40.1350.10 159 285 1.0E-18 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APECO1_RS25070 396520ad858b993baef75b7c3956bf07 304 PANTHER PTHR30015:SF4 2 304 1.6E-97 T 22-04-2016 APECO1_RS25070 396520ad858b993baef75b7c3956bf07 304 SUPERFAMILY SSF52980 168 283 2.41E-18 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APECO1_RS25070 396520ad858b993baef75b7c3956bf07 304 Pfam PF14338 Mrr N-terminal domain 6 91 1.1E-19 T 22-04-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain APECO1_RS25070 396520ad858b993baef75b7c3956bf07 304 Pfam PF04471 Restriction endonuclease 164 281 2.5E-37 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 APECO1_RS02780 c4af6b2f628f68b91edece08f2f35a29 415 PANTHER PTHR30414 1 415 3.5E-220 T 22-04-2016 APECO1_RS02780 c4af6b2f628f68b91edece08f2f35a29 415 Pfam PF00924 Mechanosensitive ion channel 142 396 8.1E-72 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APECO1_RS02780 c4af6b2f628f68b91edece08f2f35a29 415 SUPERFAMILY SSF82689 317 395 1.19E-6 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APECO1_RS02780 c4af6b2f628f68b91edece08f2f35a29 415 SUPERFAMILY SSF50182 187 253 4.58E-12 T 22-04-2016 IPR010920 LSM domain APECO1_RS02780 c4af6b2f628f68b91edece08f2f35a29 415 Gene3D G3DSA:3.30.70.100 323 389 8.9E-4 T 22-04-2016 APECO1_RS02780 c4af6b2f628f68b91edece08f2f35a29 415 PANTHER PTHR30414:SF0 1 415 3.5E-220 T 22-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 APECO1_RS02780 c4af6b2f628f68b91edece08f2f35a29 415 Gene3D G3DSA:2.30.30.60 203 252 9.1E-9 T 22-04-2016 APECO1_RS17430 859109af718ec4c68d957d9515e2445e 295 SUPERFAMILY SSF53474 70 294 3.1E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS17430 859109af718ec4c68d957d9515e2445e 295 PANTHER PTHR17630 67 295 1.6E-63 T 22-04-2016 APECO1_RS17430 859109af718ec4c68d957d9515e2445e 295 Pfam PF01738 Dienelactone hydrolase family 85 294 6.8E-50 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 APECO1_RS17430 859109af718ec4c68d957d9515e2445e 295 Gene3D G3DSA:3.40.50.1820 70 294 6.6E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS17430 859109af718ec4c68d957d9515e2445e 295 PANTHER PTHR17630:SF32 67 295 1.6E-63 T 22-04-2016 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 314 332 1.3E-17 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 399 414 1.3E-17 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 283 297 1.3E-17 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 91 106 1.3E-17 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 498 513 1.3E-17 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 274 593 2.6E-111 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 SUPERFAMILY SSF49785 1 180 5.1E-58 T 22-04-2016 IPR008979 Galactose-binding domain-like APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 Gene3D G3DSA:2.60.120.260 2 180 2.5E-58 T 22-04-2016 IPR008979 Galactose-binding domain-like APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 SUPERFAMILY SSF51445 274 590 5.8E-85 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 399 413 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 Gene3D G3DSA:2.60.40.320 182 273 6.6E-27 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 PANTHER PTHR10066 1 588 3.3E-301 T 22-04-2016 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 PANTHER PTHR10066:SF67 1 588 3.3E-301 T 22-04-2016 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 Gene3D G3DSA:3.20.20.80 275 589 1.3E-79 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 SUPERFAMILY SSF49303 182 273 5.18E-20 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 324 349 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 Pfam PF00703 Glycosyl hydrolases family 2 184 272 1.8E-7 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APECO1_RS08680 877bc98fb91cc2994994e722a96b2a0a 603 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 12 180 5.5E-66 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 2.1E-95 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 9.4E-164 T 22-04-2016 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 71 84 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 PANTHER PTHR30304:SF5 1 284 4.0E-164 T 22-04-2016 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 PANTHER PTHR30304 1 284 4.0E-164 T 22-04-2016 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 Hamap MF_01293 D-tagatose-1,6-bisphosphate aldolase subunit KbaY [kbaY]. 1 286 77.607 T 22-04-2016 IPR023788 D-tagatose-bisphosphate aldolase, class II, subunit KbaY GO:0005975|GO:0008270|GO:0009025|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 4.5E-111 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 PIRSF PIRSF001359 1 284 1.0E-114 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 Gene3D G3DSA:3.20.20.70 1 284 1.7E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS18150 a514fa9e4b4a12f2acbee366f3c2ef85 286 SUPERFAMILY SSF51569 3 283 1.61E-96 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 SUPERFAMILY SSF82693 271 328 6.02E-21 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 SUPERFAMILY SSF82693 137 184 6.02E-21 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 PANTHER PTHR32063 2 1047 0.0 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 Pfam PF00873 AcrB/AcrD/AcrF family 6 1037 5.4E-237 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 SUPERFAMILY SSF82714 723 808 9.16E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 Gene3D G3DSA:3.30.70.1430 46 141 7.9E-26 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 Gene3D G3DSA:1.10.3850.10 815 1038 1.4E-48 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 Gene3D G3DSA:1.10.3850.10 275 507 6.9E-68 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 SUPERFAMILY SSF82866 294 506 5.89E-41 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1047 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 SUPERFAMILY SSF82866 806 1039 1.83E-43 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 SUPERFAMILY SSF82693 46 126 2.2E-20 T 22-04-2016 APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 SUPERFAMILY SSF82714 186 269 5.89E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 Gene3D G3DSA:3.30.2090.10 724 807 2.2E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 Gene3D G3DSA:3.30.2090.10 185 269 7.1E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS02770 87002eaf7f0dc1ea5efab3c56b4a5e4a 1047 PANTHER PTHR32063:SF19 2 1047 0.0 T 22-04-2016 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 Pfam PF01588 Putative tRNA binding domain 581 674 4.9E-22 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 Gene3D G3DSA:2.40.50.140 568 677 9.8E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 1.2E-48 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 Gene3D G3DSA:2.20.28.20 145 176 1.5E-19 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 SUPERFAMILY SSF47323 391 548 2.24E-47 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 SUPERFAMILY SSF57770 142 176 1.15E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 SUPERFAMILY SSF52374 176 388 3.92E-107 T 22-04-2016 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 SUPERFAMILY SSF52374 6 141 3.92E-107 T 22-04-2016 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 PANTHER PTHR11946:SF86 6 632 4.7E-259 T 22-04-2016 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 Gene3D G3DSA:3.40.50.620 6 144 1.2E-93 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 Gene3D G3DSA:3.40.50.620 183 385 1.2E-93 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 SUPERFAMILY SSF50249 570 676 1.64E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 2.0E-210 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 2.7E-165 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.939 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 5.8E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 5.8E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 5.8E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 5.8E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 5.8E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 5.8E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 Gene3D G3DSA:1.10.730.10 391 526 9.3E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS11835 aa52bccf26bdd05c48f2c586fcf2f2d9 677 PANTHER PTHR11946 6 632 4.7E-259 T 22-04-2016 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 SUPERFAMILY SSF52490 12 207 1.7E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 3.8E-37 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 PANTHER PTHR30314 1 381 1.5E-207 T 22-04-2016 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.52E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.52E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.52E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.52E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 PANTHER PTHR30314:SF3 1 381 1.5E-207 T 22-04-2016 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.9E-42 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 SMART SM00865 206 324 3.4E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.188 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 SUPERFAMILY SSF55307 203 319 7.33E-43 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 Gene3D G3DSA:3.30.1330.20 214 321 4.3E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 338 4.5E-142 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 Gene3D G3DSA:3.40.50.1440 13 213 2.5E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APECO1_RS00515 c16a16e243d432912840fefd5939be2e 383 SMART SM00864 12 204 3.3E-111 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APECO1_RS10345 2bbf870011ec275fb2f4931176fe8553 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 104 17.94 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APECO1_RS10345 2bbf870011ec275fb2f4931176fe8553 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 104 3.7E-42 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APECO1_RS10345 2bbf870011ec275fb2f4931176fe8553 104 PANTHER PTHR34653 1 104 2.1E-28 T 22-04-2016 APECO1_RS10345 2bbf870011ec275fb2f4931176fe8553 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 104 2.0E-27 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APECO1_RS10345 2bbf870011ec275fb2f4931176fe8553 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 2.6E-22 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APECO1_RS10345 2bbf870011ec275fb2f4931176fe8553 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 2.6E-22 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APECO1_RS10345 2bbf870011ec275fb2f4931176fe8553 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 2.6E-22 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 SMART SM01130 1 290 1.4E-141 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 4.7E-126 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 SUPERFAMILY SSF51569 1 292 1.0E-99 T 22-04-2016 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 PANTHER PTHR12128 1 292 4.6E-149 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.9E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.9E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.9E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.9E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 PANTHER PTHR12128:SF34 1 292 4.6E-149 T 22-04-2016 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 3.4E-127 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 Gene3D G3DSA:3.20.20.70 1 292 8.4E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.636 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 PIRSF PIRSF001365 1 292 1.7E-98 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS13870 bb329795a06092d7524eb26961f2fade 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 908 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 Pfam PF02779 Transketolase, pyrimidine binding domain 568 761 1.6E-60 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 Gene3D G3DSA:3.40.50.970 140 512 3.1E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 PIRSF PIRSF000157 1 911 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 Pfam PF00676 Dehydrogenase E1 component 182 495 1.7E-49 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 PANTHER PTHR23152:SF4 11 914 0.0 T 22-04-2016 APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 SUPERFAMILY SSF52518 552 769 3.73E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 Gene3D G3DSA:3.40.50.970 567 769 1.8E-20 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 SUPERFAMILY SSF52518 141 512 1.37E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 767 909 4.3E-47 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 PANTHER PTHR23152 11 914 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APECO1_RS23160 a7687e7247e5f54f1057e1d0baf9a12a 914 SMART SM00861 569 762 1.0E-50 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 SMART SM00316 642 725 5.2E-17 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 8.7E-290 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 Pfam PF00575 S1 RNA binding domain 641 724 2.1E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 PANTHER PTHR23355 1 811 0.0 T 22-04-2016 APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 58.082 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 Pfam PF08461 Ribonuclease R winged-helix domain 23 83 3.4E-13 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 SMART SM00357 86 145 2.1E-16 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 Gene3D G3DSA:2.40.50.140 644 734 1.4E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 SUPERFAMILY SSF50249 138 235 1.03E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 Pfam PF08206 Ribonuclease B OB domain 87 144 4.2E-22 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 Pfam PF08206 Ribonuclease B OB domain 158 213 8.4E-5 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 SUPERFAMILY SSF50249 221 641 1.03E-143 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 Pfam PF00773 RNB domain 260 587 5.6E-111 T 22-04-2016 APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 SUPERFAMILY SSF50249 67 145 8.01E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 SUPERFAMILY SSF50249 644 724 1.5E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 PANTHER PTHR23355:SF9 1 811 0.0 T 22-04-2016 APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 SMART SM00955 260 588 4.9E-187 T 22-04-2016 APECO1_RS24300 0592a5bad0b827512d532dabfb7600dc 813 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 2.0E-292 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APECO1_RS10515 ddb53413ff0755cf11320034ae64ff5a 216 Gene3D G3DSA:2.40.128.20 30 216 1.9E-86 T 22-04-2016 IPR012674 Calycin APECO1_RS10515 ddb53413ff0755cf11320034ae64ff5a 216 SUPERFAMILY SSF50814 31 216 5.87E-79 T 22-04-2016 IPR011038 Calycin-like APECO1_RS10515 ddb53413ff0755cf11320034ae64ff5a 216 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 37 216 2.3E-83 T 22-04-2016 IPR015304 ZinT domain GO:0008270 APECO1_RS20735 117556c651d76f6a97901c59922f99b9 331 PANTHER PTHR13778 18 309 2.0E-40 T 22-04-2016 APECO1_RS20735 117556c651d76f6a97901c59922f99b9 331 Pfam PF01501 Glycosyl transferase family 8 24 273 2.1E-63 T 22-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 APECO1_RS20735 117556c651d76f6a97901c59922f99b9 331 PANTHER PTHR13778:SF10 18 309 2.0E-40 T 22-04-2016 APECO1_RS20735 117556c651d76f6a97901c59922f99b9 331 Gene3D G3DSA:3.90.550.10 23 296 2.9E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS20735 117556c651d76f6a97901c59922f99b9 331 SUPERFAMILY SSF53448 24 294 3.0E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS20735 117556c651d76f6a97901c59922f99b9 331 Pfam PF08437 Glycosyl transferase family 8 C-terminal 275 331 2.4E-22 T 22-04-2016 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 UniPathway: UPA00958 APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 1.1E-112 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 PIRSF PIRSF000161 4 272 3.6E-92 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 PANTHER PTHR20836:SF0 6 273 2.8E-105 T 22-04-2016 APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 Gene3D G3DSA:3.40.50.720 5 167 1.0E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 SUPERFAMILY SSF51735 4 130 2.65E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 SUPERFAMILY SSF51735 240 272 2.65E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 SUPERFAMILY SSF55347 131 240 1.44E-37 T 22-04-2016 APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 6.8E-43 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.14 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 PANTHER PTHR20836 6 273 2.8E-105 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS00160 b20066010f6faf419c435f0018d04469 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 4.3E-41 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 PIRSF PIRSF006250 1 280 7.0E-67 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 276 3.7E-30 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 TIGRFAM TIGR01334 modD: modD protein 2 278 2.2E-152 T 22-04-2016 IPR006242 Putative pyrophosphorylase ModD GO:0016763 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.- APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 PANTHER PTHR11948:SF1 1 279 1.2E-45 T 22-04-2016 APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 SUPERFAMILY SSF51690 121 276 1.22E-35 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 PANTHER PTHR11948 1 279 1.2E-45 T 22-04-2016 APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 Gene3D G3DSA:3.90.1170.20 5 129 5.8E-28 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 103 6.5E-20 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 Gene3D G3DSA:3.20.20.70 130 267 2.7E-35 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS06320 8c61b486cd07944e198b740d79fe6d89 284 SUPERFAMILY SSF54675 2 105 7.85E-22 T 22-04-2016 APECO1_RS05445 3ea45bf91377644637e3d465a8ecb854 232 PANTHER PTHR34933:SF1 4 232 1.1E-86 T 22-04-2016 APECO1_RS05445 3ea45bf91377644637e3d465a8ecb854 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 230 28.065 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APECO1_RS05445 3ea45bf91377644637e3d465a8ecb854 232 Pfam PF02107 Flagellar L-ring protein 47 231 1.7E-60 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APECO1_RS05445 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 209 223 1.8E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APECO1_RS05445 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 73 85 1.8E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APECO1_RS05445 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 146 161 1.8E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APECO1_RS05445 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 193 207 1.8E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APECO1_RS05445 3ea45bf91377644637e3d465a8ecb854 232 PRINTS PR01008 Flagellar L-ring protein signature 172 188 1.8E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APECO1_RS05445 3ea45bf91377644637e3d465a8ecb854 232 PANTHER PTHR34933 4 232 1.1E-86 T 22-04-2016 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00072 Response regulator receiver domain 6 120 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 PANTHER PTHR26402 4 205 3.4E-153 T 22-04-2016 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.521 T 22-04-2016 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:3.40.50.2300 1 125 8.3E-21 T 22-04-2016 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 PANTHER PTHR26402:SF510 4 205 3.4E-153 T 22-04-2016 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF46894 146 207 2.38E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00421 148 205 4.2E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:1.10.10.10 126 207 4.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00448 4 120 3.8E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF52172 3 135 5.27E-21 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS12380 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS02845 d1b0497e25c781e7e5c5ed0418dadfde 72 Pfam PF03621 MbtH-like protein 4 54 9.0E-22 T 22-04-2016 IPR005153 MbtH-like protein APECO1_RS02845 d1b0497e25c781e7e5c5ed0418dadfde 72 PANTHER PTHR38444 3 72 8.1E-58 T 22-04-2016 APECO1_RS02845 d1b0497e25c781e7e5c5ed0418dadfde 72 SUPERFAMILY SSF160582 3 70 1.29E-24 T 22-04-2016 APECO1_RS02845 d1b0497e25c781e7e5c5ed0418dadfde 72 PANTHER PTHR38444:SF2 3 72 8.1E-58 T 22-04-2016 APECO1_RS02845 d1b0497e25c781e7e5c5ed0418dadfde 72 SMART SM00923 5 55 3.4E-24 T 22-04-2016 IPR005153 MbtH-like protein APECO1_RS02845 d1b0497e25c781e7e5c5ed0418dadfde 72 Gene3D G3DSA:3.90.820.10 12 70 9.9E-24 T 22-04-2016 APECO1_RS24490 a99b210754d8a9d5e0800794c1d6e49c 220 PANTHER PTHR36438 1 220 8.3E-109 T 22-04-2016 APECO1_RS24490 a99b210754d8a9d5e0800794c1d6e49c 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 4.0E-81 T 22-04-2016 IPR019903 Repair of iron centres family APECO1_RS24490 a99b210754d8a9d5e0800794c1d6e49c 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 1.3E-27 T 22-04-2016 IPR012312 Haemerythrin-like APECO1_RS24490 a99b210754d8a9d5e0800794c1d6e49c 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 1.3E-20 T 22-04-2016 IPR019903 Repair of iron centres family APECO1_RS24490 a99b210754d8a9d5e0800794c1d6e49c 220 PANTHER PTHR36438:SF1 1 220 8.3E-109 T 22-04-2016 APECO1_RS24490 a99b210754d8a9d5e0800794c1d6e49c 220 Gene3D G3DSA:1.20.120.520 78 217 1.3E-26 T 22-04-2016 APECO1_RS24490 a99b210754d8a9d5e0800794c1d6e49c 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 52.399 T 22-04-2016 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 APECO1_RS20530 3fa0bd00deeee4a67c12182ff2f1cf31 220 SMART SM00934 5 207 3.2E-35 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS20530 3fa0bd00deeee4a67c12182ff2f1cf31 220 PANTHER PTHR35039 1 219 3.0E-109 T 22-04-2016 APECO1_RS20530 3fa0bd00deeee4a67c12182ff2f1cf31 220 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 204 1.0E-28 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS20530 3fa0bd00deeee4a67c12182ff2f1cf31 220 PANTHER PTHR35039:SF2 1 219 3.0E-109 T 22-04-2016 APECO1_RS20530 3fa0bd00deeee4a67c12182ff2f1cf31 220 Gene3D G3DSA:3.20.20.70 1 215 2.5E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS20530 3fa0bd00deeee4a67c12182ff2f1cf31 220 SUPERFAMILY SSF51366 2 215 1.56E-36 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS23100 471ac452f51fc6f9383af0278bc4520b 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 1.9E-26 T 22-04-2016 IPR014318 Phage shock protein, PspG APECO1_RS23100 471ac452f51fc6f9383af0278bc4520b 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 3.0E-27 T 22-04-2016 IPR014318 Phage shock protein, PspG APECO1_RS24835 f34773a60358c6d36dc5ec0a10b324c4 184 Pfam PF00419 Fimbrial protein 35 184 2.9E-22 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS24835 f34773a60358c6d36dc5ec0a10b324c4 184 PANTHER PTHR33420:SF3 1 184 3.7E-52 T 22-04-2016 APECO1_RS24835 f34773a60358c6d36dc5ec0a10b324c4 184 SUPERFAMILY SSF49401 34 184 6.96E-37 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS24835 f34773a60358c6d36dc5ec0a10b324c4 184 Gene3D G3DSA:2.60.40.1090 33 184 1.5E-44 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS24835 f34773a60358c6d36dc5ec0a10b324c4 184 PANTHER PTHR33420 1 184 3.7E-52 T 22-04-2016 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 SUPERFAMILY SSF53743 2 355 1.7E-155 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 Hamap MF_01254 L-fucose isomerase [fucI]. 3 591 72.054 T 22-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 Pfam PF07882 L-fucose isomerase, second N-terminal domain 175 354 4.4E-81 T 22-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 Gene3D G3DSA:3.20.14.10 341 590 2.5E-132 T 22-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 PANTHER PTHR37840 1 590 9.2E-255 T 22-04-2016 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 Pfam PF02952 L-fucose isomerase, C-terminal domain 390 554 8.6E-55 T 22-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 Gene3D G3DSA:3.40.50.1070 4 175 1.3E-97 T 22-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 Pfam PF07881 L-fucose isomerase, first N-terminal domain 7 174 1.4E-83 T 22-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 TIGRFAM TIGR01089 fucI: L-fucose isomerase 5 590 0.0 T 22-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 PANTHER PTHR37840:SF1 1 590 9.2E-255 T 22-04-2016 APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 SUPERFAMILY SSF50443 356 590 7.59E-129 T 22-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal APECO1_RS15890 52e5f663a815cfbcbb304ed2a17543e3 591 Gene3D G3DSA:3.40.275.10 176 340 2.8E-80 T 22-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PANTHER PTHR21256:SF14 6 433 0.0 T 22-04-2016 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 SUPERFAMILY SSF53720 6 429 7.85E-93 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 Gene3D G3DSA:3.40.50.1980 29 240 1.1E-81 T 22-04-2016 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 427 41.434 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 1.8E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 1.8E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.8E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.8E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 1.8E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 1.8E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 1.8E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PRINTS PR00083 Histidinol dehydrogenase signature 109 136 1.8E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 Pfam PF00815 Histidinol dehydrogenase 28 427 2.9E-166 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PANTHER PTHR21256 6 433 0.0 T 22-04-2016 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 PIRSF PIRSF000099 1 430 7.6E-172 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS11235 c78547423477f86bb84dd08edcf33d6c 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 1.4E-161 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 4 446 37.133 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 Gene3D G3DSA:3.30.300.30 353 447 9.5E-17 T 22-04-2016 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 PANTHER PTHR24096:SF109 1 447 1.1E-233 T 22-04-2016 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 443 1.4E-112 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 Pfam PF00501 AMP-binding enzyme 12 355 2.1E-53 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 Gene3D G3DSA:2.30.38.10 291 350 2.9E-8 T 22-04-2016 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 PANTHER PTHR24096 1 447 1.1E-233 T 22-04-2016 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 Gene3D G3DSA:3.40.50.980 13 147 3.1E-21 T 22-04-2016 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 Gene3D G3DSA:3.40.50.980 148 290 6.0E-24 T 22-04-2016 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 SUPERFAMILY SSF56801 8 449 8.9E-94 T 22-04-2016 APECO1_RS12600 bfd97fb0e4c580ab3af2df799a89720e 451 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 423 9.9E-8 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APECO1_RS17695 1bf06ba766642bf4d39b82ef4e63c1e6 223 PANTHER PTHR36570 3 156 1.8E-99 T 22-04-2016 APECO1_RS17695 1bf06ba766642bf4d39b82ef4e63c1e6 223 PANTHER PTHR36570 188 223 1.8E-99 T 22-04-2016 APECO1_RS17695 1bf06ba766642bf4d39b82ef4e63c1e6 223 PANTHER PTHR36570:SF1 3 156 1.8E-99 T 22-04-2016 APECO1_RS17695 1bf06ba766642bf4d39b82ef4e63c1e6 223 PANTHER PTHR36570:SF1 188 223 1.8E-99 T 22-04-2016 APECO1_RS17695 1bf06ba766642bf4d39b82ef4e63c1e6 223 Pfam PF02600 Disulfide bond formation protein DsbB 24 212 1.8E-40 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 APECO1_RS17695 1bf06ba766642bf4d39b82ef4e63c1e6 223 Hamap MF_01311 Protein-disulfide oxidoreductase DsbI [dsbI]. 6 223 60.9 T 22-04-2016 IPR023792 Protein-disulfide oxidoreductase DsbI APECO1_RS17695 1bf06ba766642bf4d39b82ef4e63c1e6 223 Gene3D G3DSA:1.20.1550.10 15 220 5.8E-62 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain APECO1_RS17695 1bf06ba766642bf4d39b82ef4e63c1e6 223 SUPERFAMILY SSF158442 187 212 1.44E-31 T 22-04-2016 APECO1_RS17695 1bf06ba766642bf4d39b82ef4e63c1e6 223 SUPERFAMILY SSF158442 28 157 1.44E-31 T 22-04-2016 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 Gene3D G3DSA:3.30.1360.80 1 170 2.9E-76 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 PANTHER PTHR35799 2 169 6.6E-107 T 22-04-2016 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 PIRSF PIRSF006160 1 162 3.4E-66 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 4.0E-85 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 SUPERFAMILY SSF63411 4 162 3.2E-67 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 1.5E-62 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.6E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.6E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15300 9e01ce4838b08bee8178f00a8b68ada0 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 36.375 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 SUPERFAMILY SSF51735 2 258 8.06E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PANTHER PTHR24322:SF625 7 138 7.1E-49 T 22-04-2016 APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PANTHER PTHR24322:SF625 154 186 7.1E-49 T 22-04-2016 APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PANTHER PTHR24322 7 138 7.1E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PANTHER PTHR24322 154 186 7.1E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 Gene3D G3DSA:3.40.50.720 2 256 5.5E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 Pfam PF00106 short chain dehydrogenase 3 197 1.6E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.6E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.8E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.8E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.8E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.8E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15400 3c1b26e3893b376d3fb2aa5479467daf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 8.8E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 PANTHER PTHR30146:SF25 1 334 2.4E-231 T 22-04-2016 APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 6.6E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 Gene3D G3DSA:1.10.260.40 1 62 1.1E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 PANTHER PTHR30146 1 334 2.4E-231 T 22-04-2016 APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 4.6E-14 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 Gene3D G3DSA:3.40.50.2300 63 152 6.8E-29 T 22-04-2016 APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 SMART SM00354 1 73 7.4E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 SUPERFAMILY SSF53822 60 314 2.94E-42 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 Gene3D G3DSA:3.40.50.2300 156 329 1.4E-36 T 22-04-2016 APECO1_RS00440 33ee5c7827cf4687d3786823d4b545b0 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 2.4E-156 T 22-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 APECO1_RS22795 b620eef83f26a505c8ad08cdec30c90b 354 Gene3D G3DSA:3.20.20.210 2 352 2.3E-158 T 22-04-2016 APECO1_RS22795 b620eef83f26a505c8ad08cdec30c90b 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 3.0E-137 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS22795 b620eef83f26a505c8ad08cdec30c90b 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.739 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS22795 b620eef83f26a505c8ad08cdec30c90b 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS22795 b620eef83f26a505c8ad08cdec30c90b 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS22795 b620eef83f26a505c8ad08cdec30c90b 354 SUPERFAMILY SSF51726 1 352 8.37E-123 T 22-04-2016 APECO1_RS22795 b620eef83f26a505c8ad08cdec30c90b 354 PANTHER PTHR21091 1 351 9.5E-166 T 22-04-2016 APECO1_RS22795 b620eef83f26a505c8ad08cdec30c90b 354 PANTHER PTHR21091:SF2 1 351 9.5E-166 T 22-04-2016 APECO1_RS22795 b620eef83f26a505c8ad08cdec30c90b 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 9.8E-143 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 693 8.5E-142 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 Gene3D G3DSA:3.20.70.20 350 513 2.9E-57 T 22-04-2016 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 Gene3D G3DSA:3.20.70.20 108 297 2.9E-57 T 22-04-2016 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 Gene3D G3DSA:3.20.70.20 577 691 2.9E-57 T 22-04-2016 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 99 171 2.4E-12 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 SUPERFAMILY SSF48168 13 174 3.4E-63 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 SUPERFAMILY SSF51998 175 698 8.85E-186 T 22-04-2016 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 8.2E-34 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 8.2E-34 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 8.2E-34 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 8.2E-34 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 604 8.2E-34 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 8.2E-34 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 103 696 4.4E-158 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 PANTHER PTHR11573 29 700 7.3E-264 T 22-04-2016 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 15 714 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 1.7E-28 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS15235 66c7580aa1166d90e9b3c12fd57f863a 714 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 566 588 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS03815 5359d2ad7f90ed04dffe11283242dc3a 237 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 223 4.2E-12 T 22-04-2016 APECO1_RS08835 677e66b325e30791cd7989dc9b435a00 173 PANTHER PTHR10003 1 172 2.8E-113 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 APECO1_RS08835 677e66b325e30791cd7989dc9b435a00 173 SUPERFAMILY SSF49329 23 173 3.8E-46 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08835 677e66b325e30791cd7989dc9b435a00 173 PANTHER PTHR10003:SF40 1 172 2.8E-113 T 22-04-2016 APECO1_RS08835 677e66b325e30791cd7989dc9b435a00 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08835 677e66b325e30791cd7989dc9b435a00 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 34 172 1.4E-30 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08835 677e66b325e30791cd7989dc9b435a00 173 Gene3D G3DSA:2.60.40.200 23 173 7.2E-46 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 SUPERFAMILY SSF52009 125 246 4.58E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 Gene3D G3DSA:3.20.20.60 256 572 4.6E-116 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 3.2E-31 T 22-04-2016 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 3.2E-31 T 22-04-2016 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 3.2E-31 T 22-04-2016 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 3.2E-31 T 22-04-2016 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.5E-30 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 SUPERFAMILY SSF51621 249 549 1.6E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 PIRSF PIRSF000732 1 574 8.6E-219 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 1.2E-273 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 PANTHER PTHR22931 66 550 3.6E-221 T 22-04-2016 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 Gene3D G3DSA:1.10.274.10 23 132 1.2E-39 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 SUPERFAMILY SSF47831 23 143 3.27E-34 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 Gene3D G3DSA:3.50.30.10 133 255 3.0E-42 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.2E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS13605 daa29868852daa25fd214e053e640327 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 5.0E-127 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 SUPERFAMILY SSF52540 237 363 3.27E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 SUPERFAMILY SSF52540 50 169 3.27E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 Gene3D G3DSA:3.40.50.300 3 155 6.1E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 3.5E-26 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 SUPERFAMILY SSF57829 424 465 4.76E-7 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 Gene3D G3DSA:3.40.50.300 238 355 2.7E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 SMART SM00490 263 345 2.8E-10 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 PANTHER PTHR24031 232 367 9.0E-229 T 22-04-2016 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 PANTHER PTHR24031 443 586 9.0E-229 T 22-04-2016 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 PANTHER PTHR24031 1 163 9.0E-229 T 22-04-2016 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 PANTHER PTHR24031 187 200 9.0E-229 T 22-04-2016 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 PANTHER PTHR24031:SF319 232 367 9.0E-229 T 22-04-2016 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 PANTHER PTHR24031:SF319 443 586 9.0E-229 T 22-04-2016 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 PANTHER PTHR24031:SF319 1 163 9.0E-229 T 22-04-2016 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 PANTHER PTHR24031:SF319 187 200 9.0E-229 T 22-04-2016 APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 SMART SM00487 1 185 7.3E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS12205 869274c75efbf7defb9ff8e0b7b2fb33 586 Pfam PF00271 Helicase conserved C-terminal domain 241 343 1.2E-12 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 Pfam PF04545 Sigma-70, region 4 186 233 2.1E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 64.07 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 Gene3D G3DSA:1.10.10.10 173 238 5.8E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 7.9E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 Pfam PF04542 Sigma-70 region 2 16 88 2.1E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 SUPERFAMILY SSF88659 160 237 8.41E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 PANTHER PTHR30385 15 238 6.5E-73 T 22-04-2016 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 Pfam PF04539 Sigma-70 region 3 97 166 5.6E-20 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 Gene3D G3DSA:1.10.601.10 11 80 1.1E-14 T 22-04-2016 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 SUPERFAMILY SSF88659 89 156 5.67E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 PIRSF PIRSF000770 1 238 7.5E-42 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 Gene3D G3DSA:1.10.10.10 88 135 7.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 PANTHER PTHR30385:SF7 15 238 6.5E-73 T 22-04-2016 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 1.6E-87 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 PRINTS PR00046 Major sigma-70 factor signature 67 75 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 PRINTS PR00046 Major sigma-70 factor signature 221 232 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 PRINTS PR00046 Major sigma-70 factor signature 206 221 2.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS10265 eaa7965669b601fa19a0bf909cf4ff29 239 SUPERFAMILY SSF88946 5 88 3.61E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS11410 87a491bf4cd4cff6ea3f157de8843be1 405 Pfam PF00534 Glycosyl transferases group 1 292 349 9.1E-7 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APECO1_RS11410 87a491bf4cd4cff6ea3f157de8843be1 405 PANTHER PTHR12526:SF397 182 405 4.1E-38 T 22-04-2016 APECO1_RS11410 87a491bf4cd4cff6ea3f157de8843be1 405 PANTHER PTHR12526:SF397 1 158 4.1E-38 T 22-04-2016 APECO1_RS11410 87a491bf4cd4cff6ea3f157de8843be1 405 Pfam PF13439 Glycosyltransferase Family 4 13 223 3.9E-10 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APECO1_RS11410 87a491bf4cd4cff6ea3f157de8843be1 405 PANTHER PTHR12526 182 405 4.1E-38 T 22-04-2016 APECO1_RS11410 87a491bf4cd4cff6ea3f157de8843be1 405 PANTHER PTHR12526 1 158 4.1E-38 T 22-04-2016 APECO1_RS11410 87a491bf4cd4cff6ea3f157de8843be1 405 Gene3D G3DSA:3.40.50.2000 295 357 6.8E-4 T 22-04-2016 APECO1_RS11410 87a491bf4cd4cff6ea3f157de8843be1 405 TIGRFAM TIGR04015 WcaC: colanic acid biosynthesis glycosyltransferase WcaC 1 405 1.0E-270 T 22-04-2016 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC UniPathway: UPA00936 APECO1_RS11410 87a491bf4cd4cff6ea3f157de8843be1 405 SUPERFAMILY SSF53756 11 405 5.76E-27 T 22-04-2016 APECO1_RS18640 2d10212c414dea72e3a8a92fa95b0c70 489 SUPERFAMILY SSF50249 39 128 2.62E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS18640 2d10212c414dea72e3a8a92fa95b0c70 489 Pfam PF00575 S1 RNA binding domain 38 109 1.4E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS18640 2d10212c414dea72e3a8a92fa95b0c70 489 Gene3D G3DSA:2.40.50.140 30 128 1.1E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS18640 2d10212c414dea72e3a8a92fa95b0c70 489 PANTHER PTHR30001 1 489 1.5E-228 T 22-04-2016 APECO1_RS18640 2d10212c414dea72e3a8a92fa95b0c70 489 Pfam PF10150 Ribonuclease E/G family 124 393 7.9E-102 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APECO1_RS18640 2d10212c414dea72e3a8a92fa95b0c70 489 SMART SM00316 37 122 1.2E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS18640 2d10212c414dea72e3a8a92fa95b0c70 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 9.9E-179 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APECO1_RS05485 4351f757cf6aee852ca815343ae1137d 194 PANTHER PTHR11746 122 193 2.7E-37 T 22-04-2016 APECO1_RS05485 4351f757cf6aee852ca815343ae1137d 194 Gene3D G3DSA:3.90.950.10 2 187 4.8E-62 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APECO1_RS05485 4351f757cf6aee852ca815343ae1137d 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 185 4.1E-75 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APECO1_RS05485 4351f757cf6aee852ca815343ae1137d 194 PIRSF PIRSF006305 1 193 3.3E-46 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APECO1_RS05485 4351f757cf6aee852ca815343ae1137d 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 31.77 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APECO1_RS05485 4351f757cf6aee852ca815343ae1137d 194 SUPERFAMILY SSF52972 1 185 6.34E-62 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APECO1_RS05485 4351f757cf6aee852ca815343ae1137d 194 Pfam PF02545 Maf-like protein 3 186 5.9E-47 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APECO1_RS05485 4351f757cf6aee852ca815343ae1137d 194 PANTHER PTHR11746:SF102 122 193 2.7E-37 T 22-04-2016 APECO1_RS01815 22065ccee20bd9bbb80a12cf9117299f 203 PANTHER PTHR23416 1 194 2.6E-68 T 22-04-2016 APECO1_RS01815 22065ccee20bd9bbb80a12cf9117299f 203 SMART SM01266 6 60 3.6E-14 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APECO1_RS01815 22065ccee20bd9bbb80a12cf9117299f 203 PANTHER PTHR23416:SF58 1 194 2.6E-68 T 22-04-2016 APECO1_RS01815 22065ccee20bd9bbb80a12cf9117299f 203 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 96 110 0.23 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS01815 22065ccee20bd9bbb80a12cf9117299f 203 Pfam PF12464 Maltose acetyltransferase 8 59 1.8E-10 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APECO1_RS01815 22065ccee20bd9bbb80a12cf9117299f 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS01815 22065ccee20bd9bbb80a12cf9117299f 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 1.6E-11 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS01815 22065ccee20bd9bbb80a12cf9117299f 203 SUPERFAMILY SSF51161 5 197 2.63E-56 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS01815 22065ccee20bd9bbb80a12cf9117299f 203 Gene3D G3DSA:2.160.10.10 3 191 6.6E-63 T 22-04-2016 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Gene3D G3DSA:3.40.50.510 1 129 3.8E-41 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Gene3D G3DSA:3.50.30.10 389 506 1.1E-33 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Pfam PF03610 PTS system fructose IIA component 4 119 6.6E-23 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 161 235 1.3E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 752 764 2.4E-20 T 22-04-2016 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 699 714 2.4E-20 T 22-04-2016 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 547 566 2.4E-20 T 22-04-2016 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 716 731 2.4E-20 T 22-04-2016 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 SUPERFAMILY SSF53062 1 123 8.5E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Gene3D G3DSA:1.10.274.10 289 388 1.3E-25 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 267 791 2.7E-139 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 PANTHER PTHR22931:SF15 300 790 3.6E-161 T 22-04-2016 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 168 175 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 SUPERFAMILY SSF51621 509 791 3.93E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Pfam PF00381 PTS HPr component phosphorylation site 160 237 1.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 PANTHER PTHR22931 300 790 3.6E-161 T 22-04-2016 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 512 791 3.6E-97 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 123 7.3E-34 T 22-04-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 PRINTS PR00107 Phosphocarrier protein signature 193 208 5.6E-9 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 PRINTS PR00107 Phosphocarrier protein signature 208 225 5.6E-9 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 PRINTS PR00107 Phosphocarrier protein signature 168 184 5.6E-9 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 438 449 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 SUPERFAMILY SSF52009 380 497 9.03E-28 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Pfam PF05524 PEP-utilising enzyme, N-terminal 269 381 3.7E-21 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 SUPERFAMILY SSF47831 290 398 4.71E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Gene3D G3DSA:3.30.1340.10 158 242 2.6E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Gene3D G3DSA:3.20.20.60 512 791 1.2E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 Pfam PF00391 PEP-utilising enzyme, mobile domain 408 479 8.8E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS24905 d940d073d95e080ce132cee8301f01e1 793 SUPERFAMILY SSF55594 157 242 4.71E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS16430 84f547645909697ad39635b9da28269c 298 Gene3D G3DSA:1.10.150.130 7 99 4.2E-30 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS16430 84f547645909697ad39635b9da28269c 298 PANTHER PTHR30349:SF5 7 298 8.7E-127 T 22-04-2016 APECO1_RS16430 84f547645909697ad39635b9da28269c 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 298 31.687 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APECO1_RS16430 84f547645909697ad39635b9da28269c 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 3.8E-25 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APECO1_RS16430 84f547645909697ad39635b9da28269c 298 PANTHER PTHR30349 7 298 8.7E-127 T 22-04-2016 APECO1_RS16430 84f547645909697ad39635b9da28269c 298 Gene3D G3DSA:1.10.443.10 113 289 7.8E-60 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS16430 84f547645909697ad39635b9da28269c 298 Pfam PF00589 Phage integrase family 113 284 2.6E-56 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS16430 84f547645909697ad39635b9da28269c 298 SUPERFAMILY SSF56349 106 296 5.0E-60 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS16430 84f547645909697ad39635b9da28269c 298 SUPERFAMILY SSF47823 6 100 1.0E-35 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal APECO1_RS16430 84f547645909697ad39635b9da28269c 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 66.809 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 APECO1_RS16430 84f547645909697ad39635b9da28269c 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 6.3E-120 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 Pfam PF00467 KOW motif 130 162 4.2E-8 T 22-04-2016 IPR005824 KOW APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 SMART SM00739 127 154 7.9E-7 T 22-04-2016 IPR005824 KOW APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 SUPERFAMILY SSF82679 6 116 4.32E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 SMART SM00738 6 115 8.6E-51 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 Gene3D G3DSA:2.30.30.30 120 181 1.7E-32 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.8E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 SUPERFAMILY SSF50104 125 180 4.66E-20 T 22-04-2016 IPR008991 Translation protein SH3-like domain APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.812 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 Gene3D G3DSA:3.30.70.940 6 116 8.9E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 PANTHER PTHR30265 3 180 1.2E-87 T 22-04-2016 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 2.8E-71 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APECO1_RS22720 728829054ec6249f1c5d4249b2b2eca4 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APECO1_RS17825 61a8fc349f9c6f31608225f4ed4266c1 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 485 1.9E-184 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS17825 61a8fc349f9c6f31608225f4ed4266c1 487 PANTHER PTHR10283 94 487 1.7E-187 T 22-04-2016 APECO1_RS17825 61a8fc349f9c6f31608225f4ed4266c1 487 PANTHER PTHR10283 1 78 1.7E-187 T 22-04-2016 APECO1_RS17825 61a8fc349f9c6f31608225f4ed4266c1 487 PIRSF PIRSF002457 2 487 2.4E-132 T 22-04-2016 IPR030676 Citrate carrier CitT-related APECO1_RS17825 61a8fc349f9c6f31608225f4ed4266c1 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 482 9.0E-167 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS17825 61a8fc349f9c6f31608225f4ed4266c1 487 PANTHER PTHR10283:SF13 94 487 1.7E-187 T 22-04-2016 IPR030676 Citrate carrier CitT-related APECO1_RS17825 61a8fc349f9c6f31608225f4ed4266c1 487 PANTHER PTHR10283:SF13 1 78 1.7E-187 T 22-04-2016 IPR030676 Citrate carrier CitT-related APECO1_RS24945 82ca05d26cf92a5bbff6684cd1319f50 380 SUPERFAMILY SSF110738 1 374 1.83E-126 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS24945 82ca05d26cf92a5bbff6684cd1319f50 380 PANTHER PTHR21599 1 372 1.9E-142 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS24945 82ca05d26cf92a5bbff6684cd1319f50 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 376 8.2E-166 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS24945 82ca05d26cf92a5bbff6684cd1319f50 380 Gene3D G3DSA:3.90.1510.10 42 275 5.1E-91 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APECO1_RS24945 82ca05d26cf92a5bbff6684cd1319f50 380 Pfam PF02595 Glycerate kinase family 3 374 1.9E-133 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS24945 82ca05d26cf92a5bbff6684cd1319f50 380 PIRSF PIRSF006078 1 379 8.2E-128 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS24945 82ca05d26cf92a5bbff6684cd1319f50 380 PANTHER PTHR21599:SF4 1 372 1.9E-142 T 22-04-2016 APECO1_RS06550 fdac5ebd57f1155340d7ac31bae488cd 137 SUPERFAMILY SSF81273 93 136 1.02E-12 T 22-04-2016 APECO1_RS06550 fdac5ebd57f1155340d7ac31bae488cd 137 Gene3D G3DSA:1.10.287.1050 1 58 4.4E-32 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 APECO1_RS06550 fdac5ebd57f1155340d7ac31bae488cd 137 PANTHER PTHR38097:SF1 2 137 1.1E-109 T 22-04-2016 APECO1_RS06550 fdac5ebd57f1155340d7ac31bae488cd 137 PIRSF PIRSF002096 1 135 4.2E-58 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APECO1_RS06550 fdac5ebd57f1155340d7ac31bae488cd 137 Gene3D G3DSA:4.10.430.10 91 136 6.3E-27 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APECO1_RS06550 fdac5ebd57f1155340d7ac31bae488cd 137 Pfam PF00816 H-NS histone family 32 127 1.4E-20 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APECO1_RS06550 fdac5ebd57f1155340d7ac31bae488cd 137 PANTHER PTHR38097 2 137 1.1E-109 T 22-04-2016 APECO1_RS06550 fdac5ebd57f1155340d7ac31bae488cd 137 SMART SM00528 87 135 1.0E-26 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APECO1_RS06550 fdac5ebd57f1155340d7ac31bae488cd 137 SUPERFAMILY SSF81273 2 58 5.1E-18 T 22-04-2016 APECO1_RS03050 723afa78dd8cb0f4392bbdc68d14adc4 321 SMART SM00729 84 293 1.9E-15 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS03050 723afa78dd8cb0f4392bbdc68d14adc4 321 SUPERFAMILY SSF102114 52 316 8.76E-68 T 22-04-2016 APECO1_RS03050 723afa78dd8cb0f4392bbdc68d14adc4 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 4.8E-164 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APECO1_RS03050 723afa78dd8cb0f4392bbdc68d14adc4 321 Pfam PF04055 Radical SAM superfamily 91 251 1.1E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS03050 723afa78dd8cb0f4392bbdc68d14adc4 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 9.4E-7 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APECO1_RS03050 723afa78dd8cb0f4392bbdc68d14adc4 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.267 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APECO1_RS03050 723afa78dd8cb0f4392bbdc68d14adc4 321 PIRSF PIRSF005963 2 321 3.2E-131 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APECO1_RS03050 723afa78dd8cb0f4392bbdc68d14adc4 321 PANTHER PTHR10949 4 321 5.3E-183 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APECO1_RS03050 723afa78dd8cb0f4392bbdc68d14adc4 321 Gene3D G3DSA:3.20.20.70 55 312 1.2E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 1.6E-40 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 Pfam PF02926 THUMP domain 28 161 1.1E-28 T 22-04-2016 IPR004114 THUMP domain GO:0003723 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.2E-81 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 232.479 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 SMART SM00981 75 165 3.8E-26 T 22-04-2016 IPR004114 THUMP domain GO:0003723 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 SUPERFAMILY SSF143437 1 173 6.98E-51 T 22-04-2016 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 PANTHER PTHR14911 3 417 1.9E-290 T 22-04-2016 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 Gene3D G3DSA:3.40.50.620 173 333 1.1E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 SUPERFAMILY SSF52402 174 372 7.28E-42 T 22-04-2016 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 1.1E-146 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 Gene3D G3DSA:3.40.250.10 407 480 1.9E-7 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 SUPERFAMILY SSF52821 405 481 7.2E-9 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS02150 a5a277d042751013a0d960f82caca9e0 482 PANTHER PTHR14911:SF15 3 417 1.9E-290 T 22-04-2016 APECO1_RS02565 386b490809aec36c66d805ca86c74d78 308 SUPERFAMILY SSF53850 105 292 3.26E-21 T 22-04-2016 APECO1_RS02565 386b490809aec36c66d805ca86c74d78 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS02565 386b490809aec36c66d805ca86c74d78 308 Pfam PF03466 LysR substrate binding domain 91 290 1.2E-20 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS02565 386b490809aec36c66d805ca86c74d78 308 Gene3D G3DSA:3.40.190.10 183 256 3.1E-9 T 22-04-2016 APECO1_RS02565 386b490809aec36c66d805ca86c74d78 308 PANTHER PTHR30579 1 307 1.7E-188 T 22-04-2016 APECO1_RS02565 386b490809aec36c66d805ca86c74d78 308 SUPERFAMILY SSF46785 3 88 1.52E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02565 386b490809aec36c66d805ca86c74d78 308 Gene3D G3DSA:3.40.190.10 105 182 2.0E-4 T 22-04-2016 APECO1_RS02565 386b490809aec36c66d805ca86c74d78 308 PANTHER PTHR30579:SF5 1 307 1.7E-188 T 22-04-2016 APECO1_RS02565 386b490809aec36c66d805ca86c74d78 308 Gene3D G3DSA:1.10.10.10 2 88 9.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04340 7685e403ced062aa096db5195bf558e7 72 Gene3D G3DSA:2.40.50.140 1 71 6.9E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04340 7685e403ced062aa096db5195bf558e7 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.442 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APECO1_RS04340 7685e403ced062aa096db5195bf558e7 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.1E-39 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APECO1_RS04340 7685e403ced062aa096db5195bf558e7 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.4E-28 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APECO1_RS04340 7685e403ced062aa096db5195bf558e7 72 PANTHER PTHR33370 1 72 3.6E-50 T 22-04-2016 APECO1_RS04340 7685e403ced062aa096db5195bf558e7 72 SUPERFAMILY SSF50249 1 70 5.36E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04340 7685e403ced062aa096db5195bf558e7 72 SMART SM00316 4 72 2.8E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS13555 dad1af03249bd2ef8c57f87afc734387 277 Gene3D G3DSA:3.40.50.1580 14 276 3.1E-92 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS13555 dad1af03249bd2ef8c57f87afc734387 277 PANTHER PTHR11904 14 276 2.5E-120 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase APECO1_RS13555 dad1af03249bd2ef8c57f87afc734387 277 PIRSF PIRSF000477 1 276 1.1E-118 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APECO1_RS13555 dad1af03249bd2ef8c57f87afc734387 277 Pfam PF01048 Phosphorylase superfamily 27 273 5.9E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS13555 dad1af03249bd2ef8c57f87afc734387 277 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 27 274 1.4E-161 T 22-04-2016 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00119|UniPathway: UPA00606 APECO1_RS13555 dad1af03249bd2ef8c57f87afc734387 277 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 27 272 2.0E-105 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APECO1_RS13555 dad1af03249bd2ef8c57f87afc734387 277 PANTHER PTHR11904:SF9 14 276 2.5E-120 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APECO1_RS13555 dad1af03249bd2ef8c57f87afc734387 277 SUPERFAMILY SSF53167 9 275 1.24E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS01105 684c969a510cee618a9465f351567bca 256 SUPERFAMILY SSF53335 11 243 3.95E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS01105 684c969a510cee618a9465f351567bca 256 Gene3D G3DSA:3.40.50.150 8 254 6.0E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS01105 684c969a510cee618a9465f351567bca 256 PANTHER PTHR10108:SF835 8 249 2.8E-97 T 22-04-2016 APECO1_RS01105 684c969a510cee618a9465f351567bca 256 PANTHER PTHR10108 8 249 2.8E-97 T 22-04-2016 APECO1_RS01105 684c969a510cee618a9465f351567bca 256 Pfam PF08241 Methyltransferase domain 49 145 1.3E-25 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.420.10 252 274 5.8E-46 T 22-04-2016 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.420.10 310 407 5.8E-46 T 22-04-2016 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.420.10 579 700 8.3E-47 T 22-04-2016 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 SUPERFAMILY SSF48113 435 725 6.19E-106 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 8.4E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 59 72 8.4E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 74 99 8.4E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 8.4E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 33 55 8.4E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 ProSitePatterns PS00436 Peroxidases active site signature. 97 108 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.520.10 704 725 2.3E-52 T 22-04-2016 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.520.10 54 251 5.6E-69 T 22-04-2016 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 Gene3D G3DSA:1.10.520.10 432 578 2.3E-52 T 22-04-2016 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 Hamap MF_01961 Catalase-peroxidase [katG]. 11 726 39.622 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 SUPERFAMILY SSF48113 30 429 2.5E-141 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 97 111 3.4E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 3.4E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 175 187 3.4E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 157 174 3.4E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 3.4E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 18 726 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 Pfam PF00141 Peroxidase 77 396 2.9E-48 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 Pfam PF00141 Peroxidase 403 700 2.6E-35 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PANTHER PTHR30555:SF0 1 725 0.0 T 22-04-2016 APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 259 269 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site APECO1_RS22500 98d52b548c339a246e3ae44bbf25d557 726 PANTHER PTHR30555 1 725 0.0 T 22-04-2016 APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 239 7.2E-10 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 SMART SM00478 130 276 9.4E-33 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 SUPERFAMILY SSF48150 102 274 5.58E-49 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 Gene3D G3DSA:3.30.310.20 2 112 5.1E-32 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 PANTHER PTHR10242 1 281 1.6E-114 T 22-04-2016 APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 SMART SM01009 1 112 3.7E-41 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 Gene3D G3DSA:1.10.1670.10 231 281 1.3E-20 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 22-04-2016 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 SUPERFAMILY SSF55945 2 97 3.92E-25 T 22-04-2016 APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 Gene3D G3DSA:1.10.340.30 113 229 9.1E-39 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 PANTHER PTHR10242:SF3 1 281 1.6E-114 T 22-04-2016 APECO1_RS11475 02475f0d839655a0f554b357ba5ced20 282 Pfam PF06029 AlkA N-terminal domain 3 112 3.0E-24 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 5.5E-139 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 308 1.5E-39 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 PIRSF PIRSF000446 1 309 2.7E-148 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 SUPERFAMILY SSF52151 4 122 3.4E-82 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 SUPERFAMILY SSF52151 190 308 3.4E-82 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 PANTHER PTHR10982 1 298 1.7E-164 T 22-04-2016 APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 Gene3D G3DSA:3.30.70.250 125 196 1.3E-32 T 22-04-2016 APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 Pfam PF00698 Acyl transferase domain 6 283 3.2E-39 T 22-04-2016 IPR014043 Acyl transferase APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 Gene3D G3DSA:3.40.366.10 197 298 2.4E-72 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 Gene3D G3DSA:3.40.366.10 3 122 2.4E-72 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APECO1_RS05510 cdf8527e4138c1721447a37f11f48ad1 309 SUPERFAMILY SSF55048 128 197 2.62E-18 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 SUPERFAMILY SSF51419 25 277 7.41E-59 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 276 1.2E-68 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 Gene3D G3DSA:3.20.20.10 36 262 2.7E-66 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 SUPERFAMILY SSF50621 250 419 3.14E-58 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 8.56E-28 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 8.56E-28 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 8.56E-28 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 8.56E-28 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 395 2.0E-15 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 418 7.6E-146 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 2.33E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 2.33E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 2.33E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 2.33E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 2.33E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 39.818 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PANTHER PTHR11482:SF5 7 418 1.9E-151 T 22-04-2016 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 Gene3D G3DSA:2.40.37.10 263 419 2.1E-57 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS16235 fcb34fd038764f69b5563b132c358750 420 PANTHER PTHR11482 7 418 1.9E-151 T 22-04-2016 APECO1_RS03915 2b73dceaba56309337abd43fea15a1af 308 SUPERFAMILY SSF53335 43 296 7.64E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS03915 2b73dceaba56309337abd43fea15a1af 308 Gene3D G3DSA:3.40.50.150 89 272 4.0E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS03915 2b73dceaba56309337abd43fea15a1af 308 PIRSF PIRSF029038 1 308 5.8E-149 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 APECO1_RS03915 2b73dceaba56309337abd43fea15a1af 308 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 5 298 53.717 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 APECO1_RS03915 2b73dceaba56309337abd43fea15a1af 308 PANTHER PTHR13393:SF0 1 300 3.0E-134 T 22-04-2016 APECO1_RS03915 2b73dceaba56309337abd43fea15a1af 308 Pfam PF05971 Protein of unknown function (DUF890) 3 296 3.4E-154 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 APECO1_RS03915 2b73dceaba56309337abd43fea15a1af 308 PANTHER PTHR13393 1 300 3.0E-134 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 APECO1_RS06300 1a80e822748dfe7c395b91773e376199 203 Hamap MF_01381 Endo-type membrane-bound lytic murein transglycosylase A [emtA]. 1 203 67.896 T 22-04-2016 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A GO:0008932|GO:0009279|GO:0016837|GO:0016998 APECO1_RS06300 1a80e822748dfe7c395b91773e376199 203 Pfam PF01464 Transglycosylase SLT domain 43 168 2.7E-29 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APECO1_RS06300 1a80e822748dfe7c395b91773e376199 203 SUPERFAMILY SSF53955 37 195 1.18E-26 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS06300 1a80e822748dfe7c395b91773e376199 203 PANTHER PTHR21666:SF216 22 203 1.3E-121 T 22-04-2016 APECO1_RS06300 1a80e822748dfe7c395b91773e376199 203 Gene3D G3DSA:1.10.530.10 34 198 1.4E-30 T 22-04-2016 APECO1_RS06300 1a80e822748dfe7c395b91773e376199 203 PANTHER PTHR21666 22 203 1.3E-121 T 22-04-2016 APECO1_RS06300 1a80e822748dfe7c395b91773e376199 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 Pfam PF02272 DHHA1 domain 800 868 6.5E-17 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 8.6E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 SMART SM00863 653 696 7.6E-22 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.5E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 PANTHER PTHR11777 1 876 0.0 T 22-04-2016 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 SUPERFAMILY SSF101353 256 465 7.19E-62 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 SUPERFAMILY SSF55681 4 255 1.04E-108 T 22-04-2016 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 SUPERFAMILY SSF50447 455 551 6.36E-21 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 Gene3D G3DSA:3.30.930.10 4 251 2.6E-128 T 22-04-2016 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 210.03 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 SUPERFAMILY SSF55186 552 708 1.57E-52 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 PANTHER PTHR11777:SF9 1 876 0.0 T 22-04-2016 APECO1_RS15355 3e3404db1305230ddf6edc96ecd3b0ce 876 Pfam PF01411 tRNA synthetases class II (A) 7 556 5.4E-241 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APECO1_RS23365 d337d6452a6bceb240d4abc16dba8151 139 SMART SM00926 1 54 8.1E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS23365 d337d6452a6bceb240d4abc16dba8151 139 Gene3D G3DSA:2.20.25.90 1 54 1.7E-21 T 22-04-2016 APECO1_RS23365 d337d6452a6bceb240d4abc16dba8151 139 PANTHER PTHR11615 1 139 7.7E-54 T 22-04-2016 APECO1_RS23365 d337d6452a6bceb240d4abc16dba8151 139 Pfam PF00384 Molybdopterin oxidoreductase 61 138 1.3E-19 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS23365 d337d6452a6bceb240d4abc16dba8151 139 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APECO1_RS23365 d337d6452a6bceb240d4abc16dba8151 139 Gene3D G3DSA:3.40.50.740 61 136 3.0E-27 T 22-04-2016 APECO1_RS23365 d337d6452a6bceb240d4abc16dba8151 139 SUPERFAMILY SSF53706 1 139 6.54E-51 T 22-04-2016 APECO1_RS23365 d337d6452a6bceb240d4abc16dba8151 139 PANTHER PTHR11615:SF112 1 139 7.7E-54 T 22-04-2016 APECO1_RS23365 d337d6452a6bceb240d4abc16dba8151 139 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 2.0E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 Pfam PF01546 Peptidase family M20/M25/M40 73 480 5.7E-21 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PANTHER PTHR11014 204 279 1.0E-208 T 22-04-2016 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PANTHER PTHR11014 1 185 1.0E-208 T 22-04-2016 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PIRSF PIRSF016599 1 485 1.0E-214 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 SUPERFAMILY SSF53187 10 182 3.01E-66 T 22-04-2016 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 SUPERFAMILY SSF53187 397 482 3.01E-66 T 22-04-2016 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PANTHER PTHR11014:SF54 204 279 1.0E-208 T 22-04-2016 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 Pfam PF07687 Peptidase dimerisation domain 209 293 5.9E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PANTHER PTHR11014 330 485 1.0E-208 T 22-04-2016 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 Gene3D G3DSA:3.40.630.10 397 483 3.8E-111 T 22-04-2016 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 Gene3D G3DSA:3.40.630.10 3 181 3.8E-111 T 22-04-2016 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 1.7E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 1.7E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 1.7E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.7E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 1.7E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.7E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.7E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.7E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 1.7E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PANTHER PTHR11014:SF54 330 485 1.0E-208 T 22-04-2016 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 6.9E-186 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APECO1_RS01350 62634707a92c15e0af26d2b37dc04084 485 PANTHER PTHR11014:SF54 1 185 1.0E-208 T 22-04-2016 APECO1_RS21005 8ef52e4ae7b1adaf3a97b79e67a3d302 96 PANTHER PTHR30239 1 94 1.2E-67 T 22-04-2016 APECO1_RS21005 8ef52e4ae7b1adaf3a97b79e67a3d302 96 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 15 78 2.0E-14 T 22-04-2016 APECO1_RS21005 8ef52e4ae7b1adaf3a97b79e67a3d302 96 Pfam PF01842 ACT domain 10 73 5.3E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS21005 8ef52e4ae7b1adaf3a97b79e67a3d302 96 SUPERFAMILY SSF55021 9 80 3.86E-16 T 22-04-2016 APECO1_RS21005 8ef52e4ae7b1adaf3a97b79e67a3d302 96 PANTHER PTHR30239:SF4 1 94 1.2E-67 T 22-04-2016 APECO1_RS21005 8ef52e4ae7b1adaf3a97b79e67a3d302 96 Gene3D G3DSA:3.30.70.260 10 82 5.2E-22 T 22-04-2016 APECO1_RS00455 049383c87ab3f6e97f9a4884f97c116f 121 PANTHER PTHR37479:SF1 12 121 5.7E-45 T 22-04-2016 APECO1_RS00455 049383c87ab3f6e97f9a4884f97c116f 121 Pfam PF04999 Cell division protein FtsL 25 119 2.3E-35 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APECO1_RS00455 049383c87ab3f6e97f9a4884f97c116f 121 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 118 16.85 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APECO1_RS00455 049383c87ab3f6e97f9a4884f97c116f 121 PANTHER PTHR37479 12 121 5.7E-45 T 22-04-2016 APECO1_RS00455 049383c87ab3f6e97f9a4884f97c116f 121 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 118 1.1E-28 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APECO1_RS17575 d79f43b8f4c40aef193277852d830dab 219 SMART SM00448 1 112 2.6E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS17575 d79f43b8f4c40aef193277852d830dab 219 PANTHER PTHR26402:SF279 1 218 6.6E-146 T 22-04-2016 APECO1_RS17575 d79f43b8f4c40aef193277852d830dab 219 SUPERFAMILY SSF52172 1 173 1.66E-35 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS17575 d79f43b8f4c40aef193277852d830dab 219 Gene3D G3DSA:1.10.10.10 122 217 9.9E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17575 d79f43b8f4c40aef193277852d830dab 219 Gene3D G3DSA:3.40.50.2300 1 121 4.3E-36 T 22-04-2016 APECO1_RS17575 d79f43b8f4c40aef193277852d830dab 219 Pfam PF00072 Response regulator receiver domain 3 112 7.6E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS17575 d79f43b8f4c40aef193277852d830dab 219 SMART SM00862 145 216 2.3E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS17575 d79f43b8f4c40aef193277852d830dab 219 PANTHER PTHR26402 1 218 6.6E-146 T 22-04-2016 APECO1_RS17575 d79f43b8f4c40aef193277852d830dab 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 9.5E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 1.9E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 Gene3D G3DSA:3.40.50.300 138 312 2.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 Pfam PF00158 Sigma-54 interaction domain 140 306 1.4E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 PANTHER PTHR32071:SF15 6 469 5.4E-259 T 22-04-2016 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 SMART SM00448 4 115 1.1E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 Gene3D G3DSA:1.10.8.60 313 392 1.6E-24 T 22-04-2016 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 Pfam PF00072 Response regulator receiver domain 6 115 5.9E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 SUPERFAMILY SSF46689 380 469 5.38E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 SUPERFAMILY SSF52540 139 382 9.46E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 SMART SM00382 160 311 5.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 Gene3D G3DSA:1.10.10.60 399 469 5.0E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 9.9E-249 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 Gene3D G3DSA:3.40.50.2300 6 132 1.2E-39 T 22-04-2016 APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 SUPERFAMILY SSF52172 6 185 7.26E-49 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS22100 22ad80c9da55d61e0f545daedc34cce0 469 PANTHER PTHR32071 6 469 5.4E-259 T 22-04-2016 APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 Gene3D G3DSA:1.10.10.10 12 95 2.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 2.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 PANTHER PTHR30537 10 308 3.9E-150 T 22-04-2016 APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 PANTHER PTHR30537:SF8 10 308 3.9E-150 T 22-04-2016 APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 4.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 4.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 4.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 SUPERFAMILY SSF46785 17 123 2.62E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 Gene3D G3DSA:3.40.190.10 98 185 2.3E-13 T 22-04-2016 APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 SUPERFAMILY SSF53850 99 308 8.87E-33 T 22-04-2016 APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 8 308 5.3E-180 T 22-04-2016 IPR011781 D-serine deaminase transcriptional activator APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 Pfam PF03466 LysR substrate binding domain 99 307 1.5E-30 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS13335 8c0ce02de4bcaf8205c3a9436db25a06 311 Gene3D G3DSA:3.40.190.10 186 274 5.4E-19 T 22-04-2016 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 Pfam PF13932 GidA associated domain 403 616 2.6E-73 T 22-04-2016 IPR026904 GidA associated domain 3 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 43.06 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 PANTHER PTHR11806 1 629 0.0 T 22-04-2016 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 PANTHER PTHR11806:SF0 1 629 0.0 T 22-04-2016 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 SMART SM01228 546 617 9.2E-45 T 22-04-2016 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 SUPERFAMILY SSF51905 97 261 2.07E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 SUPERFAMILY SSF51905 7 66 2.07E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 0.0 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 Gene3D G3DSA:3.50.50.60 7 233 3.1E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS21345 e0e788d15b3634f695e46707a8569d9f 629 Pfam PF01134 Glucose inhibited division protein A 8 398 1.0E-170 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APECO1_RS06240 09fd704aef4bb30d717af61d090c2706 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.6E-8 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein APECO1_RS06240 09fd704aef4bb30d717af61d090c2706 148 PIRSF PIRSF006173 1 145 2.2E-68 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 APECO1_RS06240 09fd704aef4bb30d717af61d090c2706 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 42.67 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 APECO1_RS06240 09fd704aef4bb30d717af61d090c2706 148 PANTHER PTHR37421 1 148 1.2E-84 T 22-04-2016 APECO1_RS06240 09fd704aef4bb30d717af61d090c2706 148 PANTHER PTHR37421:SF1 1 148 1.2E-84 T 22-04-2016 APECO1_RS23350 96e213dbd9117491c747c56f8ee04675 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 349 3.3E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23350 96e213dbd9117491c747c56f8ee04675 349 PANTHER PTHR30465 207 349 1.9E-193 T 22-04-2016 APECO1_RS23350 96e213dbd9117491c747c56f8ee04675 349 PANTHER PTHR30465 2 183 1.9E-193 T 22-04-2016 APECO1_RS23350 96e213dbd9117491c747c56f8ee04675 349 Gene3D G3DSA:1.10.3720.10 102 177 3.2E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23350 96e213dbd9117491c747c56f8ee04675 349 Gene3D G3DSA:1.10.3720.10 216 344 3.2E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23350 96e213dbd9117491c747c56f8ee04675 349 PANTHER PTHR30465:SF77 207 349 1.9E-193 T 22-04-2016 APECO1_RS23350 96e213dbd9117491c747c56f8ee04675 349 PANTHER PTHR30465:SF77 2 183 1.9E-193 T 22-04-2016 APECO1_RS23350 96e213dbd9117491c747c56f8ee04675 349 SUPERFAMILY SSF161098 213 334 3.66E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23350 96e213dbd9117491c747c56f8ee04675 349 SUPERFAMILY SSF161098 106 174 3.66E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS09200 045e0e7d5dff1f700ee6232859e26b64 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.5E-27 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APECO1_RS09200 045e0e7d5dff1f700ee6232859e26b64 327 PANTHER PTHR11538 92 327 5.9E-120 T 22-04-2016 APECO1_RS09200 045e0e7d5dff1f700ee6232859e26b64 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 50.131 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APECO1_RS09200 045e0e7d5dff1f700ee6232859e26b64 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.6E-119 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APECO1_RS09200 045e0e7d5dff1f700ee6232859e26b64 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.5E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APECO1_RS09200 045e0e7d5dff1f700ee6232859e26b64 327 Gene3D G3DSA:3.30.930.10 9 327 3.0E-135 T 22-04-2016 APECO1_RS09200 045e0e7d5dff1f700ee6232859e26b64 327 SUPERFAMILY SSF46589 14 99 8.89E-23 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APECO1_RS09200 045e0e7d5dff1f700ee6232859e26b64 327 SUPERFAMILY SSF55681 92 327 7.96E-82 T 22-04-2016 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 SMART SM00421 151 208 3.4E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.3E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 Gene3D G3DSA:1.10.10.10 155 211 4.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 Pfam PF00072 Response regulator receiver domain 9 121 2.6E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 PANTHER PTHR26402 7 213 6.7E-105 T 22-04-2016 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 PANTHER PTHR26402:SF458 7 213 6.7E-105 T 22-04-2016 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 Gene3D G3DSA:3.40.50.2300 6 154 5.4E-38 T 22-04-2016 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 SUPERFAMILY SSF46894 137 210 7.48E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 SMART SM00448 7 120 1.2E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS12250 642df7d8daa212b1a8c03ad6543354bb 215 SUPERFAMILY SSF52172 7 137 3.7E-34 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS01300 bc6c5e4a54d5d8073f241870cb1a1df0 249 Gene3D G3DSA:3.90.1720.10 119 244 2.3E-40 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS01300 bc6c5e4a54d5d8073f241870cb1a1df0 249 PANTHER PTHR21666 122 243 2.4E-38 T 22-04-2016 APECO1_RS01300 bc6c5e4a54d5d8073f241870cb1a1df0 249 PANTHER PTHR21666 26 34 2.4E-38 T 22-04-2016 APECO1_RS01300 bc6c5e4a54d5d8073f241870cb1a1df0 249 SUPERFAMILY SSF54001 120 243 6.38E-36 T 22-04-2016 APECO1_RS01300 bc6c5e4a54d5d8073f241870cb1a1df0 249 Pfam PF00877 NlpC/P60 family 131 241 3.1E-30 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS22635 3f2a04d045e95c7cacae8b9478f44d71 366 SUPERFAMILY SSF53335 6 363 2.92E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS22635 3f2a04d045e95c7cacae8b9478f44d71 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 2.3E-186 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APECO1_RS22635 3f2a04d045e95c7cacae8b9478f44d71 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APECO1_RS22635 3f2a04d045e95c7cacae8b9478f44d71 366 Gene3D G3DSA:3.40.50.150 154 364 1.8E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS22635 3f2a04d045e95c7cacae8b9478f44d71 366 PANTHER PTHR11061 6 366 2.6E-240 T 22-04-2016 APECO1_RS22635 3f2a04d045e95c7cacae8b9478f44d71 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 2.7E-187 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 APECO1_RS22635 3f2a04d045e95c7cacae8b9478f44d71 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.815 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 APECO1_RS22635 3f2a04d045e95c7cacae8b9478f44d71 366 PANTHER PTHR11061:SF25 6 366 2.6E-240 T 22-04-2016 APECO1_RS22635 3f2a04d045e95c7cacae8b9478f44d71 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 Pfam PF00255 Glutathione peroxidase 7 111 3.1E-46 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 22-04-2016 IPR029759 Glutathione peroxidase active site APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 PANTHER PTHR11592:SF40 1 182 6.3E-94 T 22-04-2016 APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 PIRSF PIRSF000303 1 183 4.0E-64 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 SUPERFAMILY SSF52833 6 182 3.42E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.3E-19 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.3E-19 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 1.3E-19 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 Gene3D G3DSA:3.40.30.10 5 182 2.6E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS09180 cd60fc978b30057cf027823f8fc03100 183 PANTHER PTHR11592 1 182 6.3E-94 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APECO1_RS08040 673d5929fb0bc0b8f918ae2b8d7718e2 172 Gene3D G3DSA:3.40.630.30 1 166 1.4E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS08040 673d5929fb0bc0b8f918ae2b8d7718e2 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 2.3E-18 T 22-04-2016 APECO1_RS08040 673d5929fb0bc0b8f918ae2b8d7718e2 172 SUPERFAMILY SSF55729 3 165 2.4E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS08040 673d5929fb0bc0b8f918ae2b8d7718e2 172 PANTHER PTHR23091 1 168 6.1E-97 T 22-04-2016 APECO1_RS08040 673d5929fb0bc0b8f918ae2b8d7718e2 172 PANTHER PTHR23091:SF187 1 168 6.1E-97 T 22-04-2016 APECO1_RS22390 e54679a550c12e443d354277193d93b8 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 335 2.2E-188 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APECO1_RS22390 e54679a550c12e443d354277193d93b8 336 SUPERFAMILY SSF56655 2 325 5.68E-112 T 22-04-2016 APECO1_RS22390 e54679a550c12e443d354277193d93b8 336 PANTHER PTHR30447 1 336 1.5E-186 T 22-04-2016 APECO1_RS22390 e54679a550c12e443d354277193d93b8 336 PANTHER PTHR30447:SF0 1 336 1.5E-186 T 22-04-2016 APECO1_RS22390 e54679a550c12e443d354277193d93b8 336 PIRSF PIRSF004532 1 333 1.1E-142 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APECO1_RS22390 e54679a550c12e443d354277193d93b8 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 1.1E-132 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APECO1_RS22390 e54679a550c12e443d354277193d93b8 336 Gene3D G3DSA:3.30.540.10 1 170 5.6E-70 T 22-04-2016 APECO1_RS22390 e54679a550c12e443d354277193d93b8 336 Gene3D G3DSA:3.30.540.10 171 332 6.1E-49 T 22-04-2016 APECO1_RS22260 3cc4fe1869bbc8b51aec775d2916e06d 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.188 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 APECO1_RS22260 3cc4fe1869bbc8b51aec775d2916e06d 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 4.1E-57 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 APECO1_RS22260 3cc4fe1869bbc8b51aec775d2916e06d 104 Pfam PF05336 Domain of unknown function (DUF718) 3 103 3.0E-29 T 22-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 APECO1_RS22260 3cc4fe1869bbc8b51aec775d2916e06d 104 PANTHER PTHR34389:SF2 1 103 3.0E-58 T 22-04-2016 APECO1_RS22260 3cc4fe1869bbc8b51aec775d2916e06d 104 SUPERFAMILY SSF54909 1 104 2.32E-37 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS22260 3cc4fe1869bbc8b51aec775d2916e06d 104 PANTHER PTHR34389 1 103 3.0E-58 T 22-04-2016 APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 SMART SM00267 226 395 1.5E-69 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 SMART SM00052 405 649 1.1E-118 T 22-04-2016 IPR001633 EAL domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 SUPERFAMILY SSF141868 412 657 2.09E-81 T 22-04-2016 IPR001633 EAL domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 394 3.8E-35 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 SUPERFAMILY SSF55785 123 234 1.47E-15 T 22-04-2016 IPR000014 PAS domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 233 2.5E-13 T 22-04-2016 IPR000014 PAS domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 PANTHER PTHR10799:SF710 53 197 1.1E-92 T 22-04-2016 APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 PANTHER PTHR10799:SF710 268 504 1.1E-92 T 22-04-2016 APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 Gene3D G3DSA:3.20.20.450 409 656 5.3E-87 T 22-04-2016 IPR001633 EAL domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 SUPERFAMILY SSF55073 243 397 2.59E-44 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 Gene3D G3DSA:3.30.450.20 111 218 2.9E-18 T 22-04-2016 APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 Pfam PF00563 EAL domain 412 644 5.3E-65 T 22-04-2016 IPR001633 EAL domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 390 3.4E-46 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 SMART SM00091 111 177 1.0E-6 T 22-04-2016 IPR000014 PAS domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 Pfam PF13426 PAS domain 123 225 1.1E-9 T 22-04-2016 IPR000014 PAS domain APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 Gene3D G3DSA:3.30.70.270 239 403 1.5E-51 T 22-04-2016 APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 PANTHER PTHR10799 53 197 1.1E-92 T 22-04-2016 APECO1_RS07130 dddaef4018d0e0370eed9c70d7089f50 661 PANTHER PTHR10799 268 504 1.1E-92 T 22-04-2016 APECO1_RS01125 baa389b877a7f741a38376cf573ddbda 155 Gene3D G3DSA:3.30.420.10 3 148 1.9E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS01125 baa389b877a7f741a38376cf573ddbda 155 SUPERFAMILY SSF53098 4 147 6.45E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS01125 baa389b877a7f741a38376cf573ddbda 155 PANTHER PTHR10642 4 152 1.8E-64 T 22-04-2016 APECO1_RS01125 baa389b877a7f741a38376cf573ddbda 155 Pfam PF00075 RNase H 3 141 5.4E-55 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 APECO1_RS01125 baa389b877a7f741a38376cf573ddbda 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 40.404 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 APECO1_RS22520 21c2a235869a70ca36b7bce3a0502e1e 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS22520 21c2a235869a70ca36b7bce3a0502e1e 367 Gene3D G3DSA:1.20.1090.10 160 364 2.1E-69 T 22-04-2016 APECO1_RS22520 21c2a235869a70ca36b7bce3a0502e1e 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 2.0E-63 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS22520 21c2a235869a70ca36b7bce3a0502e1e 367 PANTHER PTHR11496 1 361 7.0E-203 T 22-04-2016 APECO1_RS22520 21c2a235869a70ca36b7bce3a0502e1e 367 SUPERFAMILY SSF56796 3 355 3.66E-88 T 22-04-2016 APECO1_RS22520 21c2a235869a70ca36b7bce3a0502e1e 367 PIRSF PIRSF000112 1 360 1.9E-98 T 22-04-2016 APECO1_RS22520 21c2a235869a70ca36b7bce3a0502e1e 367 Gene3D G3DSA:3.40.50.1970 2 158 2.8E-44 T 22-04-2016 APECO1_RS22520 21c2a235869a70ca36b7bce3a0502e1e 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS22520 21c2a235869a70ca36b7bce3a0502e1e 367 PANTHER PTHR11496:SF57 1 361 7.0E-203 T 22-04-2016 APECO1_RS15265 97aeff5a7ac48c263c9c3432825a6690 245 Pfam PF03591 AzlC protein 24 165 2.8E-37 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease APECO1_RS15265 97aeff5a7ac48c263c9c3432825a6690 245 PANTHER PTHR34979 1 245 3.2E-57 T 22-04-2016 APECO1_RS22235 444af201730bd8b6d135bb080bb793ae 195 Gene3D G3DSA:3.40.50.740 109 173 8.9E-16 T 22-04-2016 APECO1_RS22235 444af201730bd8b6d135bb080bb793ae 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 3.7E-19 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS22235 444af201730bd8b6d135bb080bb793ae 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APECO1_RS22235 444af201730bd8b6d135bb080bb793ae 195 PANTHER PTHR11615 41 195 3.8E-128 T 22-04-2016 APECO1_RS22235 444af201730bd8b6d135bb080bb793ae 195 PANTHER PTHR11615:SF149 41 195 3.8E-128 T 22-04-2016 APECO1_RS22235 444af201730bd8b6d135bb080bb793ae 195 SUPERFAMILY SSF53706 35 195 1.57E-57 T 22-04-2016 APECO1_RS22235 444af201730bd8b6d135bb080bb793ae 195 SMART SM00926 43 104 4.9E-22 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS22235 444af201730bd8b6d135bb080bb793ae 195 Gene3D G3DSA:2.20.25.90 37 108 6.5E-25 T 22-04-2016 APECO1_RS22235 444af201730bd8b6d135bb080bb793ae 195 Pfam PF00384 Molybdopterin oxidoreductase 107 155 2.6E-6 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS07515 ce05dbb1ae202d9902875090e9a4af93 248 PANTHER PTHR30050:SF7 1 248 5.3E-95 T 22-04-2016 APECO1_RS07515 ce05dbb1ae202d9902875090e9a4af93 248 PANTHER PTHR30050 1 248 5.3E-95 T 22-04-2016 APECO1_RS07515 ce05dbb1ae202d9902875090e9a4af93 248 Gene3D G3DSA:3.40.50.300 52 224 2.2E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07515 ce05dbb1ae202d9902875090e9a4af93 248 PIRSF PIRSF003073 1 248 2.5E-58 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APECO1_RS07515 ce05dbb1ae202d9902875090e9a4af93 248 Pfam PF01695 IstB-like ATP binding protein 59 219 4.2E-21 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APECO1_RS07515 ce05dbb1ae202d9902875090e9a4af93 248 SUPERFAMILY SSF52540 66 225 1.34E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 PANTHER PTHR18964:SF141 44 175 2.5E-61 T 22-04-2016 APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 Gene3D G3DSA:1.10.10.10 16 167 7.2E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 SUPERFAMILY SSF46785 22 166 3.29E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 PANTHER PTHR18964 44 175 2.5E-61 T 22-04-2016 APECO1_RS15275 64bea006ef1b176c4639c5dd6c38a563 176 SMART SM00347 46 148 3.0E-31 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS24005 3e2580383b8c2539077ac1bf75fee515 467 Pfam PF13520 Amino acid permease 3 405 2.1E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS24005 3e2580383b8c2539077ac1bf75fee515 467 PANTHER PTHR11785 187 458 1.0E-151 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS24005 3e2580383b8c2539077ac1bf75fee515 467 PANTHER PTHR11785 1 170 1.0E-151 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS24005 3e2580383b8c2539077ac1bf75fee515 467 PIRSF PIRSF006060 1 465 2.8E-43 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS24005 3e2580383b8c2539077ac1bf75fee515 467 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 466 4.7E-141 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 APECO1_RS24005 3e2580383b8c2539077ac1bf75fee515 467 PANTHER PTHR11785:SF77 187 458 1.0E-151 T 22-04-2016 APECO1_RS24005 3e2580383b8c2539077ac1bf75fee515 467 PANTHER PTHR11785:SF77 1 170 1.0E-151 T 22-04-2016 APECO1_RS21830 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 SUPERFAMILY SSF46689 6 79 1.63E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS21830 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 Pfam PF01380 SIS domain 126 255 1.6E-20 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS21830 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 SUPERFAMILY SSF53697 103 269 7.69E-34 T 22-04-2016 APECO1_RS21830 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 Gene3D G3DSA:1.10.10.10 6 66 1.5E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21830 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 PANTHER PTHR30514:SF1 1 261 2.7E-56 T 22-04-2016 APECO1_RS21830 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 77 5.2E-22 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APECO1_RS21830 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 Gene3D G3DSA:3.40.50.10490 67 271 5.6E-33 T 22-04-2016 APECO1_RS21830 2d4de59f2ac9b7c0d2a3091fb50d1cf3 281 PANTHER PTHR30514 1 261 2.7E-56 T 22-04-2016 APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 PANTHER PTHR11695:SF558 15 353 3.8E-154 T 22-04-2016 APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 PANTHER PTHR11695 15 353 3.8E-154 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 Pfam PF00107 Zinc-binding dehydrogenase 185 312 2.1E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 6.1E-29 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 SMART SM00829 11 349 6.7E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 Gene3D G3DSA:3.90.180.10 1 177 1.3E-47 T 22-04-2016 IPR011032 GroES-like APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 Gene3D G3DSA:3.40.50.720 178 297 7.5E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 SUPERFAMILY SSF51735 148 307 3.47E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 SUPERFAMILY SSF50129 322 350 5.48E-43 T 22-04-2016 IPR011032 GroES-like APECO1_RS14395 664aea0136ed3b684ce730124e65f055 353 SUPERFAMILY SSF50129 2 152 5.48E-43 T 22-04-2016 IPR011032 GroES-like APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 PANTHER PTHR32282 185 828 0.0 T 22-04-2016 APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 68 795 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 Pfam PF00905 Penicillin binding protein transpeptidase domain 473 715 3.6E-24 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 Pfam PF14814 Bifunctional transglycosylase second domain 113 197 7.9E-28 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 Pfam PF00912 Transglycosylase 209 380 2.4E-54 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 PANTHER PTHR32282:SF11 185 828 0.0 T 22-04-2016 APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 PIRSF PIRSF002799 13 843 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 SUPERFAMILY SSF56601 412 778 9.71E-104 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 SUPERFAMILY SSF56601 362 384 9.71E-104 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 Gene3D G3DSA:3.40.710.10 382 798 1.7E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 SUPERFAMILY SSF53955 196 403 2.14E-65 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 Gene3D G3DSA:1.20.5.100 54 96 2.6E-25 T 22-04-2016 APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 79 1.8E-26 T 22-04-2016 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 Gene3D G3DSA:3.30.2060.10 111 200 1.2E-34 T 22-04-2016 APECO1_RS00805 d185a8969d5f65577c88ab2c5b9e45c3 844 Gene3D G3DSA:1.10.3810.10 205 381 7.2E-63 T 22-04-2016 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 372 2.5E-26 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 Gene3D G3DSA:3.30.310.50 375 455 1.0E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 PANTHER PTHR22573 7 456 5.2E-202 T 22-04-2016 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 4.8E-32 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 4.8E-32 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 4.8E-32 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 4.8E-32 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 SUPERFAMILY SSF53738 153 261 3.92E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 258 3.1E-22 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 SUPERFAMILY SSF53738 263 368 6.67E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 PANTHER PTHR22573:SF18 7 456 5.2E-202 T 22-04-2016 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 Gene3D G3DSA:3.40.120.10 6 149 5.2E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 SUPERFAMILY SSF55957 374 456 5.23E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 131 6.3E-32 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 Gene3D G3DSA:3.40.120.10 172 254 5.8E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 445 2.9E-9 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 Gene3D G3DSA:3.40.120.10 255 368 1.6E-42 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11365 7c23ea3f19b4283ab02e0d51c5e23341 456 SUPERFAMILY SSF53738 4 176 9.42E-39 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS25625 0ffefffd947407452561c120a19377b8 175 PANTHER PTHR34699 1 174 1.6E-108 T 22-04-2016 APECO1_RS25625 0ffefffd947407452561c120a19377b8 175 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 6 170 5.9E-73 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase APECO1_RS25625 0ffefffd947407452561c120a19377b8 175 Gene3D G3DSA:3.90.950.10 2 168 1.5E-63 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APECO1_RS25625 0ffefffd947407452561c120a19377b8 175 SUPERFAMILY SSF52972 1 167 3.58E-58 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APECO1_RS25625 0ffefffd947407452561c120a19377b8 175 Pfam PF01931 Protein of unknown function DUF84 7 166 6.1E-53 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 APECO1_RS25625 0ffefffd947407452561c120a19377b8 175 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 30.235 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase APECO1_RS25625 0ffefffd947407452561c120a19377b8 175 PANTHER PTHR34699:SF3 1 174 1.6E-108 T 22-04-2016 APECO1_RS24740 ab55c109d45c43fafefca1e4a322a5b5 509 SUPERFAMILY SSF52540 13 369 1.25E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24740 ab55c109d45c43fafefca1e4a322a5b5 509 Gene3D G3DSA:3.40.50.300 204 380 6.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24740 ab55c109d45c43fafefca1e4a322a5b5 509 Gene3D G3DSA:3.40.50.300 16 108 6.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24740 ab55c109d45c43fafefca1e4a322a5b5 509 PANTHER PTHR30121:SF3 21 441 2.2E-188 T 22-04-2016 APECO1_RS24740 ab55c109d45c43fafefca1e4a322a5b5 509 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 500 4.9E-248 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal APECO1_RS24740 ab55c109d45c43fafefca1e4a322a5b5 509 PANTHER PTHR30121 21 441 2.2E-188 T 22-04-2016 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 831 966 4.6E-14 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 8.3E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 SUPERFAMILY SSF82697 1 152 5.75E-53 T 22-04-2016 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 SUPERFAMILY SSF56042 818 1032 5.98E-58 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 SUPERFAMILY SSF56042 432 615 6.73E-52 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 Gene3D G3DSA:3.40.50.880 1040 1263 7.1E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 SUPERFAMILY SSF55326 618 816 4.19E-67 T 22-04-2016 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 PANTHER PTHR10099 1 1295 0.0 T 22-04-2016 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 PANTHER PTHR10099:SF5 1 1295 0.0 T 22-04-2016 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 SMART SM01211 1039 1294 9.7E-161 T 22-04-2016 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 Gene3D G3DSA:3.30.1330.10 645 810 1.0E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 Gene3D G3DSA:3.30.1330.10 211 421 1.3E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.755 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 SUPERFAMILY SSF52317 1035 1293 1.02E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 SUPERFAMILY SSF55326 221 428 1.12E-64 T 22-04-2016 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 SUPERFAMILY SSF109736 155 220 1.02E-21 T 22-04-2016 APECO1_RS14455 85658459ef1bb0462d6309934ae29e62 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 1.0E-104 T 22-04-2016 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 5.7E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 5.7E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 5.7E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 5.7E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 PIRSF PIRSF001365 1 295 4.8E-73 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 PANTHER PTHR12128 5 290 6.7E-80 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 Gene3D G3DSA:3.20.20.70 3 294 3.2E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 Pfam PF00701 Dihydrodipicolinate synthetase family 6 272 3.7E-61 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 SMART SM01130 4 293 3.6E-94 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS03275 e299cd93f5f9e7d8affdb83a8173ae33 295 SUPERFAMILY SSF51569 2 293 9.52E-77 T 22-04-2016 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Pfam PF10371 Domain of unknown function 626 678 6.0E-23 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Gene3D G3DSA:4.10.780.10 628 668 7.9E-21 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 PANTHER PTHR32154:SF0 1 1174 0.0 T 22-04-2016 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Gene3D G3DSA:3.30.70.20 672 783 6.6E-21 T 22-04-2016 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 SUPERFAMILY SSF53323 419 668 1.44E-76 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 SMART SM00890 622 679 4.1E-29 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 1.1E-9 T 22-04-2016 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 1.3E-81 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 PANTHER PTHR32154 1 1174 0.0 T 22-04-2016 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 PIRSF PIRSF000159 1 1174 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Gene3D G3DSA:3.40.920.10 418 619 1.3E-78 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 7.4E-16 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Gene3D G3DSA:3.40.50.920 255 413 2.7E-63 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 SUPERFAMILY SSF54862 665 838 6.7E-23 T 22-04-2016 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 SUPERFAMILY SSF52922 256 411 2.0E-43 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Gene3D G3DSA:3.40.50.970 796 1166 3.0E-127 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 SUPERFAMILY SSF52518 794 1166 1.39E-118 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 954 1066 2.5E-8 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Gene3D G3DSA:3.40.50.970 1 254 5.3E-111 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 3.7E-34 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 SUPERFAMILY SSF52518 2 254 6.18E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS07800 4473f2b7b6727b15ce7b0292ab564597 1174 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1165 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APECO1_RS21635 ee548188db47154f1325348c7e1a7ca8 551 ProSitePatterns PS00149 Sulfatases signature 2. 180 190 - T 22-04-2016 IPR024607 Sulfatase, conserved site APECO1_RS21635 ee548188db47154f1325348c7e1a7ca8 551 PANTHER PTHR10342:SF199 84 514 1.3E-116 T 22-04-2016 APECO1_RS21635 ee548188db47154f1325348c7e1a7ca8 551 PANTHER PTHR10342 84 514 1.3E-116 T 22-04-2016 APECO1_RS21635 ee548188db47154f1325348c7e1a7ca8 551 Gene3D G3DSA:3.40.720.10 84 467 2.0E-92 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS21635 ee548188db47154f1325348c7e1a7ca8 551 ProSitePatterns PS00523 Sulfatases signature 1. 134 146 - T 22-04-2016 IPR024607 Sulfatase, conserved site APECO1_RS21635 ee548188db47154f1325348c7e1a7ca8 551 Pfam PF00884 Sulfatase 86 418 2.4E-87 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS21635 ee548188db47154f1325348c7e1a7ca8 551 Gene3D G3DSA:3.30.1120.10 468 536 5.3E-4 T 22-04-2016 APECO1_RS21635 ee548188db47154f1325348c7e1a7ca8 551 SUPERFAMILY SSF53649 83 542 1.09E-95 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS25110 bac18432808bba911238b9801217304f 323 SUPERFAMILY SSF53850 131 212 3.36E-5 T 22-04-2016 APECO1_RS25110 bac18432808bba911238b9801217304f 323 PANTHER PTHR33376 4 312 1.5E-68 T 22-04-2016 APECO1_RS25110 bac18432808bba911238b9801217304f 323 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 306 2.8E-66 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 APECO1_RS25110 bac18432808bba911238b9801217304f 323 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 284 2.2E-53 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APECO1_RS25110 bac18432808bba911238b9801217304f 323 PIRSF PIRSF006470 1 323 1.8E-66 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APECO1_RS13590 dbff7c9b90f1e95a740c4485693de230 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 3.3E-44 T 22-04-2016 APECO1_RS13590 dbff7c9b90f1e95a740c4485693de230 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 29.292 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 APECO1_RS13590 dbff7c9b90f1e95a740c4485693de230 253 PANTHER PTHR37468 2 253 2.2E-108 T 22-04-2016 APECO1_RS19520 b1128cbbb5dd6b174db33c69aa22e300 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 9.9E-120 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 APECO1_RS19520 b1128cbbb5dd6b174db33c69aa22e300 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.113 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 APECO1_RS19520 b1128cbbb5dd6b174db33c69aa22e300 256 Gene3D G3DSA:3.40.50.1820 3 251 3.1E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS19520 b1128cbbb5dd6b174db33c69aa22e300 256 SUPERFAMILY SSF53474 3 250 4.63E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS19520 b1128cbbb5dd6b174db33c69aa22e300 256 PANTHER PTHR10992 1 255 3.4E-138 T 22-04-2016 APECO1_RS19520 b1128cbbb5dd6b174db33c69aa22e300 256 Pfam PF00561 alpha/beta hydrolase fold 15 242 9.5E-31 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS19520 b1128cbbb5dd6b174db33c69aa22e300 256 PANTHER PTHR10992:SF812 1 255 3.4E-138 T 22-04-2016 APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 Gene3D G3DSA:1.10.10.10 5 70 3.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 4.7E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 SUPERFAMILY SSF48008 98 227 8.89E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 Pfam PF07729 FCD domain 99 218 3.4E-25 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.9E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.9E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 Gene3D G3DSA:1.20.120.530 93 227 7.0E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 SMART SM00895 97 220 1.8E-17 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 PANTHER PTHR11751:SF21 95 113 3.0E-45 T 22-04-2016 APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 PANTHER PTHR11751:SF21 1 75 3.0E-45 T 22-04-2016 APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 SMART SM00345 9 68 1.3E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 SUPERFAMILY SSF46785 4 72 3.98E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 PANTHER PTHR11751 95 113 3.0E-45 T 22-04-2016 APECO1_RS21110 763f7017b7dc4d72eba1fdff27ead134 229 PANTHER PTHR11751 1 75 3.0E-45 T 22-04-2016 APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 325 345 5.9E-25 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 283 300 5.9E-25 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 63 83 5.9E-25 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 302 320 5.9E-25 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 28 42 5.9E-25 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 PANTHER PTHR13370 12 181 6.9E-23 T 22-04-2016 APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 PANTHER PTHR13370 264 332 6.9E-23 T 22-04-2016 APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 Pfam PF01555 DNA methylase 29 340 3.9E-42 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 SUPERFAMILY SSF53335 9 189 6.78E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 SUPERFAMILY SSF53335 267 345 6.78E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 Gene3D G3DSA:3.40.50.150 264 344 9.5E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 Gene3D G3DSA:3.40.50.150 6 147 9.5E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06760 cdcc3b0ecdbe2f8772a16b34ff49c384 349 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 32 38 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS16600 44ce07477b6cceaf6ab0598531ca8440 237 PANTHER PTHR10285:SF81 21 218 6.9E-45 T 22-04-2016 APECO1_RS16600 44ce07477b6cceaf6ab0598531ca8440 237 SUPERFAMILY SSF52540 33 219 5.51E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16600 44ce07477b6cceaf6ab0598531ca8440 237 PANTHER PTHR10285 21 218 6.9E-45 T 22-04-2016 APECO1_RS16600 44ce07477b6cceaf6ab0598531ca8440 237 Gene3D G3DSA:3.40.50.300 6 229 7.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 Gene3D G3DSA:3.40.1390.10 1 80 1.8E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 Gene3D G3DSA:3.40.1190.10 82 310 1.0E-76 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 SUPERFAMILY SSF53244 313 446 2.98E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 394 3.5E-15 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 Pfam PF08245 Mur ligase middle domain 106 292 4.5E-52 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 446 1.1E-142 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 PANTHER PTHR23135:SF3 12 448 1.6E-173 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 Gene3D G3DSA:3.90.190.20 313 448 1.1E-45 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 SUPERFAMILY SSF63418 1 97 1.31E-28 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 SUPERFAMILY SSF53623 100 310 4.45E-60 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 PANTHER PTHR23135 12 448 1.6E-173 T 22-04-2016 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 447 34.768 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00470 23c73cfcd3a9dcf02ae9d46cf70593b3 452 Pfam PF01225 Mur ligase family, catalytic domain 26 80 3.0E-9 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 124 204 1.8E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 239 6.1E-102 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 Gene3D G3DSA:1.10.150.240 22 99 1.2E-26 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 240 36.717 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 SUPERFAMILY SSF56784 2 239 6.67E-60 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 209 1.2E-36 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 PANTHER PTHR18901:SF14 1 248 2.0E-100 T 22-04-2016 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 PANTHER PTHR18901 1 248 2.0E-100 T 22-04-2016 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 Gene3D G3DSA:3.40.50.1000 100 239 3.4E-47 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 1.8E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 136 1.8E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 1.8E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.8E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19380 35026b4e2173e03cd4813fd7b86781c2 252 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 209 4.9E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS05550 5c96612253d5137046f0005b72e1e632 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APECO1_RS05550 5c96612253d5137046f0005b72e1e632 265 Pfam PF01026 TatD related DNase 4 255 1.3E-76 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS05550 5c96612253d5137046f0005b72e1e632 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 3.4E-97 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 APECO1_RS05550 5c96612253d5137046f0005b72e1e632 265 PIRSF PIRSF005902 1 259 2.4E-75 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS05550 5c96612253d5137046f0005b72e1e632 265 Gene3D G3DSA:3.20.20.140 2 257 2.5E-86 T 22-04-2016 APECO1_RS05550 5c96612253d5137046f0005b72e1e632 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APECO1_RS05550 5c96612253d5137046f0005b72e1e632 265 PANTHER PTHR10060:SF20 1 258 6.7E-139 T 22-04-2016 APECO1_RS05550 5c96612253d5137046f0005b72e1e632 265 SUPERFAMILY SSF51556 1 259 8.52E-89 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS05550 5c96612253d5137046f0005b72e1e632 265 PANTHER PTHR10060 1 258 6.7E-139 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.0E-180 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 PANTHER PTHR24222:SF30 1 571 5.3E-275 T 22-04-2016 APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 SUPERFAMILY SSF52540 333 569 9.12E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 SUPERFAMILY SSF90123 7 327 3.79E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 Gene3D G3DSA:3.40.50.300 339 568 4.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 PANTHER PTHR24222 1 571 5.3E-275 T 22-04-2016 APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 Pfam PF00005 ABC transporter 356 502 3.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 SMART SM00382 365 549 6.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 Pfam PF00664 ABC transporter transmembrane region 58 287 1.4E-10 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS04350 db02373052120a8a563b79c72af03b21 573 Gene3D G3DSA:1.20.1560.10 8 327 1.1E-30 T 22-04-2016 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 PANTHER PTHR30302:SF1 1 164 3.5E-70 T 22-04-2016 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 PANTHER PTHR30302 1 164 3.5E-70 T 22-04-2016 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 153 1.3E-55 T 22-04-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 4.4E-46 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 Gene3D G3DSA:3.40.50.1450 1 158 1.2E-52 T 22-04-2016 IPR023430 Peptidase HybD-like domain APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 15 26 8.7E-24 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 56 66 8.7E-24 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 3 15 8.7E-24 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 68 84 8.7E-24 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 PRINTS PR00446 Hydrogen uptake protein signature 35 52 8.7E-24 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 Pfam PF01750 Hydrogenase maturation protease 20 147 1.3E-37 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS17395 c968778514b438e3e79b7d44c0fca2af 164 SUPERFAMILY SSF53163 1 159 3.92E-46 T 22-04-2016 IPR023430 Peptidase HybD-like domain APECO1_RS18975 389919749e70ffc67e9bf46e53468622 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P APECO1_RS18975 389919749e70ffc67e9bf46e53468622 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18975 389919749e70ffc67e9bf46e53468622 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.9E-51 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APECO1_RS18975 389919749e70ffc67e9bf46e53468622 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.536 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APECO1_RS18975 389919749e70ffc67e9bf46e53468622 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-32 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P APECO1_RS18975 389919749e70ffc67e9bf46e53468622 144 Gene3D G3DSA:3.100.10.10 32 143 3.8E-27 T 22-04-2016 APECO1_RS18975 389919749e70ffc67e9bf46e53468622 144 PANTHER PTHR12934 1 144 2.0E-74 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 SUPERFAMILY SSF88659 200 283 4.11E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 55.487 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 PIRSF PIRSF000770 14 284 1.6E-33 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.89E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.89E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.89E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.89E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 Pfam PF04542 Sigma-70 region 2 53 122 5.3E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 Gene3D G3DSA:1.10.10.10 224 282 9.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 Pfam PF04545 Sigma-70, region 4 228 280 7.3E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 PANTHER PTHR30376 2 283 2.5E-131 T 22-04-2016 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 Gene3D G3DSA:1.10.601.10 15 122 1.0E-33 T 22-04-2016 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 7.4E-130 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 SUPERFAMILY SSF88946 15 122 2.75E-38 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS19835 80fc84758c6f971322646c5516b8915f 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.9E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 PANTHER PTHR32089:SF64 51 503 2.2E-147 T 22-04-2016 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 Pfam PF08447 PAS fold 31 113 1.4E-16 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 Gene3D G3DSA:1.10.287.950 274 478 1.1E-52 T 22-04-2016 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 5.4E-12 T 22-04-2016 IPR000014 PAS domain APECO1_RS17870 8b84638022f4615e32cee053477618be 506 SMART SM00086 80 121 2.8E-5 T 22-04-2016 IPR001610 PAC motif APECO1_RS17870 8b84638022f4615e32cee053477618be 506 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 503 2.1E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 Gene3D G3DSA:3.30.450.20 20 114 1.1E-21 T 22-04-2016 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 SMART SM00283 259 506 7.2E-92 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 Pfam PF00672 HAMP domain 188 246 2.3E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 1.7E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 1.7E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 1.7E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.7E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 SUPERFAMILY SSF55785 21 114 8.2E-25 T 22-04-2016 IPR000014 PAS domain APECO1_RS17870 8b84638022f4615e32cee053477618be 506 PANTHER PTHR32089 51 503 2.2E-147 T 22-04-2016 APECO1_RS17870 8b84638022f4615e32cee053477618be 506 SUPERFAMILY SSF58104 233 505 6.67E-61 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SUPERFAMILY SSF158472 200 249 7.45E-5 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Pfam PF00072 Response regulator receiver domain 670 780 3.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SMART SM00304 200 252 1.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 4.56E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 4.56E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 4.56E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 4.56E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 1.0E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 177 6.0E-55 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PANTHER PTHR24423 194 232 4.5E-218 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PANTHER PTHR24423 271 573 4.5E-218 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PANTHER PTHR24423 6 20 4.5E-218 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PANTHER PTHR24423 667 822 4.5E-218 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SUPERFAMILY SSF55874 346 516 1.44E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Gene3D G3DSA:3.30.565.10 343 518 3.5E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SMART SM00073 819 914 1.6E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SUPERFAMILY SSF52172 668 785 3.7E-35 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SUPERFAMILY SSF47384 277 358 1.96E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PANTHER PTHR24423:SF540 194 232 4.5E-218 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PANTHER PTHR24423:SF540 271 573 4.5E-218 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PANTHER PTHR24423:SF540 6 20 4.5E-218 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 PANTHER PTHR24423:SF540 667 822 4.5E-218 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SMART SM00388 292 357 1.2E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Pfam PF01627 Hpt domain 828 908 1.3E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Pfam PF00672 HAMP domain 181 248 1.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SUPERFAMILY SSF47226 764 777 7.33E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SUPERFAMILY SSF47226 808 909 7.33E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Gene3D G3DSA:3.40.50.2300 668 783 5.5E-37 T 22-04-2016 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 2.2E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Gene3D G3DSA:1.10.287.130 284 342 6.5E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SMART SM00448 668 781 4.9E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 SMART SM00387 404 520 4.0E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS15805 ab6d534777ba983972788f6e2429ab7e 918 Gene3D G3DSA:1.20.120.160 820 916 1.7E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 PANTHER PTHR11079 6 323 3.7E-163 T 22-04-2016 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 SUPERFAMILY SSF55120 77 323 3.91E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.4E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 Pfam PF01479 S4 domain 18 63 2.3E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 PANTHER PTHR11079:SF73 6 323 3.7E-163 T 22-04-2016 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 313 1.1E-110 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 SMART SM00363 18 83 1.0E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 Gene3D G3DSA:3.10.290.10 18 66 7.8E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS14705 91aa126626a71c1e7e8062a76ac00289 326 SUPERFAMILY SSF55174 17 69 2.19E-11 T 22-04-2016 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 SUPERFAMILY SSF48179 191 287 2.21E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 PANTHER PTHR11374 1 375 6.7E-248 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 Gene3D G3DSA:1.10.1040.10 198 284 8.1E-36 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 SUPERFAMILY SSF52413 283 387 8.37E-28 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 4.0E-27 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 PIRSF PIRSF500134 1 343 3.0E-120 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 SMART SM00984 300 387 2.2E-13 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 SUPERFAMILY SSF51735 1 194 8.86E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 Gene3D G3DSA:3.40.50.720 1 197 5.8E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 2.9E-8 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 3.6E-32 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 PIRSF PIRSF000124 1 388 1.6E-143 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 9.4E-103 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 Gene3D G3DSA:3.40.50.720 285 388 1.6E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11275 4626c2881344f67e0e9ad7dd6d207efb 388 PANTHER PTHR11374:SF17 1 375 6.7E-248 T 22-04-2016 APECO1_RS03795 96aaeda2e4331957aa280da4475fd18d 161 SUPERFAMILY SSF55040 11 155 4.84E-62 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APECO1_RS03795 96aaeda2e4331957aa280da4475fd18d 161 Gene3D G3DSA:3.30.70.640 3 158 3.5E-70 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APECO1_RS03795 96aaeda2e4331957aa280da4475fd18d 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.996 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 APECO1_RS03795 96aaeda2e4331957aa280da4475fd18d 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.5E-74 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 APECO1_RS03795 96aaeda2e4331957aa280da4475fd18d 161 PANTHER PTHR22960 1 158 1.2E-113 T 22-04-2016 APECO1_RS03795 96aaeda2e4331957aa280da4475fd18d 161 Pfam PF01967 MoaC family 15 150 4.7E-55 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APECO1_RS15945 0cc55ff923e862429efd22af0603e31d 365 Pfam PF03562 MltA specific insert domain 87 257 5.1E-41 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 APECO1_RS15945 0cc55ff923e862429efd22af0603e31d 365 SMART SM00925 125 257 2.4E-70 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 APECO1_RS15945 0cc55ff923e862429efd22af0603e31d 365 SUPERFAMILY SSF50685 25 353 1.46E-116 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APECO1_RS15945 0cc55ff923e862429efd22af0603e31d 365 Pfam PF06725 3D domain 277 354 3.5E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 APECO1_RS15945 0cc55ff923e862429efd22af0603e31d 365 Gene3D G3DSA:2.40.40.10 76 163 1.9E-14 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APECO1_RS15945 0cc55ff923e862429efd22af0603e31d 365 Gene3D G3DSA:2.40.40.10 166 353 4.0E-47 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APECO1_RS15945 0cc55ff923e862429efd22af0603e31d 365 PANTHER PTHR30124 1 356 9.0E-151 T 22-04-2016 APECO1_RS15945 0cc55ff923e862429efd22af0603e31d 365 PANTHER PTHR30124:SF0 1 356 9.0E-151 T 22-04-2016 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.1E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 1.1E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.1E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 1.1E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 PANTHER PTHR11766 4 423 2.4E-224 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 Gene3D G3DSA:3.10.290.10 322 423 3.4E-30 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 SUPERFAMILY SSF55174 327 423 1.57E-20 T 22-04-2016 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 Gene3D G3DSA:1.10.240.10 238 321 6.0E-43 T 22-04-2016 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 Pfam PF01479 S4 domain 359 403 3.9E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.2E-94 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 SUPERFAMILY SSF52374 4 328 8.44E-111 T 22-04-2016 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 SMART SM00363 358 419 3.5E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 Gene3D G3DSA:3.40.50.620 4 237 3.2E-105 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 PANTHER PTHR11766:SF0 4 423 2.4E-224 T 22-04-2016 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 4.8E-152 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APECO1_RS08790 12cceedb646fd8a4c288eb3cf4f94459 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.93 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 Pfam PF00347 Ribosomal protein L6 11 82 1.0E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 Pfam PF00347 Ribosomal protein L6 90 164 6.9E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.5E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 Gene3D G3DSA:3.90.930.12 83 177 2.4E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.551 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 PIRSF PIRSF002162 1 177 6.4E-44 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 Gene3D G3DSA:3.90.930.12 2 82 7.5E-29 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.3E-34 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.3E-34 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.3E-34 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 PANTHER PTHR11655 1 176 1.9E-87 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 PANTHER PTHR11655:SF14 1 176 1.9E-87 T 22-04-2016 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 SUPERFAMILY SSF56053 1 82 9.55E-24 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS18995 fca3d6d18d398b02d8ecfea1adc85eee 177 SUPERFAMILY SSF56053 83 177 1.1E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PANTHER PTHR11946:SF5 608 860 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PANTHER PTHR11946:SF5 1 570 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PANTHER PTHR11946:SF5 880 947 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 932 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 944 4.9E-16 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 SUPERFAMILY SSF46589 884 947 6.8E-16 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Gene3D G3DSA:3.90.740.10 194 360 4.9E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 SUPERFAMILY SSF52374 364 571 5.22E-137 T 22-04-2016 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 SUPERFAMILY SSF52374 1 192 5.22E-137 T 22-04-2016 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 SUPERFAMILY SSF52374 609 641 5.22E-137 T 22-04-2016 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 4.3E-42 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Gene3D G3DSA:1.10.287.380 878 933 7.4E-6 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Gene3D G3DSA:3.40.50.620 3 193 6.7E-142 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Gene3D G3DSA:3.40.50.620 364 571 6.7E-142 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Gene3D G3DSA:3.40.50.620 609 630 6.7E-142 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 SUPERFAMILY SSF50677 191 365 5.23E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.197 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 SUPERFAMILY SSF47323 642 899 2.24E-70 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PANTHER PTHR11946 608 860 0.0 T 22-04-2016 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PANTHER PTHR11946 1 570 0.0 T 22-04-2016 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PANTHER PTHR11946 880 947 0.0 T 22-04-2016 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.7E-228 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.65E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.65E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.65E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.65E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.65E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APECO1_RS24715 673fb0b55dd3d7bf457a821e603b4408 951 Gene3D G3DSA:1.10.730.10 631 816 5.4E-65 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 SUPERFAMILY SSF55124 346 422 1.8E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 417 9.9E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 138 1.5E-12 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.5E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.5E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.702 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 4.1E-303 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 331 1.0E-47 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 539 0.67 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 PANTHER PTHR11493 1 559 1.5E-277 T 22-04-2016 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 Gene3D G3DSA:3.90.480.10 342 422 1.2E-62 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 Gene3D G3DSA:3.90.480.10 74 146 1.2E-62 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 SUPERFAMILY SSF56014 428 559 9.68E-34 T 22-04-2016 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 PANTHER PTHR11493:SF47 1 559 1.5E-277 T 22-04-2016 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 SUPERFAMILY SSF55124 13 142 1.21E-25 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 Gene3D G3DSA:3.30.413.10 430 557 5.1E-34 T 22-04-2016 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 Gene3D G3DSA:3.30.413.10 150 340 2.3E-73 T 22-04-2016 APECO1_RS15675 a391c117cb1eabdc0d5bdcffa65b2683 570 SUPERFAMILY SSF56014 150 344 1.96E-61 T 22-04-2016 APECO1_RS09855 1dd781f35891d04fb0074015506a1d1c 290 Pfam PF05425 Copper resistance protein D 185 284 1.9E-24 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 APECO1_RS09855 1dd781f35891d04fb0074015506a1d1c 290 PANTHER PTHR34820 1 290 1.6E-85 T 22-04-2016 APECO1_RS09855 1dd781f35891d04fb0074015506a1d1c 290 PANTHER PTHR34820:SF2 1 290 1.6E-85 T 22-04-2016 APECO1_RS11980 a382387fa51a8727488d8999357764ae 231 Pfam PF04172 LrgB-like family 12 224 1.2E-79 T 22-04-2016 IPR007300 CidB/LrgB family APECO1_RS11980 a382387fa51a8727488d8999357764ae 231 PANTHER PTHR30249:SF5 1 230 1.8E-114 T 22-04-2016 APECO1_RS11980 a382387fa51a8727488d8999357764ae 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 226 1.5E-110 T 22-04-2016 IPR005261 Conserved hypothetical protein CHP00659 APECO1_RS11980 a382387fa51a8727488d8999357764ae 231 PANTHER PTHR30249 1 230 1.8E-114 T 22-04-2016 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 SUPERFAMILY SSF52540 558 852 4.77E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 Gene3D G3DSA:3.40.50.300 563 790 2.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 Gene3D G3DSA:3.40.50.300 199 379 3.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 780 854 1.6E-13 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 Gene3D G3DSA:1.10.8.60 791 863 7.2E-11 T 22-04-2016 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 331 343 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 74 1.9E-4 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 Gene3D G3DSA:1.10.1780.10 13 125 2.7E-16 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 PANTHER PTHR11638 182 880 0.0 T 22-04-2016 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 PANTHER PTHR11638 2 145 0.0 T 22-04-2016 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 4.3E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 4.3E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 4.3E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 4.3E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 PANTHER PTHR11638:SF11 182 880 0.0 T 22-04-2016 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 PANTHER PTHR11638:SF11 2 145 0.0 T 22-04-2016 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 Pfam PF07724 AAA domain (Cdc48 subfamily) 609 774 8.9E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 240 352 1.7E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 SMART SM01086 780 873 7.8E-13 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 SUPERFAMILY SSF52540 198 528 2.96E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 SUPERFAMILY SSF81923 14 125 1.27E-18 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 SMART SM00382 235 380 6.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 SMART SM00382 609 780 3.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 862 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 APECO1_RS15995 41dff9811fbeba7f81488743358b88c6 881 Gene3D G3DSA:1.10.8.60 382 465 1.0E-29 T 22-04-2016 APECO1_RS00085 c927f27b99759a392fc3d10a68011412 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 26 48 8.8E-14 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS00085 c927f27b99759a392fc3d10a68011412 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 6 24 8.8E-14 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS00085 c927f27b99759a392fc3d10a68011412 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 11 30 - T 22-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 APECO1_RS00085 c927f27b99759a392fc3d10a68011412 50 Pfam PF01848 Hok/gef family 6 47 3.8E-21 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS00085 c927f27b99759a392fc3d10a68011412 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 3 49 1.0E-5 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS11900 47d1039919805e28e6a166eec6c79abb 243 Gene3D G3DSA:1.10.1660.10 4 74 4.9E-20 T 22-04-2016 APECO1_RS11900 47d1039919805e28e6a166eec6c79abb 243 Gene3D G3DSA:1.10.1660.10 109 144 4.9E-20 T 22-04-2016 APECO1_RS11900 47d1039919805e28e6a166eec6c79abb 243 Pfam PF13411 MerR HTH family regulatory protein 4 72 2.3E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS11900 47d1039919805e28e6a166eec6c79abb 243 SMART SM00422 4 73 5.2E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS11900 47d1039919805e28e6a166eec6c79abb 243 PANTHER PTHR30204:SF19 1 243 1.1E-129 T 22-04-2016 APECO1_RS11900 47d1039919805e28e6a166eec6c79abb 243 SUPERFAMILY SSF46955 3 90 2.15E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS11900 47d1039919805e28e6a166eec6c79abb 243 PANTHER PTHR30204 1 243 1.1E-129 T 22-04-2016 APECO1_RS11900 47d1039919805e28e6a166eec6c79abb 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS21320 75e7ada38e15a23c696fd31fc2f9e66b 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.12 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APECO1_RS21320 75e7ada38e15a23c696fd31fc2f9e66b 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.8E-40 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APECO1_RS21320 75e7ada38e15a23c696fd31fc2f9e66b 156 PANTHER PTHR33445 1 156 9.5E-49 T 22-04-2016 APECO1_RS21320 75e7ada38e15a23c696fd31fc2f9e66b 156 SUPERFAMILY SSF81573 63 121 1.7E-15 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APECO1_RS21320 75e7ada38e15a23c696fd31fc2f9e66b 156 Gene3D G3DSA:1.20.5.620 62 122 6.2E-26 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APECO1_RS21320 75e7ada38e15a23c696fd31fc2f9e66b 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.1E-61 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 APECO1_RS03830 df7d4a83f1d0abac6cce314d87db79c2 253 SUPERFAMILY SSF56219 8 251 3.01E-54 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS03830 df7d4a83f1d0abac6cce314d87db79c2 253 PANTHER PTHR15822 1 251 9.3E-120 T 22-04-2016 APECO1_RS03830 df7d4a83f1d0abac6cce314d87db79c2 253 PANTHER PTHR15822:SF7 1 251 9.3E-120 T 22-04-2016 APECO1_RS03830 df7d4a83f1d0abac6cce314d87db79c2 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 13 244 3.8E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS03830 df7d4a83f1d0abac6cce314d87db79c2 253 Gene3D G3DSA:3.60.10.10 3 251 2.4E-24 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS08830 9822f626f8d0228097035e70697a8afa 670 PANTHER PTHR30509 309 643 1.8E-181 T 22-04-2016 APECO1_RS08830 9822f626f8d0228097035e70697a8afa 670 PANTHER PTHR30509 6 258 1.8E-181 T 22-04-2016 APECO1_RS08830 9822f626f8d0228097035e70697a8afa 670 Pfam PF04632 Fusaric acid resistance protein family 20 662 2.7E-175 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APECO1_RS08830 9822f626f8d0228097035e70697a8afa 670 PANTHER PTHR30509:SF1 309 643 1.8E-181 T 22-04-2016 APECO1_RS08830 9822f626f8d0228097035e70697a8afa 670 PANTHER PTHR30509:SF1 6 258 1.8E-181 T 22-04-2016 APECO1_RS23515 871bc0247fd44481964047fde32973d0 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 7.3E-64 T 22-04-2016 IPR004624 PhnA protein APECO1_RS23515 871bc0247fd44481964047fde32973d0 111 Gene3D G3DSA:2.20.25.10 1 40 1.2E-20 T 22-04-2016 APECO1_RS23515 871bc0247fd44481964047fde32973d0 111 Pfam PF03831 PhnA domain 44 111 5.2E-35 T 22-04-2016 IPR013988 PhnA protein, C-terminal APECO1_RS23515 871bc0247fd44481964047fde32973d0 111 Gene3D G3DSA:2.30.30.40 42 110 3.7E-39 T 22-04-2016 APECO1_RS23515 871bc0247fd44481964047fde32973d0 111 SUPERFAMILY SSF57783 1 36 4.76E-14 T 22-04-2016 APECO1_RS23515 871bc0247fd44481964047fde32973d0 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 2.0E-15 T 22-04-2016 IPR013987 PhnA protein, N-terminal APECO1_RS23515 871bc0247fd44481964047fde32973d0 111 PANTHER PTHR30305 1 111 4.1E-89 T 22-04-2016 APECO1_RS23515 871bc0247fd44481964047fde32973d0 111 SUPERFAMILY SSF82057 39 110 7.78E-30 T 22-04-2016 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 SUPERFAMILY SSF54373 180 283 1.53E-24 T 22-04-2016 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 SUPERFAMILY SSF51905 283 392 3.08E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 SUPERFAMILY SSF51905 2 182 3.08E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 Pfam PF01494 FAD binding domain 6 187 3.8E-13 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 PANTHER PTHR10617 1 417 3.3E-192 T 22-04-2016 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 5.9E-6 T 22-04-2016 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 5.9E-6 T 22-04-2016 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 PANTHER PTHR10617:SF117 1 417 3.3E-192 T 22-04-2016 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 Gene3D G3DSA:3.50.50.60 5 175 1.6E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS09120 14df7ec86e2d2c0082172df0b57dde95 429 Gene3D G3DSA:3.50.50.60 294 371 1.6E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 SUPERFAMILY SSF56645 1 227 2.36E-51 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 Gene3D G3DSA:1.20.140.10 218 382 8.7E-59 T 22-04-2016 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 Gene3D G3DSA:1.10.540.10 1 109 5.5E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 Gene3D G3DSA:2.40.110.10 121 217 9.6E-28 T 22-04-2016 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 2.5E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 SUPERFAMILY SSF47203 226 381 4.19E-50 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 1.3E-22 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 PANTHER PTHR10909 1 383 0.0 T 22-04-2016 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 PANTHER PTHR10909:SF333 1 383 0.0 T 22-04-2016 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APECO1_RS09095 f4fbd7821c38d46764fc40e1be629d2d 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 107 3.2E-17 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APECO1_RS20210 c65429528667f0e90bed528377fb73d4 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS20210 c65429528667f0e90bed528377fb73d4 309 PANTHER PTHR10584:SF57 1 305 5.1E-186 T 22-04-2016 APECO1_RS20210 c65429528667f0e90bed528377fb73d4 309 SUPERFAMILY SSF53613 2 302 3.9E-73 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS20210 c65429528667f0e90bed528377fb73d4 309 Pfam PF00294 pfkB family carbohydrate kinase 3 305 1.1E-73 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS20210 c65429528667f0e90bed528377fb73d4 309 Gene3D G3DSA:3.40.1190.20 2 304 1.2E-76 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS20210 c65429528667f0e90bed528377fb73d4 309 PANTHER PTHR10584 1 305 5.1E-186 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PANTHER PTHR24093:SF126 20 704 2.6E-267 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 183 730 1.2E-164 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 SUPERFAMILY SSF55008 49 111 2.88E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 Pfam PF00403 Heavy-metal-associated domain 53 109 8.3E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 Gene3D G3DSA:3.40.50.1000 407 447 2.2E-41 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 Gene3D G3DSA:3.40.50.1000 556 692 2.2E-41 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 639 8.0E-36 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 Pfam PF00122 E1-E2 ATPase 204 425 1.3E-59 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 SUPERFAMILY SSF56784 491 726 1.3E-50 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 SUPERFAMILY SSF56784 433 452 1.3E-50 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 Gene3D G3DSA:3.40.1110.10 448 555 6.2E-22 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 SUPERFAMILY SSF81653 236 333 1.26E-21 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 436 442 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 SUPERFAMILY SSF81665 675 714 4.58E-18 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 SUPERFAMILY SSF81665 334 428 4.58E-18 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 SUPERFAMILY SSF81665 186 237 4.58E-18 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 Gene3D G3DSA:3.30.70.100 49 112 3.6E-20 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 564 4.3E-28 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 283 297 4.3E-28 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 4.3E-28 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 448 4.3E-28 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 4.3E-28 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 4.3E-28 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 Gene3D G3DSA:2.70.150.10 186 334 2.7E-25 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 183 728 2.3E-181 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 206 705 6.4E-79 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 ProSitePatterns PS01047 Heavy-metal-associated domain. 54 83 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PANTHER PTHR24093 20 704 2.6E-267 T 22-04-2016 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 599 615 1.4E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 626 642 1.4E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS19875 30fd98ff736673c05984ecd2204eddcd 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 657 682 1.4E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.273 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 3.7E-169 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 PIRSF PIRSF002936 1 302 4.6E-156 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 SUPERFAMILY SSF52402 6 209 1.96E-75 T 22-04-2016 APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 1.2E-66 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 PANTHER PTHR23293 245 302 2.2E-99 T 22-04-2016 APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 PANTHER PTHR23293 178 211 2.2E-99 T 22-04-2016 APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 PANTHER PTHR23293 1 158 2.2E-99 T 22-04-2016 APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 Gene3D G3DSA:3.40.50.620 2 210 2.5E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS15655 268b695b5e61b86f4b7fabc370214480 302 Gene3D G3DSA:3.40.50.620 244 253 2.5E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 SUPERFAMILY SSF50249 40 124 1.82E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 Pfam PF00575 S1 RNA binding domain 36 118 3.5E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 Pfam PF10150 Ribonuclease E/G family 121 391 1.9E-93 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 PANTHER PTHR30001:SF1 1 840 0.0 T 22-04-2016 APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 Hamap MF_00970 Ribonuclease E [rne]. 1 1047 40.898 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1022 1058 1.8E-16 T 22-04-2016 IPR021968 Polyribonucleotide phosphorylase C-terminal APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 6.2E-172 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 PANTHER PTHR30001 1 840 0.0 T 22-04-2016 APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 SMART SM00316 37 119 9.5E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS05470 e8e43e6f5ae0e40f35b4d3abd6b8d9c4 1061 Gene3D G3DSA:2.40.50.140 31 124 8.1E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS06620 1419b5308693071ece26735758929629 417 Pfam PF07885 Ion channel 149 221 2.8E-15 T 22-04-2016 IPR013099 Potassium channel domain APECO1_RS06620 1419b5308693071ece26735758929629 417 SUPERFAMILY SSF51735 242 384 3.94E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS06620 1419b5308693071ece26735758929629 417 Gene3D G3DSA:1.10.287.70 142 222 5.6E-15 T 22-04-2016 APECO1_RS06620 1419b5308693071ece26735758929629 417 SUPERFAMILY SSF81324 166 261 9.16E-19 T 22-04-2016 APECO1_RS06620 1419b5308693071ece26735758929629 417 SUPERFAMILY SSF81324 79 119 9.16E-19 T 22-04-2016 APECO1_RS06620 1419b5308693071ece26735758929629 417 Pfam PF02254 TrkA-N domain 246 365 7.2E-20 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APECO1_RS06620 1419b5308693071ece26735758929629 417 PANTHER PTHR16254 14 404 1.7E-88 T 22-04-2016 APECO1_RS06620 1419b5308693071ece26735758929629 417 Gene3D G3DSA:3.40.50.720 242 384 4.3E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS06620 1419b5308693071ece26735758929629 417 PANTHER PTHR16254:SF27 14 404 1.7E-88 T 22-04-2016 APECO1_RS12150 0a595b0c6928e3840ca6f769669400fe 328 Gene3D G3DSA:3.40.50.300 5 189 8.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12150 0a595b0c6928e3840ca6f769669400fe 328 PANTHER PTHR13748 4 326 6.9E-84 T 22-04-2016 APECO1_RS12150 0a595b0c6928e3840ca6f769669400fe 328 SUPERFAMILY SSF52540 6 170 4.7E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12150 0a595b0c6928e3840ca6f769669400fe 328 SMART SM00833 240 323 4.8E-5 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APECO1_RS12150 0a595b0c6928e3840ca6f769669400fe 328 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 321 8.4E-6 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APECO1_RS12150 0a595b0c6928e3840ca6f769669400fe 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 171 1.8E-39 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APECO1_RS19840 3ed844d1b49fbe63afcfc819444fda72 352 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 47 352 2.0E-161 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 APECO1_RS19840 3ed844d1b49fbe63afcfc819444fda72 352 Pfam PF02687 FtsX-like permease family 228 342 2.3E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APECO1_RS19840 3ed844d1b49fbe63afcfc819444fda72 352 PANTHER PTHR30489 45 351 2.7E-58 T 22-04-2016 APECO1_RS19840 3ed844d1b49fbe63afcfc819444fda72 352 PIRSF PIRSF003097 50 348 3.9E-110 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 APECO1_RS02885 c3424f6235e657fb4dac6c267d703480 391 PANTHER PTHR11236 111 391 3.7E-171 T 22-04-2016 APECO1_RS02885 c3424f6235e657fb4dac6c267d703480 391 Gene3D G3DSA:3.60.120.10 99 389 1.1E-82 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS02885 c3424f6235e657fb4dac6c267d703480 391 SUPERFAMILY SSF56322 13 389 5.1E-88 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS02885 c3424f6235e657fb4dac6c267d703480 391 PANTHER PTHR11236:SF21 111 391 3.7E-171 T 22-04-2016 APECO1_RS02885 c3424f6235e657fb4dac6c267d703480 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 101 387 1.4E-84 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 APECO1_RS02885 c3424f6235e657fb4dac6c267d703480 391 Pfam PF00425 chorismate binding enzyme 126 380 3.3E-69 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 Gene3D G3DSA:3.40.50.880 3 223 1.4E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 SUPERFAMILY SSF52402 197 420 3.97E-59 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PANTHER PTHR11922 3 522 1.5E-295 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 9.2E-42 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 Gene3D G3DSA:3.40.50.620 224 399 1.7E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PANTHER PTHR11922:SF2 3 522 1.5E-295 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.0E-44 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 3.4E-85 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 Gene3D G3DSA:3.30.300.10 401 525 1.0E-53 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.678 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 SUPERFAMILY SSF54810 405 525 1.44E-51 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.4E-7 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.4E-7 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.4E-7 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 22-04-2016 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 2.0E-156 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 Pfam PF02540 NAD synthase 223 257 1.2E-6 T 22-04-2016 IPR022310 NAD/GMP synthase APECO1_RS14220 cf8c51b1b853cb71e9682a69dce296ef 525 SUPERFAMILY SSF52317 5 204 9.01E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 Gene3D G3DSA:1.10.10.10 5 77 3.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 Pfam PF07729 FCD domain 96 219 2.2E-18 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 PANTHER PTHR11751:SF421 1 112 4.3E-60 T 22-04-2016 APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 PANTHER PTHR11751 1 112 4.3E-60 T 22-04-2016 APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 SMART SM00345 13 72 9.2E-26 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 SUPERFAMILY SSF46785 2 76 2.37E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 Gene3D G3DSA:1.20.120.530 96 225 7.8E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 SUPERFAMILY SSF48008 94 222 9.94E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 SMART SM00895 96 220 9.1E-16 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 1.5E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.2E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS17970 753e682a32a9f28345a8bdc63d9c8479 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.2E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS16210 0b48a9e1f99ef82a0bed4c2f17b46097 72 PANTHER PTHR37011:SF1 1 72 3.2E-39 T 22-04-2016 APECO1_RS16210 0b48a9e1f99ef82a0bed4c2f17b46097 72 SUPERFAMILY SSF50182 21 71 3.11E-18 T 22-04-2016 IPR010920 LSM domain APECO1_RS16210 0b48a9e1f99ef82a0bed4c2f17b46097 72 Gene3D G3DSA:2.30.30.100 19 72 6.5E-31 T 22-04-2016 APECO1_RS16210 0b48a9e1f99ef82a0bed4c2f17b46097 72 PANTHER PTHR37011 1 72 3.2E-39 T 22-04-2016 APECO1_RS16210 0b48a9e1f99ef82a0bed4c2f17b46097 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 4.3E-24 T 22-04-2016 IPR010305 Protein of unknown function DUF903 APECO1_RS16505 c676d7a5e37881537273eca495577ba4 109 PANTHER PTHR34981 2 109 5.5E-32 T 22-04-2016 APECO1_RS16505 c676d7a5e37881537273eca495577ba4 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 36.753 T 22-04-2016 IPR023771 Cell division protein ZapA, eubacteria APECO1_RS16505 c676d7a5e37881537273eca495577ba4 109 PANTHER PTHR34981:SF1 2 109 5.5E-32 T 22-04-2016 APECO1_RS16505 c676d7a5e37881537273eca495577ba4 109 SUPERFAMILY SSF102829 6 94 1.01E-25 T 22-04-2016 IPR007838 Cell division protein ZapA-like APECO1_RS16505 c676d7a5e37881537273eca495577ba4 109 Pfam PF05164 Cell division protein ZapA 6 90 4.2E-20 T 22-04-2016 IPR007838 Cell division protein ZapA-like APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.03E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.03E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.03E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 32.097 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 PANTHER PTHR33280:SF2 1 66 1.1E-37 T 22-04-2016 APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 Pfam PF01197 Ribosomal protein L31 1 65 6.2E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 PANTHER PTHR33280 1 66 1.1E-37 T 22-04-2016 APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 SUPERFAMILY SSF143800 1 66 1.02E-27 T 22-04-2016 APECO1_RS22445 091bb03c9d1e8734ac0da1ad6ed169e2 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 6.9E-35 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18240 b96cf39c0eb08435e480612a3fcc0aab 292 PANTHER PTHR30217:SF8 1 292 3.3E-221 T 22-04-2016 APECO1_RS18240 b96cf39c0eb08435e480612a3fcc0aab 292 PANTHER PTHR30217 1 292 3.3E-221 T 22-04-2016 APECO1_RS18240 b96cf39c0eb08435e480612a3fcc0aab 292 Pfam PF01136 Peptidase family U32 92 198 3.9E-11 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS11815 ab558bff0cfcb5129e1e12a58389a792 180 SUPERFAMILY SSF49401 29 176 4.97E-11 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS11815 ab558bff0cfcb5129e1e12a58389a792 180 Pfam PF00419 Fimbrial protein 32 177 9.4E-9 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS11815 ab558bff0cfcb5129e1e12a58389a792 180 Gene3D G3DSA:2.60.40.1090 28 173 5.0E-10 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS02575 dba67ce6fe09ef8dc28e62a51709afdd 271 PANTHER PTHR30136:SF15 1 268 9.9E-223 T 22-04-2016 APECO1_RS02575 dba67ce6fe09ef8dc28e62a51709afdd 271 PANTHER PTHR30136 1 268 9.9E-223 T 22-04-2016 APECO1_RS02575 dba67ce6fe09ef8dc28e62a51709afdd 271 Pfam PF09339 IclR helix-turn-helix domain 23 73 6.5E-12 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS02575 dba67ce6fe09ef8dc28e62a51709afdd 271 SUPERFAMILY SSF55781 86 266 1.9E-48 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS02575 dba67ce6fe09ef8dc28e62a51709afdd 271 Gene3D G3DSA:3.30.450.40 93 267 5.7E-53 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS02575 dba67ce6fe09ef8dc28e62a51709afdd 271 SUPERFAMILY SSF46785 22 94 9.89E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02575 dba67ce6fe09ef8dc28e62a51709afdd 271 Pfam PF01614 Bacterial transcriptional regulator 141 263 2.4E-41 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APECO1_RS02575 dba67ce6fe09ef8dc28e62a51709afdd 271 SMART SM00346 21 111 3.0E-35 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS02575 dba67ce6fe09ef8dc28e62a51709afdd 271 Gene3D G3DSA:1.10.10.10 19 92 5.7E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS06050 89bc6ce12ae4d4b270b1150670b741f3 247 SUPERFAMILY SSF54001 101 226 4.71E-17 T 22-04-2016 APECO1_RS06050 89bc6ce12ae4d4b270b1150670b741f3 247 PANTHER PTHR34858:SF1 3 230 1.4E-67 T 22-04-2016 APECO1_RS06050 89bc6ce12ae4d4b270b1150670b741f3 247 Pfam PF00877 NlpC/P60 family 111 223 9.6E-14 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS06050 89bc6ce12ae4d4b270b1150670b741f3 247 SUPERFAMILY SSF102712 6 97 3.92E-16 T 22-04-2016 APECO1_RS06050 89bc6ce12ae4d4b270b1150670b741f3 247 Gene3D G3DSA:3.40.140.10 5 114 1.4E-17 T 22-04-2016 APECO1_RS06050 89bc6ce12ae4d4b270b1150670b741f3 247 PANTHER PTHR34858 3 230 1.4E-67 T 22-04-2016 APECO1_RS06050 89bc6ce12ae4d4b270b1150670b741f3 247 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 98 4.3E-13 T 22-04-2016 IPR028090 JAB domain, prokaryotic APECO1_RS06050 89bc6ce12ae4d4b270b1150670b741f3 247 Gene3D G3DSA:3.90.1720.10 115 226 4.4E-17 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS04040 a32617ed1a171b26a69d555cb14a2cb0 303 PANTHER PTHR30465:SF57 18 303 1.9E-244 T 22-04-2016 APECO1_RS04040 a32617ed1a171b26a69d555cb14a2cb0 303 PANTHER PTHR30465 18 303 1.9E-244 T 22-04-2016 APECO1_RS04040 a32617ed1a171b26a69d555cb14a2cb0 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 1.3E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04040 a32617ed1a171b26a69d555cb14a2cb0 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 78 3.6E-15 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APECO1_RS04040 a32617ed1a171b26a69d555cb14a2cb0 303 SUPERFAMILY SSF161098 96 283 1.44E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04040 a32617ed1a171b26a69d555cb14a2cb0 303 Gene3D G3DSA:1.10.3720.10 93 299 2.5E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 78.05 T 22-04-2016 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013|UniPathway: UPA00052 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 PIRSF PIRSF000722 3 397 4.4E-134 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 Pfam PF00871 Acetokinase family 7 386 3.1E-167 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 PRINTS PR00471 Acetate kinase family signature 296 309 2.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 PRINTS PR00471 Acetate kinase family signature 318 334 2.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 PRINTS PR00471 Acetate kinase family signature 169 182 2.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 PRINTS PR00471 Acetate kinase family signature 374 386 2.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 PRINTS PR00471 Acetate kinase family signature 199 220 2.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 PRINTS PR00471 Acetate kinase family signature 7 18 2.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 Gene3D G3DSA:3.30.420.40 7 200 1.2E-11 T 22-04-2016 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 163.382 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 PANTHER PTHR21060:SF17 3 402 0.0 T 22-04-2016 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 SUPERFAMILY SSF53067 5 191 5.61E-65 T 22-04-2016 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 SUPERFAMILY SSF53067 153 392 2.33E-85 T 22-04-2016 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 TIGRFAM TIGR00016 ackA: acetate kinase 4 393 4.7E-172 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 PANTHER PTHR21060 3 402 0.0 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APECO1_RS18060 c254e162f924b9a615e74ec78103a65e 402 Gene3D G3DSA:3.30.420.40 201 391 3.6E-71 T 22-04-2016 APECO1_RS11460 f96e027f60680c93ee7233fbdb28bfec 193 SUPERFAMILY SSF51283 1 193 1.44E-59 T 22-04-2016 IPR029054 dUTPase-like APECO1_RS11460 f96e027f60680c93ee7233fbdb28bfec 193 Gene3D G3DSA:2.70.40.10 1 192 1.1E-60 T 22-04-2016 IPR029054 dUTPase-like APECO1_RS11460 f96e027f60680c93ee7233fbdb28bfec 193 Pfam PF00692 dUTPase 78 185 6.6E-9 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APECO1_RS11460 f96e027f60680c93ee7233fbdb28bfec 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 34.266 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APECO1_RS11460 f96e027f60680c93ee7233fbdb28bfec 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.5E-67 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APECO1_RS11460 f96e027f60680c93ee7233fbdb28bfec 193 PANTHER PTHR11241:SF1 77 192 2.6E-68 T 22-04-2016 APECO1_RS11460 f96e027f60680c93ee7233fbdb28bfec 193 PANTHER PTHR11241:SF1 1 58 2.6E-68 T 22-04-2016 APECO1_RS11460 f96e027f60680c93ee7233fbdb28bfec 193 PANTHER PTHR11241 77 192 2.6E-68 T 22-04-2016 APECO1_RS11460 f96e027f60680c93ee7233fbdb28bfec 193 PANTHER PTHR11241 1 58 2.6E-68 T 22-04-2016 APECO1_RS10015 dabcf7fa2213e7eb9409a93d0890a8e5 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 4.8E-137 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 APECO1_RS10015 dabcf7fa2213e7eb9409a93d0890a8e5 247 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 3 242 42.968 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 APECO1_RS10015 dabcf7fa2213e7eb9409a93d0890a8e5 247 PANTHER PTHR10108:SF809 4 241 6.3E-117 T 22-04-2016 APECO1_RS10015 dabcf7fa2213e7eb9409a93d0890a8e5 247 SUPERFAMILY SSF53335 20 242 1.09E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS10015 dabcf7fa2213e7eb9409a93d0890a8e5 247 PANTHER PTHR10108 4 241 6.3E-117 T 22-04-2016 APECO1_RS10015 dabcf7fa2213e7eb9409a93d0890a8e5 247 Gene3D G3DSA:3.40.50.150 19 241 6.0E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS10015 dabcf7fa2213e7eb9409a93d0890a8e5 247 Pfam PF13649 Methyltransferase domain 60 158 3.7E-14 T 22-04-2016 APECO1_RS10015 dabcf7fa2213e7eb9409a93d0890a8e5 247 PIRSF PIRSF006325 1 243 3.8E-135 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 APECO1_RS23495 39cc6931f11f7f0d47fb1af6e1ff7c26 259 PANTHER PTHR30043 1 256 8.7E-119 T 22-04-2016 APECO1_RS23495 39cc6931f11f7f0d47fb1af6e1ff7c26 259 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 258 8.9E-94 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 APECO1_RS23495 39cc6931f11f7f0d47fb1af6e1ff7c26 259 PANTHER PTHR30043:SF1 1 256 8.7E-119 T 22-04-2016 APECO1_RS23495 39cc6931f11f7f0d47fb1af6e1ff7c26 259 SUPERFAMILY SSF161098 62 253 2.22E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23495 39cc6931f11f7f0d47fb1af6e1ff7c26 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 1.0E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23495 39cc6931f11f7f0d47fb1af6e1ff7c26 259 Gene3D G3DSA:1.10.3720.10 60 258 1.6E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82693 670 719 2.62E-24 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82693 806 854 2.62E-24 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82866 297 495 1.31E-48 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 6.5E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 6.5E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 6.5E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 6.5E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 6.5E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 6.5E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 6.5E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.5E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 6.5E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82714 720 806 2.22E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1034 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 Pfam PF00873 AcrB/AcrD/AcrF family 2 1024 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82866 835 1024 6.28E-39 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PANTHER PTHR32063:SF13 1 1035 0.0 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82693 563 669 2.62E-28 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82693 39 132 1.05E-27 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 Gene3D G3DSA:3.30.70.1430 565 669 2.1E-33 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 Gene3D G3DSA:3.30.70.1430 39 140 3.7E-36 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 Gene3D G3DSA:3.30.2090.10 182 276 3.2E-30 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82693 275 331 4.34E-21 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82693 136 183 4.34E-21 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 Gene3D G3DSA:1.10.3850.10 281 498 1.1E-58 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 Gene3D G3DSA:1.10.3850.10 813 1025 6.9E-51 T 22-04-2016 APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 Gene3D G3DSA:3.30.2090.10 720 805 1.5E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 SUPERFAMILY SSF82714 183 273 3.4E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS07165 28d46755f83f69f5772ebb68dce24f84 1035 PANTHER PTHR32063 1 1035 0.0 T 22-04-2016 APECO1_RS07310 c05c9435f57382758b7f78d33024fb3a 465 PANTHER PTHR38605 1 465 1.4E-262 T 22-04-2016 APECO1_RS07310 c05c9435f57382758b7f78d33024fb3a 465 PANTHER PTHR38605:SF1 1 465 1.4E-262 T 22-04-2016 APECO1_RS07310 c05c9435f57382758b7f78d33024fb3a 465 PIRSF PIRSF019381 1 465 5.0E-215 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein APECO1_RS07310 c05c9435f57382758b7f78d33024fb3a 465 Pfam PF04317 YcjX-like family, DUF463 20 464 6.4E-184 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein APECO1_RS00460 4295c1596b87827cb4613cc398893c08 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 220 2.4E-21 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APECO1_RS00460 4295c1596b87827cb4613cc398893c08 588 Gene3D G3DSA:3.90.1310.10 142 241 2.4E-33 T 22-04-2016 APECO1_RS00460 4295c1596b87827cb4613cc398893c08 588 SUPERFAMILY SSF56601 235 563 1.61E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS00460 4295c1596b87827cb4613cc398893c08 588 PANTHER PTHR30627 8 587 3.4E-255 T 22-04-2016 APECO1_RS00460 4295c1596b87827cb4613cc398893c08 588 SUPERFAMILY SSF56519 63 234 6.93E-47 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APECO1_RS00460 4295c1596b87827cb4613cc398893c08 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 2.6E-82 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APECO1_RS00460 4295c1596b87827cb4613cc398893c08 588 PANTHER PTHR30627:SF1 8 587 3.4E-255 T 22-04-2016 APECO1_RS00460 4295c1596b87827cb4613cc398893c08 588 Gene3D G3DSA:3.40.710.10 242 560 3.2E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 263 269 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 Pfam PF02384 N-6 DNA Methylase 123 449 3.0E-99 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 Gene3D G3DSA:3.40.50.150 149 382 4.2E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 Pfam PF12161 HsdM N-terminal domain 6 93 6.7E-9 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 PANTHER PTHR30195 66 529 1.5E-147 T 22-04-2016 APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 SUPERFAMILY SSF53335 4 520 2.5E-138 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 PANTHER PTHR30195:SF2 66 529 1.5E-147 T 22-04-2016 APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 171 185 3.83E-20 T 22-04-2016 APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 260 272 3.83E-20 T 22-04-2016 APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 287 311 3.83E-20 T 22-04-2016 APECO1_RS25060 ee62ab6f99debe0f25fecab37c515193 529 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 147 163 3.83E-20 T 22-04-2016 APECO1_RS00565 55ea5c35f20103445d4ab0b73fb015dc 461 Gene3D G3DSA:3.30.450.90 52 186 8.1E-44 T 22-04-2016 APECO1_RS00565 55ea5c35f20103445d4ab0b73fb015dc 461 Gene3D G3DSA:3.40.50.300 192 457 2.1E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00565 55ea5c35f20103445d4ab0b73fb015dc 461 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 281 295 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APECO1_RS00565 55ea5c35f20103445d4ab0b73fb015dc 461 PANTHER PTHR30258 72 461 8.6E-187 T 22-04-2016 APECO1_RS00565 55ea5c35f20103445d4ab0b73fb015dc 461 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 8 68 1.8E-5 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 APECO1_RS00565 55ea5c35f20103445d4ab0b73fb015dc 461 PANTHER PTHR30258:SF1 72 461 8.6E-187 T 22-04-2016 APECO1_RS00565 55ea5c35f20103445d4ab0b73fb015dc 461 Pfam PF00437 Type II/IV secretion system protein 89 353 1.2E-82 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APECO1_RS00565 55ea5c35f20103445d4ab0b73fb015dc 461 SUPERFAMILY SSF52540 79 454 1.32E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16165 e40d3ff02ef554659c29b9d5b5939339 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS16165 e40d3ff02ef554659c29b9d5b5939339 156 SUPERFAMILY SSF54523 8 133 5.89E-7 T 22-04-2016 APECO1_RS16165 e40d3ff02ef554659c29b9d5b5939339 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 7.2E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS16165 e40d3ff02ef554659c29b9d5b5939339 156 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 24 2.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS22890 2f9070a60f4d85b5d2404effaa9482d4 574 PIRSF PIRSF000719 1 574 2.8E-299 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APECO1_RS22890 2f9070a60f4d85b5d2404effaa9482d4 574 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.542 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APECO1_RS22890 2f9070a60f4d85b5d2404effaa9482d4 574 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 2.8E-243 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APECO1_RS22890 2f9070a60f4d85b5d2404effaa9482d4 574 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 573 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APECO1_RS22890 2f9070a60f4d85b5d2404effaa9482d4 574 PANTHER PTHR39559 1 574 1.5E-248 T 22-04-2016 APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 Pfam PF00258 Flavodoxin 256 388 4.5E-12 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 Gene3D G3DSA:3.60.15.10 4 246 6.4E-91 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 Pfam PF00753 Metallo-beta-lactamase superfamily 34 174 2.8E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 PRINTS PR00163 Rubredoxin signature 425 441 5.8E-7 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 PRINTS PR00163 Rubredoxin signature 455 471 5.8E-7 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 SUPERFAMILY SSF57802 425 474 3.87E-18 T 22-04-2016 APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 SUPERFAMILY SSF52218 251 396 5.32E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 SMART SM00849 34 210 1.1E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 SUPERFAMILY SSF56281 8 285 3.54E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 PANTHER PTHR32145:SF2 1 469 6.1E-244 T 22-04-2016 APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 475 93.691 T 22-04-2016 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 UniPathway: UPA00638 APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 Gene3D G3DSA:2.20.28.10 425 473 3.6E-21 T 22-04-2016 IPR004039 Rubredoxin-type fold APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 Pfam PF00301 Rubredoxin 425 471 7.9E-21 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 PANTHER PTHR32145 1 469 6.1E-244 T 22-04-2016 APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 Gene3D G3DSA:3.40.50.360 249 394 9.3E-52 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15425 3b2dc44441a11baf36f6c9836f2150c2 479 PIRSF PIRSF005243 1 399 4.1E-163 T 22-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 980 1002 4.7E-10 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 890 911 3.4E-6 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 533 555 6.5E-8 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1407 1427 1.2E-10 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 689 711 2.0E-6 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1286 1306 2.8E-10 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1150 1170 1.5E-6 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 391 414 2.0E-6 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 611 633 7.8E-9 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 529 560 3.4E-5 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 1189 1307 6.54E-24 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 566 638 7.32E-5 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 1351 1429 7.19E-18 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.0E-9 T 22-04-2016 IPR024973 ESPR domain APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 1048 1173 3.79E-21 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:1.20.5.170 1296 1358 5.0E-11 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:1.20.5.170 902 978 1.4E-6 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:1.20.5.170 979 1046 3.3E-11 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:1.20.5.170 607 661 4.2E-11 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:1.20.5.170 529 585 8.3E-12 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:1.20.5.170 685 780 4.3E-6 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 267 418 1.07E-33 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843:SF2 1407 1583 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843:SF2 1 370 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843:SF2 1100 1356 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843:SF2 955 1078 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843:SF2 399 729 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843:SF2 752 933 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 266 290 3.8E-6 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1052 1078 1.7E-6 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 111 137 1.9E-4 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 209 235 1.5E-4 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 335 360 5.0E-6 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 362 388 2.0E-5 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1066 1092 1.3E-8 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 308 332 9.5E-5 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1378 1402 1.3E-4 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 126 151 6.6E-6 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1364 1390 2.8E-7 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 237 263 2.8E-4 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF05658 Head domain of trimeric autotransporter adhesin 278 304 4.0E-6 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843 1407 1583 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843 1 370 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843 1100 1356 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843 955 1078 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843 399 729 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 PANTHER PTHR35843 752 933 5.5E-207 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 822 1005 9.02E-10 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 1446 1482 1.57E-5 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 720 816 2.75E-5 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 877 901 5.0E-5 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 1359 1429 2.0E-23 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 1049 1172 4.8E-22 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 65 205 3.4E-24 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 1454 1484 4.9E-4 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 267 418 2.5E-39 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 781 815 7.4E-4 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 1187 1295 4.8E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 478 512 1.1E-4 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:2.150.10.10 822 845 5.0E-5 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Pfam PF03895 YadA-like C-terminal region 1507 1583 3.7E-24 T 22-04-2016 IPR005594 YadA-like, C-terminal APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 183 290 1.96E-17 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 Gene3D G3DSA:3.30.1300.30 1492 1583 1.5E-34 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF101967 64 194 1.24E-16 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF54523 1419 1427 8.16E-26 T 22-04-2016 APECO1_RS20620 6bc8c0942da8810569c71db1ade65f99 1583 SUPERFAMILY SSF54523 1492 1583 8.16E-26 T 22-04-2016 APECO1_RS14900 562075bd1366888f86b2819fcfe5a395 182 PIRSF PIRSF012337 1 182 4.7E-58 T 22-04-2016 IPR014462 Phage-associated protein Gp45 APECO1_RS14900 562075bd1366888f86b2819fcfe5a395 182 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 125 4.7E-14 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 APECO1_RS14900 562075bd1366888f86b2819fcfe5a395 182 Pfam PF06890 Bacteriophage Mu Gp45 protein 16 164 6.1E-48 T 22-04-2016 IPR014462 Phage-associated protein Gp45 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 Gene3D G3DSA:1.10.10.10 2 88 2.0E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 PANTHER PTHR30537 1 305 2.1E-162 T 22-04-2016 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 Gene3D G3DSA:3.40.190.10 94 179 7.7E-37 T 22-04-2016 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 SUPERFAMILY SSF46785 3 87 4.75E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.4E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.4E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.4E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 Gene3D G3DSA:3.40.190.10 180 258 2.4E-17 T 22-04-2016 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 PANTHER PTHR30537:SF26 1 305 2.1E-162 T 22-04-2016 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 SUPERFAMILY SSF53850 93 295 6.05E-42 T 22-04-2016 APECO1_RS15920 b264c05bcf652e64087840e0bcf76319 305 Pfam PF03466 LysR substrate binding domain 91 292 5.5E-42 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 Gene3D G3DSA:3.90.76.10 90 173 1.1E-13 T 22-04-2016 APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 Gene3D G3DSA:3.40.190.10 174 319 4.7E-31 T 22-04-2016 APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 PANTHER PTHR30290 1 354 3.8E-253 T 22-04-2016 APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 PANTHER PTHR30290 379 599 3.8E-253 T 22-04-2016 APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 Gene3D G3DSA:3.10.105.10 320 558 1.5E-45 T 22-04-2016 APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 PANTHER PTHR30290:SF2 1 354 3.8E-253 T 22-04-2016 APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 PANTHER PTHR30290:SF2 379 599 3.8E-253 T 22-04-2016 APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 504 1.3E-69 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 PIRSF PIRSF002741 3 592 2.3E-183 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APECO1_RS12170 270841e2d4848c5b18a349ec8151649a 604 SUPERFAMILY SSF53850 49 590 5.07E-109 T 22-04-2016 APECO1_RS05185 c50d76c28c39ace67b4bde8d0217b0f9 455 SUPERFAMILY SSF55073 287 442 9.42E-44 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS05185 c50d76c28c39ace67b4bde8d0217b0f9 455 Gene3D G3DSA:3.30.70.270 284 445 4.2E-49 T 22-04-2016 APECO1_RS05185 c50d76c28c39ace67b4bde8d0217b0f9 455 Pfam PF17158 Membrane-associated sensor, integral membrane domain 40 274 4.5E-71 T 22-04-2016 IPR033424 Membrane-associated sensor domain APECO1_RS05185 c50d76c28c39ace67b4bde8d0217b0f9 455 PANTHER PTHR10799 1 451 5.6E-23 T 22-04-2016 APECO1_RS05185 c50d76c28c39ace67b4bde8d0217b0f9 455 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 281 443 4.5E-46 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS05185 c50d76c28c39ace67b4bde8d0217b0f9 455 Pfam PF00990 Diguanylate cyclase, GGDEF domain 282 439 1.6E-49 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS05185 c50d76c28c39ace67b4bde8d0217b0f9 455 PANTHER PTHR10799:SF750 1 451 5.6E-23 T 22-04-2016 APECO1_RS05185 c50d76c28c39ace67b4bde8d0217b0f9 455 SMART SM00267 271 443 1.0E-67 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.2E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.2E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.2E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.2E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.2E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 SUPERFAMILY SSF46609 1 84 1.22E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 Gene3D G3DSA:1.10.287.990 20 82 3.4E-26 T 22-04-2016 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.5E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 PANTHER PTHR11404:SF8 1 193 1.8E-112 T 22-04-2016 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 SUPERFAMILY SSF54719 84 192 2.23E-45 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 2.1E-40 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 PIRSF PIRSF000349 1 193 1.7E-87 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 PANTHER PTHR11404 1 193 1.8E-112 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS08885 ce422a1e705d91080141d9bb318b50ce 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PANTHER PTHR22912 1 459 2.2E-275 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 SUPERFAMILY SSF55424 343 466 8.42E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 Gene3D G3DSA:3.50.50.60 152 271 7.6E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 Gene3D G3DSA:3.30.390.30 336 462 2.3E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 SUPERFAMILY SSF51905 2 338 6.17E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.8E-41 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.8E-41 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 3.8E-41 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.8E-41 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.8E-41 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 4.1E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PANTHER PTHR22912:SF160 1 459 2.2E-275 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PIRSF PIRSF000350 1 468 3.2E-87 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 5.9E-151 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 3.7E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.3E-69 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.3E-69 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.3E-69 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.3E-69 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.3E-69 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.3E-69 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.3E-69 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.3E-69 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.3E-69 T 22-04-2016 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 Gene3D G3DSA:3.50.50.60 272 335 3.6E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS00640 631f444eb319baaf657cb7836d934fa5 474 Gene3D G3DSA:3.50.50.60 6 149 3.6E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS17210 e1f4bb3c0d6d9d39fb7f63ea222a90e1 123 Gene3D G3DSA:3.30.1300.30 32 116 6.8E-28 T 22-04-2016 APECO1_RS17210 e1f4bb3c0d6d9d39fb7f63ea222a90e1 123 PANTHER PTHR38779 1 120 9.0E-28 T 22-04-2016 APECO1_RS17210 e1f4bb3c0d6d9d39fb7f63ea222a90e1 123 Pfam PF13633 Prokaryotic N-terminal methylation site 2 26 6.8E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17210 e1f4bb3c0d6d9d39fb7f63ea222a90e1 123 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17210 e1f4bb3c0d6d9d39fb7f63ea222a90e1 123 PANTHER PTHR38779:SF2 1 120 9.0E-28 T 22-04-2016 APECO1_RS17210 e1f4bb3c0d6d9d39fb7f63ea222a90e1 123 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 25 1.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17210 e1f4bb3c0d6d9d39fb7f63ea222a90e1 123 TIGRFAM TIGR01707 gspI: type II secretion system protein I 4 102 3.0E-25 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 APECO1_RS17210 e1f4bb3c0d6d9d39fb7f63ea222a90e1 123 SUPERFAMILY SSF54523 37 114 1.22E-18 T 22-04-2016 APECO1_RS17210 e1f4bb3c0d6d9d39fb7f63ea222a90e1 123 Pfam PF02501 Type II secretion system (T2SS), protein I 38 115 1.6E-18 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 APECO1_RS07265 3281fb391556c19325745e71a515f311 280 SUPERFAMILY SSF161098 5 280 3.66E-70 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07265 3281fb391556c19325745e71a515f311 280 PANTHER PTHR32243 1 280 1.1E-132 T 22-04-2016 APECO1_RS07265 3281fb391556c19325745e71a515f311 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 269 1.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07265 3281fb391556c19325745e71a515f311 280 Gene3D G3DSA:1.10.3720.10 4 264 4.2E-67 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07265 3281fb391556c19325745e71a515f311 280 PANTHER PTHR32243:SF18 1 280 1.1E-132 T 22-04-2016 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 Gene3D G3DSA:1.20.1250.20 13 199 2.1E-40 T 22-04-2016 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 Gene3D G3DSA:1.20.1250.20 210 399 1.4E-27 T 22-04-2016 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 114 135 9.9E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 144 166 9.9E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 25 41 9.9E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 87 111 9.9E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 348 371 9.9E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 PRINTS PR01035 Tetracycline resistance protein signature 313 333 9.9E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 3 406 49.348 T 22-04-2016 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 PANTHER PTHR23504:SF14 1 403 7.7E-125 T 22-04-2016 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 PANTHER PTHR23504 1 403 7.7E-125 T 22-04-2016 APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 SUPERFAMILY SSF103473 11 402 1.05E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS05315 faf856f858dfd8160981e3ccce301101 408 Pfam PF07690 Major Facilitator Superfamily 20 263 5.3E-33 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SUPERFAMILY SSF143517 992 1144 1.06E-44 T 22-04-2016 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 Gene3D G3DSA:3.40.50.300 586 783 5.8E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 PANTHER PTHR14025 383 1145 0.0 T 22-04-2016 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SUPERFAMILY SSF52540 779 987 2.95E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 Gene3D G3DSA:3.40.50.300 795 960 2.6E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 Gene3D G3DSA:3.30.2060.10 130 207 1.8E-13 T 22-04-2016 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SMART SM00982 1005 1105 1.2E-49 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 Pfam PF03461 TRCF domain 1006 1098 2.4E-28 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SUPERFAMILY SSF52540 351 463 7.17E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SUPERFAMILY SSF141259 467 545 1.57E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SMART SM01058 476 573 3.1E-50 T 22-04-2016 IPR003711 CarD-like/TRCF domain APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SUPERFAMILY SSF52540 520 780 5.4E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 2.3E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SUPERFAMILY SSF52540 10 343 9.11E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 1.7E-18 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 7.5E-21 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SMART SM00487 597 787 6.4E-36 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1125 28.902 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 PANTHER PTHR14025:SF21 383 1145 0.0 T 22-04-2016 APECO1_RS05620 1aca3b4dca0b84f1c8b8af0dbdd7a22d 1148 SMART SM00490 823 907 1.6E-19 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS21240 9582c223a60723712d2bf79943e7cf3b 538 Gene3D G3DSA:2.40.170.10 125 538 1.1E-115 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APECO1_RS21240 9582c223a60723712d2bf79943e7cf3b 538 PANTHER PTHR38762 101 538 4.1E-195 T 22-04-2016 APECO1_RS21240 9582c223a60723712d2bf79943e7cf3b 538 Pfam PF11471 Maltoporin periplasmic N-terminal extension 3 57 1.2E-14 T 22-04-2016 IPR021570 LamB-type porin N-terminal domain APECO1_RS21240 9582c223a60723712d2bf79943e7cf3b 538 Pfam PF02264 LamB porin 127 538 3.1E-82 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APECO1_RS21240 9582c223a60723712d2bf79943e7cf3b 538 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 132 533 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APECO1_RS21240 9582c223a60723712d2bf79943e7cf3b 538 SUPERFAMILY SSF56935 125 538 4.09E-98 T 22-04-2016 APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 5.6E-295 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 Pfam PF12848 ABC transporter 230 306 2.4E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 Gene3D G3DSA:3.40.50.300 322 535 2.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 PANTHER PTHR19211 3 555 0.0 T 22-04-2016 APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 PANTHER PTHR19211:SF7 3 555 0.0 T 22-04-2016 APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 Gene3D G3DSA:3.40.50.300 11 109 7.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 Gene3D G3DSA:3.40.50.300 141 286 7.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 SUPERFAMILY SSF52540 302 526 3.89E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 Pfam PF00005 ABC transporter 340 473 3.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 Pfam PF00005 ABC transporter 22 191 1.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 SUPERFAMILY SSF52540 11 243 2.27E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 SMART SM00382 348 522 9.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS25610 21ec651a6e478a7b5315f56f5fb4fe21 555 SMART SM00382 31 236 3.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS15930 8ea033aa77dc7746ca3c16091da67d7c 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APECO1_RS15930 8ea033aa77dc7746ca3c16091da67d7c 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 1.6E-233 T 22-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APECO1_RS15930 8ea033aa77dc7746ca3c16091da67d7c 401 SUPERFAMILY SSF53383 5 397 6.65E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS15930 8ea033aa77dc7746ca3c16091da67d7c 401 PANTHER PTHR11601 1 401 0.0 T 22-04-2016 APECO1_RS15930 8ea033aa77dc7746ca3c16091da67d7c 401 Pfam PF00266 Aminotransferase class-V 21 388 1.1E-141 T 22-04-2016 IPR000192 Aminotransferase class V domain APECO1_RS15930 8ea033aa77dc7746ca3c16091da67d7c 401 Gene3D G3DSA:3.90.1150.10 281 393 4.5E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS15930 8ea033aa77dc7746ca3c16091da67d7c 401 PANTHER PTHR11601:SF44 1 401 0.0 T 22-04-2016 APECO1_RS15930 8ea033aa77dc7746ca3c16091da67d7c 401 Gene3D G3DSA:3.40.640.10 32 280 7.5E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS04860 6dbc9e9c4960df9634ecc73b2916c420 150 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 31.297 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 APECO1_RS04860 6dbc9e9c4960df9634ecc73b2916c420 150 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 4.0E-72 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 APECO1_RS04860 6dbc9e9c4960df9634ecc73b2916c420 150 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 2.6E-75 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 Gene3D G3DSA:3.90.1150.10 255 375 2.1E-52 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 PIRSF PIRSF005572 2 384 1.9E-144 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 Pfam PF00266 Aminotransferase class-V 5 368 1.3E-89 T 22-04-2016 IPR000192 Aminotransferase class V domain APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 56.355 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 SUPERFAMILY SSF53383 5 391 4.52E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 PANTHER PTHR11601 4 404 9.3E-248 T 22-04-2016 APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 Gene3D G3DSA:3.40.640.10 17 254 3.7E-99 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.5E-236 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APECO1_RS14350 858f1fe35d5f51a75188c72882269fe8 404 PANTHER PTHR11601:SF45 4 404 9.3E-248 T 22-04-2016 APECO1_RS00960 009b981acb9ddf0a9dd6996be35184c1 382 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 1.9E-156 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APECO1_RS00960 009b981acb9ddf0a9dd6996be35184c1 382 PANTHER PTHR30372 1 380 6.4E-148 T 22-04-2016 APECO1_RS00960 009b981acb9ddf0a9dd6996be35184c1 382 PANTHER PTHR30372:SF0 1 380 6.4E-148 T 22-04-2016 APECO1_RS00960 009b981acb9ddf0a9dd6996be35184c1 382 SUPERFAMILY SSF53756 9 361 4.71E-29 T 22-04-2016 APECO1_RS00960 009b981acb9ddf0a9dd6996be35184c1 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 3.2E-191 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APECO1_RS00960 009b981acb9ddf0a9dd6996be35184c1 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 43.644 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APECO1_RS00960 009b981acb9ddf0a9dd6996be35184c1 382 Gene3D G3DSA:3.40.50.2000 172 358 6.6E-6 T 22-04-2016 APECO1_RS16755 1ec15bf8020179e500e9c92c944b4e14 239 Pfam PF11101 Protein of unknown function (DUF2884) 24 235 9.5E-41 T 22-04-2016 IPR021307 Protein of unknown function DUF2884 APECO1_RS05505 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Gene3D G3DSA:3.40.47.10 1 160 2.5E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS05505 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 SUPERFAMILY SSF53901 3 317 1.35E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS05505 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 6.8E-152 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APECO1_RS05505 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.8E-29 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APECO1_RS05505 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 PANTHER PTHR18919 26 317 7.6E-129 T 22-04-2016 APECO1_RS05505 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 PANTHER PTHR18919:SF109 26 317 7.6E-129 T 22-04-2016 APECO1_RS05505 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.49 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APECO1_RS05505 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 5.0E-37 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APECO1_RS05505 982e8fe64b3c7e5a1ad44dbbd2c9d022 317 Gene3D G3DSA:3.40.47.10 161 316 4.4E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12705 f71f2fb7813aea0d11f312f70d3c5464 166 Gene3D G3DSA:3.40.30.10 86 164 6.0E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS12705 f71f2fb7813aea0d11f312f70d3c5464 166 PANTHER PTHR10371:SF7 10 166 1.1E-121 T 22-04-2016 APECO1_RS12705 f71f2fb7813aea0d11f312f70d3c5464 166 PANTHER PTHR10371 10 166 1.1E-121 T 22-04-2016 APECO1_RS12705 f71f2fb7813aea0d11f312f70d3c5464 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APECO1_RS12705 f71f2fb7813aea0d11f312f70d3c5464 166 SUPERFAMILY SSF52833 15 165 3.91E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS12705 f71f2fb7813aea0d11f312f70d3c5464 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 166 3.8E-51 T 22-04-2016 APECO1_RS12705 f71f2fb7813aea0d11f312f70d3c5464 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 7.2E-53 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APECO1_RS12705 f71f2fb7813aea0d11f312f70d3c5464 166 PIRSF PIRSF000216 1 166 6.5E-54 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 PANTHER PTHR30009:SF2 6 477 9.2E-264 T 22-04-2016 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 1.5E-90 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 PANTHER PTHR30009 6 477 9.2E-264 T 22-04-2016 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 Gene3D G3DSA:3.30.1360.60 399 474 5.8E-28 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 6.7E-85 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 2.6E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 7.3E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 SUPERFAMILY SSF55604 401 474 6.67E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS05555 bcf0eda5bf6c0577bd8206fa6c2906b2 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 1.2E-235 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS01865 72599e43833960a5c08e3fd297db8c0b 398 SUPERFAMILY SSF53448 32 289 8.59E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS01865 72599e43833960a5c08e3fd297db8c0b 398 Pfam PF00535 Glycosyl transferase family 2 34 198 1.1E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS01865 72599e43833960a5c08e3fd297db8c0b 398 Gene3D G3DSA:3.90.550.10 35 260 6.7E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS01865 72599e43833960a5c08e3fd297db8c0b 398 PANTHER PTHR10859:SF95 32 343 1.2E-112 T 22-04-2016 APECO1_RS01865 72599e43833960a5c08e3fd297db8c0b 398 PANTHER PTHR10859 32 343 1.2E-112 T 22-04-2016 APECO1_RS20360 23ae36a769a44a263aabd52f6a274944 187 SUPERFAMILY SSF48150 2 184 5.69E-84 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APECO1_RS20360 23ae36a769a44a263aabd52f6a274944 187 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 181 4.5E-97 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 APECO1_RS20360 23ae36a769a44a263aabd52f6a274944 187 PANTHER PTHR30037:SF4 1 183 9.9E-120 T 22-04-2016 APECO1_RS20360 23ae36a769a44a263aabd52f6a274944 187 PANTHER PTHR30037 1 183 9.9E-120 T 22-04-2016 APECO1_RS20360 23ae36a769a44a263aabd52f6a274944 187 Pfam PF03352 Methyladenine glycosylase 6 181 8.8E-83 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 APECO1_RS20360 23ae36a769a44a263aabd52f6a274944 187 Gene3D G3DSA:1.10.340.30 1 182 3.2E-89 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 Gene3D G3DSA:3.40.50.720 1 163 8.0E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 SUPERFAMILY SSF55347 155 317 4.17E-57 T 22-04-2016 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 SMART SM00846 3 155 2.6E-83 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 PIRSF PIRSF000149 1 338 1.1E-134 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 2.7E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 2.7E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 2.7E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 2.7E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 2.7E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 PANTHER PTHR10836 1 339 2.3E-254 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 4.2E-54 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 PANTHER PTHR10836:SF47 1 339 2.3E-254 T 22-04-2016 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 SUPERFAMILY SSF51735 1 179 6.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 3.9E-198 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 66.041 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 Gene3D G3DSA:3.30.360.10 164 318 7.8E-61 T 22-04-2016 APECO1_RS16570 9544354f324e3a64547edfe7520dc9c9 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 2.8E-54 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS08065 30d0e20b16e81c82ae5ba3db511cb432 58 Gene3D G3DSA:3.40.30.10 2 57 4.6E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS08065 30d0e20b16e81c82ae5ba3db511cb432 58 SUPERFAMILY SSF52833 2 57 8.36E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS18475 1d0894cefc30546d4e4d73c49a6bd6a9 284 PIRSF PIRSF005052 1 284 4.7E-114 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 APECO1_RS18475 1d0894cefc30546d4e4d73c49a6bd6a9 284 SUPERFAMILY SSF52540 2 151 4.9E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18475 1d0894cefc30546d4e4d73c49a6bd6a9 284 Gene3D G3DSA:3.40.50.300 2 150 5.9E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18475 1d0894cefc30546d4e4d73c49a6bd6a9 284 PANTHER PTHR30448:SF0 1 283 1.5E-156 T 22-04-2016 APECO1_RS18475 1d0894cefc30546d4e4d73c49a6bd6a9 284 Pfam PF03668 P-loop ATPase protein family 1 282 1.2E-146 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 APECO1_RS18475 1d0894cefc30546d4e4d73c49a6bd6a9 284 PANTHER PTHR30448 1 283 1.5E-156 T 22-04-2016 APECO1_RS18475 1d0894cefc30546d4e4d73c49a6bd6a9 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.962 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 APECO1_RS10660 2721d2b7c98e6be82a42716d3c08007f 71 PIRSF PIRSF030786 1 71 1.3E-43 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS10660 2721d2b7c98e6be82a42716d3c08007f 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 1.3E-44 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS24705 827a4c914b46c0826d81bee7d3fa3329 167 PANTHER PTHR13947:SF7 11 167 1.2E-61 T 22-04-2016 APECO1_RS24705 827a4c914b46c0826d81bee7d3fa3329 167 Gene3D G3DSA:3.40.630.30 9 167 1.3E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS24705 827a4c914b46c0826d81bee7d3fa3329 167 PANTHER PTHR13947 11 167 1.2E-61 T 22-04-2016 APECO1_RS24705 827a4c914b46c0826d81bee7d3fa3329 167 SUPERFAMILY SSF55729 8 167 5.66E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS24705 827a4c914b46c0826d81bee7d3fa3329 167 Pfam PF00583 Acetyltransferase (GNAT) family 66 145 9.1E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS05615 4ba528ac36c545fbdf3e46f82caabfda 319 Pfam PF03734 L,D-transpeptidase catalytic domain 102 239 1.9E-19 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APECO1_RS05615 4ba528ac36c545fbdf3e46f82caabfda 319 PANTHER PTHR30582 55 316 1.4E-216 T 22-04-2016 APECO1_RS05615 4ba528ac36c545fbdf3e46f82caabfda 319 PANTHER PTHR30582:SF9 55 316 1.4E-216 T 22-04-2016 APECO1_RS05615 4ba528ac36c545fbdf3e46f82caabfda 319 Gene3D G3DSA:3.10.350.10 52 90 1.2E-6 T 22-04-2016 IPR018392 LysM domain APECO1_RS05615 4ba528ac36c545fbdf3e46f82caabfda 319 Gene3D G3DSA:2.40.440.10 95 241 3.3E-34 T 22-04-2016 APECO1_RS05615 4ba528ac36c545fbdf3e46f82caabfda 319 SMART SM00257 44 90 2.9E-7 T 22-04-2016 IPR018392 LysM domain APECO1_RS05615 4ba528ac36c545fbdf3e46f82caabfda 319 Pfam PF01476 LysM domain 46 90 8.9E-7 T 22-04-2016 IPR018392 LysM domain APECO1_RS05615 4ba528ac36c545fbdf3e46f82caabfda 319 SUPERFAMILY SSF141523 100 239 3.14E-28 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 PANTHER PTHR32472 5 456 1.9E-228 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.9E-93 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.9E-93 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.9E-93 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.9E-93 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.9E-93 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.9E-93 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.9E-93 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 5.4E-240 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 Gene3D G3DSA:3.40.50.300 62 280 3.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 Pfam PF13481 AAA domain 88 225 4.6E-15 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.7E-9 T 22-04-2016 APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 SMART SM00382 94 248 3.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 SUPERFAMILY SSF54211 258 272 1.33E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 SUPERFAMILY SSF54211 306 457 1.33E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 SUPERFAMILY SSF52540 71 291 1.76E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25590 856a0abd3d7df46f2348dfd5e2ec41c5 460 Gene3D G3DSA:3.30.230.10 288 456 1.5E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Hamap MF_01588 DNA ligase [ligA]. 2 669 54.902 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Pfam PF12826 Helix-hairpin-helix motif 510 573 3.0E-22 T 22-04-2016 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SMART SM00532 3 448 8.3E-297 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SUPERFAMILY SSF50249 318 400 8.74E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 2.2E-278 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 PANTHER PTHR23389:SF9 1 531 1.1E-218 T 22-04-2016 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SUPERFAMILY SSF52113 596 669 5.23E-19 T 22-04-2016 IPR001357 BRCT domain APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Pfam PF14520 Helix-hairpin-helix domain 446 502 1.4E-5 T 22-04-2016 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 PIRSF PIRSF001604 1 671 4.8E-257 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Gene3D G3DSA:1.10.287.610 1 67 1.7E-30 T 22-04-2016 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SMART SM00278 446 465 24.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SMART SM00278 480 499 0.59 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SMART SM00278 512 531 600.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SMART SM00278 544 563 38.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Gene3D G3DSA:1.10.150.20 435 502 2.4E-28 T 22-04-2016 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 8.3E-36 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Gene3D G3DSA:1.10.150.20 504 584 3.4E-31 T 22-04-2016 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SUPERFAMILY SSF47781 403 583 2.63E-61 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 1.6E-142 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SMART SM00292 595 670 3.8E-14 T 22-04-2016 IPR001357 BRCT domain APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Gene3D G3DSA:3.30.470.30 119 252 8.2E-51 T 22-04-2016 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Gene3D G3DSA:3.40.50.10190 594 669 4.6E-26 T 22-04-2016 IPR001357 BRCT domain APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 3.9E-11 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 SUPERFAMILY SSF56091 2 316 3.17E-124 T 22-04-2016 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Gene3D G3DSA:2.40.50.140 319 391 1.1E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 PANTHER PTHR23389 1 531 1.1E-218 T 22-04-2016 APECO1_RS13580 eee9d13910c63b4b2865d2b752738c72 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 5.4E-14 T 22-04-2016 IPR001357 BRCT domain APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 PANTHER PTHR22912 4 64 4.6E-14 T 22-04-2016 APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 1.3E-6 T 22-04-2016 APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 393 408 1.3E-6 T 22-04-2016 APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 PANTHER PTHR22912:SF179 4 64 4.6E-14 T 22-04-2016 APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 Gene3D G3DSA:3.50.50.60 255 284 7.6E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 Gene3D G3DSA:3.50.50.60 351 435 7.6E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 Gene3D G3DSA:3.50.50.60 16 163 7.6E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 Pfam PF12831 FAD dependent oxidoreductase 19 446 3.3E-92 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 SUPERFAMILY SSF51905 17 181 5.75E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24930 e10afe8d914afbf26e4f8989eac91043 454 SUPERFAMILY SSF51905 370 424 5.75E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.4E-140 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 SMART SM01230 102 379 5.2E-152 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 SUPERFAMILY SSF55931 102 468 3.83E-139 T 22-04-2016 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 PANTHER PTHR20852:SF15 1 138 8.7E-280 T 22-04-2016 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 PANTHER PTHR20852:SF15 160 469 8.7E-280 T 22-04-2016 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 Gene3D G3DSA:3.30.590.10 106 455 1.4E-140 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 PANTHER PTHR20852 1 138 8.7E-280 T 22-04-2016 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 PANTHER PTHR20852 160 469 8.7E-280 T 22-04-2016 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 SUPERFAMILY SSF54368 3 99 3.01E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.8E-32 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 Gene3D G3DSA:3.10.20.70 3 105 5.0E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APECO1_RS22110 db66e6214ba9e9524ecbc161094c8675 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 6.1E-221 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APECO1_RS03345 0d674140e0371eefa4794c9905991698 254 PANTHER PTHR10992 1 254 6.2E-79 T 22-04-2016 APECO1_RS03345 0d674140e0371eefa4794c9905991698 254 Pfam PF12697 Alpha/beta hydrolase family 19 246 5.7E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS03345 0d674140e0371eefa4794c9905991698 254 PANTHER PTHR10992:SF768 1 254 6.2E-79 T 22-04-2016 APECO1_RS03345 0d674140e0371eefa4794c9905991698 254 Gene3D G3DSA:3.40.50.1820 4 253 9.8E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS03345 0d674140e0371eefa4794c9905991698 254 SUPERFAMILY SSF53474 15 253 4.12E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS03730 01aa66db5772e303e22577f946942238 753 SUPERFAMILY SSF52016 511 751 3.14E-34 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS03730 01aa66db5772e303e22577f946942238 753 Pfam PF00694 Aconitase C-terminal domain 636 683 4.1E-6 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PANTHER PTHR11670:SF30 616 753 1.1E-220 T 22-04-2016 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PANTHER PTHR11670:SF30 340 588 1.1E-220 T 22-04-2016 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PANTHER PTHR11670:SF30 36 318 1.1E-220 T 22-04-2016 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 Pfam PF00330 Aconitase family (aconitate hydratase) 41 470 7.7E-75 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 Gene3D G3DSA:3.30.499.10 29 185 7.5E-32 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 Gene3D G3DSA:3.30.499.10 301 314 6.9E-35 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 Gene3D G3DSA:3.30.499.10 348 531 6.9E-35 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PRINTS PR00415 Aconitase family signature 297 311 5.5E-6 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PRINTS PR00415 Aconitase family signature 140 153 5.5E-6 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PRINTS PR00415 Aconitase family signature 356 367 5.5E-6 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PRINTS PR00415 Aconitase family signature 413 426 5.5E-6 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PRINTS PR00415 Aconitase family signature 216 229 5.5E-6 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 Gene3D G3DSA:3.40.1060.10 187 292 1.6E-20 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PANTHER PTHR11670 616 753 1.1E-220 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PANTHER PTHR11670 340 588 1.1E-220 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 PANTHER PTHR11670 36 318 1.1E-220 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS03730 01aa66db5772e303e22577f946942238 753 Gene3D G3DSA:3.20.19.10 532 752 1.6E-47 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS03730 01aa66db5772e303e22577f946942238 753 SUPERFAMILY SSF53732 18 509 7.19E-115 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 Gene3D G3DSA:3.40.50.1360 82 229 4.3E-19 T 22-04-2016 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 PANTHER PTHR30363:SF21 1 257 5.1E-201 T 22-04-2016 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 3.2E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 SUPERFAMILY SSF46785 5 61 1.46E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 Gene3D G3DSA:1.10.10.10 5 63 2.5E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 SUPERFAMILY SSF100950 81 243 6.58E-34 T 22-04-2016 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 Pfam PF00455 DeoR C terminal sensor domain 83 236 3.2E-51 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.5E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.5E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 SMART SM00420 6 58 3.5E-18 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 PANTHER PTHR30363 1 257 5.1E-201 T 22-04-2016 APECO1_RS11710 d6d6f89097eee6fc8fd43d78b44dc784 257 SMART SM01134 78 238 1.3E-66 T 22-04-2016 APECO1_RS17320 ac8e05e5b5e0cb7c2c72c72eb779d4dd 390 PANTHER PTHR13693 43 385 7.6E-121 T 22-04-2016 APECO1_RS17320 ac8e05e5b5e0cb7c2c72c72eb779d4dd 390 Pfam PF00155 Aminotransferase class I and II 44 384 3.1E-55 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS17320 ac8e05e5b5e0cb7c2c72c72eb779d4dd 390 SUPERFAMILY SSF53383 8 386 5.92E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS17320 ac8e05e5b5e0cb7c2c72c72eb779d4dd 390 Gene3D G3DSA:3.40.640.10 64 276 5.4E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS17320 ac8e05e5b5e0cb7c2c72c72eb779d4dd 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APECO1_RS17320 ac8e05e5b5e0cb7c2c72c72eb779d4dd 390 Gene3D G3DSA:3.90.1150.10 277 386 2.6E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS08015 740de5ff3ac25382d0743572c0502c95 474 Pfam PF00171 Aldehyde dehydrogenase family 13 470 9.3E-166 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS08015 740de5ff3ac25382d0743572c0502c95 474 PANTHER PTHR11699 1 474 0.0 T 22-04-2016 APECO1_RS08015 740de5ff3ac25382d0743572c0502c95 474 Gene3D G3DSA:3.40.605.10 2 258 1.3E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS08015 740de5ff3ac25382d0743572c0502c95 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 0.0 T 22-04-2016 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APECO1_RS08015 740de5ff3ac25382d0743572c0502c95 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS08015 740de5ff3ac25382d0743572c0502c95 474 Gene3D G3DSA:3.40.309.10 259 437 2.0E-60 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS08015 740de5ff3ac25382d0743572c0502c95 474 PANTHER PTHR11699:SF109 1 474 0.0 T 22-04-2016 IPR015657 Aminobutyraldehyde dehydrogenase KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APECO1_RS08015 740de5ff3ac25382d0743572c0502c95 474 SUPERFAMILY SSF53720 2 473 5.89E-157 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS08015 740de5ff3ac25382d0743572c0502c95 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 88.492 T 22-04-2016 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.068 T 22-04-2016 IPR023931 Multidrug resistance protein MdtC APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 Gene3D G3DSA:3.30.70.1430 40 142 4.7E-30 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PANTHER PTHR32063:SF34 1 1021 0.0 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.8E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 4.8E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 4.8E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 4.8E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 4.8E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.8E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 4.8E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.8E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 4.8E-88 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82866 291 490 9.55E-49 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82693 555 650 3.53E-19 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 Gene3D G3DSA:3.30.2090.10 183 264 6.2E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 Gene3D G3DSA:3.30.2090.10 703 784 3.4E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 PANTHER PTHR32063 1 1021 0.0 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 Gene3D G3DSA:1.20.1640.10 285 500 8.0E-59 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82714 703 785 5.23E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 Gene3D G3DSA:1.10.3850.10 794 1010 8.1E-53 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 Gene3D G3DSA:3.30.70.1430 557 649 5.0E-14 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82866 813 1010 7.72E-43 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82714 183 266 5.1E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82693 788 833 6.1E-6 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82693 663 701 6.1E-6 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82693 136 182 5.49E-23 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82693 268 324 5.49E-23 T 22-04-2016 APECO1_RS11510 222214ff0fe5f81fdf9cfdb86af12c49 1025 SUPERFAMILY SSF82693 40 135 4.19E-23 T 22-04-2016 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 Pfam PF00672 HAMP domain 194 262 1.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 SUPERFAMILY SSF58104 235 522 4.45E-76 T 22-04-2016 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 SMART SM00319 44 180 1.4E-43 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 SUPERFAMILY SSF47170 39 178 1.23E-47 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 Gene3D G3DSA:1.20.120.30 36 179 1.6E-52 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 PANTHER PTHR32089:SF48 1 517 3.3E-267 T 22-04-2016 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 292 314 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 513 3.7E-68 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 PANTHER PTHR32089 1 517 3.3E-267 T 22-04-2016 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 SMART SM00304 214 266 1.5E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 Gene3D G3DSA:1.10.287.950 282 486 2.6E-64 T 22-04-2016 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 3.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 3.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 3.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 3.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 3.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 3.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 SMART SM00283 267 514 9.8E-95 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APECO1_RS10090 c642958a06a5576bd42f5e180ebbcecc 553 Pfam PF02203 Tar ligand binding domain homologue 1 169 8.9E-45 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.133 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.9E-183 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 Gene3D G3DSA:3.30.470.20 96 239 4.7E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 PIRSF PIRSF001554 1 388 6.3E-154 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 Pfam PF08442 ATP-grasp domain 2 203 5.4E-83 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 SUPERFAMILY SSF52210 239 385 9.81E-53 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 Gene3D G3DSA:3.30.1490.20 22 95 2.0E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 Pfam PF00549 CoA-ligase 262 382 2.1E-24 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 Gene3D G3DSA:3.40.50.261 240 383 3.4E-64 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 PANTHER PTHR11815 1 388 2.3E-234 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APECO1_RS03505 d3e359441fbb6d15ad5d4ade4c910750 388 SUPERFAMILY SSF56059 1 238 2.65E-81 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376 1177 1262 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376 961 1157 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376 1303 1395 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.8E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.439 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.4E-77 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 742 32.24 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.9E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 SUPERFAMILY SSF64484 1133 1363 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 7.1E-90 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Gene3D G3DSA:2.40.50.100 1156 1211 5.1E-6 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 SMART SM00663 235 514 1.1E-184 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376:SF32 1177 1262 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376:SF32 961 1157 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376:SF32 1303 1395 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.5E-27 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Gene3D G3DSA:2.40.40.20 417 489 2.8E-37 T 22-04-2016 APECO1_RS22750 7ddc16d3174f450041944c158e8d3968 1407 Gene3D G3DSA:2.40.40.20 349 376 2.8E-37 T 22-04-2016 APECO1_RS04060 9dbf9ce8120b14c0c53088d087bd7f43 127 Pfam PF10799 Biofilm formation protein (YliH/bssR) 1 126 1.0E-75 T 22-04-2016 IPR020359 Biofilm regulator BssR APECO1_RS04060 9dbf9ce8120b14c0c53088d087bd7f43 127 ProDom PD079626 YLIH RECEPTOR STY0893 CYTOPLASMIC 1 127 6.0E-61 T 22-04-2016 IPR020359 Biofilm regulator BssR APECO1_RS08970 4d2a96797065831cf58026432763a778 261 Gene3D G3DSA:1.20.950.20 62 258 1.1E-33 T 22-04-2016 APECO1_RS08970 4d2a96797065831cf58026432763a778 261 PANTHER PTHR30485 49 261 3.5E-82 T 22-04-2016 APECO1_RS08970 4d2a96797065831cf58026432763a778 261 SUPERFAMILY SSF81342 62 259 1.8E-23 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APECO1_RS08970 4d2a96797065831cf58026432763a778 261 PANTHER PTHR30485:SF1 49 261 3.5E-82 T 22-04-2016 APECO1_RS08970 4d2a96797065831cf58026432763a778 261 Pfam PF01292 Prokaryotic cytochrome b561 69 257 6.8E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 SUPERFAMILY SSF52540 1 240 1.2E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 SUPERFAMILY SSF55021 248 343 1.49E-26 T 22-04-2016 APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 Pfam PF00005 ABC transporter 21 169 5.6E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 SMART SM00382 30 218 2.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 SMART SM00930 265 340 9.8E-25 T 22-04-2016 IPR018449 NIL domain APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 PANTHER PTHR24220 3 316 1.1E-194 T 22-04-2016 APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 Gene3D G3DSA:3.30.70.260 238 343 5.7E-32 T 22-04-2016 APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 Gene3D G3DSA:3.40.50.300 1 237 1.1E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 3.4E-212 T 22-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 PANTHER PTHR24220:SF455 3 316 1.1E-194 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 APECO1_RS01050 f475495f01e3e555d3e1655f94c8fe13 343 Pfam PF09383 NIL domain 268 339 3.8E-20 T 22-04-2016 IPR018449 NIL domain APECO1_RS03665 d52c2ee5096867a0bfa1696dae4c3560 338 PANTHER PTHR10366 2 336 9.0E-152 T 22-04-2016 APECO1_RS03665 d52c2ee5096867a0bfa1696dae4c3560 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 5.7E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS03665 d52c2ee5096867a0bfa1696dae4c3560 338 PANTHER PTHR10366:SF39 2 336 9.0E-152 T 22-04-2016 APECO1_RS03665 d52c2ee5096867a0bfa1696dae4c3560 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.5E-150 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 APECO1_RS03665 d52c2ee5096867a0bfa1696dae4c3560 338 Gene3D G3DSA:3.40.50.720 1 179 2.7E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS03665 d52c2ee5096867a0bfa1696dae4c3560 338 Gene3D G3DSA:3.90.25.10 264 337 8.9E-51 T 22-04-2016 APECO1_RS03665 d52c2ee5096867a0bfa1696dae4c3560 338 Gene3D G3DSA:3.90.25.10 180 232 8.9E-51 T 22-04-2016 APECO1_RS03665 d52c2ee5096867a0bfa1696dae4c3560 338 SUPERFAMILY SSF51735 1 336 7.04E-102 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SUPERFAMILY SSF48008 93 233 3.66E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SMART SM00345 12 71 5.2E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Pfam PF07729 FCD domain 96 226 3.2E-22 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Gene3D G3DSA:1.20.120.530 91 235 1.1E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PANTHER PTHR11751:SF277 90 112 2.1E-43 T 22-04-2016 APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PANTHER PTHR11751:SF277 10 74 2.1E-43 T 22-04-2016 APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Gene3D G3DSA:1.10.10.10 2 74 8.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.6E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.6E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SMART SM00895 96 227 1.3E-20 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 SUPERFAMILY SSF46785 4 75 5.87E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PANTHER PTHR11751 90 112 2.1E-43 T 22-04-2016 APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 PANTHER PTHR11751 10 74 2.1E-43 T 22-04-2016 APECO1_RS17295 b6f37294ac79ad07ab6e5c38fd28e2a8 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 69 1.3E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 Gene3D G3DSA:2.40.128.130 1081 1376 8.5E-79 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 Pfam PF02395 Immunoglobulin A1 protease 54 802 7.0E-119 T 22-04-2016 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 SMART SM00869 1114 1365 3.8E-30 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 967 1376 5.6E-64 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 SUPERFAMILY SSF51126 744 1073 7.53E-36 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 SUPERFAMILY SSF103515 1095 1376 8.11E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 Pfam PF03797 Autotransporter beta-domain 1115 1362 1.9E-29 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 63 83 2.6E-17 T 22-04-2016 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 258 276 2.6E-17 T 22-04-2016 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 PRINTS PR00921 IgA-specific serine endopeptidase (S6) signature 642 664 2.6E-17 T 22-04-2016 IPR000710 Peptidase S6, IgA endopeptidase GO:0004252|GO:0006508 APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 Gene3D G3DSA:2.160.20.20 354 535 2.7E-93 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 Gene3D G3DSA:2.160.20.20 640 1046 2.7E-93 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 SUPERFAMILY SSF51126 394 521 4.71E-37 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS01475 84224e7424e7191cca90177d11000393 1376 SUPERFAMILY SSF51126 608 782 4.71E-37 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS18155 21705eb90727e6a028d0c9f35ebcd5de 158 PANTHER PTHR33799 1 158 2.9E-102 T 22-04-2016 APECO1_RS18155 21705eb90727e6a028d0c9f35ebcd5de 158 PANTHER PTHR33799:SF6 1 158 2.9E-102 T 22-04-2016 APECO1_RS18155 21705eb90727e6a028d0c9f35ebcd5de 158 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 155 1.1E-71 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 APECO1_RS18155 21705eb90727e6a028d0c9f35ebcd5de 158 Pfam PF03830 PTS system sorbose subfamily IIB component 6 153 2.2E-48 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS18155 21705eb90727e6a028d0c9f35ebcd5de 158 Gene3D G3DSA:3.40.35.10 5 156 2.8E-54 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS18155 21705eb90727e6a028d0c9f35ebcd5de 158 SUPERFAMILY SSF52728 5 156 2.35E-48 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS21545 aa3cea93b80b2669d0a7587ee31acb21 367 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.196 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 APECO1_RS21545 aa3cea93b80b2669d0a7587ee31acb21 367 Pfam PF00953 Glycosyl transferase family 4 76 232 3.3E-28 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS21545 aa3cea93b80b2669d0a7587ee31acb21 367 PANTHER PTHR22926:SF3 10 358 1.1E-116 T 22-04-2016 APECO1_RS21545 aa3cea93b80b2669d0a7587ee31acb21 367 PANTHER PTHR22926 10 358 1.1E-116 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS21545 aa3cea93b80b2669d0a7587ee31acb21 367 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 351 1.0E-173 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 APECO1_RS23045 dc2c874d2238d2b5ce4668687e9b483e 446 PANTHER PTHR38762 2 446 8.2E-206 T 22-04-2016 APECO1_RS23045 dc2c874d2238d2b5ce4668687e9b483e 446 Gene3D G3DSA:2.40.170.10 26 446 5.1E-175 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APECO1_RS23045 dc2c874d2238d2b5ce4668687e9b483e 446 SUPERFAMILY SSF56935 26 446 1.53E-153 T 22-04-2016 APECO1_RS23045 dc2c874d2238d2b5ce4668687e9b483e 446 Pfam PF02264 LamB porin 28 446 2.6E-145 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APECO1_RS23045 dc2c874d2238d2b5ce4668687e9b483e 446 Hamap MF_01301 Maltoporin [lamB]. 4 446 44.865 T 22-04-2016 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 APECO1_RS23045 dc2c874d2238d2b5ce4668687e9b483e 446 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 442 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 Pfam PF00288 GHMP kinases N terminal domain 115 181 3.2E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 Pfam PF08544 GHMP kinases C terminal 279 361 1.5E-13 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PIRSF PIRSF000530 1 382 3.5E-122 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 5.6E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 5.6E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 5.6E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 5.6E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PRINTS PR00473 Galactokinase signature 92 103 5.0E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PRINTS PR00473 Galactokinase signature 263 277 5.0E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PRINTS PR00473 Galactokinase signature 27 45 5.0E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PRINTS PR00473 Galactokinase signature 112 130 5.0E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 SUPERFAMILY SSF54211 3 202 1.67E-63 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PANTHER PTHR10457:SF6 2 381 1.9E-151 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 Gene3D G3DSA:3.30.230.10 5 207 1.4E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 382 1.1E-175 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 Pfam PF10509 Galactokinase galactose-binding signature 11 58 1.8E-21 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 Gene3D G3DSA:3.30.70.890 208 380 9.1E-62 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.747 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 SUPERFAMILY SSF55060 205 380 6.88E-52 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APECO1_RS03655 08809c12dd2da40190854488594c19e0 382 PANTHER PTHR10457 2 381 1.9E-151 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 SUPERFAMILY SSF46946 126 214 2.22E-17 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 1.0E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 SMART SM00898 2 110 1.3E-14 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 204 1.9E-10 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 SUPERFAMILY SSF81624 2 127 5.36E-27 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 SMART SM01232 126 221 5.4E-17 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 68.231 T 22-04-2016 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 Gene3D G3DSA:1.10.8.50 127 263 2.8E-32 T 22-04-2016 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 Gene3D G3DSA:3.20.190.10 2 105 1.1E-17 T 22-04-2016 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 PANTHER PTHR22993:SF14 1 262 6.3E-205 T 22-04-2016 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 PANTHER PTHR22993 1 262 6.3E-205 T 22-04-2016 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 SUPERFAMILY SSF57716 226 262 4.46E-11 T 22-04-2016 APECO1_RS03445 2fbdf73e9584f7aeca91d63ad9d5b46d 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 2.2E-11 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 SUPERFAMILY SSF51338 3 77 1.63E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 Pfam PF01979 Amidohydrolase family 264 374 6.0E-6 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 PANTHER PTHR11647 20 159 8.7E-47 T 22-04-2016 APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 SUPERFAMILY SSF51556 63 346 4.54E-72 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 PIRSF PIRSF001238 8 389 1.3E-158 T 22-04-2016 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 SUPERFAMILY SSF51338 346 388 8.64E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 Gene3D G3DSA:2.30.40.10 10 70 2.7E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 Gene3D G3DSA:3.20.20.140 71 342 3.2E-126 T 22-04-2016 APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 9 388 2.8E-188 T 22-04-2016 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 APECO1_RS24985 a6edf3c53b185a5a5d3fdf4531cc3cfb 390 PANTHER PTHR11647:SF72 20 159 8.7E-47 T 22-04-2016 APECO1_RS01185 f7a009ea866968bbd07dacc04d84c7a7 174 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 5 167 6.4E-42 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN APECO1_RS01185 f7a009ea866968bbd07dacc04d84c7a7 174 PANTHER PTHR37625 14 174 1.6E-46 T 22-04-2016 APECO1_RS01185 f7a009ea866968bbd07dacc04d84c7a7 174 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 14 164 1.2E-28 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN APECO1_RS01185 f7a009ea866968bbd07dacc04d84c7a7 174 PANTHER PTHR37625:SF3 14 174 1.6E-46 T 22-04-2016 APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 PANTHER PTHR19384 141 175 2.7E-115 T 22-04-2016 APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 PANTHER PTHR19384 1 120 2.7E-115 T 22-04-2016 APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 SUPERFAMILY SSF52218 5 170 1.96E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 PIRSF PIRSF038996 1 172 2.2E-71 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 Gene3D G3DSA:3.40.50.360 3 168 1.0E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 PANTHER PTHR19384:SF77 141 175 2.7E-115 T 22-04-2016 APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 PANTHER PTHR19384:SF77 1 120 2.7E-115 T 22-04-2016 APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 Pfam PF00258 Flavodoxin 6 160 2.8E-34 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APECO1_RS03335 0791e3a65ee6629fa7d1b8450305c4f7 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.6E-78 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APECO1_RS19400 37bc6b36a3c6a9ecadfa544006df132d 362 Pfam PF01761 3-dehydroquinate synthase 67 325 3.6E-109 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS19400 37bc6b36a3c6a9ecadfa544006df132d 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 8.1E-123 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS19400 37bc6b36a3c6a9ecadfa544006df132d 362 SUPERFAMILY SSF56796 4 356 1.31E-117 T 22-04-2016 APECO1_RS19400 37bc6b36a3c6a9ecadfa544006df132d 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.403 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS19400 37bc6b36a3c6a9ecadfa544006df132d 362 Gene3D G3DSA:1.20.1090.10 173 356 8.8E-68 T 22-04-2016 APECO1_RS19400 37bc6b36a3c6a9ecadfa544006df132d 362 PIRSF PIRSF001455 10 360 2.6E-106 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS19400 37bc6b36a3c6a9ecadfa544006df132d 362 Gene3D G3DSA:3.40.50.1970 2 172 2.0E-67 T 22-04-2016 APECO1_RS19400 37bc6b36a3c6a9ecadfa544006df132d 362 PANTHER PTHR21090 1 360 1.0E-212 T 22-04-2016 APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 226 3.6E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 PANTHER PTHR30251:SF6 1 236 2.1E-97 T 22-04-2016 APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 146 1.0E-36 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 PANTHER PTHR30251 1 236 2.1E-97 T 22-04-2016 APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 SUPERFAMILY SSF49584 152 240 1.96E-22 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 Gene3D G3DSA:2.60.40.360 28 147 6.5E-45 T 22-04-2016 IPR008962 PapD-like APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 SUPERFAMILY SSF49354 28 150 3.4E-41 T 22-04-2016 IPR008962 PapD-like APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 Gene3D G3DSA:2.60.40.1070 151 239 2.1E-27 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 105 122 2.9E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 128 143 2.9E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 75 96 2.9E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 164 179 2.9E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS16865 df21aeaa9b706a7b5c12d0bc5801835b 244 PRINTS PR00969 Pili chaperone signature 28 37 2.9E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 46.393 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 PANTHER PTHR10520:SF7 13 274 7.9E-140 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 Pfam PF01842 ACT domain 8 69 5.6E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 SUPERFAMILY SSF55021 6 67 4.0E-9 T 22-04-2016 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 SUPERFAMILY SSF53328 86 279 7.72E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 Gene3D G3DSA:3.30.70.260 6 71 4.2E-12 T 22-04-2016 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 PANTHER PTHR10520 13 274 7.9E-140 T 22-04-2016 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 Pfam PF00551 Formyl transferase 86 262 5.5E-56 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 PIRSF PIRSF036480 4 280 3.5E-114 T 22-04-2016 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 1.8E-133 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 Gene3D G3DSA:3.40.50.170 86 277 1.6E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 4.4E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 4.4E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 4.4E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 4.4E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 4.4E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APECO1_RS06525 efae6ff8a9c8dff1c576b841889e7482 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 4.4E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APECO1_RS02870 0cccaa9c15504ec98d7268f47fde96a5 334 PANTHER PTHR30472:SF31 6 334 7.3E-173 T 22-04-2016 APECO1_RS02870 0cccaa9c15504ec98d7268f47fde96a5 334 SUPERFAMILY SSF81345 9 328 1.83E-74 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS02870 0cccaa9c15504ec98d7268f47fde96a5 334 Gene3D G3DSA:1.10.3470.10 10 331 7.4E-97 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS02870 0cccaa9c15504ec98d7268f47fde96a5 334 Pfam PF01032 FecCD transport family 19 328 7.3E-90 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS02870 0cccaa9c15504ec98d7268f47fde96a5 334 PANTHER PTHR30472 6 334 7.3E-173 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 226 494 1.8E-98 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 Gene3D G3DSA:3.40.1190.20 236 493 2.8E-91 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 498 23.349 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 14 215 23.899 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 318 328 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 Gene3D G3DSA:3.40.50.10260 11 235 3.2E-70 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 Pfam PF01256 Carbohydrate kinase 253 491 4.2E-81 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 215 9.1E-73 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 PANTHER PTHR12592:SF0 1 502 6.7E-157 T 22-04-2016 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 Pfam PF03853 YjeF-related protein N-terminus 35 194 6.7E-44 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 PIRSF PIRSF017184 10 501 6.1E-178 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 433 443 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 SUPERFAMILY SSF53613 228 493 4.5E-75 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 SUPERFAMILY SSF64153 12 251 1.11E-64 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APECO1_RS24240 c84d30a236bb759ad39badb1d6b23dbc 510 PANTHER PTHR12592 1 502 6.7E-157 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 PANTHER PTHR11615:SF128 1 310 0.0 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 PANTHER PTHR11615:SF128 342 808 0.0 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 Gene3D G3DSA:2.40.40.20 663 808 5.9E-56 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 SUPERFAMILY SSF50692 678 808 1.81E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 10 808 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 Gene3D G3DSA:3.40.50.740 112 196 3.0E-81 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 Gene3D G3DSA:3.40.50.740 401 646 3.0E-81 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 SUPERFAMILY SSF53706 50 688 3.66E-173 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 Gene3D G3DSA:2.20.25.90 45 111 1.8E-16 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 SMART SM00926 49 108 4.9E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 Gene3D G3DSA:3.40.228.10 197 400 8.4E-82 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 Pfam PF00384 Molybdopterin oxidoreductase 111 566 9.5E-97 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 Pfam PF01568 Molydopterin dinucleotide binding domain 687 800 1.6E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 49 108 9.7E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 723 750 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 PANTHER PTHR11615 1 310 0.0 T 22-04-2016 APECO1_RS08525 993b07d30cc26fbedf91df2b46f892bc 808 PANTHER PTHR11615 342 808 0.0 T 22-04-2016 APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 Gene3D G3DSA:1.20.1250.20 24 230 6.0E-24 T 22-04-2016 APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 Gene3D G3DSA:1.20.1250.20 252 444 2.6E-28 T 22-04-2016 APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 SUPERFAMILY SSF103661 465 497 1.83E-12 T 22-04-2016 APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 PANTHER PTHR23508 1 462 7.2E-285 T 22-04-2016 APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 SUPERFAMILY SSF103473 24 446 2.22E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 Pfam PF00083 Sugar (and other) transporter 28 448 3.0E-76 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 432 2.5E-146 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 Pfam PF08946 Osmosensory transporter coiled coil 454 499 1.2E-22 T 22-04-2016 IPR015041 Osmosensory transporter coiled coil APECO1_RS23530 8843164f7a68b5ac565b8af077bc0bc8 500 PANTHER PTHR23508:SF17 1 462 7.2E-285 T 22-04-2016 APECO1_RS11205 e1b90d9cdd851d1aafe09ff98143aef9 452 Pfam PF13520 Amino acid permease 57 409 8.8E-35 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS11205 e1b90d9cdd851d1aafe09ff98143aef9 452 PIRSF PIRSF006060 2 445 1.8E-71 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS11205 e1b90d9cdd851d1aafe09ff98143aef9 452 PANTHER PTHR11785 7 450 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS11205 e1b90d9cdd851d1aafe09ff98143aef9 452 PANTHER PTHR11785:SF350 7 450 0.0 T 22-04-2016 APECO1_RS23015 821eb6bd7d0edeb58c9d5ec6e0f4b3dd 136 PANTHER PTHR37819 1 136 4.8E-51 T 22-04-2016 APECO1_RS23015 821eb6bd7d0edeb58c9d5ec6e0f4b3dd 136 Hamap MF_01048 Protein PsiE [psiE]. 3 136 25.404 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 APECO1_RS23015 821eb6bd7d0edeb58c9d5ec6e0f4b3dd 136 PIRSF PIRSF029598 1 136 2.7E-53 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 APECO1_RS23015 821eb6bd7d0edeb58c9d5ec6e0f4b3dd 136 Pfam PF06146 Phosphate-starvation-inducible E 63 123 1.6E-16 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like APECO1_RS23015 821eb6bd7d0edeb58c9d5ec6e0f4b3dd 136 PANTHER PTHR37819:SF1 1 136 4.8E-51 T 22-04-2016 APECO1_RS07325 01b386065c3f2d61e5463a7369bbc6c7 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 APECO1_RS07325 01b386065c3f2d61e5463a7369bbc6c7 168 Gene3D G3DSA:3.40.30.10 4 168 8.2E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS07325 01b386065c3f2d61e5463a7369bbc6c7 168 PANTHER PTHR10681:SF81 1 168 5.2E-54 T 22-04-2016 APECO1_RS07325 01b386065c3f2d61e5463a7369bbc6c7 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.965 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 APECO1_RS07325 01b386065c3f2d61e5463a7369bbc6c7 168 Pfam PF08534 Redoxin 20 163 3.9E-31 T 22-04-2016 IPR013740 Redoxin GO:0016491 APECO1_RS07325 01b386065c3f2d61e5463a7369bbc6c7 168 PANTHER PTHR10681 1 168 5.2E-54 T 22-04-2016 APECO1_RS07325 01b386065c3f2d61e5463a7369bbc6c7 168 SUPERFAMILY SSF52833 4 164 3.34E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS00545 a1a04eb2fdbbba6305378265f6c37d0e 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 32.961 T 22-04-2016 IPR009777 Cell division protein ZapD APECO1_RS00545 a1a04eb2fdbbba6305378265f6c37d0e 247 Gene3D G3DSA:1.10.3900.10 13 173 2.2E-67 T 22-04-2016 APECO1_RS00545 a1a04eb2fdbbba6305378265f6c37d0e 247 PANTHER PTHR39455:SF1 1 247 1.5E-124 T 22-04-2016 APECO1_RS00545 a1a04eb2fdbbba6305378265f6c37d0e 247 Gene3D G3DSA:2.60.440.10 174 247 2.6E-36 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain APECO1_RS00545 a1a04eb2fdbbba6305378265f6c37d0e 247 PANTHER PTHR39455 1 247 1.5E-124 T 22-04-2016 APECO1_RS00545 a1a04eb2fdbbba6305378265f6c37d0e 247 SUPERFAMILY SSF160950 4 247 4.97E-93 T 22-04-2016 APECO1_RS00545 a1a04eb2fdbbba6305378265f6c37d0e 247 Pfam PF07072 Protein of unknown function (DUF1342) 19 225 1.5E-78 T 22-04-2016 IPR009777 Cell division protein ZapD APECO1_RS02010 ce537c56f270bb26b65e0ce16c00c7b2 302 PANTHER PTHR18964 3 302 2.2E-104 T 22-04-2016 APECO1_RS02010 ce537c56f270bb26b65e0ce16c00c7b2 302 PANTHER PTHR18964:SF123 3 302 2.2E-104 T 22-04-2016 APECO1_RS02010 ce537c56f270bb26b65e0ce16c00c7b2 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family APECO1_RS02010 ce537c56f270bb26b65e0ce16c00c7b2 302 SUPERFAMILY SSF53067 3 300 1.09E-62 T 22-04-2016 APECO1_RS02010 ce537c56f270bb26b65e0ce16c00c7b2 302 Gene3D G3DSA:3.30.420.40 132 280 3.0E-49 T 22-04-2016 APECO1_RS02010 ce537c56f270bb26b65e0ce16c00c7b2 302 Gene3D G3DSA:3.30.420.40 2 131 2.6E-37 T 22-04-2016 APECO1_RS02010 ce537c56f270bb26b65e0ce16c00c7b2 302 Pfam PF00480 ROK family 3 301 5.9E-100 T 22-04-2016 IPR000600 ROK family APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 Gene3D G3DSA:2.170.130.10 30 147 5.8E-39 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 37 - T 22-04-2016 IPR010916 TonB box, conserved site APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 Gene3D G3DSA:2.40.170.20 148 660 5.9E-75 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 Pfam PF00593 TonB dependent receptor 413 658 1.5E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 660 1.8E-135 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 PANTHER PTHR32552 29 660 0.0 T 22-04-2016 APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 30 660 5.0E-177 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 PANTHER PTHR32552:SF22 29 660 0.0 T 22-04-2016 APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 SUPERFAMILY SSF56935 30 660 4.03E-102 T 22-04-2016 APECO1_RS20070 0fb6a51a14fd6a39ab05df07232cd0dc 660 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 147 2.7E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.634 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 Gene3D G3DSA:2.40.50.140 1 123 5.3E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.6E-70 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 PIRSF PIRSF002133 1 124 7.8E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 Pfam PF00164 Ribosomal protein S12/S23 6 123 1.8E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 PANTHER PTHR11652 1 116 3.2E-75 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19185 29495e0d2573e3eb61572cc610d4e48b 124 SUPERFAMILY SSF50249 3 123 1.63E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 SUPERFAMILY SSF46785 1 85 3.16E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.4E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 PANTHER PTHR30126 1 309 7.6E-228 T 22-04-2016 APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 PANTHER PTHR30126:SF6 1 309 7.6E-228 T 22-04-2016 APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:1.10.10.10 1 81 9.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 Pfam PF03466 LysR substrate binding domain 92 292 8.0E-43 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 SUPERFAMILY SSF53850 91 322 1.47E-46 T 22-04-2016 APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:3.40.190.10 185 261 6.9E-32 T 22-04-2016 APECO1_RS07055 14303662561815729cd506cb95d39cd6 324 Gene3D G3DSA:3.40.190.10 92 184 6.7E-21 T 22-04-2016 APECO1_RS20115 d2a66d40466d5cd7424eb1c172bed1e1 108 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 1 108 2.0E-59 T 22-04-2016 APECO1_RS20115 d2a66d40466d5cd7424eb1c172bed1e1 108 Pfam PF06411 HdeA/HdeB family 15 96 4.3E-24 T 22-04-2016 IPR010486 HNS-dependent expression A/B APECO1_RS20115 d2a66d40466d5cd7424eb1c172bed1e1 108 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 2 103 26.215 T 22-04-2016 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 APECO1_RS20115 d2a66d40466d5cd7424eb1c172bed1e1 108 Gene3D G3DSA:1.10.890.10 24 97 9.0E-9 T 22-04-2016 IPR010486 HNS-dependent expression A/B APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 SUPERFAMILY SSF51569 1 283 1.17E-95 T 22-04-2016 APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 PANTHER PTHR30304 1 284 5.2E-150 T 22-04-2016 APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 6.9E-96 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 PIRSF PIRSF001359 1 284 6.4E-108 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 1.9E-100 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 PANTHER PTHR30304:SF5 1 284 5.2E-150 T 22-04-2016 APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 Gene3D G3DSA:3.20.20.70 1 283 2.6E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS18730 d370397c492579cd65c665023b894ce6 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 5.5E-144 T 22-04-2016 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APECO1_RS24565 d91161524c84851656dd4ba68bcc7232 318 Pfam PF13407 Periplasmic binding protein domain 26 274 4.5E-44 T 22-04-2016 IPR025997 Periplasmic binding protein APECO1_RS24565 d91161524c84851656dd4ba68bcc7232 318 PANTHER PTHR32196:SF20 1 280 9.8E-162 T 22-04-2016 APECO1_RS24565 d91161524c84851656dd4ba68bcc7232 318 Gene3D G3DSA:3.40.50.2300 140 308 1.6E-44 T 22-04-2016 APECO1_RS24565 d91161524c84851656dd4ba68bcc7232 318 SUPERFAMILY SSF53822 23 310 3.2E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS24565 d91161524c84851656dd4ba68bcc7232 318 Gene3D G3DSA:3.40.50.2300 25 139 2.0E-28 T 22-04-2016 APECO1_RS24565 d91161524c84851656dd4ba68bcc7232 318 PANTHER PTHR32196 1 280 9.8E-162 T 22-04-2016 APECO1_RS07880 a95b5f407fb56443207eab462fd05879 266 PANTHER PTHR30336 54 265 9.2E-23 T 22-04-2016 APECO1_RS07880 a95b5f407fb56443207eab462fd05879 266 Gene3D G3DSA:3.40.50.620 31 180 4.4E-56 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS07880 a95b5f407fb56443207eab462fd05879 266 PANTHER PTHR30336:SF4 54 265 9.2E-23 T 22-04-2016 APECO1_RS07880 a95b5f407fb56443207eab462fd05879 266 Pfam PF02698 DUF218 domain 40 173 1.6E-15 T 22-04-2016 IPR003848 Domain of unknown function DUF218 APECO1_RS02920 4d8f03b5b84896e719b7b405266d546a 362 Gene3D G3DSA:3.40.50.1970 6 160 1.7E-34 T 22-04-2016 APECO1_RS02920 4d8f03b5b84896e719b7b405266d546a 362 Gene3D G3DSA:1.20.1090.10 162 359 2.7E-52 T 22-04-2016 APECO1_RS02920 4d8f03b5b84896e719b7b405266d546a 362 PANTHER PTHR11496:SF55 1 362 1.4E-190 T 22-04-2016 APECO1_RS02920 4d8f03b5b84896e719b7b405266d546a 362 PANTHER PTHR11496 1 362 1.4E-190 T 22-04-2016 APECO1_RS02920 4d8f03b5b84896e719b7b405266d546a 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS02920 4d8f03b5b84896e719b7b405266d546a 362 SUPERFAMILY SSF56796 9 357 5.1E-60 T 22-04-2016 APECO1_RS02920 4d8f03b5b84896e719b7b405266d546a 362 PIRSF PIRSF000112 2 362 3.2E-130 T 22-04-2016 APECO1_RS02920 4d8f03b5b84896e719b7b405266d546a 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 348 1.1E-47 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 SUPERFAMILY SSF54292 1 106 6.18E-30 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 2.9E-92 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 Gene3D G3DSA:3.10.20.30 1 106 1.6E-36 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 SUPERFAMILY SSF46548 107 236 9.07E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 PANTHER PTHR11921:SF29 4 236 1.4E-132 T 22-04-2016 APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 Gene3D G3DSA:1.10.1060.10 108 236 3.8E-46 T 22-04-2016 APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 1.0E-9 T 22-04-2016 APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 3.0E-31 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APECO1_RS03485 fd8c9643325bacc730ef2556804f8f2a 238 PANTHER PTHR11921 4 236 1.4E-132 T 22-04-2016 APECO1_RS25130 8ed73c627dfcd2b5f620ce04c6ef5433 763 Gene3D G3DSA:3.40.720.10 163 465 1.1E-23 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS25130 8ed73c627dfcd2b5f620ce04c6ef5433 763 PANTHER PTHR10342 152 490 1.3E-94 T 22-04-2016 APECO1_RS25130 8ed73c627dfcd2b5f620ce04c6ef5433 763 Pfam PF00884 Sulfatase 163 446 6.3E-22 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS25130 8ed73c627dfcd2b5f620ce04c6ef5433 763 PANTHER PTHR10342:SF236 152 490 1.3E-94 T 22-04-2016 APECO1_RS25130 8ed73c627dfcd2b5f620ce04c6ef5433 763 PANTHER PTHR10342 513 565 1.3E-94 T 22-04-2016 APECO1_RS25130 8ed73c627dfcd2b5f620ce04c6ef5433 763 Hamap MF_01070 Phosphoglycerol transferase I [mdoB]. 6 738 54.331 T 22-04-2016 IPR020881 Phosphoglycerol transferase I GO:0005886|GO:0008960|GO:0009250 KEGG: 00561+2.7.8.20|UniPathway: UPA00637 APECO1_RS25130 8ed73c627dfcd2b5f620ce04c6ef5433 763 PANTHER PTHR10342:SF236 513 565 1.3E-94 T 22-04-2016 APECO1_RS25130 8ed73c627dfcd2b5f620ce04c6ef5433 763 SUPERFAMILY SSF53649 161 469 1.05E-30 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 Gene3D G3DSA:3.30.300.30 432 533 4.4E-27 T 22-04-2016 APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 PANTHER PTHR24095:SF123 7 533 5.9E-288 T 22-04-2016 APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 520 4.1E-12 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 Gene3D G3DSA:2.30.38.10 360 430 1.2E-21 T 22-04-2016 APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 Pfam PF00501 AMP-binding enzyme 37 437 6.2E-76 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 Gene3D G3DSA:3.40.50.980 192 349 8.9E-33 T 22-04-2016 APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 Gene3D G3DSA:3.40.50.980 36 191 1.8E-26 T 22-04-2016 APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 SUPERFAMILY SSF56801 5 532 2.09E-125 T 22-04-2016 APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 527 6.1E-284 T 22-04-2016 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 APECO1_RS02890 3130e68c5275d07e7226311dc7aa4ce9 536 PANTHER PTHR24095 7 533 5.9E-288 T 22-04-2016 APECO1_RS00405 d6b87d23a1d192a2690634c446c138b9 363 PANTHER PTHR11835:SF35 1 361 2.6E-206 T 22-04-2016 APECO1_RS00405 d6b87d23a1d192a2690634c446c138b9 363 Gene3D G3DSA:3.40.718.10 1 357 1.2E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS00405 d6b87d23a1d192a2690634c446c138b9 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.751 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APECO1_RS00405 d6b87d23a1d192a2690634c446c138b9 363 SMART SM01329 6 355 3.8E-200 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS00405 d6b87d23a1d192a2690634c446c138b9 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 1.0E-172 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APECO1_RS00405 d6b87d23a1d192a2690634c446c138b9 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APECO1_RS00405 d6b87d23a1d192a2690634c446c138b9 363 SUPERFAMILY SSF53659 2 360 3.42E-122 T 22-04-2016 APECO1_RS00405 d6b87d23a1d192a2690634c446c138b9 363 PANTHER PTHR11835 1 361 2.6E-206 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APECO1_RS00405 d6b87d23a1d192a2690634c446c138b9 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.3E-139 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS04590 c959585f6260088ae6486013d5b0e215 172 PANTHER PTHR35861:SF2 1 172 1.8E-57 T 22-04-2016 APECO1_RS04590 c959585f6260088ae6486013d5b0e215 172 Pfam PF04985 Phage tail tube protein FII 4 171 7.5E-63 T 22-04-2016 IPR006498 Tail tube protein APECO1_RS04590 c959585f6260088ae6486013d5b0e215 172 PANTHER PTHR35861 1 172 1.8E-57 T 22-04-2016 APECO1_RS04590 c959585f6260088ae6486013d5b0e215 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 172 3.5E-50 T 22-04-2016 IPR006498 Tail tube protein APECO1_RS11590 c959585f6260088ae6486013d5b0e215 172 PANTHER PTHR35861:SF2 1 172 1.8E-57 T 22-04-2016 APECO1_RS11590 c959585f6260088ae6486013d5b0e215 172 Pfam PF04985 Phage tail tube protein FII 4 171 7.5E-63 T 22-04-2016 IPR006498 Tail tube protein APECO1_RS11590 c959585f6260088ae6486013d5b0e215 172 PANTHER PTHR35861 1 172 1.8E-57 T 22-04-2016 APECO1_RS11590 c959585f6260088ae6486013d5b0e215 172 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 172 3.5E-50 T 22-04-2016 IPR006498 Tail tube protein APECO1_RS02330 404cde5e95a462b9b1da2f5d4f625a3b 183 Gene3D G3DSA:2.160.10.10 2 183 1.6E-61 T 22-04-2016 APECO1_RS02330 404cde5e95a462b9b1da2f5d4f625a3b 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS02330 404cde5e95a462b9b1da2f5d4f625a3b 183 SMART SM01266 5 59 1.4E-19 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APECO1_RS02330 404cde5e95a462b9b1da2f5d4f625a3b 183 PANTHER PTHR23416:SF58 1 183 2.0E-97 T 22-04-2016 APECO1_RS02330 404cde5e95a462b9b1da2f5d4f625a3b 183 SUPERFAMILY SSF51161 2 182 1.23E-54 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS02330 404cde5e95a462b9b1da2f5d4f625a3b 183 PANTHER PTHR23416 1 183 2.0E-97 T 22-04-2016 APECO1_RS02330 404cde5e95a462b9b1da2f5d4f625a3b 183 Pfam PF12464 Maltose acetyltransferase 7 57 3.9E-15 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APECO1_RS02330 404cde5e95a462b9b1da2f5d4f625a3b 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 4.3E-11 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS02330 404cde5e95a462b9b1da2f5d4f625a3b 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 92 109 0.0041 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS14150 2f75a23ae03ae8ddb40c572437e83889 114 Pfam PF06356 Protein of unknown function (DUF1064) 49 92 4.2E-6 T 22-04-2016 IPR009414 Protein of unknown function DUF1064 APECO1_RS14150 2f75a23ae03ae8ddb40c572437e83889 114 Gene3D G3DSA:3.40.91.30 12 113 6.8E-30 T 22-04-2016 IPR011578 Restriction endonuclease, FokI, C-terminal/endonuclease I, core GO:0003677|GO:0004536 APECO1_RS16860 2da8d510bc8dc29cc81635ada30305ad 193 Pfam PF14855 Pilus-assembly fibrillin subunit, chaperone 4 193 2.6E-86 T 22-04-2016 IPR029224 Pilus-assembly complex, chaperone PapJ APECO1_RS16860 2da8d510bc8dc29cc81635ada30305ad 193 ProDom PD036408 PAPJ PRECURSOR CHAPERONE SIGNAL PERIPLASMIC PIXJ PRSJ PLASMID PRFJ PILUS 3 193 5.0E-101 T 22-04-2016 IPR029224 Pilus-assembly complex, chaperone PapJ APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 SMART SM00448 2 112 1.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 Gene3D G3DSA:2.20.25.10 214 239 3.2E-7 T 22-04-2016 APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 SMART SM00850 143 238 4.5E-27 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 Gene3D G3DSA:2.40.50.40 135 201 1.2E-10 T 22-04-2016 APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 Pfam PF04397 LytTr DNA-binding domain 144 237 1.6E-24 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 Gene3D G3DSA:3.40.50.2300 1 122 5.4E-32 T 22-04-2016 APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 PANTHER PTHR26402:SF524 2 117 4.9E-34 T 22-04-2016 APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 PANTHER PTHR26402 2 117 4.9E-34 T 22-04-2016 APECO1_RS11890 19ff1b5d6bf0dc49e6340de80d654268 239 SUPERFAMILY SSF52172 1 123 8.97E-32 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS11950 567d89169882b0531af54614b73938d3 192 PANTHER PTHR30353 1 189 1.2E-112 T 22-04-2016 IPR032818 DedA family APECO1_RS11950 567d89169882b0531af54614b73938d3 192 PANTHER PTHR30353:SF8 1 189 1.2E-112 T 22-04-2016 APECO1_RS11950 567d89169882b0531af54614b73938d3 192 Pfam PF09335 SNARE associated Golgi protein 23 143 2.0E-16 T 22-04-2016 IPR032816 SNARE associated Golgi protein APECO1_RS05050 67861b564a3e69b4918194342d604e8e 199 Pfam PF02613 Nitrate reductase delta subunit 49 169 1.1E-23 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS05050 67861b564a3e69b4918194342d604e8e 199 Hamap MF_01150 Chaperone protein TorD [torD]. 1 199 31.01 T 22-04-2016 IPR023069 Chaperone TorD APECO1_RS05050 67861b564a3e69b4918194342d604e8e 199 PANTHER PTHR34227 1 198 2.1E-108 T 22-04-2016 APECO1_RS05050 67861b564a3e69b4918194342d604e8e 199 SUPERFAMILY SSF89155 7 197 7.72E-43 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS05050 67861b564a3e69b4918194342d604e8e 199 Gene3D G3DSA:1.10.3480.10 4 195 7.5E-35 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS05050 67861b564a3e69b4918194342d604e8e 199 PANTHER PTHR34227:SF1 1 198 2.1E-108 T 22-04-2016 APECO1_RS05720 e19d06bf6e1064f565dddfea5ba76bfe 368 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 360 2.7E-160 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APECO1_RS05720 e19d06bf6e1064f565dddfea5ba76bfe 368 Gene3D G3DSA:3.40.50.620 3 211 6.6E-98 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS05720 e19d06bf6e1064f565dddfea5ba76bfe 368 Gene3D G3DSA:2.30.30.280 213 280 3.8E-35 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 APECO1_RS05720 e19d06bf6e1064f565dddfea5ba76bfe 368 PANTHER PTHR11933 3 365 1.9E-219 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APECO1_RS05720 e19d06bf6e1064f565dddfea5ba76bfe 368 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 361 40.919 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APECO1_RS05720 e19d06bf6e1064f565dddfea5ba76bfe 368 PANTHER PTHR11933:SF10 3 365 1.9E-219 T 22-04-2016 APECO1_RS05720 e19d06bf6e1064f565dddfea5ba76bfe 368 SUPERFAMILY SSF52402 5 295 8.16E-58 T 22-04-2016 APECO1_RS05720 e19d06bf6e1064f565dddfea5ba76bfe 368 Gene3D G3DSA:2.40.30.10 282 363 3.0E-33 T 22-04-2016 APECO1_RS05720 e19d06bf6e1064f565dddfea5ba76bfe 368 Pfam PF03054 tRNA methyl transferase 6 360 2.3E-144 T 22-04-2016 APECO1_RS02155 9d2b85052cd5354fb8f45d2e5fe171ee 196 SUPERFAMILY SSF52317 5 188 2.55E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS02155 9d2b85052cd5354fb8f45d2e5fe171ee 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 7.0E-67 T 22-04-2016 IPR006287 DJ-1 APECO1_RS02155 9d2b85052cd5354fb8f45d2e5fe171ee 196 PANTHER PTHR11019:SF4 1 194 2.9E-76 T 22-04-2016 APECO1_RS02155 9d2b85052cd5354fb8f45d2e5fe171ee 196 PANTHER PTHR11019 1 194 2.9E-76 T 22-04-2016 APECO1_RS02155 9d2b85052cd5354fb8f45d2e5fe171ee 196 Pfam PF01965 DJ-1/PfpI family 4 170 5.1E-48 T 22-04-2016 IPR002818 DJ-1/PfpI APECO1_RS02155 9d2b85052cd5354fb8f45d2e5fe171ee 196 Gene3D G3DSA:3.40.50.880 2 188 1.2E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS07925 b31cdb4f4bfd01c14a881a8c43cc3243 539 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 532 59.073 T 22-04-2016 IPR023724 Glucan biosynthesis, MdoD UniPathway: UPA00637 APECO1_RS07925 b31cdb4f4bfd01c14a881a8c43cc3243 539 Gene3D G3DSA:2.60.40.10 411 533 2.3E-32 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS07925 b31cdb4f4bfd01c14a881a8c43cc3243 539 PANTHER PTHR30504:SF3 1 539 0.0 T 22-04-2016 APECO1_RS07925 b31cdb4f4bfd01c14a881a8c43cc3243 539 SUPERFAMILY SSF74650 33 409 3.77E-146 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS07925 b31cdb4f4bfd01c14a881a8c43cc3243 539 PANTHER PTHR30504 1 539 0.0 T 22-04-2016 APECO1_RS07925 b31cdb4f4bfd01c14a881a8c43cc3243 539 PIRSF PIRSF006281 1 526 5.8E-205 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 APECO1_RS07925 b31cdb4f4bfd01c14a881a8c43cc3243 539 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 33 522 1.0E-180 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 APECO1_RS07925 b31cdb4f4bfd01c14a881a8c43cc3243 539 Gene3D G3DSA:2.70.98.10 32 410 8.6E-161 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APECO1_RS07925 b31cdb4f4bfd01c14a881a8c43cc3243 539 SUPERFAMILY SSF81296 411 525 1.82E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set APECO1_RS11640 017cde25f80d79353ed13ff6c966b77f 327 PANTHER PTHR32039:SF8 76 266 4.7E-47 T 22-04-2016 APECO1_RS11640 017cde25f80d79353ed13ff6c966b77f 327 SUPERFAMILY SSF102405 99 273 1.47E-21 T 22-04-2016 APECO1_RS11640 017cde25f80d79353ed13ff6c966b77f 327 Pfam PF02481 DNA recombination-mediator protein A 91 294 9.4E-61 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APECO1_RS11640 017cde25f80d79353ed13ff6c966b77f 327 PANTHER PTHR32039 76 266 4.7E-47 T 22-04-2016 APECO1_RS11640 017cde25f80d79353ed13ff6c966b77f 327 Gene3D G3DSA:3.40.50.450 131 272 1.1E-5 T 22-04-2016 APECO1_RS19955 7ce33d2989401203edf1e7f6794ef3ca 452 PANTHER PTHR37324:SF2 6 452 9.2E-245 T 22-04-2016 APECO1_RS19955 7ce33d2989401203edf1e7f6794ef3ca 452 PANTHER PTHR37324 6 452 9.2E-245 T 22-04-2016 APECO1_RS19955 7ce33d2989401203edf1e7f6794ef3ca 452 PIRSF PIRSF006304 8 451 1.9E-156 T 22-04-2016 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 APECO1_RS19955 7ce33d2989401203edf1e7f6794ef3ca 452 Pfam PF03611 PTS system sugar-specific permease component 14 397 1.3E-80 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APECO1_RS19815 6785a4986aef59e61672d2c1d892c1f9 248 PANTHER PTHR32502:SF8 1 248 2.1E-52 T 22-04-2016 APECO1_RS19815 6785a4986aef59e61672d2c1d892c1f9 248 Pfam PF03609 PTS system sorbose-specific iic component 4 234 3.6E-72 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS19815 6785a4986aef59e61672d2c1d892c1f9 248 PANTHER PTHR32502 1 248 2.1E-52 T 22-04-2016 APECO1_RS19070 4c31ca787dff2e8979a12d5731b91705 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 2.2E-92 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19070 4c31ca787dff2e8979a12d5731b91705 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site APECO1_RS19070 4c31ca787dff2e8979a12d5731b91705 209 Pfam PF00297 Ribosomal protein L3 27 182 1.0E-14 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19070 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:2.40.30.10 158 207 8.6E-9 T 22-04-2016 APECO1_RS19070 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:2.40.30.10 3 32 8.6E-9 T 22-04-2016 APECO1_RS19070 4c31ca787dff2e8979a12d5731b91705 209 Gene3D G3DSA:4.10.960.10 77 157 2.8E-35 T 22-04-2016 APECO1_RS19070 4c31ca787dff2e8979a12d5731b91705 209 PANTHER PTHR11229 1 208 8.0E-124 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19070 4c31ca787dff2e8979a12d5731b91705 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.756 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19070 4c31ca787dff2e8979a12d5731b91705 209 SUPERFAMILY SSF50447 1 208 8.65E-81 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS02350 b135585b341397024703bc0195d3f308 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 360 4.8E-14 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS02350 b135585b341397024703bc0195d3f308 397 PANTHER PTHR30158:SF4 1 375 2.2E-216 T 22-04-2016 APECO1_RS02350 b135585b341397024703bc0195d3f308 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 1.1E-86 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS02350 b135585b341397024703bc0195d3f308 397 SUPERFAMILY SSF111369 52 300 1.11E-89 T 22-04-2016 APECO1_RS02350 b135585b341397024703bc0195d3f308 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 293 1.8E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS02350 b135585b341397024703bc0195d3f308 397 Gene3D G3DSA:2.40.50.100 173 208 1.3E-25 T 22-04-2016 APECO1_RS02350 b135585b341397024703bc0195d3f308 397 Gene3D G3DSA:2.40.50.100 65 98 1.3E-25 T 22-04-2016 APECO1_RS02350 b135585b341397024703bc0195d3f308 397 PANTHER PTHR30158 1 375 2.2E-216 T 22-04-2016 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 53.506 T 22-04-2016 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 Pfam PF12833 Helix-turn-helix domain 194 271 1.2E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 PANTHER PTHR11019:SF86 1 278 3.5E-184 T 22-04-2016 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 Gene3D G3DSA:1.10.10.60 168 223 6.8E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 PANTHER PTHR11019 1 278 3.5E-184 T 22-04-2016 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 SUPERFAMILY SSF46689 223 272 5.38E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 SUPERFAMILY SSF46689 171 221 6.36E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 Gene3D G3DSA:1.10.10.60 224 272 1.2E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 Pfam PF02311 AraC-like ligand binding domain 16 154 6.1E-24 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 Gene3D G3DSA:2.60.120.10 1 77 7.6E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 SUPERFAMILY SSF51215 15 158 1.96E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 5.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 5.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS22285 726ade13ff9ae4da6f3a4257213cb1e9 278 SMART SM00342 187 270 2.4E-33 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS17810 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:1.10.10.10 9 91 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17810 26e5504bd56f44056070309eab3e0513 310 SUPERFAMILY SSF46785 9 115 1.36E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17810 26e5504bd56f44056070309eab3e0513 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.5E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS17810 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:3.40.190.10 97 180 1.1E-19 T 22-04-2016 APECO1_RS17810 26e5504bd56f44056070309eab3e0513 310 Gene3D G3DSA:3.40.190.10 181 265 1.5E-22 T 22-04-2016 APECO1_RS17810 26e5504bd56f44056070309eab3e0513 310 SUPERFAMILY SSF53850 94 299 7.24E-39 T 22-04-2016 APECO1_RS17810 26e5504bd56f44056070309eab3e0513 310 PANTHER PTHR30537:SF18 1 310 5.2E-208 T 22-04-2016 APECO1_RS17810 26e5504bd56f44056070309eab3e0513 310 Pfam PF03466 LysR substrate binding domain 93 296 5.7E-35 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS17810 26e5504bd56f44056070309eab3e0513 310 PANTHER PTHR30537 1 310 5.2E-208 T 22-04-2016 APECO1_RS03615 b032852390b34ce4d1e86e1f1542d2eb 347 SUPERFAMILY SSF142754 29 341 4.45E-107 T 22-04-2016 APECO1_RS03615 b032852390b34ce4d1e86e1f1542d2eb 347 PANTHER PTHR30573 1 346 7.2E-168 T 22-04-2016 APECO1_RS03615 b032852390b34ce4d1e86e1f1542d2eb 347 Pfam PF02445 Quinolinate synthetase A protein 31 340 5.3E-102 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APECO1_RS03615 b032852390b34ce4d1e86e1f1542d2eb 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 71.974 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APECO1_RS03615 b032852390b34ce4d1e86e1f1542d2eb 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 22 341 4.3E-128 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 PANTHER PTHR32071 1 444 6.5E-261 T 22-04-2016 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 Gene3D G3DSA:1.10.10.60 390 437 8.0E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 SMART SM00382 156 299 8.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 Gene3D G3DSA:1.10.8.60 309 385 7.7E-23 T 22-04-2016 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 Pfam PF00158 Sigma-54 interaction domain 136 302 1.6E-71 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 SMART SM00448 6 117 8.1E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 SUPERFAMILY SSF52540 136 380 2.66E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 SUPERFAMILY SSF52172 4 180 4.7E-43 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 Gene3D G3DSA:3.40.50.2300 3 126 1.3E-36 T 22-04-2016 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 SUPERFAMILY SSF46689 387 437 3.17E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 Gene3D G3DSA:3.40.50.300 134 307 8.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 Pfam PF00072 Response regulator receiver domain 9 117 7.7E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS14440 567b1be3fa7f86e0dcc9a4c355605a55 444 PANTHER PTHR32071:SF5 1 444 6.5E-261 T 22-04-2016 APECO1_RS22425 9135843224952ec54eb7b67e2e3ef120 176 SUPERFAMILY SSF56235 2 172 1.47E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS22425 9135843224952ec54eb7b67e2e3ef120 176 Gene3D G3DSA:3.60.20.10 2 172 4.4E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS22425 9135843224952ec54eb7b67e2e3ef120 176 PIRSF PIRSF039093 1 175 3.8E-88 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APECO1_RS22425 9135843224952ec54eb7b67e2e3ef120 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.149 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APECO1_RS22425 9135843224952ec54eb7b67e2e3ef120 176 PANTHER PTHR32194 2 175 4.5E-128 T 22-04-2016 APECO1_RS22425 9135843224952ec54eb7b67e2e3ef120 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 5.7E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APECO1_RS22425 9135843224952ec54eb7b67e2e3ef120 176 Pfam PF00227 Proteasome subunit 2 167 1.3E-23 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 APECO1_RS03765 6b386b2357dc0ef636633d38e67e89ac 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 4.3E-67 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS03765 6b386b2357dc0ef636633d38e67e89ac 225 PANTHER PTHR21343 5 223 1.2E-123 T 22-04-2016 APECO1_RS03765 6b386b2357dc0ef636633d38e67e89ac 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 216 30.284 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS03765 6b386b2357dc0ef636633d38e67e89ac 225 PIRSF PIRSF006755 1 225 1.3E-88 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS03765 6b386b2357dc0ef636633d38e67e89ac 225 Gene3D G3DSA:3.40.50.300 3 214 9.8E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03765 6b386b2357dc0ef636633d38e67e89ac 225 PANTHER PTHR21343:SF13 5 223 1.2E-123 T 22-04-2016 APECO1_RS03765 6b386b2357dc0ef636633d38e67e89ac 225 SUPERFAMILY SSF52540 4 211 6.76E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03765 6b386b2357dc0ef636633d38e67e89ac 225 Pfam PF13500 AAA domain 4 208 1.6E-39 T 22-04-2016 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 22-04-2016 IPR010916 TonB box, conserved site APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 Gene3D G3DSA:2.40.170.20 166 648 1.3E-101 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 648 2.2E-143 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 163 7.0E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 PANTHER PTHR30069 335 624 0.0 T 22-04-2016 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 PANTHER PTHR30069 8 279 0.0 T 22-04-2016 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 Pfam PF00593 TonB dependent receptor 466 636 3.8E-20 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 Gene3D G3DSA:2.170.130.10 50 165 3.0E-37 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 SUPERFAMILY SSF56935 34 647 1.47E-120 T 22-04-2016 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 PANTHER PTHR30069:SF5 335 624 0.0 T 22-04-2016 APECO1_RS02835 afd5c4888ce2415f1e7beb8b4bd409af 648 PANTHER PTHR30069:SF5 8 279 0.0 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 7.0E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 5.1E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Pfam PF00679 Elongation factor G C-terminus 611 696 6.7E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115:SF66 310 702 0.0 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115:SF66 3 184 0.0 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.30.70.240 610 696 3.0E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF50447 271 411 3.76E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.30.230.10 491 609 9.4E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 SMART SM00889 487 609 1.4E-72 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF54980 611 700 2.84E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.8E-68 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF52540 6 288 1.2E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.30.70.870 413 487 7.9E-39 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115 310 702 0.0 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115 3 184 0.0 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 SMART SM00838 611 698 3.9E-50 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Pfam PF03764 Elongation factor G, domain IV 486 609 1.9E-45 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:2.40.30.10 312 412 6.1E-38 T 22-04-2016 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 112.335 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Gene3D G3DSA:3.40.50.300 7 293 5.1E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 SUPERFAMILY SSF54211 486 610 9.1E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS19175 5ed92216217cffcadf103a2d101359d4 704 Pfam PF14492 Elongation Factor G, domain II 411 485 7.8E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS00730 374b1f4eeba58f701025f02b58f13fa0 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.199 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APECO1_RS00730 374b1f4eeba58f701025f02b58f13fa0 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 4.9E-131 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APECO1_RS00730 374b1f4eeba58f701025f02b58f13fa0 264 Gene3D G3DSA:3.20.20.60 1 264 5.7E-111 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS00730 374b1f4eeba58f701025f02b58f13fa0 264 PANTHER PTHR20881:SF3 1 263 1.0E-192 T 22-04-2016 APECO1_RS00730 374b1f4eeba58f701025f02b58f13fa0 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 258 5.5E-106 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APECO1_RS00730 374b1f4eeba58f701025f02b58f13fa0 264 PANTHER PTHR20881 1 263 1.0E-192 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APECO1_RS00730 374b1f4eeba58f701025f02b58f13fa0 264 SUPERFAMILY SSF51621 4 263 1.36E-104 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS00730 374b1f4eeba58f701025f02b58f13fa0 264 PIRSF PIRSF000388 1 264 6.8E-98 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 108 1.1E-14 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 PANTHER PTHR10909:SF305 1 380 5.5E-156 T 22-04-2016 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:2.40.110.10 123 217 3.4E-23 T 22-04-2016 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 PANTHER PTHR10909 1 380 5.5E-156 T 22-04-2016 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:1.10.540.10 1 110 7.2E-19 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 1.9E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 376 5.0E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Gene3D G3DSA:1.20.140.10 218 380 3.9E-51 T 22-04-2016 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 Hamap MF_01052 Crotonobetainyl-CoA dehydrogenase [caiA]. 1 380 91.978 T 22-04-2016 IPR023450 Crotonobetainyl-CoA dehydrogenase CaiA GO:0009437|GO:0016627|GO:0055114 UniPathway: UPA00117 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 SUPERFAMILY SSF56645 1 227 3.27E-52 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APECO1_RS00225 fa68e48e0f4f5f7e3a1b394e6ac0e47f 380 SUPERFAMILY SSF47203 226 379 1.93E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APECO1_RS05880 3b4e3aedc2650e4d7ed68a147f8b3ea5 146 SUPERFAMILY SSF103370 1 141 1.96E-56 T 22-04-2016 IPR008711 Recombinase NinB APECO1_RS05880 3b4e3aedc2650e4d7ed68a147f8b3ea5 146 Gene3D G3DSA:1.10.3790.10 1 145 3.3E-63 T 22-04-2016 IPR008711 Recombinase NinB APECO1_RS05880 3b4e3aedc2650e4d7ed68a147f8b3ea5 146 Pfam PF05772 NinB protein 3 128 4.5E-53 T 22-04-2016 IPR008711 Recombinase NinB APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.511 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 PANTHER PTHR10256 1 346 6.6E-167 T 22-04-2016 APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 SUPERFAMILY SSF55326 7 161 5.38E-41 T 22-04-2016 APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 Gene3D G3DSA:3.30.1330.10 29 162 4.1E-32 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 5.7E-19 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 1.5E-134 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 Gene3D G3DSA:3.90.650.10 176 344 1.6E-20 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 SUPERFAMILY SSF56042 164 340 7.78E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 344 2.3E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS09445 b7d15c2cf1280a2ac89f80c1e8faf7e3 347 PIRSF PIRSF036407 1 346 2.5E-117 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APECO1_RS13720 5915cd13f4b2c3580726bd3d7df30834 467 Pfam PF06277 Ethanolamine utilisation protein EutA 5 465 3.3E-178 T 22-04-2016 IPR009377 Ethanolamine utilisation EutA UniPathway: UPA00560 APECO1_RS13720 5915cd13f4b2c3580726bd3d7df30834 467 PIRSF PIRSF012293 2 467 1.9E-212 T 22-04-2016 IPR009377 Ethanolamine utilisation EutA UniPathway: UPA00560 APECO1_RS13720 5915cd13f4b2c3580726bd3d7df30834 467 Gene3D G3DSA:3.30.420.40 229 264 4.2E-6 T 22-04-2016 APECO1_RS13720 5915cd13f4b2c3580726bd3d7df30834 467 Gene3D G3DSA:3.30.420.40 148 178 4.2E-6 T 22-04-2016 APECO1_RS13720 5915cd13f4b2c3580726bd3d7df30834 467 SUPERFAMILY SSF53067 8 266 1.02E-8 T 22-04-2016 APECO1_RS01465 91aae56438274f6c10bc7de966b2d634 112 Pfam PF13356 Domain of unknown function (DUF4102) 3 88 4.5E-16 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 APECO1_RS01465 91aae56438274f6c10bc7de966b2d634 112 PANTHER PTHR30629 1 111 3.6E-38 T 22-04-2016 APECO1_RS01465 91aae56438274f6c10bc7de966b2d634 112 PANTHER PTHR30629:SF3 1 111 3.6E-38 T 22-04-2016 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 Pfam PF00089 Trypsin 50 244 3.6E-11 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 SUPERFAMILY SSF50494 113 270 1.31E-32 T 22-04-2016 IPR009003 Peptidase S1, PA clan APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 SUPERFAMILY SSF50494 32 85 1.31E-32 T 22-04-2016 IPR009003 Peptidase S1, PA clan APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 80 85 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 Gene3D G3DSA:2.40.10.10 177 246 6.5E-9 T 22-04-2016 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 PANTHER PTHR15462 2 261 1.4E-70 T 22-04-2016 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 217 228 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 Gene3D G3DSA:2.40.10.10 54 166 3.9E-12 T 22-04-2016 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 232 244 5.2E-23 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 178 191 5.2E-23 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 212 228 5.2E-23 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 69 86 5.2E-23 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APECO1_RS08585 fbc6abcb38fcafde30844a1d5dde7b4f 273 PRINTS PR00839 V8 serine protease family signature 44 61 5.2E-23 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 268 1.6E-30 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 SMART SM00062 47 269 1.1E-50 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 473 47.48 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 SUPERFAMILY SSF53850 40 268 4.01E-35 T 22-04-2016 APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 PANTHER PTHR21666 274 497 8.1E-151 T 22-04-2016 APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 Gene3D G3DSA:1.10.530.10 288 462 2.0E-35 T 22-04-2016 APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 PANTHER PTHR21666:SF215 274 497 8.1E-151 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 310 338 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 SUPERFAMILY SSF53955 245 398 9.01E-34 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 SUPERFAMILY SSF53955 433 441 9.01E-34 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 Pfam PF01464 Transglycosylase SLT domain 297 402 3.2E-22 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 Gene3D G3DSA:3.40.190.10 41 129 6.7E-16 T 22-04-2016 APECO1_RS14460 03d8e65717ec8e662f7c435fe057b990 518 Gene3D G3DSA:3.40.190.10 227 267 6.7E-16 T 22-04-2016 APECO1_RS05425 6450356cbbec0ae2e20afcac02c50fb1 231 PANTHER PTHR30435:SF15 17 216 2.0E-68 T 22-04-2016 APECO1_RS05425 6450356cbbec0ae2e20afcac02c50fb1 231 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 79 7.3E-25 T 22-04-2016 IPR005648 Flagellar hook capping protein APECO1_RS05425 6450356cbbec0ae2e20afcac02c50fb1 231 Pfam PF13860 FlgD Ig-like domain 119 189 2.0E-23 T 22-04-2016 IPR025965 FlgD Ig-like domain APECO1_RS05425 6450356cbbec0ae2e20afcac02c50fb1 231 PANTHER PTHR30435 17 216 2.0E-68 T 22-04-2016 APECO1_RS05425 6450356cbbec0ae2e20afcac02c50fb1 231 Pfam PF13861 FlgD Tudor-like domain 87 228 2.2E-16 T 22-04-2016 IPR025963 FlgD Tudor-like domain APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 Gene3D G3DSA:3.40.50.450 125 452 2.1E-124 T 22-04-2016 APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 PANTHER PTHR31223 83 342 4.0E-197 T 22-04-2016 APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 PANTHER PTHR31223 359 384 4.0E-197 T 22-04-2016 APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 4.5E-46 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 Pfam PF03641 Possible lysine decarboxylase 190 329 1.5E-33 T 22-04-2016 IPR031100 LOG family APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 2.3E-55 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 PANTHER PTHR31223:SF12 83 342 4.0E-197 T 22-04-2016 APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 PANTHER PTHR31223:SF12 359 384 4.0E-197 T 22-04-2016 APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 Gene3D G3DSA:3.30.1850.10 2 113 7.5E-54 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 APECO1_RS15855 b149efe21b9aa1e715c4f7a2b8051d58 454 SUPERFAMILY SSF102405 118 330 6.56E-42 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 PANTHER PTHR11615:SF167 1 300 0.0 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 PANTHER PTHR11615:SF167 332 798 0.0 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 SUPERFAMILY SSF50692 623 798 3.84E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 Gene3D G3DSA:3.40.228.10 187 390 7.9E-82 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 Pfam PF01568 Molydopterin dinucleotide binding domain 677 790 7.8E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 Pfam PF00384 Molybdopterin oxidoreductase 105 556 1.1E-87 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 5 798 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 Gene3D G3DSA:2.40.40.20 654 798 2.3E-53 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 SUPERFAMILY SSF53706 44 679 5.37E-171 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 Gene3D G3DSA:2.20.25.90 41 106 3.9E-16 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 Gene3D G3DSA:3.40.50.740 107 186 3.0E-86 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 Gene3D G3DSA:3.40.50.740 391 636 3.0E-86 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 67 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 SMART SM00926 43 102 3.1E-9 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 PANTHER PTHR11615 1 300 0.0 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 PANTHER PTHR11615 332 798 0.0 T 22-04-2016 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 102 1.5E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS08530 4299c2efbd14b8027ff7fc01572f422b 798 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 713 740 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS11180 98209c5c075015f3cf629be65c200818 157 PANTHER PTHR40055 1 157 1.6E-122 T 22-04-2016 APECO1_RS11180 98209c5c075015f3cf629be65c200818 157 Pfam PF06445 GyrI-like small molecule binding domain 1 152 1.7E-29 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain APECO1_RS11180 98209c5c075015f3cf629be65c200818 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 155 39.519 T 22-04-2016 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 APECO1_RS11180 98209c5c075015f3cf629be65c200818 157 Gene3D G3DSA:3.20.80.10 1 155 7.0E-55 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APECO1_RS11180 98209c5c075015f3cf629be65c200818 157 SUPERFAMILY SSF55136 1 155 1.57E-44 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APECO1_RS11180 98209c5c075015f3cf629be65c200818 157 PANTHER PTHR40055:SF2 1 157 1.6E-122 T 22-04-2016 APECO1_RS11180 98209c5c075015f3cf629be65c200818 157 SMART SM00871 1 153 2.9E-33 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding APECO1_RS20025 4fd745f0dc188e641c0c773f654c14a1 680 PANTHER PTHR11804 3 678 0.0 T 22-04-2016 APECO1_RS20025 4fd745f0dc188e641c0c773f654c14a1 680 Gene3D G3DSA:1.20.1050.40 7 138 6.0E-25 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APECO1_RS20025 4fd745f0dc188e641c0c773f654c14a1 680 PANTHER PTHR11804:SF8 3 678 0.0 T 22-04-2016 APECO1_RS20025 4fd745f0dc188e641c0c773f654c14a1 680 Pfam PF01432 Peptidase family M3 222 677 3.2E-177 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APECO1_RS20025 4fd745f0dc188e641c0c773f654c14a1 680 Gene3D G3DSA:1.10.1370.10 505 678 1.9E-147 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APECO1_RS20025 4fd745f0dc188e641c0c773f654c14a1 680 Gene3D G3DSA:1.10.1370.10 140 349 1.9E-147 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APECO1_RS20025 4fd745f0dc188e641c0c773f654c14a1 680 SUPERFAMILY SSF55486 1 677 5.37E-215 T 22-04-2016 APECO1_RS20025 4fd745f0dc188e641c0c773f654c14a1 680 Gene3D G3DSA:3.40.390.10 360 504 1.7E-61 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 Pfam PF00158 Sigma-54 interaction domain 381 548 2.6E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 Gene3D G3DSA:3.30.450.40 182 353 1.3E-23 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 Gene3D G3DSA:3.30.450.40 12 166 6.1E-9 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 SUPERFAMILY SSF55781 184 360 2.4E-21 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 SMART SM00382 401 545 8.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 PANTHER PTHR32071:SF16 322 692 2.5E-158 T 22-04-2016 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 SUPERFAMILY SSF46689 593 687 8.51E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 Gene3D G3DSA:1.10.10.60 607 687 2.6E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 Pfam PF02954 Bacterial regulatory protein, Fis family 645 684 1.6E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 SUPERFAMILY SSF52540 380 618 1.69E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 PANTHER PTHR32071 322 692 2.5E-158 T 22-04-2016 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 Gene3D G3DSA:3.40.50.300 377 553 1.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 603 620 1.9E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 667 687 1.9E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 SMART SM00065 202 354 2.1E-25 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 SMART SM00065 26 174 2.7E-13 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 SUPERFAMILY SSF55781 26 168 6.98E-11 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 Pfam PF01590 GAF domain 202 344 1.5E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS15535 1c6c64057e16840dca9c804d648253ee 692 Gene3D G3DSA:1.10.8.60 554 606 7.6E-23 T 22-04-2016 APECO1_RS13010 1bd30368f210cbeefcd2a69dbb8b491a 251 Pfam PF04333 MlaA lipoprotein 29 222 6.1E-67 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APECO1_RS13010 1bd30368f210cbeefcd2a69dbb8b491a 251 PRINTS PR01805 VacJ lipoprotein signature 48 64 4.9E-35 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APECO1_RS13010 1bd30368f210cbeefcd2a69dbb8b491a 251 PRINTS PR01805 VacJ lipoprotein signature 99 116 4.9E-35 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APECO1_RS13010 1bd30368f210cbeefcd2a69dbb8b491a 251 PRINTS PR01805 VacJ lipoprotein signature 138 155 4.9E-35 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APECO1_RS13010 1bd30368f210cbeefcd2a69dbb8b491a 251 PRINTS PR01805 VacJ lipoprotein signature 30 43 4.9E-35 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APECO1_RS13010 1bd30368f210cbeefcd2a69dbb8b491a 251 PANTHER PTHR30035:SF3 1 250 6.5E-127 T 22-04-2016 APECO1_RS13010 1bd30368f210cbeefcd2a69dbb8b491a 251 PANTHER PTHR30035 1 250 6.5E-127 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 PANTHER PTHR33799:SF3 3 323 7.1E-241 T 22-04-2016 APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 Gene3D G3DSA:3.40.50.510 3 133 1.5E-49 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 SUPERFAMILY SSF53062 3 128 1.09E-37 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 311 1.1E-56 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 Gene3D G3DSA:3.40.35.10 162 321 1.1E-67 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 3.7E-52 T 22-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 PANTHER PTHR33799 3 323 7.1E-241 T 22-04-2016 APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 Pfam PF03610 PTS system fructose IIA component 5 116 1.9E-35 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 Pfam PF03830 PTS system sorbose subfamily IIB component 164 310 1.4E-55 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS09720 9acde47746c6f3df5860b2f1d0bf5834 323 SUPERFAMILY SSF52728 162 321 9.16E-55 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 SUPERFAMILY SSF55920 178 436 5.63E-89 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 Gene3D G3DSA:3.90.230.10 182 437 2.9E-90 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 PANTHER PTHR10804 4 436 5.1E-167 T 22-04-2016 APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 SMART SM01011 4 139 1.0E-59 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 SUPERFAMILY SSF53092 4 177 2.14E-54 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 351 363 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 129 1.0E-36 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 PRINTS PR00599 Methionine aminopeptidase-1 signature 256 272 1.1E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 PRINTS PR00599 Methionine aminopeptidase-1 signature 373 385 1.1E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 PANTHER PTHR10804:SF17 4 436 5.1E-167 T 22-04-2016 APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 Pfam PF00557 Metallopeptidase family M24 185 414 7.4E-66 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS16495 8eb30970ca5f653eae3b5dc640de61dd 441 Gene3D G3DSA:3.40.350.10 4 181 4.5E-56 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 SMART SM00382 337 506 2.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 SMART SM00382 26 223 1.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 PANTHER PTHR19211 1 554 0.0 T 22-04-2016 APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 PANTHER PTHR19211:SF49 1 554 0.0 T 22-04-2016 APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 SUPERFAMILY SSF52540 119 253 1.25E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 SUPERFAMILY SSF52540 2 81 1.25E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 Pfam PF12848 ABC transporter 217 296 1.1E-28 T 22-04-2016 IPR032781 ABC-transporter extension domain APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 Gene3D G3DSA:3.40.50.300 310 538 3.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 Gene3D G3DSA:3.40.50.300 1 265 1.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 Pfam PF00005 ABC transporter 17 178 3.2E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 Pfam PF00005 ABC transporter 328 459 2.5E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19240 99a7f9d3f518b3db9caaea1f341e401c 637 SUPERFAMILY SSF52540 295 516 2.63E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15825 e70e73fb20a9dc3955bbbff30750b2e5 149 Pfam PF00258 Flavodoxin 6 140 2.4E-24 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APECO1_RS15825 e70e73fb20a9dc3955bbbff30750b2e5 149 PANTHER PTHR19384 1 144 7.3E-27 T 22-04-2016 APECO1_RS15825 e70e73fb20a9dc3955bbbff30750b2e5 149 SUPERFAMILY SSF52218 1 148 2.9E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15825 e70e73fb20a9dc3955bbbff30750b2e5 149 Gene3D G3DSA:3.40.50.360 1 148 1.8E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15825 e70e73fb20a9dc3955bbbff30750b2e5 149 PRINTS PR00369 Flavodoxin signature 84 94 2.2E-6 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APECO1_RS15825 e70e73fb20a9dc3955bbbff30750b2e5 149 PRINTS PR00369 Flavodoxin signature 108 127 2.2E-6 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APECO1_RS15825 e70e73fb20a9dc3955bbbff30750b2e5 149 PRINTS PR00369 Flavodoxin signature 53 64 2.2E-6 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APECO1_RS15910 ae85cbd559579e379252b6626689bebc 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 87.008 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 APECO1_RS15910 ae85cbd559579e379252b6626689bebc 366 PANTHER PTHR37524 1 360 1.9E-235 T 22-04-2016 APECO1_RS15910 ae85cbd559579e379252b6626689bebc 366 SUPERFAMILY SSF53335 184 296 6.24E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS15910 ae85cbd559579e379252b6626689bebc 366 Pfam PF01728 FtsJ-like methyltransferase 186 265 6.5E-8 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APECO1_RS15910 ae85cbd559579e379252b6626689bebc 366 PANTHER PTHR37524:SF2 1 360 1.9E-235 T 22-04-2016 APECO1_RS15910 ae85cbd559579e379252b6626689bebc 366 Gene3D G3DSA:3.40.50.150 184 316 1.3E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS15910 ae85cbd559579e379252b6626689bebc 366 PIRSF PIRSF028774 1 360 1.1E-191 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 APECO1_RS19950 ebb83c474031f34d381da3c9af661c6d 93 PANTHER PTHR33843:SF3 1 93 1.8E-35 T 22-04-2016 APECO1_RS19950 ebb83c474031f34d381da3c9af661c6d 93 PANTHER PTHR33843 1 93 1.8E-35 T 22-04-2016 APECO1_RS19950 ebb83c474031f34d381da3c9af661c6d 93 SUPERFAMILY SSF52794 4 91 4.03E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS19950 ebb83c474031f34d381da3c9af661c6d 93 Gene3D G3DSA:3.40.50.270 4 93 3.2E-28 T 22-04-2016 APECO1_RS19950 ebb83c474031f34d381da3c9af661c6d 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 83 9.0E-11 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PANTHER PTHR32063:SF25 1 1033 0.0 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82693 566 670 2.93E-32 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82693 38 132 3.77E-28 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.8E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.8E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 1.8E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.8E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.8E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.8E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.8E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.8E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.8E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82866 296 497 1.11E-47 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82693 136 182 3.14E-29 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82693 274 330 3.14E-29 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:3.30.2090.10 181 275 5.7E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:1.10.3850.10 816 1030 2.3E-56 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:1.10.3850.10 278 498 8.2E-60 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:3.30.2090.10 725 811 3.7E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:3.30.70.1430 568 670 4.3E-40 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 Gene3D G3DSA:3.30.70.1430 38 139 8.5E-37 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82714 182 271 4.45E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82866 808 1031 1.57E-44 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 SUPERFAMILY SSF82714 725 810 1.18E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 PANTHER PTHR32063 1 1033 0.0 T 22-04-2016 APECO1_RS18790 8a3de571fec32cea36413c1a6605251e 1034 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APECO1_RS10600 09c600f73f6d6ed45d31fc748aeedfab 112 Pfam PF05521 Phage head-tail joining protein 7 106 7.0E-19 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor APECO1_RS10600 09c600f73f6d6ed45d31fc748aeedfab 112 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 8 107 1.0E-11 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor APECO1_RS08030 8de8badeaf39e2e16977a0c02fb92745 77 Pfam PF10735 Protein of unknown function (DUF2526) 1 77 5.5E-44 T 22-04-2016 IPR019671 Protein of unknown function DUF2526 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 Pfam PF00691 OmpA family 222 317 2.9E-23 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PANTHER PTHR30128 1 346 3.5E-138 T 22-04-2016 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01021 OMPA domain signature 270 286 4.9E-24 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01021 OMPA domain signature 223 245 4.9E-24 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01021 OMPA domain signature 255 270 4.9E-24 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 Pfam PF01389 OmpA-like transmembrane domain 23 195 1.1E-75 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 ProSitePatterns PS01068 OmpA-like domain. 257 301 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 Gene3D G3DSA:3.30.1330.60 212 334 1.5E-42 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 SUPERFAMILY SSF103088 211 334 1.23E-36 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 SUPERFAMILY SSF56925 22 195 7.85E-47 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 Gene3D G3DSA:2.40.160.20 11 211 2.6E-80 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PANTHER PTHR30128:SF16 1 346 3.5E-138 T 22-04-2016 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01022 Outer membrane protein A signature 211 226 1.6E-72 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01022 Outer membrane protein A signature 313 326 1.6E-72 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01022 Outer membrane protein A signature 179 193 1.6E-72 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01022 Outer membrane protein A signature 165 179 1.6E-72 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01022 Outer membrane protein A signature 240 259 1.6E-72 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01022 Outer membrane protein A signature 107 123 1.6E-72 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APECO1_RS04865 6a523065351d99772b15e88f87eece2b 346 PRINTS PR01022 Outer membrane protein A signature 279 298 1.6E-72 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APECO1_RS01615 658a485de62cf10efd46b0c7e2f98ba7 239 Pfam PF02754 Cysteine-rich domain 133 216 3.1E-14 T 22-04-2016 IPR004017 Cysteine-rich domain APECO1_RS01615 658a485de62cf10efd46b0c7e2f98ba7 239 Pfam PF02754 Cysteine-rich domain 3 84 2.8E-13 T 22-04-2016 IPR004017 Cysteine-rich domain APECO1_RS01615 658a485de62cf10efd46b0c7e2f98ba7 239 PANTHER PTHR30296:SF0 2 239 5.9E-126 T 22-04-2016 APECO1_RS01615 658a485de62cf10efd46b0c7e2f98ba7 239 PANTHER PTHR30296 2 239 5.9E-126 T 22-04-2016 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 SMART SM00871 126 283 6.2E-10 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.1E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.1E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 Gene3D G3DSA:3.20.80.10 127 284 1.6E-42 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 Pfam PF06445 GyrI-like small molecule binding domain 127 283 1.9E-11 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 Gene3D G3DSA:1.10.10.60 3 57 9.1E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 Pfam PF12833 Helix-turn-helix domain 27 106 2.6E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 Gene3D G3DSA:1.10.10.60 58 119 4.2E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 SUPERFAMILY SSF55136 127 283 6.1E-36 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 PANTHER PTHR11019:SF56 3 112 4.1E-41 T 22-04-2016 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 PANTHER PTHR11019 3 112 4.1E-41 T 22-04-2016 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 SUPERFAMILY SSF46689 57 110 6.72E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 SMART SM00342 21 104 9.6E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS01585 c2bee4ef4a4c613305392569233f9fa6 285 SUPERFAMILY SSF46689 5 55 5.27E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS11885 354ab63b41dba23df9aec162e9e69519 156 PANTHER PTHR37805 1 156 7.1E-88 T 22-04-2016 APECO1_RS11885 354ab63b41dba23df9aec162e9e69519 156 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 2.2E-25 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 APECO1_RS11885 354ab63b41dba23df9aec162e9e69519 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 150 1.1E-20 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 APECO1_RS11885 354ab63b41dba23df9aec162e9e69519 156 PANTHER PTHR37805:SF1 1 156 7.1E-88 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 PANTHER PTHR32282 672 751 3.5E-294 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 PANTHER PTHR32282 2 310 3.5E-294 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:3.40.710.10 673 831 9.9E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:3.40.710.10 422 611 9.9E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:3.40.710.10 232 313 9.9E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 611 2.3E-24 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:2.40.50.140 347 421 1.2E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF53955 43 256 1.69E-80 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 PANTHER PTHR32282 421 612 3.5E-294 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 PANTHER PTHR32282 767 839 3.5E-294 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 PANTHER PTHR32282:SF5 672 751 3.5E-294 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 PANTHER PTHR32282:SF5 2 310 3.5E-294 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 758 1.1E-173 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 Gene3D G3DSA:1.10.3810.10 55 231 7.5E-76 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 1.7E-31 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 PANTHER PTHR32282:SF5 421 612 3.5E-294 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 PANTHER PTHR32282:SF5 767 839 3.5E-294 T 22-04-2016 APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 422 610 4.3E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 211 233 4.3E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 672 832 4.3E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 SUPERFAMILY SSF56601 262 313 4.3E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS19435 d6d3bb4d3342c2656c491338bb1c4e7f 850 Pfam PF00912 Transglycosylase 55 229 5.6E-65 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APECO1_RS13960 91fd40ce481e594866d5b6a1c201bc95 165 Pfam PF10721 Protein of unknown function (DUF2514) 10 159 1.3E-26 T 22-04-2016 IPR019659 Protein of unknown function DUF2514 APECO1_RS06655 0f98ed71b4e7fc4aa7556ef54760b7be 376 Gene3D G3DSA:3.30.160.60 1 68 4.2E-22 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APECO1_RS06655 0f98ed71b4e7fc4aa7556ef54760b7be 376 SUPERFAMILY SSF56349 97 374 3.53E-46 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS06655 0f98ed71b4e7fc4aa7556ef54760b7be 376 Gene3D G3DSA:1.10.150.130 83 188 2.6E-25 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS06655 0f98ed71b4e7fc4aa7556ef54760b7be 376 Gene3D G3DSA:1.10.443.10 192 374 2.5E-40 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS06655 0f98ed71b4e7fc4aa7556ef54760b7be 376 Pfam PF00589 Phage integrase family 193 366 8.1E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS06655 0f98ed71b4e7fc4aa7556ef54760b7be 376 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 2 71 3.7E-23 T 22-04-2016 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 PANTHER PTHR35892:SF3 2 171 2.2E-129 T 22-04-2016 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 46 54 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 1.7E-39 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 85 108 1.7E-39 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 159 170 1.7E-39 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 132 153 1.7E-39 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 SUPERFAMILY SSF56925 27 171 2.62E-34 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 163 171 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 Pfam PF13505 Outer membrane protein beta-barrel domain 9 171 3.7E-23 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 PANTHER PTHR35892 2 171 2.2E-129 T 22-04-2016 APECO1_RS03955 1f42062652e327a66a7fccdab455504e 171 Gene3D G3DSA:2.40.160.20 26 171 2.4E-46 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS13380 519da30d30242615786d2a37d76af594 564 Gene3D G3DSA:3.40.50.1220 195 337 5.8E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS13380 519da30d30242615786d2a37d76af594 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 402 540 2.5E-24 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APECO1_RS13380 519da30d30242615786d2a37d76af594 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 178 4.9E-47 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APECO1_RS13380 519da30d30242615786d2a37d76af594 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 327 6.5E-32 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APECO1_RS13380 519da30d30242615786d2a37d76af594 564 PANTHER PTHR18968 1 551 2.5E-202 T 22-04-2016 APECO1_RS13380 519da30d30242615786d2a37d76af594 564 SUPERFAMILY SSF52467 195 353 9.0E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS13380 519da30d30242615786d2a37d76af594 564 Gene3D G3DSA:3.40.50.970 8 180 1.5E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS13380 519da30d30242615786d2a37d76af594 564 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 6 559 0.0 T 22-04-2016 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696|UniPathway: UPA00540 APECO1_RS13380 519da30d30242615786d2a37d76af594 564 SUPERFAMILY SSF52518 7 184 8.1E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS13380 519da30d30242615786d2a37d76af594 564 SUPERFAMILY SSF52518 369 547 8.85E-40 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS13380 519da30d30242615786d2a37d76af594 564 Gene3D G3DSA:3.40.50.970 362 549 3.1E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS13380 519da30d30242615786d2a37d76af594 564 PANTHER PTHR18968:SF6 1 551 2.5E-202 T 22-04-2016 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PANTHER PTHR10169 1 553 0.0 T 22-04-2016 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PANTHER PTHR10169 722 804 0.0 T 22-04-2016 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.8E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 117.131 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 Gene3D G3DSA:3.40.50.670 404 550 1.2E-101 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 Gene3D G3DSA:3.40.50.670 718 786 1.2E-101 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 Gene3D G3DSA:3.30.230.10 220 392 1.2E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 Pfam PF01751 Toprim domain 419 531 4.0E-18 T 22-04-2016 IPR006171 Toprim domain APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 5.8E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 5.8E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 5.8E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 5.8E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 5.8E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 5.8E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 5.8E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 5.8E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 5.8E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 SUPERFAMILY SSF54211 221 392 5.12E-62 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 SMART SM00433 35 797 2.7E-283 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 6.7E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 2.6E-30 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 SUPERFAMILY SSF56719 730 795 8.11E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 SUPERFAMILY SSF56719 394 560 8.11E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 Gene3D G3DSA:3.30.565.10 15 218 1.4E-92 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 Pfam PF00204 DNA gyrase B 221 390 2.8E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 SMART SM00387 31 175 2.6E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS21135 703f769fb36448cd96e7dcb7cbcdc57b 804 SUPERFAMILY SSF55874 4 220 1.01E-77 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 233 250 2.8E-36 T 22-04-2016 IPR006129 Adhesin B GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 54 72 2.8E-36 T 22-04-2016 IPR006129 Adhesin B GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 29 50 2.8E-36 T 22-04-2016 IPR006129 Adhesin B GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 184 201 2.8E-36 T 22-04-2016 IPR006129 Adhesin B GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 73 92 2.8E-36 T 22-04-2016 IPR006129 Adhesin B GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 255 273 2.8E-36 T 22-04-2016 IPR006129 Adhesin B GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00691 Adhesin B signature 210 228 2.8E-36 T 22-04-2016 IPR006129 Adhesin B GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 60 73 4.5E-42 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 184 205 4.5E-42 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 29 47 4.5E-42 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 263 282 4.5E-42 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 73 90 4.5E-42 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PRINTS PR00690 Adhesin family signature 237 255 4.5E-42 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 295 2.0E-73 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PANTHER PTHR30477 14 297 1.5E-150 T 22-04-2016 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 Gene3D G3DSA:3.40.50.1980 22 176 9.3E-51 T 22-04-2016 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 SUPERFAMILY SSF53807 25 298 8.34E-90 T 22-04-2016 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 Gene3D G3DSA:3.40.50.1980 177 298 3.1E-40 T 22-04-2016 APECO1_RS06095 b8a41369de93c640c0341ac60bfefc99 304 PANTHER PTHR30477:SF12 14 297 1.5E-150 T 22-04-2016 APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 Gene3D G3DSA:3.40.50.2300 1 119 9.7E-37 T 22-04-2016 APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 1.3E-97 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 SUPERFAMILY SSF52172 1 118 1.71E-38 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 SMART SM00862 146 221 1.2E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 Gene3D G3DSA:1.10.10.10 126 223 9.8E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 Pfam PF00072 Response regulator receiver domain 4 113 5.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 SUPERFAMILY SSF46894 126 223 1.76E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 PANTHER PTHR26402:SF575 1 222 4.3E-101 T 22-04-2016 APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.1E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 PANTHER PTHR26402 1 222 4.3E-101 T 22-04-2016 APECO1_RS02750 4dd31fadffaa9a241f38483c086aa107 227 SMART SM00448 1 112 1.8E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 Gene3D G3DSA:1.10.45.10 432 471 2.8E-9 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 Gene3D G3DSA:3.30.43.10 15 109 1.4E-26 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 Gene3D G3DSA:3.30.465.10 112 231 1.5E-31 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 59 470 7.0E-191 T 22-04-2016 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 PANTHER PTHR11748:SF78 1 487 2.9E-215 T 22-04-2016 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 SUPERFAMILY SSF56176 21 231 1.45E-64 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 PANTHER PTHR11748 1 487 2.9E-215 T 22-04-2016 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 SUPERFAMILY SSF55103 204 474 6.7E-78 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 Pfam PF01565 FAD binding domain 56 194 1.9E-34 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APECO1_RS17290 1407f31b6e5d1a6d78dfd6eec56c26e6 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 230 470 5.5E-69 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APECO1_RS14410 69a9935232c1b7a671455cb812894b8a 327 PANTHER PTHR30036:SF2 1 327 3.5E-104 T 22-04-2016 APECO1_RS14410 69a9935232c1b7a671455cb812894b8a 327 Gene3D G3DSA:3.40.50.2300 157 312 9.7E-25 T 22-04-2016 APECO1_RS14410 69a9935232c1b7a671455cb812894b8a 327 Pfam PF13407 Periplasmic binding protein domain 40 294 1.3E-30 T 22-04-2016 IPR025997 Periplasmic binding protein APECO1_RS14410 69a9935232c1b7a671455cb812894b8a 327 PANTHER PTHR30036 1 327 3.5E-104 T 22-04-2016 APECO1_RS14410 69a9935232c1b7a671455cb812894b8a 327 SUPERFAMILY SSF53822 29 312 1.4E-46 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS14410 69a9935232c1b7a671455cb812894b8a 327 Gene3D G3DSA:3.40.50.2300 31 156 5.3E-28 T 22-04-2016 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 8.7E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 SUPERFAMILY SSF100950 67 229 6.84E-29 T 22-04-2016 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 SMART SM01134 67 228 1.4E-56 T 22-04-2016 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 PANTHER PTHR30363:SF16 1 248 2.9E-170 T 22-04-2016 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 PANTHER PTHR30363 1 248 2.9E-170 T 22-04-2016 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 SUPERFAMILY SSF46785 1 60 3.04E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 Gene3D G3DSA:1.10.10.10 2 52 1.7E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 7.7E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 7.7E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 SMART SM00420 4 56 2.0E-24 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 Pfam PF00455 DeoR C terminal sensor domain 69 227 9.8E-46 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS07120 1d55a5bb75fd12e6bc7a9c23d7c14edb 249 Gene3D G3DSA:3.40.50.1360 70 210 1.9E-10 T 22-04-2016 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 Gene3D G3DSA:3.30.420.40 258 489 1.3E-47 T 22-04-2016 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 SUPERFAMILY SSF53067 4 252 3.33E-63 T 22-04-2016 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 PIRSF PIRSF000538 2 495 2.5E-100 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 440 2.8E-20 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 4.9E-93 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 PANTHER PTHR10196:SF73 1 498 0.0 T 22-04-2016 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 PANTHER PTHR10196 1 498 0.0 T 22-04-2016 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 SUPERFAMILY SSF53067 256 489 1.44E-53 T 22-04-2016 APECO1_RS20525 14e6826c379d5e24c4d797aac7793fe6 498 Gene3D G3DSA:3.30.420.40 1 246 9.4E-61 T 22-04-2016 APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 SUPERFAMILY SSF50249 3 69 6.86E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 PRINTS PR00050 Cold shock protein signature 7 22 1.4E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 PRINTS PR00050 Cold shock protein signature 43 61 1.4E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 PRINTS PR00050 Cold shock protein signature 28 37 1.4E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 PANTHER PTHR11544:SF54 1 70 4.2E-47 T 22-04-2016 APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.9E-31 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 Gene3D G3DSA:2.40.50.140 5 68 3.3E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 PANTHER PTHR11544 1 70 4.2E-47 T 22-04-2016 APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 SMART SM00357 6 70 6.4E-28 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 PIRSF PIRSF002599 1 70 7.8E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APECO1_RS25350 b98c3a56239a4d41bb1c4e941f252f75 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 249 3.9E-26 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 46.034 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 SMART SM00279 162 197 2.0E-11 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 PANTHER PTHR10133:SF39 2 249 1.3E-178 T 22-04-2016 APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 SUPERFAMILY SSF88723 4 159 1.57E-37 T 22-04-2016 IPR029060 PIN domain-like APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 Gene3D G3DSA:3.40.50.1010 4 174 2.8E-49 T 22-04-2016 IPR029060 PIN domain-like APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 Gene3D G3DSA:1.10.150.20 175 235 2.2E-25 T 22-04-2016 APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 SMART SM00475 3 250 7.1E-110 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 PANTHER PTHR10133 2 249 1.3E-178 T 22-04-2016 APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 146 1.8E-28 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APECO1_RS15870 9c14cf7e5369adb54581437e1ae98896 251 SUPERFAMILY SSF47807 160 243 9.57E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 1.1E-13 T 22-04-2016 APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 PANTHER PTHR30154:SF2 1 152 6.3E-65 T 22-04-2016 APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 SMART SM00344 6 113 7.8E-45 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 SUPERFAMILY SSF54909 68 152 2.28E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 SUPERFAMILY SSF46785 4 66 1.06E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.7E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.7E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.7E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 6.5E-18 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 Gene3D G3DSA:1.10.10.10 1 57 4.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 PANTHER PTHR30154 1 152 6.3E-65 T 22-04-2016 APECO1_RS21355 8aa5523875d6f43ba583137b1e8cb515 152 Gene3D G3DSA:3.30.70.920 70 143 9.9E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 66 74 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 212 4.4E-25 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 PANTHER PTHR21198 1 260 8.3E-112 T 22-04-2016 APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 SUPERFAMILY SSF53681 104 256 3.49E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 PANTHER PTHR21198:SF2 1 260 8.3E-112 T 22-04-2016 APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 SUPERFAMILY SSF53681 1 102 1.83E-30 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 177 187 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 TIGRFAM TIGR00067 glut_race: glutamate racemase 1 249 1.2E-97 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 Hamap MF_00258 Glutamate racemase [murI]. 1 251 33.041 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22645 28f4b314bcab123a7b442b2cdc606212 262 Gene3D G3DSA:3.40.50.1860 1 168 4.8E-48 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS23805 924006d07bd2c7986f4bcf329a30da14 409 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 304 406 8.3E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23805 924006d07bd2c7986f4bcf329a30da14 409 Gene3D G3DSA:3.30.565.10 259 408 5.7E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23805 924006d07bd2c7986f4bcf329a30da14 409 Pfam PF06580 Histidine kinase 204 284 3.9E-26 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APECO1_RS23805 924006d07bd2c7986f4bcf329a30da14 409 Pfam PF10114 Sensory domain found in PocR 9 171 3.2E-44 T 22-04-2016 IPR018771 PocR domain UniPathway: UPA00148|UniPathway: UPA00621 APECO1_RS23805 924006d07bd2c7986f4bcf329a30da14 409 PANTHER PTHR34220 198 408 2.4E-48 T 22-04-2016 APECO1_RS23805 924006d07bd2c7986f4bcf329a30da14 409 SUPERFAMILY SSF55874 261 405 7.99E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23805 924006d07bd2c7986f4bcf329a30da14 409 PANTHER PTHR34220:SF3 198 408 2.4E-48 T 22-04-2016 APECO1_RS20895 0b29ee67498da63b4890270cd9e92628 363 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 9 335 2.3E-93 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APECO1_RS20895 0b29ee67498da63b4890270cd9e92628 363 Pfam PF02378 Phosphotransferase system, EIIC 19 214 4.4E-10 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS20895 0b29ee67498da63b4890270cd9e92628 363 PANTHER PTHR30505:SF0 3 358 3.1E-122 T 22-04-2016 APECO1_RS20895 0b29ee67498da63b4890270cd9e92628 363 PANTHER PTHR30505 3 358 3.1E-122 T 22-04-2016 APECO1_RS09570 be668420c9b293ec33a5a9c5a90f33ad 167 Gene3D G3DSA:3.90.960.10 7 161 3.3E-33 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APECO1_RS09570 be668420c9b293ec33a5a9c5a90f33ad 167 PANTHER PTHR30411 1 165 5.6E-129 T 22-04-2016 APECO1_RS09570 be668420c9b293ec33a5a9c5a90f33ad 167 Pfam PF04073 Aminoacyl-tRNA editing domain 30 154 1.7E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APECO1_RS09570 be668420c9b293ec33a5a9c5a90f33ad 167 PANTHER PTHR30411:SF5 1 165 5.6E-129 T 22-04-2016 APECO1_RS09570 be668420c9b293ec33a5a9c5a90f33ad 167 SUPERFAMILY SSF55826 10 163 2.35E-35 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APECO1_RS08365 0a633e4b188bd2a959403c010d5ba278 308 PANTHER PTHR12544 7 308 1.1E-168 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APECO1_RS08365 0a633e4b188bd2a959403c010d5ba278 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 1.9E-131 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APECO1_RS08365 0a633e4b188bd2a959403c010d5ba278 308 Pfam PF04960 Glutaminase 24 308 6.7E-114 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APECO1_RS08365 0a633e4b188bd2a959403c010d5ba278 308 Gene3D G3DSA:3.40.710.10 8 308 1.3E-126 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS08365 0a633e4b188bd2a959403c010d5ba278 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 47.251 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APECO1_RS08365 0a633e4b188bd2a959403c010d5ba278 308 SUPERFAMILY SSF56601 7 308 1.22E-115 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 SUPERFAMILY SSF81464 29 116 8.34E-24 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 Gene3D G3DSA:2.60.40.420 121 281 9.7E-42 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 Pfam PF06481 COX Aromatic Rich Motif 239 285 9.1E-19 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 PIRSF PIRSF000292 1 313 1.2E-133 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 SUPERFAMILY SSF49503 120 282 8.52E-54 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 7.3E-124 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 Gene3D G3DSA:1.10.287.90 29 113 4.5E-37 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 PANTHER PTHR22888 1 268 7.6E-162 T 22-04-2016 APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 PANTHER PTHR22888:SF13 1 268 7.6E-162 T 22-04-2016 APECO1_RS02195 dd28dbcede975439281aef66d453c1bc 318 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 150 218 3.3E-5 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 APECO1_RS05705 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SUPERFAMILY SSF52172 1 173 1.12E-37 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS05705 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Gene3D G3DSA:1.10.10.10 124 221 1.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS05705 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SMART SM00862 145 220 2.2E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS05705 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS05705 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 7.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS05705 9ee5ab5b0947d03502e5c0eddd90eb2a 223 PANTHER PTHR26402 1 223 2.8E-166 T 22-04-2016 APECO1_RS05705 9ee5ab5b0947d03502e5c0eddd90eb2a 223 Gene3D G3DSA:3.40.50.2300 1 122 4.1E-35 T 22-04-2016 APECO1_RS05705 9ee5ab5b0947d03502e5c0eddd90eb2a 223 SMART SM00448 1 112 4.7E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS05705 9ee5ab5b0947d03502e5c0eddd90eb2a 223 PANTHER PTHR26402:SF537 1 223 2.8E-166 T 22-04-2016 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 SUPERFAMILY SSF81593 287 436 4.08E-46 T 22-04-2016 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 PANTHER PTHR30621 1 942 0.0 T 22-04-2016 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 SUPERFAMILY SSF81301 9 286 4.51E-91 T 22-04-2016 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 SUPERFAMILY SSF81301 525 815 2.22E-89 T 22-04-2016 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 27 945 20.183 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 Gene3D G3DSA:3.30.460.10 639 811 9.4E-63 T 22-04-2016 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 Gene3D G3DSA:3.30.460.10 113 285 4.7E-62 T 22-04-2016 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 1.1E-102 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 31 276 4.9E-99 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 1.6E-45 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 Pfam PF08335 GlnD PII-uridylyltransferase 825 916 4.2E-12 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APECO1_RS17770 0c57683e1ccf2176ef2eabd95b026497 946 SUPERFAMILY SSF81593 818 943 1.96E-33 T 22-04-2016 APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 Pfam PF00664 ABC transporter transmembrane region 26 295 2.1E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 Pfam PF00005 ABC transporter 357 505 2.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 SUPERFAMILY SSF90123 12 325 5.76E-70 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 SUPERFAMILY SSF52540 336 576 5.23E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 PANTHER PTHR24221:SF256 1 584 0.0 T 22-04-2016 APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 Gene3D G3DSA:1.20.1560.10 12 325 9.6E-77 T 22-04-2016 APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 Gene3D G3DSA:3.40.50.300 341 580 4.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 SMART SM00382 366 557 1.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS02285 c0bfdaacbc4033c949c0c3251a54189e 593 PANTHER PTHR24221 1 584 0.0 T 22-04-2016 APECO1_RS07985 56e10ebb7b7104866589f26e5426d970 78 SMART SM00530 21 76 3.7E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS07985 56e10ebb7b7104866589f26e5426d970 78 Pfam PF01381 Helix-turn-helix 28 74 1.6E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS07985 56e10ebb7b7104866589f26e5426d970 78 SUPERFAMILY SSF47413 22 76 9.25E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS07985 56e10ebb7b7104866589f26e5426d970 78 Gene3D G3DSA:1.10.260.40 27 73 2.2E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 SUPERFAMILY SSF47240 10 167 5.13E-50 T 22-04-2016 IPR009078 Ferritin-like superfamily APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 PIRSF PIRSF005900 8 167 2.3E-43 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 PANTHER PTHR30295:SF4 9 167 4.7E-98 T 22-04-2016 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 1.9E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 1.9E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.9E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 PANTHER PTHR30295 9 167 4.7E-98 T 22-04-2016 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 Gene3D G3DSA:1.20.1260.10 2 167 1.4E-53 T 22-04-2016 IPR012347 Ferritin-related APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 Pfam PF00210 Ferritin-like domain 31 166 5.5E-22 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APECO1_RS03945 36aa46c3c11c46dd41f216524ccbb299 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 50.452 T 22-04-2016 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 APECO1_RS08685 b2c1e30af19fa40e5767bc8668149a38 196 PANTHER PTHR30055:SF19 1 179 3.7E-56 T 22-04-2016 APECO1_RS08685 b2c1e30af19fa40e5767bc8668149a38 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.8E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS08685 b2c1e30af19fa40e5767bc8668149a38 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.8E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS08685 b2c1e30af19fa40e5767bc8668149a38 196 SUPERFAMILY SSF46689 1 79 1.8E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS08685 b2c1e30af19fa40e5767bc8668149a38 196 Gene3D G3DSA:1.10.357.10 5 192 1.7E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS08685 b2c1e30af19fa40e5767bc8668149a38 196 SUPERFAMILY SSF48498 84 168 9.93E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS08685 b2c1e30af19fa40e5767bc8668149a38 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APECO1_RS08685 b2c1e30af19fa40e5767bc8668149a38 196 PANTHER PTHR30055 1 179 3.7E-56 T 22-04-2016 APECO1_RS08685 b2c1e30af19fa40e5767bc8668149a38 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 7.1E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS20785 356707d78cfa27cacb1fc8c75fc05c43 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 53.532 T 22-04-2016 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily APECO1_RS20785 356707d78cfa27cacb1fc8c75fc05c43 222 PANTHER PTHR30471 1 222 6.8E-144 T 22-04-2016 APECO1_RS20785 356707d78cfa27cacb1fc8c75fc05c43 222 SUPERFAMILY SSF47781 17 85 4.31E-8 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APECO1_RS20785 356707d78cfa27cacb1fc8c75fc05c43 222 Pfam PF04002 RadC-like JAB domain 103 220 1.6E-43 T 22-04-2016 IPR025657 RadC-like JAB domain APECO1_RS20785 356707d78cfa27cacb1fc8c75fc05c43 222 Gene3D G3DSA:3.40.140.10 99 222 3.3E-49 T 22-04-2016 APECO1_RS20785 356707d78cfa27cacb1fc8c75fc05c43 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APECO1_RS20785 356707d78cfa27cacb1fc8c75fc05c43 222 PANTHER PTHR30471:SF5 1 222 6.8E-144 T 22-04-2016 APECO1_RS20785 356707d78cfa27cacb1fc8c75fc05c43 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 9 222 5.5E-97 T 22-04-2016 IPR001405 RadC protein APECO1_RS00685 83e24d1b011dea566c31f593927c9702 178 PANTHER PTHR22573 1 171 1.4E-80 T 22-04-2016 APECO1_RS00685 83e24d1b011dea566c31f593927c9702 178 Pfam PF00156 Phosphoribosyl transferase domain 13 160 3.5E-23 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APECO1_RS00685 83e24d1b011dea566c31f593927c9702 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 1.3E-73 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 APECO1_RS00685 83e24d1b011dea566c31f593927c9702 178 SUPERFAMILY SSF53271 3 173 1.97E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS00685 83e24d1b011dea566c31f593927c9702 178 PANTHER PTHR22573:SF56 1 171 1.4E-80 T 22-04-2016 APECO1_RS00685 83e24d1b011dea566c31f593927c9702 178 Gene3D G3DSA:3.40.50.2020 2 173 2.5E-78 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS23475 456ecd0d0556e67d5ac36dfa63011465 354 PIRSF PIRSF007313 1 354 3.7E-157 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 APECO1_RS23475 456ecd0d0556e67d5ac36dfa63011465 354 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 2.7E-153 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 APECO1_RS09110 35e1edd6f41d9a528b07e2aaaa0245cc 254 Pfam PF01012 Electron transfer flavoprotein domain 28 206 1.5E-35 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS09110 35e1edd6f41d9a528b07e2aaaa0245cc 254 PANTHER PTHR21294 1 251 6.0E-86 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APECO1_RS09110 35e1edd6f41d9a528b07e2aaaa0245cc 254 PIRSF PIRSF000090 1 254 3.3E-62 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APECO1_RS09110 35e1edd6f41d9a528b07e2aaaa0245cc 254 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 APECO1_RS09110 35e1edd6f41d9a528b07e2aaaa0245cc 254 PANTHER PTHR21294:SF0 1 251 6.0E-86 T 22-04-2016 APECO1_RS09110 35e1edd6f41d9a528b07e2aaaa0245cc 254 Gene3D G3DSA:3.40.50.620 1 251 6.9E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS09110 35e1edd6f41d9a528b07e2aaaa0245cc 254 SMART SM00893 21 211 5.6E-35 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS09110 35e1edd6f41d9a528b07e2aaaa0245cc 254 SUPERFAMILY SSF52402 1 250 2.09E-54 T 22-04-2016 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 SUPERFAMILY SSF51998 222 740 1.5E-170 T 22-04-2016 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 Pfam PF03477 ATP cone domain 6 92 2.8E-15 T 22-04-2016 IPR005144 ATP-cone domain APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 SUPERFAMILY SSF48168 10 221 4.71E-74 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 PANTHER PTHR11573 6 752 0.0 T 22-04-2016 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 7.2E-181 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 PANTHER PTHR11573:SF17 6 752 0.0 T 22-04-2016 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.5E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.5E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.5E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.5E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.5E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.5E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 Gene3D G3DSA:3.20.70.20 129 344 8.7E-44 T 22-04-2016 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 Gene3D G3DSA:3.20.70.20 398 559 8.7E-44 T 22-04-2016 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 Gene3D G3DSA:3.20.70.20 610 700 8.7E-44 T 22-04-2016 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 2.9E-12 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS12465 3e535e98acb0b385faad5ed3c59eda59 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 9.7E-120 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS00070 da371d6d0fba981cfd8652894fbee503 134 Hamap MF_01372 UPF0412 protein YaaI [yaaI]. 1 134 51.32 T 22-04-2016 IPR020240 Uncharacterised protein family UPF0412, YaaI APECO1_RS00070 da371d6d0fba981cfd8652894fbee503 134 Pfam PF10807 Protein of unknown function (DUF2541) 3 132 2.2E-63 T 22-04-2016 IPR020240 Uncharacterised protein family UPF0412, YaaI APECO1_RS00070 da371d6d0fba981cfd8652894fbee503 134 ProDom PD082838 YAAI PERIPLASMIC STY0011 ECS0013 PRECURSOR SIGNAL 16 134 3.0E-66 T 22-04-2016 IPR020240 Uncharacterised protein family UPF0412, YaaI APECO1_RS19855 6b217f4d5af8d85ecdd645e88f396cda 198 PANTHER PTHR18895:SF60 11 192 1.8E-55 T 22-04-2016 APECO1_RS19855 6b217f4d5af8d85ecdd645e88f396cda 198 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS19855 6b217f4d5af8d85ecdd645e88f396cda 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 1.4E-79 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS19855 6b217f4d5af8d85ecdd645e88f396cda 198 SUPERFAMILY SSF53335 11 189 4.43E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS19855 6b217f4d5af8d85ecdd645e88f396cda 198 Pfam PF03602 Conserved hypothetical protein 95 12 188 8.0E-63 T 22-04-2016 APECO1_RS19855 6b217f4d5af8d85ecdd645e88f396cda 198 PIRSF PIRSF004553 11 191 4.1E-62 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS19855 6b217f4d5af8d85ecdd645e88f396cda 198 Gene3D G3DSA:3.40.50.150 5 194 5.7E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS19855 6b217f4d5af8d85ecdd645e88f396cda 198 PANTHER PTHR18895 11 192 1.8E-55 T 22-04-2016 APECO1_RS23115 8d902575288bd7cf0dfe0b87fbf9ed53 466 PANTHER PTHR23508 1 458 1.7E-124 T 22-04-2016 APECO1_RS23115 8d902575288bd7cf0dfe0b87fbf9ed53 466 PANTHER PTHR23508:SF1 1 458 1.7E-124 T 22-04-2016 APECO1_RS23115 8d902575288bd7cf0dfe0b87fbf9ed53 466 SUPERFAMILY SSF103473 7 446 1.96E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS23115 8d902575288bd7cf0dfe0b87fbf9ed53 466 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS23115 8d902575288bd7cf0dfe0b87fbf9ed53 466 Pfam PF00083 Sugar (and other) transporter 232 445 1.0E-6 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS23115 8d902575288bd7cf0dfe0b87fbf9ed53 466 Pfam PF00083 Sugar (and other) transporter 23 229 7.0E-24 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS23115 8d902575288bd7cf0dfe0b87fbf9ed53 466 Gene3D G3DSA:1.20.1250.20 19 225 2.8E-21 T 22-04-2016 APECO1_RS23115 8d902575288bd7cf0dfe0b87fbf9ed53 466 Gene3D G3DSA:1.20.1250.20 243 442 2.4E-15 T 22-04-2016 APECO1_RS02385 6d41a83e06643bdacab599c5dd5ed77c 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 39.352 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APECO1_RS02385 6d41a83e06643bdacab599c5dd5ed77c 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 2.8E-75 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APECO1_RS02385 6d41a83e06643bdacab599c5dd5ed77c 183 SUPERFAMILY SSF53271 12 180 7.1E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS02385 6d41a83e06643bdacab599c5dd5ed77c 183 Gene3D G3DSA:3.40.50.2020 7 179 8.4E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS02385 6d41a83e06643bdacab599c5dd5ed77c 183 PANTHER PTHR11776:SF0 6 183 5.3E-86 T 22-04-2016 APECO1_RS02385 6d41a83e06643bdacab599c5dd5ed77c 183 PANTHER PTHR11776 6 183 5.3E-86 T 22-04-2016 APECO1_RS02385 6d41a83e06643bdacab599c5dd5ed77c 183 Pfam PF00156 Phosphoribosyl transferase domain 31 156 2.1E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APECO1_RS24235 435a29690e01daf065151735c4adf62b 379 SUPERFAMILY SSF46548 139 256 5.23E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS24235 435a29690e01daf065151735c4adf62b 379 PANTHER PTHR30002 2 371 1.0E-218 T 22-04-2016 APECO1_RS24235 435a29690e01daf065151735c4adf62b 379 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 3.7E-19 T 22-04-2016 APECO1_RS24235 435a29690e01daf065151735c4adf62b 379 PANTHER PTHR30002:SF4 2 371 1.0E-218 T 22-04-2016 APECO1_RS24235 435a29690e01daf065151735c4adf62b 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 6.3E-154 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS24235 435a29690e01daf065151735c4adf62b 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS24235 435a29690e01daf065151735c4adf62b 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 1.2E-23 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS24235 435a29690e01daf065151735c4adf62b 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.335 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS24235 435a29690e01daf065151735c4adf62b 379 Gene3D G3DSA:3.30.70.20 190 257 5.1E-6 T 22-04-2016 APECO1_RS20825 65fb447cec3050795b513dd9a2f962e2 205 Pfam PF03458 UPF0126 domain 91 164 7.2E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 APECO1_RS20825 65fb447cec3050795b513dd9a2f962e2 205 Pfam PF03458 UPF0126 domain 5 79 1.5E-18 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 APECO1_RS20825 65fb447cec3050795b513dd9a2f962e2 205 PANTHER PTHR30506 1 205 1.5E-135 T 22-04-2016 APECO1_RS20825 65fb447cec3050795b513dd9a2f962e2 205 PANTHER PTHR30506:SF2 1 205 1.5E-135 T 22-04-2016 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.7E-45 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 Gene3D G3DSA:3.40.50.1370 145 292 2.5E-56 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.5E-126 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.7E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 5.7E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 5.7E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.7E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 SUPERFAMILY SSF53671 4 306 7.73E-101 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.022 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PANTHER PTHR11405 1 305 3.3E-149 T 22-04-2016 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 Gene3D G3DSA:3.40.50.1370 7 144 1.3E-52 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 PANTHER PTHR11405:SF16 1 305 3.3E-149 T 22-04-2016 APECO1_RS24655 9d0c600b70c827b4f4c4c35dd66337e1 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 4.2E-29 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APECO1_RS24060 7f69f53704b691ef1c54d32ac135c315 421 Gene3D G3DSA:1.10.443.10 206 384 3.4E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS24060 7f69f53704b691ef1c54d32ac135c315 421 SUPERFAMILY SSF56349 97 388 5.59E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS24060 7f69f53704b691ef1c54d32ac135c315 421 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 1.4E-21 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 APECO1_RS24060 7f69f53704b691ef1c54d32ac135c315 421 Gene3D G3DSA:1.10.150.130 97 193 4.9E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS24060 7f69f53704b691ef1c54d32ac135c315 421 PANTHER PTHR30629 1 418 3.2E-156 T 22-04-2016 APECO1_RS24060 7f69f53704b691ef1c54d32ac135c315 421 PANTHER PTHR30629:SF4 1 418 3.2E-156 T 22-04-2016 APECO1_RS24060 7f69f53704b691ef1c54d32ac135c315 421 Pfam PF00589 Phage integrase family 211 382 3.1E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.0E-46 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 27 98 1.7E-28 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.7E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 PANTHER PTHR32071 5 98 3.4E-34 T 22-04-2016 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APECO1_RS18765 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 PANTHER PTHR21000:SF11 406 616 0.0 T 22-04-2016 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 SUPERFAMILY SSF143975 3 420 2.48E-135 T 22-04-2016 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.429 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 SUPERFAMILY SSF52016 421 610 3.84E-60 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 Pfam PF00920 Dehydratase family 34 607 9.0E-219 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 8.8E-274 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 PANTHER PTHR21000 406 616 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21485 b49d3d049d4dfbc956b3f3d5cccc4d24 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 SUPERFAMILY SSF53822 63 326 2.36E-55 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 SUPERFAMILY SSF47413 4 63 9.57E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 Gene3D G3DSA:3.40.50.2300 62 173 5.0E-32 T 22-04-2016 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 PANTHER PTHR30146:SF37 5 327 1.5E-253 T 22-04-2016 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 Pfam PF13377 Periplasmic binding protein-like domain 176 329 1.3E-24 T 22-04-2016 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 Gene3D G3DSA:1.10.260.40 4 58 3.6E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.3E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 PANTHER PTHR30146 5 327 1.5E-253 T 22-04-2016 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 SMART SM00354 5 75 1.2E-28 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS24745 f931cdb6cc87259ee3f5faffbc176094 332 Gene3D G3DSA:3.40.50.2300 174 329 1.3E-39 T 22-04-2016 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 Gene3D G3DSA:3.40.50.1360 77 222 8.3E-11 T 22-04-2016 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 SUPERFAMILY SSF46785 5 58 5.94E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 PANTHER PTHR30363 1 255 1.9E-171 T 22-04-2016 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.1E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 SMART SM00420 6 58 2.9E-25 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 SMART SM01134 73 233 8.1E-68 T 22-04-2016 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 Gene3D G3DSA:1.10.10.10 5 54 1.3E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.8E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.8E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 Pfam PF00455 DeoR C terminal sensor domain 76 231 5.0E-51 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 SUPERFAMILY SSF100950 76 235 3.87E-28 T 22-04-2016 APECO1_RS15560 7234ca7aa70841a9cbdd07be25f5dc03 255 PANTHER PTHR30363:SF5 1 255 1.9E-171 T 22-04-2016 APECO1_RS04235 96f880d2c1891d9641885ad4e5612255 333 Pfam PF01212 Beta-eliminating lyase 3 282 1.7E-96 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 APECO1_RS04235 96f880d2c1891d9641885ad4e5612255 333 SUPERFAMILY SSF53383 1 331 1.48E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS04235 96f880d2c1891d9641885ad4e5612255 333 Gene3D G3DSA:3.90.1150.10 246 332 1.6E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS04235 96f880d2c1891d9641885ad4e5612255 333 PANTHER PTHR10289 1 333 2.3E-155 T 22-04-2016 APECO1_RS04235 96f880d2c1891d9641885ad4e5612255 333 PIRSF PIRSF017617 1 333 2.0E-129 T 22-04-2016 IPR023603 Threonine aldolase APECO1_RS04235 96f880d2c1891d9641885ad4e5612255 333 Gene3D G3DSA:3.40.640.10 1 245 1.9E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS19620 bf1a9c37700a212a60134e0981451d56 187 Pfam PF00419 Fimbrial protein 34 187 1.1E-21 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS19620 bf1a9c37700a212a60134e0981451d56 187 SUPERFAMILY SSF49401 32 187 6.46E-32 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS19620 bf1a9c37700a212a60134e0981451d56 187 Gene3D G3DSA:2.60.40.1090 31 187 4.6E-38 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS19620 bf1a9c37700a212a60134e0981451d56 187 PANTHER PTHR33420 1 187 6.4E-40 T 22-04-2016 APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 Gene3D G3DSA:3.40.50.720 3 246 6.4E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 SUPERFAMILY SSF51735 3 245 6.2E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PANTHER PTHR24322:SF402 7 137 2.2E-91 T 22-04-2016 APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PANTHER PTHR24322:SF402 153 189 2.2E-91 T 22-04-2016 APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 243 7.8E-60 T 22-04-2016 APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PANTHER PTHR24322 7 137 2.2E-91 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PANTHER PTHR24322 153 189 2.2E-91 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS11955 61956a3a264aa21a58cc466f03d9114f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS23320 0e568856286e2e6d0a6c0e99aadb0bf3 198 SUPERFAMILY SSF48452 60 171 4.55E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS23320 0e568856286e2e6d0a6c0e99aadb0bf3 198 SMART SM00028 73 106 0.0061 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS23320 0e568856286e2e6d0a6c0e99aadb0bf3 198 SMART SM00028 144 177 25.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS23320 0e568856286e2e6d0a6c0e99aadb0bf3 198 Gene3D G3DSA:1.25.40.10 66 112 1.6E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS23320 0e568856286e2e6d0a6c0e99aadb0bf3 198 Gene3D G3DSA:1.25.40.10 113 193 1.9E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14425 dcfc4b075be45d8d8d4d72d556b4bdb7 417 PANTHER PTHR11680:SF9 1 416 0.0 T 22-04-2016 APECO1_RS14425 dcfc4b075be45d8d8d4d72d556b4bdb7 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 5.0E-192 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APECO1_RS14425 dcfc4b075be45d8d8d4d72d556b4bdb7 417 PANTHER PTHR11680 1 416 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APECO1_RS14425 dcfc4b075be45d8d8d4d72d556b4bdb7 417 PIRSF PIRSF000412 1 417 5.3E-177 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APECO1_RS14425 dcfc4b075be45d8d8d4d72d556b4bdb7 417 Gene3D G3DSA:3.40.640.10 37 285 5.2E-111 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS14425 dcfc4b075be45d8d8d4d72d556b4bdb7 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.473 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APECO1_RS14425 dcfc4b075be45d8d8d4d72d556b4bdb7 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APECO1_RS14425 dcfc4b075be45d8d8d4d72d556b4bdb7 417 SUPERFAMILY SSF53383 6 416 2.45E-187 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS14425 dcfc4b075be45d8d8d4d72d556b4bdb7 417 Gene3D G3DSA:3.90.1150.10 286 416 1.5E-56 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS19865 8ca974e156348b08e2e94fc2b0be7d03 119 Pfam PF10694 Protein of unknown function (DUF2500) 5 115 1.7E-31 T 22-04-2016 IPR019635 Protein of unknown function DUF2500 APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.0E-117 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 SUPERFAMILY SSF52172 3 184 2.57E-43 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 Pfam PF00072 Response regulator receiver domain 5 117 4.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 PANTHER PTHR26402 3 228 1.1E-156 T 22-04-2016 APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 SMART SM00448 3 116 6.2E-46 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 SMART SM00862 150 225 1.8E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 PANTHER PTHR26402:SF576 3 228 1.1E-156 T 22-04-2016 APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 Gene3D G3DSA:1.10.10.10 129 226 1.0E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.3E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS02030 0e45b31dbd48b4685a1831b0524fc60d 229 Gene3D G3DSA:3.40.50.2300 3 124 2.8E-41 T 22-04-2016 APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 SMART SM00354 6 76 2.9E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 341 8.4E-100 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 SUPERFAMILY SSF53822 63 338 1.03E-51 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 SUPERFAMILY SSF47413 5 64 3.38E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 Gene3D G3DSA:3.40.50.2300 179 325 1.3E-36 T 22-04-2016 APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 PANTHER PTHR30146:SF4 5 339 1.6E-99 T 22-04-2016 APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 PANTHER PTHR30146 5 339 1.6E-99 T 22-04-2016 APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 Gene3D G3DSA:3.40.50.2300 59 178 1.9E-35 T 22-04-2016 APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 9.0E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS08695 ae71dd52805928dfcf13032109184714 342 Gene3D G3DSA:1.10.260.40 7 58 2.8E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS22885 2dc0972e93060428d74468ae6cd18258 434 PANTHER PTHR21631 4 434 9.5E-175 T 22-04-2016 APECO1_RS22885 2dc0972e93060428d74468ae6cd18258 434 PIRSF PIRSF001362 1 434 8.0E-229 T 22-04-2016 APECO1_RS22885 2dc0972e93060428d74468ae6cd18258 434 Gene3D G3DSA:3.20.20.60 4 417 2.6E-172 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS22885 2dc0972e93060428d74468ae6cd18258 434 SUPERFAMILY SSF51621 4 417 1.08E-156 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS22885 2dc0972e93060428d74468ae6cd18258 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 6.2E-94 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 APECO1_RS22885 2dc0972e93060428d74468ae6cd18258 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 255 8.1E-124 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 APECO1_RS22885 2dc0972e93060428d74468ae6cd18258 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 APECO1_RS22885 2dc0972e93060428d74468ae6cd18258 434 Pfam PF00463 Isocitrate lyase family 8 255 3.3E-61 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 APECO1_RS22885 2dc0972e93060428d74468ae6cd18258 434 Pfam PF00463 Isocitrate lyase family 256 434 2.0E-49 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 APECO1_RS11790 7179c1cd26d20438b6013c8edfc13a6b 274 PANTHER PTHR40659 14 273 1.4E-22 T 22-04-2016 APECO1_RS11790 7179c1cd26d20438b6013c8edfc13a6b 274 Pfam PF03824 High-affinity nickel-transport protein 13 273 2.4E-65 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 Gene3D G3DSA:1.10.1860.10 1 87 2.0E-33 T 22-04-2016 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 SUPERFAMILY SSF51645 4 720 1.96E-292 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 Gene3D G3DSA:2.170.170.11 136 262 3.8E-71 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 Gene3D G3DSA:2.170.170.11 296 333 3.8E-71 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 PANTHER PTHR21631 28 41 7.9E-155 T 22-04-2016 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 PANTHER PTHR21631 496 721 7.9E-155 T 22-04-2016 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 3 723 0.0 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 Pfam PF01274 Malate synthase 18 697 2.1E-198 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 Hamap MF_00641 Malate synthase G [glcB]. 1 723 370.791 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 Gene3D G3DSA:3.20.20.360 264 294 3.1E-144 T 22-04-2016 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 Gene3D G3DSA:3.20.20.360 334 588 3.1E-144 T 22-04-2016 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 Gene3D G3DSA:3.20.20.360 89 135 3.1E-144 T 22-04-2016 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 Gene3D G3DSA:1.20.1220.12 590 722 8.0E-75 T 22-04-2016 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 PANTHER PTHR21631:SF7 28 41 7.9E-155 T 22-04-2016 APECO1_RS17270 78b1bda9f578825ae43b5f892da225ef 723 PANTHER PTHR21631:SF7 496 721 7.9E-155 T 22-04-2016 APECO1_RS00605 8440ed5ae23852d8929b47425edd7319 94 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 2 91 8.4E-29 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 APECO1_RS00605 8440ed5ae23852d8929b47425edd7319 94 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 3 21 1.2E-8 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 APECO1_RS00605 8440ed5ae23852d8929b47425edd7319 94 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 70 91 1.2E-8 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 APECO1_RS00605 8440ed5ae23852d8929b47425edd7319 94 Gene3D G3DSA:1.10.1200.20 2 92 6.5E-34 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 APECO1_RS00605 8440ed5ae23852d8929b47425edd7319 94 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 8 91 3.0E-43 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 APECO1_RS00605 8440ed5ae23852d8929b47425edd7319 94 SUPERFAMILY SSF47345 2 92 1.2E-32 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 APECO1_RS08325 e4a30be47d0340585db9031d4b57f746 440 Pfam PF07805 HipA-like N-terminal domain 150 238 3.4E-19 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 APECO1_RS08325 e4a30be47d0340585db9031d4b57f746 440 Pfam PF13657 HipA N-terminal domain 7 103 5.6E-25 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 APECO1_RS08325 e4a30be47d0340585db9031d4b57f746 440 Pfam PF07804 HipA-like C-terminal domain 249 403 2.2E-30 T 22-04-2016 IPR012893 HipA-like, C-terminal APECO1_RS08325 e4a30be47d0340585db9031d4b57f746 440 PANTHER PTHR37419 4 440 2.2E-249 T 22-04-2016 APECO1_RS08325 e4a30be47d0340585db9031d4b57f746 440 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 1.0E-30 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 APECO1_RS08325 e4a30be47d0340585db9031d4b57f746 440 PANTHER PTHR37419:SF3 4 440 2.2E-249 T 22-04-2016 APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 4.8E-57 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 SUPERFAMILY SSF52467 180 342 2.41E-59 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 PANTHER PTHR18968:SF116 1 545 9.5E-268 T 22-04-2016 APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 Gene3D G3DSA:3.40.50.1220 183 334 2.1E-59 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 1.0E-42 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 1.5E-217 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 PANTHER PTHR18968 1 545 9.5E-268 T 22-04-2016 APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 8.9E-50 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 Gene3D G3DSA:3.40.50.970 335 537 1.9E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 SUPERFAMILY SSF52518 357 546 1.79E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 Gene3D G3DSA:3.40.50.970 1 171 8.6E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS21470 9d339a4c6457d297aa31b4cc9c3d8a70 548 SUPERFAMILY SSF52518 1 174 4.8E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 Gene3D G3DSA:3.40.50.1820 11 253 1.4E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 Pfam PF00561 alpha/beta hydrolase fold 14 116 2.2E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 SUPERFAMILY SSF53474 9 253 1.9E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 PANTHER PTHR10992 12 257 1.3E-36 T 22-04-2016 APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 257 2.7E-123 T 22-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 258 50.875 T 22-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 7.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 7.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 7.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS05105 43e6503b1c6500d15efe6a8f249b3060 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 7.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 Pfam PF08279 HTH domain 9 58 9.0E-13 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.846 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 SUPERFAMILY SSF50037 271 317 7.32E-11 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 Gene3D G3DSA:3.30.930.10 76 269 4.1E-58 T 22-04-2016 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 4.3E-87 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 76 3.7E-30 T 22-04-2016 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 Gene3D G3DSA:1.10.10.10 1 63 9.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 Gene3D G3DSA:2.30.30.100 271 320 2.8E-24 T 22-04-2016 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 PANTHER PTHR12835 8 317 4.6E-98 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 SUPERFAMILY SSF46785 3 60 5.56E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 SUPERFAMILY SSF55681 71 268 1.99E-58 T 22-04-2016 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 7.3E-26 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APECO1_RS22675 2d0dbde9a101ab99ac3d0927cb40104c 321 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 1.2E-11 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 APECO1_RS23700 d6fa1d9357f3f44e64280beda86a5daa 159 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 62 159 2.0E-54 T 22-04-2016 IPR004914 Antirestriction protein APECO1_RS23700 d6fa1d9357f3f44e64280beda86a5daa 159 Pfam PF03230 Antirestriction protein 64 159 8.1E-37 T 22-04-2016 IPR004914 Antirestriction protein APECO1_RS18980 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.049 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APECO1_RS18980 f3f9af9f0f3baa9ec3319b1573a90dfc 59 PANTHER PTHR15892 1 59 2.9E-30 T 22-04-2016 APECO1_RS18980 f3f9af9f0f3baa9ec3319b1573a90dfc 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site APECO1_RS18980 f3f9af9f0f3baa9ec3319b1573a90dfc 59 SUPERFAMILY SSF55129 3 59 3.01E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APECO1_RS18980 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 2.9E-19 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APECO1_RS18980 f3f9af9f0f3baa9ec3319b1573a90dfc 59 Gene3D G3DSA:3.30.1390.20 2 59 1.7E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APECO1_RS18980 f3f9af9f0f3baa9ec3319b1573a90dfc 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.6E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APECO1_RS18980 f3f9af9f0f3baa9ec3319b1573a90dfc 59 PIRSF PIRSF002211 1 59 6.5E-30 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 98 120 1.2E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 24 40 1.2E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 153 175 1.2E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 53 71 1.2E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 1.2E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 268 287 1.2E-72 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 SUPERFAMILY SSF56935 24 360 5.23E-86 T 22-04-2016 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 Gene3D G3DSA:2.40.160.10 24 360 2.3E-107 T 22-04-2016 IPR023614 Porin domain APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 Pfam PF00267 Gram-negative porin 29 360 1.5E-152 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 8.8E-20 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 312 329 8.8E-20 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 8.8E-20 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 98 108 8.8E-20 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 8.8E-20 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PANTHER PTHR34501:SF4 3 360 1.6E-210 T 22-04-2016 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 PANTHER PTHR34501 3 360 1.6E-210 T 22-04-2016 APECO1_RS05920 7a4b31156365aa0ff2b630ecd446bcc2 360 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 312 328 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site APECO1_RS18170 12c579e4238281525534c0ae7e2b5057 237 PANTHER PTHR11280:SF5 1 233 3.8E-71 T 22-04-2016 APECO1_RS18170 12c579e4238281525534c0ae7e2b5057 237 Gene3D G3DSA:3.40.50.1360 4 233 1.5E-63 T 22-04-2016 APECO1_RS18170 12c579e4238281525534c0ae7e2b5057 237 SUPERFAMILY SSF100950 5 235 1.84E-59 T 22-04-2016 APECO1_RS18170 12c579e4238281525534c0ae7e2b5057 237 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APECO1_RS18170 12c579e4238281525534c0ae7e2b5057 237 PANTHER PTHR11280 1 233 3.8E-71 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APECO1_RS18170 12c579e4238281525534c0ae7e2b5057 237 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 221 2.5E-19 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 Gene3D G3DSA:3.30.1240.10 84 178 3.9E-33 T 22-04-2016 APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 9.1E-20 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 1.4E-57 T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 SUPERFAMILY SSF56784 1 264 4.07E-63 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.3E-54 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 Gene3D G3DSA:3.40.50.1000 179 265 5.4E-47 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 Gene3D G3DSA:3.40.50.1000 1 74 5.4E-47 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 22-04-2016 APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 PANTHER PTHR10000 1 265 3.9E-128 T 22-04-2016 APECO1_RS04100 3571509a251de50a8c113ed4d69b1a78 271 PANTHER PTHR10000:SF27 1 265 3.9E-128 T 22-04-2016 APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 Gene3D G3DSA:2.140.10.10 568 793 5.6E-164 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 Gene3D G3DSA:2.140.10.10 159 533 5.6E-164 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 SUPERFAMILY SSF50998 161 521 7.98E-158 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 SUPERFAMILY SSF50998 557 792 7.98E-158 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 404 425 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 SMART SM00564 339 380 0.16 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 SMART SM00564 715 748 0.04 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 SMART SM00564 401 458 310.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 SMART SM00564 282 314 210.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 SMART SM00564 220 251 2.4E-6 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 SMART SM00564 479 512 550.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 PANTHER PTHR32303 576 795 0.0 T 22-04-2016 APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 PANTHER PTHR32303 129 507 0.0 T 22-04-2016 APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 PANTHER PTHR32303:SF4 576 795 0.0 T 22-04-2016 APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 PANTHER PTHR32303:SF4 129 507 0.0 T 22-04-2016 APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 792 0.0 T 22-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 Pfam PF01011 PQQ enzyme repeat 721 758 5.1E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 Pfam PF01011 PQQ enzyme repeat 442 468 9.2E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 Pfam PF01011 PQQ enzyme repeat 357 387 2.4E-5 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 Pfam PF01011 PQQ enzyme repeat 225 258 6.6E-8 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 Pfam PF01011 PQQ enzyme repeat 664 696 2.0E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 Pfam PF01011 PQQ enzyme repeat 289 321 3.8E-4 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APECO1_RS00680 a6bed67086d8a236506857c6f212d1bf 796 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 167 195 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APECO1_RS11830 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 1.6E-101 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APECO1_RS11830 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 PANTHER PTHR23264:SF19 7 367 1.6E-201 T 22-04-2016 APECO1_RS11830 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 SUPERFAMILY SSF117916 15 85 1.05E-5 T 22-04-2016 APECO1_RS11830 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 PANTHER PTHR23264 7 367 1.6E-201 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APECO1_RS11830 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 SUPERFAMILY SSF52540 108 355 1.89E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11830 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 37.76 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APECO1_RS11830 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 APECO1_RS11830 3a5efd80dc8fbaa7a0757ad4a1d6d1d5 369 Gene3D G3DSA:3.40.50.300 97 349 1.2E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 Pfam PF01316 Arginine repressor, DNA binding domain 5 74 1.8E-26 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.29E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.29E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.29E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.29E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 PANTHER PTHR34471 2 156 4.2E-69 T 22-04-2016 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 SUPERFAMILY SSF55252 82 151 4.45E-20 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 61.452 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 SUPERFAMILY SSF46785 3 77 1.81E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 4.7E-23 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 152 3.3E-49 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 Gene3D G3DSA:3.30.1360.40 80 154 1.6E-27 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 Gene3D G3DSA:1.10.10.10 2 77 1.9E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 3.0E-31 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APECO1_RS18595 e663300a64090f6c6d262c2c5a29ab77 156 PANTHER PTHR34471:SF1 2 156 4.2E-69 T 22-04-2016 APECO1_RS17485 22ed00c04e2cf228cc5044dc8abb3b9a 387 Gene3D G3DSA:1.20.1090.10 185 386 5.3E-56 T 22-04-2016 APECO1_RS17485 22ed00c04e2cf228cc5044dc8abb3b9a 387 PANTHER PTHR11496 1 387 2.2E-246 T 22-04-2016 APECO1_RS17485 22ed00c04e2cf228cc5044dc8abb3b9a 387 SUPERFAMILY SSF56796 1 385 2.62E-108 T 22-04-2016 APECO1_RS17485 22ed00c04e2cf228cc5044dc8abb3b9a 387 PANTHER PTHR11496:SF65 1 387 2.2E-246 T 22-04-2016 APECO1_RS17485 22ed00c04e2cf228cc5044dc8abb3b9a 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 2.7E-92 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS17485 22ed00c04e2cf228cc5044dc8abb3b9a 387 Gene3D G3DSA:3.40.50.1970 1 184 6.2E-56 T 22-04-2016 APECO1_RS17485 22ed00c04e2cf228cc5044dc8abb3b9a 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS17485 22ed00c04e2cf228cc5044dc8abb3b9a 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS03090 e1cf7bcdabbdf66cf859974522a5a4b9 155 PANTHER PTHR33603:SF1 1 154 4.7E-70 T 22-04-2016 APECO1_RS03090 e1cf7bcdabbdf66cf859974522a5a4b9 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 2.9E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS03090 e1cf7bcdabbdf66cf859974522a5a4b9 155 Gene3D G3DSA:3.40.1280.10 2 154 5.5E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APECO1_RS03090 e1cf7bcdabbdf66cf859974522a5a4b9 155 PANTHER PTHR33603 1 154 4.7E-70 T 22-04-2016 APECO1_RS03090 e1cf7bcdabbdf66cf859974522a5a4b9 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.079 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS03090 e1cf7bcdabbdf66cf859974522a5a4b9 155 SUPERFAMILY SSF75217 2 153 3.51E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APECO1_RS03090 e1cf7bcdabbdf66cf859974522a5a4b9 155 PIRSF PIRSF004505 1 154 6.1E-40 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS03090 e1cf7bcdabbdf66cf859974522a5a4b9 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 1.7E-87 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS00875 4ddf5054a88b91559aee6478ea4a0b69 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 2.9E-57 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 APECO1_RS00875 4ddf5054a88b91559aee6478ea4a0b69 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.845 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 APECO1_RS00875 4ddf5054a88b91559aee6478ea4a0b69 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 2.0E-67 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 APECO1_RS15835 de996b9b28279ad7116ea1f1e10cfa28 109 SUPERFAMILY SSF158452 1 107 3.53E-36 T 22-04-2016 IPR023376 YqcC-like domain APECO1_RS15835 de996b9b28279ad7116ea1f1e10cfa28 109 Gene3D G3DSA:1.20.1440.40 1 104 2.4E-41 T 22-04-2016 IPR023376 YqcC-like domain APECO1_RS15835 de996b9b28279ad7116ea1f1e10cfa28 109 PIRSF PIRSF006257 1 108 5.0E-41 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 APECO1_RS15835 de996b9b28279ad7116ea1f1e10cfa28 109 Pfam PF04287 tRNA pseudouridine synthase C 7 103 7.2E-33 T 22-04-2016 IPR023376 YqcC-like domain APECO1_RS15835 de996b9b28279ad7116ea1f1e10cfa28 109 PANTHER PTHR39586 2 109 5.6E-46 T 22-04-2016 APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 SUPERFAMILY SSF53597 1 159 1.07E-55 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 PIRSF PIRSF000194 1 159 5.7E-57 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 PANTHER PTHR22778:SF16 1 159 1.6E-48 T 22-04-2016 APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 PANTHER PTHR22778 1 159 1.6E-48 T 22-04-2016 APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 8.5E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 8.5E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 8.5E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 8.5E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 Gene3D G3DSA:3.40.430.10 1 159 4.4E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 Pfam PF00186 Dihydrofolate reductase 1 158 3.4E-58 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APECO1_RS00270 ce7c49af8b85e648e2e76cb6d1771f09 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 PRINTS PR00147 DNA photolyase signature 342 360 1.6E-32 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 PRINTS PR00147 DNA photolyase signature 381 395 1.6E-32 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 PRINTS PR00147 DNA photolyase signature 322 338 1.6E-32 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 PRINTS PR00147 DNA photolyase signature 143 159 1.6E-32 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 342 361 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 Gene3D G3DSA:3.40.50.620 2 147 3.0E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 Gene3D G3DSA:1.10.579.10 284 469 1.7E-81 T 22-04-2016 APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 PANTHER PTHR11455:SF18 1 470 3.2E-213 T 22-04-2016 APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 Pfam PF00875 DNA photolyase 5 168 7.9E-45 T 22-04-2016 IPR006050 DNA photolyase, N-terminal APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 SUPERFAMILY SSF48173 192 470 1.44E-108 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 SUPERFAMILY SSF52425 3 198 3.79E-52 T 22-04-2016 IPR006050 DNA photolyase, N-terminal APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 PANTHER PTHR11455 1 470 3.2E-213 T 22-04-2016 APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 Gene3D G3DSA:1.25.40.80 148 283 1.5E-42 T 22-04-2016 APECO1_RS03415 391d0e9e95c66c3889a7a01be9d0b7b2 472 Pfam PF03441 FAD binding domain of DNA photolyase 272 466 6.5E-86 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain APECO1_RS03545 95d6b9a5e688947f79739e307a1680a9 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 1.2E-50 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APECO1_RS03545 95d6b9a5e688947f79739e307a1680a9 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 22-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 APECO1_RS03545 95d6b9a5e688947f79739e307a1680a9 134 Pfam PF03061 Thioesterase superfamily 20 103 2.1E-18 T 22-04-2016 IPR006683 Thioesterase domain APECO1_RS03545 95d6b9a5e688947f79739e307a1680a9 134 PIRSF PIRSF003230 1 134 1.5E-50 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APECO1_RS03545 95d6b9a5e688947f79739e307a1680a9 134 SUPERFAMILY SSF54637 4 133 2.24E-40 T 22-04-2016 IPR029069 HotDog domain APECO1_RS03545 95d6b9a5e688947f79739e307a1680a9 134 Gene3D G3DSA:3.10.129.10 4 133 1.0E-48 T 22-04-2016 IPR029069 HotDog domain APECO1_RS03545 95d6b9a5e688947f79739e307a1680a9 134 PANTHER PTHR31793 6 134 6.4E-52 T 22-04-2016 APECO1_RS03545 95d6b9a5e688947f79739e307a1680a9 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 1.4E-51 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- APECO1_RS03545 95d6b9a5e688947f79739e307a1680a9 134 PANTHER PTHR31793:SF9 6 134 6.4E-52 T 22-04-2016 APECO1_RS15365 4ecbb5b02aeade50c2073131b3b3deea 166 Hamap MF_01114 Regulatory protein RecX [recX]. 6 166 13.467 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APECO1_RS15365 4ecbb5b02aeade50c2073131b3b3deea 166 PANTHER PTHR33602 10 166 1.4E-49 T 22-04-2016 APECO1_RS15365 4ecbb5b02aeade50c2073131b3b3deea 166 Gene3D G3DSA:1.10.10.10 116 165 1.9E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15365 4ecbb5b02aeade50c2073131b3b3deea 166 PANTHER PTHR33602:SF1 10 166 1.4E-49 T 22-04-2016 APECO1_RS15365 4ecbb5b02aeade50c2073131b3b3deea 166 Pfam PF02631 RecX family 50 162 2.8E-30 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APECO1_RS15365 4ecbb5b02aeade50c2073131b3b3deea 166 Gene3D G3DSA:1.10.10.10 70 115 4.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15365 4ecbb5b02aeade50c2073131b3b3deea 166 Gene3D G3DSA:1.10.10.10 13 69 1.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:2.60.34.10 390 531 1.0E-70 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.30.30 53 108 1.7E-28 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF100934 507 602 6.54E-31 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF53067 4 183 3.56E-66 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.01E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.01E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 6.01E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 6.01E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.01E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.01E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 6.01E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 6.01E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 6.01E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF100920 384 539 1.29E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PANTHER PTHR19375 2 638 0.0 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 319 361 8.5E-34 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 197 229 8.5E-34 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:1.20.1270.10 532 601 1.1E-28 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 6.3E-294 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 PANTHER PTHR19375:SF173 2 638 0.0 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 4 52 1.2E-63 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.30.420.40 119 196 1.2E-63 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Gene3D G3DSA:3.90.640.10 230 315 5.3E-32 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Pfam PF00012 Hsp70 protein 4 602 2.6E-270 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.27 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 SUPERFAMILY SSF53067 187 382 5.12E-69 T 22-04-2016 APECO1_RS00075 0d39280bf6256e4ebfb5b40449c56b29 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APECO1_RS05535 679c1ae1c1b72d8bbfa3789039d7d55e 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 337 1.7E-158 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APECO1_RS05535 679c1ae1c1b72d8bbfa3789039d7d55e 340 Gene3D G3DSA:3.30.160.60 71 109 2.2E-23 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APECO1_RS05535 679c1ae1c1b72d8bbfa3789039d7d55e 340 PANTHER PTHR30518 3 340 4.4E-99 T 22-04-2016 APECO1_RS05535 679c1ae1c1b72d8bbfa3789039d7d55e 340 Gene3D G3DSA:3.30.160.60 303 339 7.6E-18 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APECO1_RS05535 679c1ae1c1b72d8bbfa3789039d7d55e 340 Pfam PF02618 YceG-like family 43 328 5.7E-78 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APECO1_RS05535 679c1ae1c1b72d8bbfa3789039d7d55e 340 PANTHER PTHR30518:SF2 3 340 4.4E-99 T 22-04-2016 APECO1_RS06660 beb873568a9148ffe1d6fa1d6217142b 82 SUPERFAMILY SSF46955 4 78 4.58E-21 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS06660 beb873568a9148ffe1d6fa1d6217142b 82 Gene3D G3DSA:1.10.1660.20 4 78 5.0E-20 T 22-04-2016 IPR012884 Excisionase-like GO:0003677|GO:0006310 APECO1_RS06660 beb873568a9148ffe1d6fa1d6217142b 82 Pfam PF07825 Excisionase-like protein 6 74 8.3E-8 T 22-04-2016 IPR012884 Excisionase-like GO:0003677|GO:0006310 APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 9.0E-42 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 Gene3D G3DSA:3.40.50.970 1 172 2.2E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 2.3E-40 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 PANTHER PTHR18968:SF12 1 572 0.0 T 22-04-2016 APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 Gene3D G3DSA:3.40.50.1220 185 341 1.1E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 Gene3D G3DSA:3.40.50.970 350 550 4.3E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 SUPERFAMILY SSF52467 182 352 5.06E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 SUPERFAMILY SSF52518 357 557 7.37E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 SUPERFAMILY SSF52518 2 173 6.1E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 1.8E-29 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APECO1_RS04240 925a39570d4470f667a51c5a4fd4ecf8 572 PANTHER PTHR18968 1 572 0.0 T 22-04-2016 APECO1_RS22430 621715efc1b994905c34b1a9053955c6 284 Pfam PF05036 Sporulation related domain 211 278 1.1E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APECO1_RS22430 621715efc1b994905c34b1a9053955c6 284 Gene3D G3DSA:3.30.70.1070 206 281 2.9E-32 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APECO1_RS22430 621715efc1b994905c34b1a9053955c6 284 PANTHER PTHR11064 45 284 5.5E-120 T 22-04-2016 APECO1_RS22430 621715efc1b994905c34b1a9053955c6 284 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 1 280 5.6E-107 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 APECO1_RS22430 621715efc1b994905c34b1a9053955c6 284 Hamap MF_02039 Cell division protein FtsN [ftsN]. 1 284 34.534 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 APECO1_RS22430 621715efc1b994905c34b1a9053955c6 284 SUPERFAMILY SSF110997 209 279 3.01E-20 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APECO1_RS22430 621715efc1b994905c34b1a9053955c6 284 PANTHER PTHR11064:SF39 45 284 5.5E-120 T 22-04-2016 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 Gene3D G3DSA:3.30.70.141 1 140 1.5E-58 T 22-04-2016 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 7.1E-54 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 PANTHER PTHR11349 1 143 5.4E-77 T 22-04-2016 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 SUPERFAMILY SSF54919 1 141 3.8E-58 T 22-04-2016 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.662 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.51E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.51E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.51E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.51E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.51E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS14290 73cf79dad8bc21fd8c65de28036a0ca3 143 SMART SM00562 3 140 5.3E-86 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.5E-44 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 SUPERFAMILY SSF53671 4 333 4.45E-98 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 Gene3D G3DSA:3.40.50.1370 145 319 8.1E-72 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 2.6E-132 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 Gene3D G3DSA:3.40.50.1370 4 144 2.7E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PANTHER PTHR11405 1 277 1.2E-204 T 22-04-2016 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PANTHER PTHR11405 297 334 1.2E-204 T 22-04-2016 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 81.586 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PANTHER PTHR11405:SF44 1 277 1.2E-204 T 22-04-2016 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PANTHER PTHR11405:SF44 297 334 1.2E-204 T 22-04-2016 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.5E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.5E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.5E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 2.5E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 330 1.2E-54 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APECO1_RS24675 bc52adc5a99fdb244179528f4c52f186 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS10035 0dece7d6f5b0a1d1c2b628ee28505253 248 PANTHER PTHR12598 1 244 1.1E-105 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 APECO1_RS10035 0dece7d6f5b0a1d1c2b628ee28505253 248 Gene3D G3DSA:3.20.20.380 1 244 1.1E-93 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 APECO1_RS10035 0dece7d6f5b0a1d1c2b628ee28505253 248 PANTHER PTHR12598:SF0 1 244 1.1E-105 T 22-04-2016 APECO1_RS10035 0dece7d6f5b0a1d1c2b628ee28505253 248 Pfam PF03932 CutC family 3 200 3.8E-85 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 APECO1_RS10035 0dece7d6f5b0a1d1c2b628ee28505253 248 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 38.919 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 APECO1_RS10035 0dece7d6f5b0a1d1c2b628ee28505253 248 SUPERFAMILY SSF110395 3 245 8.11E-77 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 Gene3D G3DSA:1.10.274.10 270 374 1.0E-30 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 Gene3D G3DSA:3.40.50.510 1 132 1.9E-46 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 Pfam PF00381 PTS HPr component phosphorylation site 159 236 2.3E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 PRINTS PR00107 Phosphocarrier protein signature 192 207 2.9E-6 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 PRINTS PR00107 Phosphocarrier protein signature 167 183 2.9E-6 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 PRINTS PR00107 Phosphocarrier protein signature 207 224 2.9E-6 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 167 174 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 Gene3D G3DSA:3.50.30.10 375 465 4.5E-18 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 SUPERFAMILY SSF55594 158 241 3.14E-19 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 SUPERFAMILY SSF47831 276 384 3.79E-26 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 Pfam PF00391 PEP-utilising enzyme, mobile domain 393 464 1.1E-13 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 SUPERFAMILY SSF53062 1 127 5.36E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 Pfam PF03610 PTS system fructose IIA component 4 120 7.9E-28 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 PANTHER PTHR22931:SF28 232 462 5.1E-63 T 22-04-2016 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 159 234 7.7E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 SUPERFAMILY SSF52009 355 463 7.19E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 PANTHER PTHR22931 232 462 5.1E-63 T 22-04-2016 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 Pfam PF05524 PEP-utilising enzyme, N-terminal 258 368 1.7E-20 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 Gene3D G3DSA:3.30.1340.10 158 241 1.1E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS06350 1c177f3af401faad7a703dd4501835cd 472 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 127 4.0E-41 T 22-04-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain APECO1_RS02585 5d647070d394f1771dfa54754d376ee3 258 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 3 255 6.2E-126 T 22-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 APECO1_RS02585 5d647070d394f1771dfa54754d376ee3 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 7.8E-33 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS02585 5d647070d394f1771dfa54754d376ee3 258 PANTHER PTHR12110:SF3 1 257 8.9E-110 T 22-04-2016 APECO1_RS02585 5d647070d394f1771dfa54754d376ee3 258 PIRSF PIRSF006241 1 258 1.2E-97 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 APECO1_RS02585 5d647070d394f1771dfa54754d376ee3 258 Gene3D G3DSA:3.20.20.150 1 257 9.2E-89 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS02585 5d647070d394f1771dfa54754d376ee3 258 PANTHER PTHR12110 1 257 8.9E-110 T 22-04-2016 APECO1_RS02585 5d647070d394f1771dfa54754d376ee3 258 SUPERFAMILY SSF51658 1 257 3.32E-83 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 Pfam PF09382 RQC domain 406 514 5.1E-35 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 Gene3D G3DSA:3.40.50.300 6 202 2.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 SMART SM00490 250 331 8.1E-29 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 Pfam PF00570 HRDC domain 533 599 3.4E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 Gene3D G3DSA:3.40.50.300 206 344 4.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 SMART SM00487 22 216 2.2E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 SMART SM00341 529 609 1.9E-31 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 Pfam PF00271 Helicase conserved C-terminal domain 224 331 1.2E-20 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 SUPERFAMILY SSF47819 530 605 3.27E-26 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 Pfam PF00270 DEAD/DEAH box helicase 28 187 1.9E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 601 4.8E-281 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 PANTHER PTHR13710 13 609 0.0 T 22-04-2016 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 Gene3D G3DSA:1.10.10.10 345 515 6.2E-61 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 Pfam PF16124 RecQ zinc-binding 343 404 9.7E-16 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 Gene3D G3DSA:1.10.150.80 530 601 5.3E-24 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 SMART SM00956 411 514 4.9E-48 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 3.5E-210 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 PANTHER PTHR13710:SF81 13 609 0.0 T 22-04-2016 APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 SUPERFAMILY SSF52540 7 201 2.03E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21755 823091b7dab72b46d3249d725a3e98c4 609 SUPERFAMILY SSF52540 208 456 1.83E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 614 2.3E-272 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 Pfam PF00593 TonB dependent receptor 390 613 4.3E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 PANTHER PTHR30069:SF10 1 597 0.0 T 22-04-2016 APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 146 1.0E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 Gene3D G3DSA:2.40.170.20 152 614 2.5E-100 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 614 35.936 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 Gene3D G3DSA:2.170.130.10 20 151 7.3E-42 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 SUPERFAMILY SSF56935 26 614 1.2E-126 T 22-04-2016 APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 33 - T 22-04-2016 IPR010916 TonB box, conserved site APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 PANTHER PTHR30069 1 597 0.0 T 22-04-2016 APECO1_RS22640 c27179c76a3c1ebce350d855643972ce 614 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 597 614 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APECO1_RS11750 5ec0531d7ce36b205d0fff43e75cb417 425 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 4.8E-197 T 22-04-2016 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 APECO1_RS11750 5ec0531d7ce36b205d0fff43e75cb417 425 Gene3D G3DSA:1.20.1250.20 5 189 1.4E-14 T 22-04-2016 APECO1_RS11750 5ec0531d7ce36b205d0fff43e75cb417 425 PANTHER PTHR23522:SF1 1 418 6.9E-292 T 22-04-2016 APECO1_RS11750 5ec0531d7ce36b205d0fff43e75cb417 425 PANTHER PTHR23522 1 418 6.9E-292 T 22-04-2016 APECO1_RS11750 5ec0531d7ce36b205d0fff43e75cb417 425 SUPERFAMILY SSF103473 6 404 3.53E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS11750 5ec0531d7ce36b205d0fff43e75cb417 425 Gene3D G3DSA:1.20.1250.20 202 406 1.1E-24 T 22-04-2016 APECO1_RS11750 5ec0531d7ce36b205d0fff43e75cb417 425 Pfam PF03825 Nucleoside H+ symporter 1 405 3.0E-185 T 22-04-2016 APECO1_RS12165 ec88c82ec1b2415c56515500d58b67d4 518 PANTHER PTHR33121 201 513 3.8E-148 T 22-04-2016 APECO1_RS12165 ec88c82ec1b2415c56515500d58b67d4 518 Pfam PF00563 EAL domain 267 500 6.5E-67 T 22-04-2016 IPR001633 EAL domain APECO1_RS12165 ec88c82ec1b2415c56515500d58b67d4 518 Gene3D G3DSA:3.20.20.450 267 512 2.4E-76 T 22-04-2016 IPR001633 EAL domain APECO1_RS12165 ec88c82ec1b2415c56515500d58b67d4 518 SMART SM00052 260 505 2.2E-106 T 22-04-2016 IPR001633 EAL domain APECO1_RS12165 ec88c82ec1b2415c56515500d58b67d4 518 PANTHER PTHR33121:SF1 201 513 3.8E-148 T 22-04-2016 APECO1_RS12165 ec88c82ec1b2415c56515500d58b67d4 518 SUPERFAMILY SSF141868 267 514 1.09E-72 T 22-04-2016 IPR001633 EAL domain APECO1_RS12165 ec88c82ec1b2415c56515500d58b67d4 518 Pfam PF12792 CSS motif domain associated with EAL 42 239 1.7E-42 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 SUPERFAMILY SSF54197 179 345 4.59E-59 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 4.5E-70 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 347 3.2E-214 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 PANTHER PTHR11943 3 345 1.7E-216 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 PIRSF PIRSF000808 1 341 4.2E-129 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 1.9E-72 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 22-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 PANTHER PTHR11943:SF2 3 345 1.7E-216 T 22-04-2016 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 Gene3D G3DSA:3.30.428.10 176 345 4.4E-80 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 Gene3D G3DSA:3.30.428.10 45 175 1.9E-57 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APECO1_RS03660 5c3eb292572acb1f2a1370d6d3218fc0 348 SUPERFAMILY SSF54197 3 177 1.87E-73 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 SUPERFAMILY SSF55594 4 90 3.66E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.0E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 2.6E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 3.3E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 3.3E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 3.3E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 PANTHER PTHR33705:SF2 1 90 1.5E-39 T 22-04-2016 APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 Gene3D G3DSA:3.30.1340.10 3 89 1.6E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS18480 f957fc3f45621e04f1c53152aea9a048 90 PANTHER PTHR33705 1 90 1.5E-39 T 22-04-2016 APECO1_RS10130 48f8caa0a1843b17b44e9938797f744f 474 PANTHER PTHR10788:SF6 1 473 1.5E-204 T 22-04-2016 APECO1_RS10130 48f8caa0a1843b17b44e9938797f744f 474 Gene3D G3DSA:3.40.50.2000 244 435 1.4E-75 T 22-04-2016 APECO1_RS10130 48f8caa0a1843b17b44e9938797f744f 474 PANTHER PTHR10788 1 473 1.5E-204 T 22-04-2016 APECO1_RS10130 48f8caa0a1843b17b44e9938797f744f 474 Gene3D G3DSA:3.40.50.2000 1 239 1.9E-74 T 22-04-2016 APECO1_RS10130 48f8caa0a1843b17b44e9938797f744f 474 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 7.4E-184 T 22-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 APECO1_RS10130 48f8caa0a1843b17b44e9938797f744f 474 SUPERFAMILY SSF53756 2 455 8.37E-148 T 22-04-2016 APECO1_RS10130 48f8caa0a1843b17b44e9938797f744f 474 Pfam PF00982 Glycosyltransferase family 20 17 452 5.2E-152 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 Pfam PF04408 Helicase associated domain (HA2) 466 557 4.5E-17 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 Pfam PF00270 DEAD/DEAH box helicase 85 233 6.9E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 Pfam PF00271 Helicase conserved C-terminal domain 284 403 7.9E-11 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 PANTHER PTHR18934:SF109 739 867 0.0 T 22-04-2016 APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 PANTHER PTHR18934:SF109 76 702 0.0 T 22-04-2016 APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 Gene3D G3DSA:3.40.50.300 493 612 1.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 PANTHER PTHR18934 739 867 0.0 T 22-04-2016 APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 PANTHER PTHR18934 76 702 0.0 T 22-04-2016 APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 Pfam PF11898 Domain of unknown function (DUF3418) 713 1297 4.7E-237 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 SMART SM00382 92 384 6.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 SUPERFAMILY SSF52540 74 601 1.66E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 SMART SM00487 75 259 5.0E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 Gene3D G3DSA:3.40.50.300 77 233 3.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 SMART SM00847 464 559 1.1E-37 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 SMART SM00490 304 404 1.0E-15 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 Gene3D G3DSA:3.40.50.300 271 416 6.3E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 596 698 1.1E-16 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 APECO1_RS07875 4168eacb90d078f8496126128e017f30 1300 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1297 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 APECO1_RS12825 eaf429c619b69cdbf7be347b93774a4a 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 219 4.2E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12825 eaf429c619b69cdbf7be347b93774a4a 228 PANTHER PTHR30133 1 228 2.4E-180 T 22-04-2016 APECO1_RS12825 eaf429c619b69cdbf7be347b93774a4a 228 Gene3D G3DSA:1.10.3720.10 8 219 8.2E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12825 eaf429c619b69cdbf7be347b93774a4a 228 PANTHER PTHR30133:SF1 1 228 2.4E-180 T 22-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 APECO1_RS12825 eaf429c619b69cdbf7be347b93774a4a 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 114 7.9E-19 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS12825 eaf429c619b69cdbf7be347b93774a4a 228 SUPERFAMILY SSF161098 7 205 1.05E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 Gene3D G3DSA:1.10.10.60 192 243 8.2E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 PANTHER PTHR11019 25 298 1.6E-138 T 22-04-2016 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 SUPERFAMILY SSF46689 243 291 8.51E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 PANTHER PTHR11019:SF136 25 298 1.6E-138 T 22-04-2016 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 SUPERFAMILY SSF51182 36 138 5.82E-7 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 SMART SM00342 207 290 1.1E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 1.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 1.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 Gene3D G3DSA:1.10.10.60 244 292 4.3E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 Pfam PF12833 Helix-turn-helix domain 214 291 8.1E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 Gene3D G3DSA:2.60.120.10 35 96 2.6E-6 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS23570 186e4454175126201ac1f0c88bca4abb 302 SUPERFAMILY SSF47454 129 186 2.59E-11 T 22-04-2016 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 APECO1_RS16475 458126aff345fb83de67aa449876a754 129 Gene3D G3DSA:2.40.50.100 7 128 2.8E-52 T 22-04-2016 APECO1_RS16475 458126aff345fb83de67aa449876a754 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 32.475 T 22-04-2016 IPR002930 Glycine cleavage system H-protein APECO1_RS16475 458126aff345fb83de67aa449876a754 129 PANTHER PTHR11715 1 129 5.6E-77 T 22-04-2016 IPR002930 Glycine cleavage system H-protein APECO1_RS16475 458126aff345fb83de67aa449876a754 129 SUPERFAMILY SSF51230 3 128 2.05E-46 T 22-04-2016 IPR011053 Single hybrid motif APECO1_RS16475 458126aff345fb83de67aa449876a754 129 PANTHER PTHR11715:SF12 1 129 5.6E-77 T 22-04-2016 APECO1_RS16475 458126aff345fb83de67aa449876a754 129 Pfam PF01597 Glycine cleavage H-protein 8 128 2.8E-50 T 22-04-2016 IPR002930 Glycine cleavage system H-protein APECO1_RS16475 458126aff345fb83de67aa449876a754 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 2.3E-61 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 APECO1_RS16475 458126aff345fb83de67aa449876a754 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 SUPERFAMILY SSF52540 77 348 1.44E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 57.065 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 SUPERFAMILY SSF47917 345 459 2.07E-55 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 SMART SM00382 142 327 4.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 SUPERFAMILY SSF50615 3 75 1.99E-24 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 PANTHER PTHR15184 1 460 0.0 T 22-04-2016 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 Gene3D G3DSA:1.10.1140.10 345 460 4.1E-58 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 Gene3D G3DSA:3.40.50.300 77 343 3.7E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 Gene3D G3DSA:2.40.10.170 2 75 2.0E-30 T 22-04-2016 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 2.3E-264 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 PANTHER PTHR15184:SF44 1 460 0.0 T 22-04-2016 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.6E-64 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21300 87a0407f808f3b21b2ac263219666221 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 1.9E-20 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS07145 843a346245dc04d884abeb55c16b19d1 375 SUPERFAMILY SSF69118 266 373 5.47E-12 T 22-04-2016 IPR029032 AhpD-like APECO1_RS07145 843a346245dc04d884abeb55c16b19d1 375 Gene3D G3DSA:1.20.1290.10 267 374 8.1E-22 T 22-04-2016 IPR029032 AhpD-like APECO1_RS07145 843a346245dc04d884abeb55c16b19d1 375 Gene3D G3DSA:1.20.1290.10 80 191 7.5E-13 T 22-04-2016 IPR029032 AhpD-like APECO1_RS07145 843a346245dc04d884abeb55c16b19d1 375 SUPERFAMILY SSF69118 76 187 2.85E-9 T 22-04-2016 IPR029032 AhpD-like APECO1_RS18505 a80c776a6507cce3be4b94f201b314bb 309 PANTHER PTHR11135 1 291 1.6E-150 T 22-04-2016 APECO1_RS18505 a80c776a6507cce3be4b94f201b314bb 309 PANTHER PTHR11135:SF1 1 291 1.6E-150 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 APECO1_RS18505 a80c776a6507cce3be4b94f201b314bb 309 SUPERFAMILY SSF102114 13 254 1.31E-45 T 22-04-2016 APECO1_RS18505 a80c776a6507cce3be4b94f201b314bb 309 Pfam PF04055 Radical SAM superfamily 43 202 1.1E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS18505 a80c776a6507cce3be4b94f201b314bb 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 1.9E-142 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 APECO1_RS18505 a80c776a6507cce3be4b94f201b314bb 309 Gene3D G3DSA:3.80.30.20 22 231 2.7E-34 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APECO1_RS18505 a80c776a6507cce3be4b94f201b314bb 309 SMART SM00729 23 247 4.9E-43 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS18505 a80c776a6507cce3be4b94f201b314bb 309 Pfam PF16199 Radical_SAM C-terminal domain 208 283 2.9E-17 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension APECO1_RS20345 8c227195c3a24c508cc60520dd208e31 563 PANTHER PTHR30443 1 563 0.0 T 22-04-2016 APECO1_RS20345 8c227195c3a24c508cc60520dd208e31 563 Pfam PF08019 Domain of unknown function (DUF1705) 57 172 1.4E-18 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 APECO1_RS20345 8c227195c3a24c508cc60520dd208e31 563 SUPERFAMILY SSF53649 250 542 4.49E-20 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS20345 8c227195c3a24c508cc60520dd208e31 563 PANTHER PTHR30443:SF3 1 563 0.0 T 22-04-2016 APECO1_RS20345 8c227195c3a24c508cc60520dd208e31 563 Gene3D G3DSA:3.40.720.10 250 543 3.3E-15 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS20345 8c227195c3a24c508cc60520dd208e31 563 Pfam PF00884 Sulfatase 250 538 3.3E-50 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS25615 a3f6adaf7db1bca1b412eb652d1e22ae 645 Gene3D G3DSA:1.10.1240.20 404 472 4.2E-30 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 APECO1_RS25615 a3f6adaf7db1bca1b412eb652d1e22ae 645 Gene3D G3DSA:1.10.530.10 475 639 2.2E-54 T 22-04-2016 APECO1_RS25615 a3f6adaf7db1bca1b412eb652d1e22ae 645 PANTHER PTHR21666 463 645 1.8E-106 T 22-04-2016 APECO1_RS25615 a3f6adaf7db1bca1b412eb652d1e22ae 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 407 472 4.4E-23 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 APECO1_RS25615 a3f6adaf7db1bca1b412eb652d1e22ae 645 PANTHER PTHR21666:SF184 463 645 1.8E-106 T 22-04-2016 APECO1_RS25615 a3f6adaf7db1bca1b412eb652d1e22ae 645 Pfam PF01464 Transglycosylase SLT domain 483 595 4.1E-34 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APECO1_RS25615 a3f6adaf7db1bca1b412eb652d1e22ae 645 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 501 529 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APECO1_RS25615 a3f6adaf7db1bca1b412eb652d1e22ae 645 Gene3D G3DSA:1.25.20.10 29 389 3.1E-125 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 APECO1_RS05110 f32afda8bbffe3f14c1dd9b290121171 128 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 1.2E-75 T 22-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC APECO1_RS05110 f32afda8bbffe3f14c1dd9b290121171 128 Gene3D G3DSA:3.30.1330.40 3 127 1.4E-32 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APECO1_RS05110 f32afda8bbffe3f14c1dd9b290121171 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 22-04-2016 IPR019897 RidA, conserved site APECO1_RS05110 f32afda8bbffe3f14c1dd9b290121171 128 SUPERFAMILY SSF55298 3 126 3.93E-34 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APECO1_RS05110 f32afda8bbffe3f14c1dd9b290121171 128 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 128 44.886 T 22-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC APECO1_RS05110 f32afda8bbffe3f14c1dd9b290121171 128 Pfam PF01042 Endoribonuclease L-PSP 13 125 1.4E-32 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APECO1_RS05110 f32afda8bbffe3f14c1dd9b290121171 128 PANTHER PTHR11803 5 128 3.7E-33 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 96 167 2.9E-15 T 22-04-2016 APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 6 69 2.5E-9 T 22-04-2016 APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 SUPERFAMILY SSF54862 1 170 4.13E-42 T 22-04-2016 APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 Pfam PF13247 4Fe-4S dicluster domain 55 104 3.3E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 Gene3D G3DSA:3.30.70.20 70 95 6.5E-20 T 22-04-2016 APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 Pfam PF12800 4Fe-4S binding domain 10 22 0.4 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 PANTHER PTHR11938:SF111 1 158 3.6E-80 T 22-04-2016 APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 Pfam PF12798 4Fe-4S binding domain 131 151 0.05 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS15440 cc70f09fe5af29105781fd3a8a15181b 175 PANTHER PTHR11938 1 158 3.6E-80 T 22-04-2016 APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 PANTHER PTHR22769 1 126 5.0E-80 T 22-04-2016 APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 PRINTS PR01401 Mutator MutT protein signature 2 23 3.6E-16 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 PRINTS PR01401 Mutator MutT protein signature 77 90 3.6E-16 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 Pfam PF00293 NUDIX domain 5 125 3.5E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 PANTHER PTHR22769:SF36 1 126 5.0E-80 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 128 4.2E-69 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 SUPERFAMILY SSF55811 1 127 8.39E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS00535 4d9a28bf1f9e2b244d57eafd1bf4545a 132 Gene3D G3DSA:3.90.79.10 3 126 5.7E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 PANTHER PTHR30371 4 258 1.7E-122 T 22-04-2016 APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 ProSitePatterns PS01218 TatC family signature. 154 173 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 6.1E-67 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 1.3E-80 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 243 18.199 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 PANTHER PTHR30371:SF0 4 258 1.7E-122 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.5E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.5E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.5E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APECO1_RS21950 8cc1f795ae368b83b9d7df73e4ac56fd 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.5E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 2.0E-61 T 22-04-2016 IPR022161 DNA helicase IV, N-terminal domain APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 Pfam PF13361 UvrD-like helicase C-terminal domain 546 659 2.2E-13 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 2.7E-44 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 PANTHER PTHR11070:SF26 99 677 0.0 T 22-04-2016 APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 Gene3D G3DSA:3.40.50.300 500 675 4.6E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 Gene3D G3DSA:3.40.50.300 395 492 2.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 Gene3D G3DSA:3.40.50.300 196 329 2.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 SUPERFAMILY SSF52540 195 330 3.43E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 SUPERFAMILY SSF52540 385 676 3.43E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04895 5d7f0d9673a998122c052ee186e3b235 684 PANTHER PTHR11070 99 677 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APECO1_RS27165 b95e37e16dc379bbd5832e01dfc45088 115 PANTHER PTHR23135 1 114 5.7E-48 T 22-04-2016 APECO1_RS27165 b95e37e16dc379bbd5832e01dfc45088 115 PANTHER PTHR23135:SF5 1 114 5.7E-48 T 22-04-2016 APECO1_RS27165 b95e37e16dc379bbd5832e01dfc45088 115 SUPERFAMILY SSF53244 7 113 3.85E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS27165 b95e37e16dc379bbd5832e01dfc45088 115 Pfam PF02875 Mur ligase family, glutamate ligase domain 10 102 4.0E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS27165 b95e37e16dc379bbd5832e01dfc45088 115 Gene3D G3DSA:3.90.190.20 9 114 5.9E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 PANTHER PTHR32294:SF0 2 1160 0.0 T 22-04-2016 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 2.8E-25 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 PANTHER PTHR32294 2 1160 0.0 T 22-04-2016 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 2.0E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 Gene3D G3DSA:3.20.20.140 6 257 1.1E-21 T 22-04-2016 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 4.3E-179 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 SMART SM00481 7 74 1.5E-26 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 SUPERFAMILY SSF89550 6 263 6.47E-18 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 Gene3D G3DSA:2.40.50.140 982 1078 7.6E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 Pfam PF02811 PHP domain 8 171 6.4E-40 T 22-04-2016 IPR004013 PHP domain GO:0003824 APECO1_RS00970 3b11f6a87822a51d11103dfc128f7a17 1160 Gene3D G3DSA:1.10.150.280 836 883 1.0E-5 T 22-04-2016 APECO1_RS10135 06b71cb11749684ab34f62de0e16a93a 266 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 12 244 1.0E-91 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 APECO1_RS10135 06b71cb11749684ab34f62de0e16a93a 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 213 9.1E-22 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APECO1_RS10135 06b71cb11749684ab34f62de0e16a93a 266 Pfam PF02358 Trehalose-phosphatase 18 229 5.0E-56 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 APECO1_RS10135 06b71cb11749684ab34f62de0e16a93a 266 SUPERFAMILY SSF56784 17 243 7.17E-40 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS10135 06b71cb11749684ab34f62de0e16a93a 266 PANTHER PTHR10788 1 248 2.2E-181 T 22-04-2016 APECO1_RS10135 06b71cb11749684ab34f62de0e16a93a 266 PANTHER PTHR10788:SF42 1 248 2.2E-181 T 22-04-2016 APECO1_RS10135 06b71cb11749684ab34f62de0e16a93a 266 Gene3D G3DSA:3.40.50.1000 15 90 1.5E-44 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS10135 06b71cb11749684ab34f62de0e16a93a 266 Gene3D G3DSA:3.40.50.1000 165 257 1.5E-44 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS16085 37f174ea166186789ac24e2bac809d0a 142 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 3 113 4.3E-25 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein APECO1_RS16085 37f174ea166186789ac24e2bac809d0a 142 Pfam PF04965 Gene 25-like lysozyme 30 112 6.4E-12 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD APECO1_RS16085 37f174ea166186789ac24e2bac809d0a 142 Gene3D G3DSA:3.10.450.40 32 116 1.2E-11 T 22-04-2016 APECO1_RS16085 37f174ea166186789ac24e2bac809d0a 142 SUPERFAMILY SSF160719 29 117 2.48E-19 T 22-04-2016 APECO1_RS24445 a5d2fda31b0b1c4f2a4290948bddd822 690 PANTHER PTHR11632:SF6 41 542 5.1E-47 T 22-04-2016 APECO1_RS24445 a5d2fda31b0b1c4f2a4290948bddd822 690 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 44 63 1.4E-8 T 22-04-2016 APECO1_RS24445 a5d2fda31b0b1c4f2a4290948bddd822 690 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 462 1.4E-8 T 22-04-2016 APECO1_RS24445 a5d2fda31b0b1c4f2a4290948bddd822 690 PANTHER PTHR11632 41 542 5.1E-47 T 22-04-2016 APECO1_RS24445 a5d2fda31b0b1c4f2a4290948bddd822 690 Pfam PF00890 FAD binding domain 43 475 2.4E-27 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APECO1_RS24445 a5d2fda31b0b1c4f2a4290948bddd822 690 Gene3D G3DSA:3.50.50.60 433 487 1.3E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24445 a5d2fda31b0b1c4f2a4290948bddd822 690 Gene3D G3DSA:3.50.50.60 41 279 1.3E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24445 a5d2fda31b0b1c4f2a4290948bddd822 690 SUPERFAMILY SSF51905 441 494 1.15E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24445 a5d2fda31b0b1c4f2a4290948bddd822 690 SUPERFAMILY SSF51905 39 276 1.15E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 SUPERFAMILY SSF50249 13 155 1.79E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 Gene3D G3DSA:2.40.50.140 16 154 4.1E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 5.3E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 SUPERFAMILY SSF55681 162 502 2.84E-123 T 22-04-2016 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 PANTHER PTHR22594:SF4 1 503 6.9E-292 T 22-04-2016 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 PANTHER PTHR22594 1 503 6.9E-292 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 1.4E-239 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.612 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 PIRSF PIRSF039101 1 505 5.4E-206 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 2.0E-82 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 Gene3D G3DSA:3.30.930.10 157 500 1.3E-123 T 22-04-2016 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.1E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.1E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.1E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.1E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS16410 94de208da804ca385f33570c2fb3ac2d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.1E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 SMART SM00662 23 234 3.0E-105 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:1.10.150.20 244 328 6.1E-38 T 22-04-2016 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:2.170.120.12 58 177 5.0E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.651 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:3.30.1360.10 9 57 1.5E-10 T 22-04-2016 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 4.3E-113 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 PANTHER PTHR32108 1 329 1.6E-159 T 22-04-2016 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF56553 53 178 1.45E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 22-04-2016 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 PANTHER PTHR32108:SF0 1 329 1.6E-159 T 22-04-2016 APECO1_RS18945 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.6E-23 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 Gene3D G3DSA:3.40.50.300 349 572 3.9E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 SMART SM00382 375 560 3.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 PANTHER PTHR24221:SF261 1 588 0.0 T 22-04-2016 APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 Pfam PF00005 ABC transporter 369 513 1.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 PANTHER PTHR24221 1 588 0.0 T 22-04-2016 APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 Gene3D G3DSA:1.20.1560.10 21 335 5.7E-45 T 22-04-2016 APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 Pfam PF00664 ABC transporter transmembrane region 26 291 8.2E-49 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 SUPERFAMILY SSF52540 348 582 1.43E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 SUPERFAMILY SSF90123 11 331 9.16E-54 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS04355 3c8f099d3b75f0ec20b2258d136d758c 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 1.4E-188 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 PANTHER PTHR30251:SF6 1 238 5.7E-135 T 22-04-2016 APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 105 122 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 Gene3D G3DSA:2.60.40.360 29 147 7.6E-43 T 22-04-2016 IPR008962 PapD-like APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 147 3.6E-36 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 SUPERFAMILY SSF49584 155 242 1.44E-23 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 Gene3D G3DSA:2.60.40.1070 153 241 2.0E-27 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 PRINTS PR00969 Pili chaperone signature 129 144 4.7E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 PRINTS PR00969 Pili chaperone signature 30 39 4.7E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 PRINTS PR00969 Pili chaperone signature 76 97 4.7E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 PRINTS PR00969 Pili chaperone signature 106 123 4.7E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 PRINTS PR00969 Pili chaperone signature 166 181 4.7E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 228 2.7E-11 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 SUPERFAMILY SSF49354 29 147 1.49E-36 T 22-04-2016 IPR008962 PapD-like APECO1_RS12970 2e68ad99f41cf793d545ebad37daa43e 250 PANTHER PTHR30251 1 238 5.7E-135 T 22-04-2016 APECO1_RS15350 fc4f077eb268a92f29017fcaaedd8fa3 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APECO1_RS15350 fc4f077eb268a92f29017fcaaedd8fa3 61 PANTHER PTHR34984 1 61 6.2E-34 T 22-04-2016 APECO1_RS15350 fc4f077eb268a92f29017fcaaedd8fa3 61 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APECO1_RS15350 fc4f077eb268a92f29017fcaaedd8fa3 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 22-04-2016 APECO1_RS15350 fc4f077eb268a92f29017fcaaedd8fa3 61 PANTHER PTHR34984:SF1 1 61 6.2E-34 T 22-04-2016 APECO1_RS15350 fc4f077eb268a92f29017fcaaedd8fa3 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-31 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APECO1_RS15350 fc4f077eb268a92f29017fcaaedd8fa3 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.514 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APECO1_RS16625 24829bce9ca019fed55164a904a462f6 147 SUPERFAMILY SSF55804 1 145 5.62E-32 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS16625 24829bce9ca019fed55164a904a462f6 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 11 145 9.9E-27 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS16625 24829bce9ca019fed55164a904a462f6 147 PANTHER PTHR36203 1 146 1.8E-63 T 22-04-2016 APECO1_RS16625 24829bce9ca019fed55164a904a462f6 147 Gene3D G3DSA:3.40.930.10 1 146 6.3E-48 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS10945 e7b279cde7f061781199c9eb7b11519a 310 PANTHER PTHR30582 32 309 5.4E-139 T 22-04-2016 APECO1_RS10945 e7b279cde7f061781199c9eb7b11519a 310 Gene3D G3DSA:2.40.440.10 90 231 3.0E-36 T 22-04-2016 APECO1_RS10945 e7b279cde7f061781199c9eb7b11519a 310 SUPERFAMILY SSF141523 174 231 8.5E-29 T 22-04-2016 APECO1_RS10945 e7b279cde7f061781199c9eb7b11519a 310 SUPERFAMILY SSF141523 95 146 8.5E-29 T 22-04-2016 APECO1_RS10945 e7b279cde7f061781199c9eb7b11519a 310 PANTHER PTHR30582:SF8 32 309 5.4E-139 T 22-04-2016 APECO1_RS10945 e7b279cde7f061781199c9eb7b11519a 310 Pfam PF03734 L,D-transpeptidase catalytic domain 96 230 3.5E-20 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 PANTHER PTHR30258 14 496 1.4E-274 T 22-04-2016 APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 SUPERFAMILY SSF160246 13 76 2.88E-13 T 22-04-2016 APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 Gene3D G3DSA:3.30.450.90 93 222 1.3E-53 T 22-04-2016 APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 SUPERFAMILY SSF52540 106 494 1.25E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 SMART SM00382 250 373 0.0065 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 Pfam PF00437 Type II/IV secretion system protein 124 389 3.9E-88 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 494 2.5E-212 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 317 331 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 PANTHER PTHR30258:SF9 14 496 1.4E-274 T 22-04-2016 APECO1_RS17230 335b6545a08440e9b2b5869c72edfe8e 497 Gene3D G3DSA:3.40.50.300 228 494 1.3E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05675 e02c82f749b1fa75aa870bff57531423 285 Gene3D G3DSA:1.10.3720.10 3 273 1.3E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS05675 e02c82f749b1fa75aa870bff57531423 285 SUPERFAMILY SSF161098 6 274 4.32E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS05675 e02c82f749b1fa75aa870bff57531423 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 1.5E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS05675 e02c82f749b1fa75aa870bff57531423 285 PANTHER PTHR30193 1 285 1.1E-126 T 22-04-2016 APECO1_RS05675 e02c82f749b1fa75aa870bff57531423 285 PANTHER PTHR30193:SF10 1 285 1.1E-126 T 22-04-2016 APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 SUPERFAMILY SSF52540 206 453 4.53E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 PANTHER PTHR24031 299 603 4.7E-128 T 22-04-2016 APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 PANTHER PTHR24031 655 690 4.7E-128 T 22-04-2016 APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 PANTHER PTHR24031 268 282 4.7E-128 T 22-04-2016 APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 SUPERFAMILY SSF52540 508 653 1.74E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 SUPERFAMILY SSF52540 292 342 1.74E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 Gene3D G3DSA:1.10.150.20 5 37 2.7E-4 T 22-04-2016 APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 SUPERFAMILY SSF50249 9 176 1.58E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 SMART SM00490 505 589 4.4E-22 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 Gene3D G3DSA:3.40.50.300 454 638 7.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 Gene3D G3DSA:3.40.50.300 254 453 2.5E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 SMART SM00487 265 459 3.7E-31 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 Pfam PF00270 DEAD/DEAH box helicase 273 433 6.3E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 Pfam PF17191 RecG wedge domain 14 171 3.9E-21 T 22-04-2016 IPR033454 RecG, wedge domain APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 3.7E-252 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 Pfam PF00271 Helicase conserved C-terminal domain 481 588 1.9E-18 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 Gene3D G3DSA:2.40.50.140 47 138 1.8E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 PANTHER PTHR24031:SF249 299 603 4.7E-128 T 22-04-2016 APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 PANTHER PTHR24031:SF249 655 690 4.7E-128 T 22-04-2016 APECO1_RS20855 b782057d6fda8e674b5e36770bfd98a4 693 PANTHER PTHR24031:SF249 268 282 4.7E-128 T 22-04-2016 APECO1_RS01890 971e6b8f268225a8f739abd0025c312c 283 PANTHER PTHR30468:SF2 1 283 7.3E-106 T 22-04-2016 APECO1_RS01890 971e6b8f268225a8f739abd0025c312c 283 Gene3D G3DSA:3.60.130.10 2 281 1.3E-102 T 22-04-2016 APECO1_RS01890 971e6b8f268225a8f739abd0025c312c 283 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 2.5E-67 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 APECO1_RS01890 971e6b8f268225a8f739abd0025c312c 283 SUPERFAMILY SSF51197 5 281 1.51E-99 T 22-04-2016 APECO1_RS01890 971e6b8f268225a8f739abd0025c312c 283 PANTHER PTHR30468 1 283 7.3E-106 T 22-04-2016 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.4E-241 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 104 171 8.1E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 20 78 7.6E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 361 434 9.3E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Pfam PF00575 S1 RNA binding domain 449 520 4.5E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 255 371 1.03E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 448 521 3.6E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 102 172 5.5E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 360 439 5.8E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.3E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.3E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.3E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.3E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.3E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.3E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.3E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.3E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.3E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 19 87 6.8E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 190 260 2.8E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 449 520 2.9E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 275 347 2.2E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 362 434 3.4E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SMART SM00316 103 171 2.0E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 1 112 9.43E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 429 535 1.72E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 106 185 3.43E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PANTHER PTHR10724:SF6 1 514 2.1E-282 T 22-04-2016 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 21 101 1.3E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 279 359 3.9E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 Gene3D G3DSA:2.40.50.140 192 278 6.7E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 SUPERFAMILY SSF50249 362 443 1.56E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PIRSF PIRSF002111 1 534 2.7E-221 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS04665 3a715b3d0635089e27f33e920bee8f54 557 PANTHER PTHR10724 1 514 2.1E-282 T 22-04-2016 APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SUPERFAMILY SSF49373 558 646 6.75E-24 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Pfam PF02369 Bacterial Ig-like domain (group 1) 2 50 2.0E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Pfam PF02369 Bacterial Ig-like domain (group 1) 256 343 2.2E-22 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Pfam PF02369 Bacterial Ig-like domain (group 1) 53 146 3.0E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Pfam PF02369 Bacterial Ig-like domain (group 1) 348 445 1.1E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Pfam PF02369 Bacterial Ig-like domain (group 1) 156 244 1.8E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SUPERFAMILY SSF49373 10 54 1.99E-7 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SUPERFAMILY SSF49373 51 144 1.14E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SMART SM00634 252 341 3.2E-24 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SMART SM00634 158 247 6.3E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SMART SM00634 58 146 3.6E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SMART SM00634 353 443 1.0E-21 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SUPERFAMILY SSF49373 346 434 6.87E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Gene3D G3DSA:2.60.40.920 6 55 2.6E-9 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Gene3D G3DSA:2.60.40.920 348 446 6.3E-16 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Gene3D G3DSA:2.60.40.920 449 549 6.0E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SUPERFAMILY SSF49373 264 343 7.06E-15 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SUPERFAMILY SSF49373 174 244 2.16E-13 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Gene3D G3DSA:2.60.40.920 262 345 1.6E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Gene3D G3DSA:2.60.40.920 58 142 3.1E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Gene3D G3DSA:2.60.40.920 173 246 1.3E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 Gene3D G3DSA:2.60.40.1080 559 643 3.8E-23 T 22-04-2016 APECO1_RS10890 9a6e2dcd692f2eea1e4ecaa56d646615 652 SUPERFAMILY SSF49373 449 550 1.83E-12 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 5.4E-76 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 PANTHER PTHR12128 2 289 5.8E-86 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 SUPERFAMILY SSF51569 1 292 3.45E-87 T 22-04-2016 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 Gene3D G3DSA:3.20.20.70 1 294 3.4E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 SMART SM01130 3 292 1.6E-101 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 PIRSF PIRSF001365 1 293 1.9E-72 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 289 3.1E-64 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 3.3E-24 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 3.3E-24 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 3.3E-24 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS19830 680c97bb71231939f3aeafa1dc92fe28 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 3.3E-24 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS16695 cdd5f9cab8a3311b675752041f458eed 243 SUPERFAMILY SSF75217 75 242 2.35E-51 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APECO1_RS16695 cdd5f9cab8a3311b675752041f458eed 243 PANTHER PTHR30027:SF3 1 243 1.1E-106 T 22-04-2016 APECO1_RS16695 cdd5f9cab8a3311b675752041f458eed 243 Gene3D G3DSA:2.40.240.20 1 71 2.1E-30 T 22-04-2016 APECO1_RS16695 cdd5f9cab8a3311b675752041f458eed 243 SUPERFAMILY SSF88697 2 70 4.22E-18 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS16695 cdd5f9cab8a3311b675752041f458eed 243 Pfam PF04452 RNA methyltransferase 20 236 1.1E-73 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS16695 cdd5f9cab8a3311b675752041f458eed 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.0E-95 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS16695 cdd5f9cab8a3311b675752041f458eed 243 PANTHER PTHR30027 1 243 1.1E-106 T 22-04-2016 APECO1_RS16695 cdd5f9cab8a3311b675752041f458eed 243 PIRSF PIRSF015601 2 242 8.6E-52 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS16695 cdd5f9cab8a3311b675752041f458eed 243 Gene3D G3DSA:3.40.1280.10 75 242 8.0E-59 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APECO1_RS18405 cf5447b7d727e4f0b5b24588733c5d75 97 PANTHER PTHR35849:SF1 1 94 5.2E-37 T 22-04-2016 APECO1_RS18405 cf5447b7d727e4f0b5b24588733c5d75 97 Gene3D G3DSA:3.30.750.24 10 90 6.5E-11 T 22-04-2016 IPR002645 STAS domain APECO1_RS18405 cf5447b7d727e4f0b5b24588733c5d75 97 SUPERFAMILY SSF52091 6 91 5.49E-14 T 22-04-2016 IPR002645 STAS domain APECO1_RS18405 cf5447b7d727e4f0b5b24588733c5d75 97 Pfam PF13466 STAS domain 14 90 5.9E-17 T 22-04-2016 IPR002645 STAS domain APECO1_RS18405 cf5447b7d727e4f0b5b24588733c5d75 97 PANTHER PTHR35849 1 94 5.2E-37 T 22-04-2016 APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 SMART SM00829 14 335 3.8E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 PANTHER PTHR11695 16 335 5.4E-111 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 SUPERFAMILY SSF50129 2 184 3.8E-44 T 22-04-2016 IPR011032 GroES-like APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 SUPERFAMILY SSF51735 142 305 1.65E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 1.6E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 Pfam PF00107 Zinc-binding dehydrogenase 179 301 8.4E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 Gene3D G3DSA:3.40.50.720 189 289 1.1E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 Gene3D G3DSA:3.90.180.10 3 188 3.4E-60 T 22-04-2016 IPR011032 GroES-like APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APECO1_RS24770 ecf4a1c4b7626b18f8728d074c832ef2 339 PANTHER PTHR11695:SF582 16 335 5.4E-111 T 22-04-2016 APECO1_RS24910 4ce840df92178e601f69892758ae46da 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.6E-74 T 22-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- APECO1_RS24910 4ce840df92178e601f69892758ae46da 210 Pfam PF02734 DAK2 domain 33 205 7.2E-53 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APECO1_RS24910 4ce840df92178e601f69892758ae46da 210 SMART SM01120 32 206 4.9E-77 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APECO1_RS24910 4ce840df92178e601f69892758ae46da 210 SUPERFAMILY SSF101473 1 206 3.01E-56 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APECO1_RS24910 4ce840df92178e601f69892758ae46da 210 PANTHER PTHR28629 1 210 4.1E-75 T 22-04-2016 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 Gene3D G3DSA:3.20.20.70 5 294 1.8E-146 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 Pfam PF08013 Tagatose 6 phosphate kinase 4 423 1.9E-201 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 PANTHER PTHR32502 226 426 2.8E-192 T 22-04-2016 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 PANTHER PTHR32502 12 182 2.8E-192 T 22-04-2016 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 Gene3D G3DSA:1.10.400.20 295 409 8.9E-55 T 22-04-2016 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 SUPERFAMILY SSF51569 4 423 2.93E-171 T 22-04-2016 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 PANTHER PTHR32502:SF2 226 426 2.8E-192 T 22-04-2016 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 PANTHER PTHR32502:SF2 12 182 2.8E-192 T 22-04-2016 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 2.2E-217 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 Hamap MF_01295 D-tagatose-1,6-bisphosphate aldolase subunit KbaZ [kbaZ]. 1 426 82.026 T 22-04-2016 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ UniPathway: UPA00704 APECO1_RS18115 92fc2ec809ec906f7fbdbbb5c8f96022 426 PIRSF PIRSF009264 1 426 1.4E-211 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 Pfam PF13438 Domain of unknown function (DUF4113) 371 421 5.9E-22 T 22-04-2016 IPR025188 Domain of unknown function DUF4113 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 351 1.0E-10 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 PANTHER PTHR11076 1 397 2.2E-214 T 22-04-2016 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 Gene3D G3DSA:3.30.1490.100 249 352 2.3E-4 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 Gene3D G3DSA:1.10.150.20 170 240 9.0E-23 T 22-04-2016 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 Pfam PF00817 impB/mucB/samB family 5 150 2.8E-38 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 PANTHER PTHR11076:SF40 1 397 2.2E-214 T 22-04-2016 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 SUPERFAMILY SSF56672 1 237 8.01E-72 T 22-04-2016 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 SUPERFAMILY SSF100879 250 345 4.71E-5 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 Gene3D G3DSA:3.30.70.270 67 157 2.3E-25 T 22-04-2016 APECO1_RS06255 ae0651e65736cae48f04fb8f02db0c0f 422 Pfam PF11798 IMS family HHH motif 172 200 4.3E-6 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS17600 28a8b4a3d9a5ea8750cd2036f45b4819 193 PANTHER PTHR10204:SF36 1 192 1.2E-135 T 22-04-2016 APECO1_RS17600 28a8b4a3d9a5ea8750cd2036f45b4819 193 Gene3D G3DSA:3.40.50.360 1 192 5.2E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS17600 28a8b4a3d9a5ea8750cd2036f45b4819 193 PANTHER PTHR10204 1 192 1.2E-135 T 22-04-2016 APECO1_RS17600 28a8b4a3d9a5ea8750cd2036f45b4819 193 Pfam PF02525 Flavodoxin-like fold 3 188 1.2E-37 T 22-04-2016 IPR003680 Flavodoxin-like fold APECO1_RS17600 28a8b4a3d9a5ea8750cd2036f45b4819 193 SUPERFAMILY SSF52218 1 192 4.61E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS17110 f5a5b860622f2c480fd66e2c7622bf42 511 SMART SM00052 249 495 4.9E-87 T 22-04-2016 IPR001633 EAL domain APECO1_RS17110 f5a5b860622f2c480fd66e2c7622bf42 511 SUPERFAMILY SSF141868 255 499 1.2E-71 T 22-04-2016 IPR001633 EAL domain APECO1_RS17110 f5a5b860622f2c480fd66e2c7622bf42 511 Gene3D G3DSA:3.20.20.450 256 497 8.3E-73 T 22-04-2016 IPR001633 EAL domain APECO1_RS17110 f5a5b860622f2c480fd66e2c7622bf42 511 Pfam PF12792 CSS motif domain associated with EAL 44 226 2.7E-7 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APECO1_RS17110 f5a5b860622f2c480fd66e2c7622bf42 511 PANTHER PTHR33121:SF1 203 497 2.7E-84 T 22-04-2016 APECO1_RS17110 f5a5b860622f2c480fd66e2c7622bf42 511 Pfam PF00563 EAL domain 256 490 6.6E-61 T 22-04-2016 IPR001633 EAL domain APECO1_RS17110 f5a5b860622f2c480fd66e2c7622bf42 511 PANTHER PTHR33121 203 497 2.7E-84 T 22-04-2016 APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 Gene3D G3DSA:1.10.10.160 108 181 3.1E-25 T 22-04-2016 IPR013986 DExx box DNA helicase domain APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 SUPERFAMILY SSF52540 2 636 4.83E-163 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 9.4E-74 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 7.2E-71 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 PANTHER PTHR11070 1 667 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 Gene3D G3DSA:3.40.50.300 280 382 6.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 Gene3D G3DSA:3.40.50.300 550 637 6.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 PANTHER PTHR11070:SF19 1 667 0.0 T 22-04-2016 APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 Gene3D G3DSA:1.10.486.10 383 525 6.3E-41 T 22-04-2016 APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 Gene3D G3DSA:3.40.50.300 182 279 2.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 Gene3D G3DSA:3.40.50.300 2 104 2.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21510 fab1a94ccdd58454997b1f74e4f562cc 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.525 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SUPERFAMILY SSF141868 555 802 2.48E-82 T 22-04-2016 IPR001633 EAL domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 149 264 1.1E-14 T 22-04-2016 IPR000014 PAS domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 134 1.5E-21 T 22-04-2016 IPR000014 PAS domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 534 5.3E-15 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 Gene3D G3DSA:3.20.20.450 553 801 6.6E-90 T 22-04-2016 IPR001633 EAL domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SUPERFAMILY SSF55785 33 142 2.27E-19 T 22-04-2016 IPR000014 PAS domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 Gene3D G3DSA:3.30.70.270 386 546 2.1E-30 T 22-04-2016 APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 Gene3D G3DSA:3.30.450.20 26 132 1.1E-22 T 22-04-2016 APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SUPERFAMILY SSF55073 389 540 5.02E-28 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 Pfam PF13426 PAS domain 157 258 2.5E-11 T 22-04-2016 IPR000014 PAS domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 Pfam PF13426 PAS domain 32 133 2.1E-12 T 22-04-2016 IPR000014 PAS domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 Pfam PF00563 EAL domain 555 789 2.7E-67 T 22-04-2016 IPR001633 EAL domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SMART SM00086 217 259 1.1E-5 T 22-04-2016 IPR001610 PAC motif APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SMART SM00086 96 136 0.017 T 22-04-2016 IPR001610 PAC motif APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 PANTHER PTHR33121:SF13 285 300 3.6E-75 T 22-04-2016 APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 PANTHER PTHR33121:SF13 500 802 3.6E-75 T 22-04-2016 APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SUPERFAMILY SSF55785 151 258 9.42E-17 T 22-04-2016 IPR000014 PAS domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SMART SM00091 144 211 4.1E-7 T 22-04-2016 IPR000014 PAS domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SMART SM00091 20 86 4.4E-9 T 22-04-2016 IPR000014 PAS domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 PANTHER PTHR33121 285 300 3.6E-75 T 22-04-2016 APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 PANTHER PTHR33121 500 802 3.6E-75 T 22-04-2016 APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 Pfam PF00990 Diguanylate cyclase, GGDEF domain 385 533 1.0E-21 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SMART SM00267 373 538 2.4E-45 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 Gene3D G3DSA:3.30.450.20 136 257 3.0E-17 T 22-04-2016 APECO1_RS08210 1f9f72b9053054ccb7c854c13e29e9cf 807 SMART SM00052 548 794 5.2E-124 T 22-04-2016 IPR001633 EAL domain APECO1_RS12430 4a22478d63bf467b6f52526f00ae8f33 1504 SUPERFAMILY SSF48239 1027 1118 3.45E-5 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APECO1_RS12430 4a22478d63bf467b6f52526f00ae8f33 1504 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 630 776 6.3E-12 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APECO1_RS12430 4a22478d63bf467b6f52526f00ae8f33 1504 SMART SM01359 630 776 7.8E-29 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APECO1_RS12430 4a22478d63bf467b6f52526f00ae8f33 1504 SMART SM01360 841 932 4.4E-19 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APECO1_RS12430 4a22478d63bf467b6f52526f00ae8f33 1504 Gene3D G3DSA:2.60.40.670 540 607 9.2E-4 T 22-04-2016 IPR000601 PKD domain APECO1_RS12430 4a22478d63bf467b6f52526f00ae8f33 1504 Pfam PF00207 Alpha-2-macroglobulin family 841 924 4.2E-15 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APECO1_RS12430 4a22478d63bf467b6f52526f00ae8f33 1504 Pfam PF01835 MG2 domain 314 410 2.2E-17 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 APECO1_RS12430 4a22478d63bf467b6f52526f00ae8f33 1504 PANTHER PTHR11412 843 909 1.6E-44 T 22-04-2016 APECO1_RS12430 4a22478d63bf467b6f52526f00ae8f33 1504 PANTHER PTHR11412 283 607 1.6E-44 T 22-04-2016 APECO1_RS07940 fa976a94f40b62d777133d17e987d631 179 SUPERFAMILY SSF55729 7 175 3.24E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS07940 fa976a94f40b62d777133d17e987d631 179 PANTHER PTHR13256:SF22 7 179 1.3E-48 T 22-04-2016 APECO1_RS07940 fa976a94f40b62d777133d17e987d631 179 Gene3D G3DSA:3.40.630.30 6 175 4.7E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS07940 fa976a94f40b62d777133d17e987d631 179 PANTHER PTHR13256 7 179 1.3E-48 T 22-04-2016 APECO1_RS07940 fa976a94f40b62d777133d17e987d631 179 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 7.1E-22 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 Gene3D G3DSA:3.40.50.970 327 533 9.5E-81 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 SUPERFAMILY SSF52922 533 663 2.36E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 Gene3D G3DSA:3.40.50.920 538 663 1.5E-53 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 PANTHER PTHR11624:SF85 334 663 0.0 T 22-04-2016 APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 PANTHER PTHR11624:SF85 1 310 0.0 T 22-04-2016 APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 PANTHER PTHR11624 334 663 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 PANTHER PTHR11624 1 310 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 SMART SM00861 355 525 3.0E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 SUPERFAMILY SSF52518 336 526 2.65E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 4.5E-44 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 SUPERFAMILY SSF52518 5 320 1.23E-122 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 Gene3D G3DSA:3.40.50.970 4 320 2.2E-134 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 4.6E-175 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 1.3E-20 T 22-04-2016 IPR033248 Transketolase, C-terminal domain APECO1_RS16635 7315cff26e2dffe2b60b6abfe6641675 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 PANTHER PTHR21499:SF1 1 471 1.1E-188 T 22-04-2016 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 SUPERFAMILY SSF51735 464 636 3.73E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 SUPERFAMILY SSF55021 303 381 1.68E-22 T 22-04-2016 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 PIRSF PIRSF000727 1 818 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 Pfam PF13840 ACT domain 393 453 5.5E-9 T 22-04-2016 IPR027795 GATS-like ACT domain APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 PANTHER PTHR21499 1 471 1.1E-188 T 22-04-2016 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 Pfam PF00696 Amino acid kinase family 2 284 6.1E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 SUPERFAMILY SSF55347 614 798 3.6E-52 T 22-04-2016 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.1E-153 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 1.4E-33 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 SUPERFAMILY SSF53633 1 296 1.57E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 Gene3D G3DSA:3.30.360.10 636 792 1.1E-56 T 22-04-2016 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 Gene3D G3DSA:3.40.1160.10 111 300 1.8E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 Gene3D G3DSA:3.40.1160.10 1 49 1.8E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 Pfam PF00742 Homoserine dehydrogenase 614 811 2.3E-48 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 SUPERFAMILY SSF55021 383 476 3.02E-22 T 22-04-2016 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 Gene3D G3DSA:3.40.50.720 464 635 3.9E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00010 0f66dc2b3024a9739d0e912fde12b8ba 820 Pfam PF01842 ACT domain 324 376 7.1E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 Gene3D G3DSA:1.20.1250.20 21 224 8.8E-55 T 22-04-2016 APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 PIRSF PIRSF002808 5 452 2.2E-178 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 Pfam PF07690 Major Facilitator Superfamily 34 400 9.6E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 1.8E-271 T 22-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 Gene3D G3DSA:1.20.1250.20 246 448 4.4E-48 T 22-04-2016 APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 2.8E-170 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 SUPERFAMILY SSF103473 13 442 4.58E-85 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 PANTHER PTHR11662:SF141 1 450 5.0E-247 T 22-04-2016 APECO1_RS12490 b4a4ef6d9b9beebe794ad7fa6c83018e 452 PANTHER PTHR11662 1 450 5.0E-247 T 22-04-2016 APECO1_RS04875 aab969e6fd52a74ac95d5b6142eeaeea 169 PIRSF PIRSF003093 1 169 5.0E-88 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 APECO1_RS04875 aab969e6fd52a74ac95d5b6142eeaeea 169 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 169 42.039 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 APECO1_RS04875 aab969e6fd52a74ac95d5b6142eeaeea 169 PANTHER PTHR35369 6 169 2.9E-56 T 22-04-2016 APECO1_RS04875 aab969e6fd52a74ac95d5b6142eeaeea 169 Gene3D G3DSA:3.40.50.300 31 147 1.3E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04875 aab969e6fd52a74ac95d5b6142eeaeea 169 TIGRFAM TIGR00623 sula: cell division inhibitor SulA 2 169 1.1E-100 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 APECO1_RS04875 aab969e6fd52a74ac95d5b6142eeaeea 169 SUPERFAMILY SSF52540 31 147 3.4E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04875 aab969e6fd52a74ac95d5b6142eeaeea 169 Pfam PF03846 Cell division inhibitor SulA 7 119 4.5E-55 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 APECO1_RS09815 6602acb9098d7c3421e15335e787c7f1 427 PANTHER PTHR30462 11 427 4.5E-263 T 22-04-2016 APECO1_RS09815 6602acb9098d7c3421e15335e787c7f1 427 PANTHER PTHR30462:SF1 11 427 4.5E-263 T 22-04-2016 APECO1_RS09815 6602acb9098d7c3421e15335e787c7f1 427 Pfam PF04403 Paraquat-inducible protein A 66 217 2.3E-39 T 22-04-2016 IPR007498 Paraquat-inducible protein A APECO1_RS09815 6602acb9098d7c3421e15335e787c7f1 427 Pfam PF04403 Paraquat-inducible protein A 263 418 2.8E-43 T 22-04-2016 IPR007498 Paraquat-inducible protein A APECO1_RS09815 6602acb9098d7c3421e15335e787c7f1 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 16 417 2.4E-212 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 APECO1_RS21195 5d2c3abdf6ccc93970eee165330cba69 391 SUPERFAMILY SSF103473 3 385 5.49E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS21195 5d2c3abdf6ccc93970eee165330cba69 391 Gene3D G3DSA:1.20.1250.20 5 187 9.2E-34 T 22-04-2016 APECO1_RS21195 5d2c3abdf6ccc93970eee165330cba69 391 Gene3D G3DSA:1.20.1250.20 210 385 2.2E-9 T 22-04-2016 APECO1_RS21195 5d2c3abdf6ccc93970eee165330cba69 391 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 391 37.501 T 22-04-2016 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 APECO1_RS21195 5d2c3abdf6ccc93970eee165330cba69 391 PANTHER PTHR23502 1 375 7.2E-249 T 22-04-2016 APECO1_RS21195 5d2c3abdf6ccc93970eee165330cba69 391 PANTHER PTHR23502:SF57 1 375 7.2E-249 T 22-04-2016 APECO1_RS21195 5d2c3abdf6ccc93970eee165330cba69 391 Pfam PF07690 Major Facilitator Superfamily 10 342 6.7E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 3.1E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 PANTHER PTHR11071 1 164 3.2E-84 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 Gene3D G3DSA:2.40.100.10 2 162 7.5E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 PIRSF PIRSF001467 1 164 8.4E-29 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 PANTHER PTHR11071:SF192 1 164 3.2E-84 T 22-04-2016 APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 SUPERFAMILY SSF50891 1 162 7.6E-60 T 22-04-2016 IPR029000 Cyclophilin-like domain APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APECO1_RS02670 ecb84c28e798fa43f794edb97129bc6d 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 PIRSF PIRSF009393 1 756 3.6E-273 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 Gene3D G3DSA:3.90.1150.10 448 632 9.4E-69 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 382 396 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 PANTHER PTHR11751 142 475 6.7E-135 T 22-04-2016 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 SUPERFAMILY SSF53383 141 608 3.45E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 141 591 5.1E-196 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 19 135 4.6E-25 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 SUPERFAMILY SSF55904 611 755 1.96E-36 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 616 744 3.1E-43 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 Gene3D G3DSA:3.40.640.10 141 444 9.6E-108 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 PANTHER PTHR11751:SF353 142 475 6.7E-135 T 22-04-2016 APECO1_RS23565 07e2e0c2ad83c47fe70eccd6ff030546 756 Gene3D G3DSA:3.90.100.10 633 754 8.1E-31 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS06335 5caf8c18d9aca662b43ef3bbad4e0c13 326 SUPERFAMILY SSF81345 6 322 1.14E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS06335 5caf8c18d9aca662b43ef3bbad4e0c13 326 Pfam PF01032 FecCD transport family 12 322 6.8E-89 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS06335 5caf8c18d9aca662b43ef3bbad4e0c13 326 PANTHER PTHR30472:SF34 8 326 1.3E-118 T 22-04-2016 APECO1_RS06335 5caf8c18d9aca662b43ef3bbad4e0c13 326 PANTHER PTHR30472 8 326 1.3E-118 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS06335 5caf8c18d9aca662b43ef3bbad4e0c13 326 Gene3D G3DSA:1.10.3470.10 4 325 2.4E-102 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 Gene3D G3DSA:1.10.10.10 1 56 6.3E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 303 316 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 9.3E-12 T 22-04-2016 APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 SUPERFAMILY SSF53613 61 348 3.59E-54 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 SUPERFAMILY SSF46785 1 54 2.78E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 PANTHER PTHR10584:SF196 41 339 8.7E-128 T 22-04-2016 APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 Gene3D G3DSA:3.40.1190.20 60 339 2.1E-61 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 PANTHER PTHR10584 41 339 8.7E-128 T 22-04-2016 APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 Pfam PF00294 pfkB family carbohydrate kinase 59 348 1.5E-61 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS12085 d4d6b24c32fe1e614da25b9a44fc3335 362 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 Gene3D G3DSA:3.30.70.1450 421 483 6.3E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 PANTHER PTHR32507 1 576 1.1E-302 T 22-04-2016 APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 SMART SM01091 492 573 6.1E-14 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 Pfam PF03471 Transporter associated domain 493 571 2.5E-9 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 SUPERFAMILY SSF116726 417 483 6.54E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 Gene3D G3DSA:3.30.465.10 497 570 3.5E-9 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 SUPERFAMILY SSF56176 497 571 1.45E-8 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 PANTHER PTHR32507:SF7 1 576 1.1E-302 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 50.508 T 22-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 Pfam PF00999 Sodium/hydrogen exchanger family 16 388 8.9E-61 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APECO1_RS06290 307c6cd08cb792cb52c4d03aa772ef79 578 Pfam PF02080 TrkA-C domain 421 483 2.6E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS19775 87b8b95dfc8361927492eac2f4a7c068 425 PANTHER PTHR30482:SF9 59 424 1.2E-220 T 22-04-2016 APECO1_RS19775 87b8b95dfc8361927492eac2f4a7c068 425 PANTHER PTHR30482 59 424 1.2E-220 T 22-04-2016 APECO1_RS19775 87b8b95dfc8361927492eac2f4a7c068 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 2.1E-59 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS19775 87b8b95dfc8361927492eac2f4a7c068 425 Pfam PF11862 Domain of unknown function (DUF3382) 6 103 1.0E-24 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 PANTHER PTHR35191 756 1035 2.8E-158 T 22-04-2016 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 PANTHER PTHR35191 2 335 2.8E-158 T 22-04-2016 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 PANTHER PTHR35191 424 681 2.8E-158 T 22-04-2016 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Gene3D G3DSA:2.60.40.1120 5 81 1.3E-7 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF03406 Phage tail fibre repeat 550 590 1.3E-18 T 22-04-2016 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF03406 Phage tail fibre repeat 506 546 1.4E-18 T 22-04-2016 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF03406 Phage tail fibre repeat 462 502 1.7E-18 T 22-04-2016 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF03406 Phage tail fibre repeat 594 633 6.6E-17 T 22-04-2016 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF08400 Prophage tail fibre N-terminal 1 134 3.8E-70 T 22-04-2016 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 SUPERFAMILY SSF88874 799 926 2.49E-27 T 22-04-2016 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 SUPERFAMILY SSF49464 4 80 7.06E-7 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 SUPERFAMILY SSF88874 961 1034 5.49E-7 T 22-04-2016 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF07484 Phage Tail Collar Domain 805 851 5.3E-11 T 22-04-2016 IPR011083 Phage tail collar domain APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF03335 Phage tail fibre repeat 868 881 0.28 T 22-04-2016 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF03335 Phage tail fibre repeat 971 983 0.041 T 22-04-2016 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF03335 Phage tail fibre repeat 994 1005 0.86 T 22-04-2016 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF03335 Phage tail fibre repeat 985 996 2.0 T 22-04-2016 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Pfam PF03335 Phage tail fibre repeat 900 913 0.026 T 22-04-2016 IPR005003 Bacteriophage lambda, Stf, side tail fibre-repeat-1 GO:0005198 APECO1_RS06935 f15396bf82448fece1464d35ed91f2f7 1035 Gene3D G3DSA:3.90.1340.10 802 854 1.0E-7 T 22-04-2016 IPR011083 Phage tail collar domain APECO1_RS07520 97954d7d77005078f31fa0216dc6eb4d 253 Pfam PF07789 Protein of unknown function (DUF1627) 88 242 1.1E-95 T 22-04-2016 IPR012432 Protein of unknown function DUF1627 APECO1_RS07520 97954d7d77005078f31fa0216dc6eb4d 253 Gene3D G3DSA:1.10.10.10 2 62 1.0E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10365 067697348afad119da5d40c038da69a9 457 Gene3D G3DSA:3.40.50.300 138 421 3.1E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10365 067697348afad119da5d40c038da69a9 457 SMART SM00382 174 357 7.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS10365 067697348afad119da5d40c038da69a9 457 PANTHER PTHR15184 5 453 3.3E-237 T 22-04-2016 APECO1_RS10365 067697348afad119da5d40c038da69a9 457 SUPERFAMILY SSF52540 109 379 1.69E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10365 067697348afad119da5d40c038da69a9 457 PANTHER PTHR15184:SF9 5 453 3.3E-237 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS10365 067697348afad119da5d40c038da69a9 457 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 453 1.6E-201 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS10365 067697348afad119da5d40c038da69a9 457 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS10365 067697348afad119da5d40c038da69a9 457 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 373 2.1E-70 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS10365 067697348afad119da5d40c038da69a9 457 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 451 2.8E-196 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 Pfam PF13802 Galactose mutarotase-like 159 218 1.3E-15 T 22-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 Gene3D G3DSA:3.20.20.70 385 444 2.7E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 Gene3D G3DSA:3.20.20.70 275 350 2.7E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 PANTHER PTHR22762:SF88 1 684 0.0 T 22-04-2016 APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 SUPERFAMILY SSF117125 667 772 7.98E-36 T 22-04-2016 APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 SUPERFAMILY SSF51011 586 665 6.4E-21 T 22-04-2016 APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 SUPERFAMILY SSF74650 1 247 4.71E-68 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 PANTHER PTHR22762 1 684 0.0 T 22-04-2016 APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 Pfam PF01055 Glycosyl hydrolases family 31 240 666 2.1E-118 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 APECO1_RS20915 61b66687b3ef0cba558c2225409bd6d4 772 SUPERFAMILY SSF51445 263 603 5.47E-90 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS05145 9b7b22f5c506d57e20635493f02e6909 276 PANTHER PTHR31632 1 268 1.3E-100 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 APECO1_RS05145 9b7b22f5c506d57e20635493f02e6909 276 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 272 4.4E-105 T 22-04-2016 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0006827|GO:0033573 APECO1_RS05145 9b7b22f5c506d57e20635493f02e6909 276 Pfam PF03239 Iron permease FTR1 family 1 274 4.4E-76 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 APECO1_RS05145 9b7b22f5c506d57e20635493f02e6909 276 SUPERFAMILY SSF103473 5 264 4.05E-6 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS07750 b6f8fa9af0152c5f97624b4a7c648d61 190 SUPERFAMILY SSF50370 31 184 2.7E-38 T 22-04-2016 IPR000772 Ricin B, lectin domain APECO1_RS07750 b6f8fa9af0152c5f97624b4a7c648d61 190 Pfam PF03498 Cytolethal distending toxin A/C domain 45 184 5.0E-36 T 22-04-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 APECO1_RS07750 b6f8fa9af0152c5f97624b4a7c648d61 190 PRINTS PR01389 Cytolethal distending toxin C signature 52 67 8.0E-27 T 22-04-2016 IPR003559 Cytolethal distending toxin C GO:0009405 APECO1_RS07750 b6f8fa9af0152c5f97624b4a7c648d61 190 PRINTS PR01389 Cytolethal distending toxin C signature 112 130 8.0E-27 T 22-04-2016 IPR003559 Cytolethal distending toxin C GO:0009405 APECO1_RS07750 b6f8fa9af0152c5f97624b4a7c648d61 190 PRINTS PR01389 Cytolethal distending toxin C signature 92 108 8.0E-27 T 22-04-2016 IPR003559 Cytolethal distending toxin C GO:0009405 APECO1_RS07750 b6f8fa9af0152c5f97624b4a7c648d61 190 PRINTS PR01389 Cytolethal distending toxin C signature 7 24 8.0E-27 T 22-04-2016 IPR003559 Cytolethal distending toxin C GO:0009405 APECO1_RS07750 b6f8fa9af0152c5f97624b4a7c648d61 190 PRINTS PR01389 Cytolethal distending toxin C signature 157 174 8.0E-27 T 22-04-2016 IPR003559 Cytolethal distending toxin C GO:0009405 APECO1_RS07750 b6f8fa9af0152c5f97624b4a7c648d61 190 Gene3D G3DSA:2.80.10.50 27 189 5.3E-50 T 22-04-2016 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.8E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 PANTHER PTHR30055 1 193 1.2E-123 T 22-04-2016 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 1.4E-78 T 22-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 Gene3D G3DSA:1.10.357.10 1 191 1.1E-43 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 PANTHER PTHR30055:SF61 1 193 1.2E-123 T 22-04-2016 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 SUPERFAMILY SSF46689 6 79 3.75E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 Pfam PF13977 Bacterial transcriptional repressor 87 192 6.9E-28 T 22-04-2016 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 195 101.642 T 22-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APECO1_RS01675 973d3ee93a355a655dffba70c4603305 195 SUPERFAMILY SSF48498 87 190 8.12E-16 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 Pfam PF00890 FAD binding domain 9 405 2.5E-118 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF51905 4 259 1.97E-75 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF51905 359 440 1.97E-75 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 PANTHER PTHR11632:SF5 1 573 0.0 T 22-04-2016 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:3.50.50.60 351 425 2.5E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:3.50.50.60 6 242 2.5E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 5.2E-242 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.0E-35 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 PIRSF PIRSF000171 1 579 4.0E-47 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 PANTHER PTHR11632 1 573 0.0 T 22-04-2016 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 5.5E-5 T 22-04-2016 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.5E-5 T 22-04-2016 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:3.90.700.10 243 349 1.5E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:4.10.80.40 548 588 2.7E-21 T 22-04-2016 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 SUPERFAMILY SSF46977 452 588 2.88E-46 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 Gene3D G3DSA:1.20.58.100 433 547 6.0E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS03480 d58a08a8499799efa72d9df42f21ed0f 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 1.8E-278 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 PANTHER PTHR34156 2 314 2.9E-259 T 22-04-2016 APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 239 314 1.96E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 259 314 2.0E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 35 90 1.7E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 Pfam PF07338 Protein of unknown function (DUF1471) 119 174 1.1E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 PANTHER PTHR34156:SF2 2 314 2.9E-259 T 22-04-2016 APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 3 93 7.46E-22 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 SUPERFAMILY SSF159871 107 177 8.5E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 PIRSF PIRSF014774 1 314 2.1E-185 T 22-04-2016 IPR025539 YdgH protein APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 109 175 1.1E-24 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 249 314 8.0E-23 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS08615 3e495ad488f90b538c7e934663bb3f4c 314 Gene3D G3DSA:3.30.1660.10 25 90 2.3E-23 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS23945 d94c9fa1abcffb08daef7b59061089b5 241 Gene3D G3DSA:3.20.20.140 2 236 1.1E-39 T 22-04-2016 APECO1_RS23945 d94c9fa1abcffb08daef7b59061089b5 241 Pfam PF01026 TatD related DNase 3 238 1.9E-35 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS23945 d94c9fa1abcffb08daef7b59061089b5 241 SUPERFAMILY SSF51556 3 236 6.58E-45 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS23945 d94c9fa1abcffb08daef7b59061089b5 241 PIRSF PIRSF005902 1 240 3.7E-36 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS23945 d94c9fa1abcffb08daef7b59061089b5 241 PANTHER PTHR10060 3 236 6.1E-33 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS18455 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Pfam PF00005 ABC transporter 20 166 7.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS18455 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.9E-120 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 APECO1_RS18455 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS18455 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 SUPERFAMILY SSF52540 4 236 1.13E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18455 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Gene3D G3DSA:3.40.50.300 3 234 3.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18455 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 SMART SM00382 28 213 5.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS18455 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 1.6E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APECO1_RS18455 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 PANTHER PTHR24220:SF497 5 238 3.2E-151 T 22-04-2016 APECO1_RS18455 5b94fca7e3e7cf91dbf3e34e22a4c66b 241 PANTHER PTHR24220 5 238 3.2E-151 T 22-04-2016 APECO1_RS09805 8cd5deff936572d44a1f92e04f3f223f 232 PANTHER PTHR38106:SF1 1 232 2.6E-93 T 22-04-2016 APECO1_RS09805 8cd5deff936572d44a1f92e04f3f223f 232 Pfam PF04352 ProQ/FINO family 8 115 5.0E-42 T 22-04-2016 IPR016103 ProQ/FinO domain APECO1_RS09805 8cd5deff936572d44a1f92e04f3f223f 232 Gene3D G3DSA:1.10.1710.10 4 118 3.3E-36 T 22-04-2016 IPR016103 ProQ/FinO domain APECO1_RS09805 8cd5deff936572d44a1f92e04f3f223f 232 PANTHER PTHR38106 1 232 2.6E-93 T 22-04-2016 APECO1_RS09805 8cd5deff936572d44a1f92e04f3f223f 232 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 231 30.419 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 APECO1_RS09805 8cd5deff936572d44a1f92e04f3f223f 232 SMART SM00945 5 119 6.6E-60 T 22-04-2016 IPR016103 ProQ/FinO domain APECO1_RS09805 8cd5deff936572d44a1f92e04f3f223f 232 SUPERFAMILY SSF48657 5 119 5.23E-40 T 22-04-2016 IPR016103 ProQ/FinO domain APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 SUPERFAMILY SSF53697 15 373 1.89E-53 T 22-04-2016 APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 PANTHER PTHR32502:SF3 14 181 3.7E-202 T 22-04-2016 APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 PANTHER PTHR32502:SF3 231 383 3.7E-202 T 22-04-2016 APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 Pfam PF01380 SIS domain 221 357 4.0E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 Pfam PF01380 SIS domain 48 188 4.3E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 Gene3D G3DSA:3.40.50.10490 12 194 1.5E-68 T 22-04-2016 APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 13 382 3.3E-191 T 22-04-2016 IPR014180 Sugar isomerase, AgaS GO:0016861 KEGG: 00040+5.3.1.-|KEGG: 00052+5.3.1.- APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 Gene3D G3DSA:3.40.50.10490 199 376 4.5E-52 T 22-04-2016 APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 PANTHER PTHR32502 14 181 3.7E-202 T 22-04-2016 APECO1_RS18145 a853a8fa3748359661531d9dd02831e3 384 PANTHER PTHR32502 231 383 3.7E-202 T 22-04-2016 APECO1_RS19445 7c230d958d38807d9be6accaa3597254 711 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 3 697 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 APECO1_RS19445 7c230d958d38807d9be6accaa3597254 711 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 703 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 SMART SM00244 18 227 1.5E-47 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 SUPERFAMILY SSF117892 56 157 1.06E-16 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 SUPERFAMILY SSF117892 196 233 1.31E-7 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 PIRSF PIRSF005651 1 334 9.5E-111 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 1.3E-34 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 8.0E-150 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 PANTHER PTHR10264:SF80 4 156 7.0E-120 T 22-04-2016 APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 PANTHER PTHR10264:SF80 196 329 7.0E-120 T 22-04-2016 APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 PANTHER PTHR10264 4 156 7.0E-120 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS24280 215d629d08578afa7c3679e091d4fd50 334 PANTHER PTHR10264 196 329 7.0E-120 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 SUPERFAMILY SSF52540 1 207 1.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 201 1.3E-59 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 PANTHER PTHR11669 11 320 7.0E-123 T 22-04-2016 APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 Gene3D G3DSA:1.20.272.10 208 328 5.0E-48 T 22-04-2016 APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 PANTHER PTHR11669:SF8 11 320 7.0E-123 T 22-04-2016 APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 Pfam PF13177 DNA polymerase III, delta subunit 12 164 1.3E-40 T 22-04-2016 APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 Gene3D G3DSA:1.10.8.10 168 207 1.4E-25 T 22-04-2016 APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 Gene3D G3DSA:3.40.50.300 9 166 3.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 SUPERFAMILY SSF48019 208 328 6.97E-38 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APECO1_RS05545 9bd4d2b82ccae2ffe1aad503db84dea6 334 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 208 320 6.5E-37 T 22-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS09315 e50988174a047faa057f9a6d0fa0d53b 106 PANTHER PTHR34581 4 105 1.2E-52 T 22-04-2016 APECO1_RS09315 e50988174a047faa057f9a6d0fa0d53b 106 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 1.5E-34 T 22-04-2016 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 APECO1_RS09315 e50988174a047faa057f9a6d0fa0d53b 106 PANTHER PTHR34581:SF2 4 105 1.2E-52 T 22-04-2016 APECO1_RS09315 e50988174a047faa057f9a6d0fa0d53b 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 8.6E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS09315 e50988174a047faa057f9a6d0fa0d53b 106 Gene3D G3DSA:3.40.50.270 1 103 1.7E-35 T 22-04-2016 APECO1_RS09315 e50988174a047faa057f9a6d0fa0d53b 106 SUPERFAMILY SSF52794 4 102 1.33E-32 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 Gene3D G3DSA:2.40.37.10 208 355 8.9E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 TIGRFAM TIGR00492 alr: alanine racemase 4 356 3.4E-141 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 SUPERFAMILY SSF51419 9 233 4.58E-65 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 Hamap MF_01201 Alanine racemase. 2 356 33.893 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 4.0E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 SUPERFAMILY SSF50621 227 355 1.01E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PANTHER PTHR30511 1 352 7.0E-152 T 22-04-2016 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PRINTS PR00992 Alanine racemase signature 190 217 8.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PRINTS PR00992 Alanine racemase signature 61 79 8.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PRINTS PR00992 Alanine racemase signature 248 263 8.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PRINTS PR00992 Alanine racemase signature 155 166 8.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PRINTS PR00992 Alanine racemase signature 27 43 8.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PRINTS PR00992 Alanine racemase signature 286 303 8.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PRINTS PR00992 Alanine racemase signature 265 280 8.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PRINTS PR00992 Alanine racemase signature 121 133 8.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PRINTS PR00992 Alanine racemase signature 338 351 8.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 4.5E-67 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 SMART SM01005 232 356 6.6E-62 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 PANTHER PTHR30511:SF0 1 352 7.0E-152 T 22-04-2016 APECO1_RS06285 45ba2b16afe79e03b89d235ae4b677a6 356 Gene3D G3DSA:3.20.20.10 11 207 1.1E-67 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS13370 978f9583e1a6d3c518afcdb680e0407d 381 PANTHER PTHR24023:SF593 90 374 1.3E-28 T 22-04-2016 APECO1_RS13370 978f9583e1a6d3c518afcdb680e0407d 381 PANTHER PTHR24023 90 374 1.3E-28 T 22-04-2016 APECO1_RS13370 978f9583e1a6d3c518afcdb680e0407d 381 SUPERFAMILY SSF89796 8 378 2.22E-122 T 22-04-2016 IPR023606 CoA-transferase family III domain APECO1_RS13370 978f9583e1a6d3c518afcdb680e0407d 381 Gene3D G3DSA:3.40.50.10540 7 220 4.6E-98 T 22-04-2016 IPR023606 CoA-transferase family III domain APECO1_RS13370 978f9583e1a6d3c518afcdb680e0407d 381 Gene3D G3DSA:3.40.50.10540 309 378 4.6E-98 T 22-04-2016 IPR023606 CoA-transferase family III domain APECO1_RS13370 978f9583e1a6d3c518afcdb680e0407d 381 Gene3D G3DSA:3.30.1540.10 226 308 1.4E-25 T 22-04-2016 APECO1_RS13370 978f9583e1a6d3c518afcdb680e0407d 381 Pfam PF02515 CoA-transferase family III 11 361 7.2E-114 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 APECO1_RS12335 fce0a9fd1c3f288ef5762f20c92c792e 162 Pfam PF03974 Ecotin 30 152 5.5E-53 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain APECO1_RS12335 fce0a9fd1c3f288ef5762f20c92c792e 162 SUPERFAMILY SSF49772 26 160 9.94E-58 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain APECO1_RS12335 fce0a9fd1c3f288ef5762f20c92c792e 162 Gene3D G3DSA:2.60.40.550 23 104 5.6E-41 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain APECO1_RS12335 fce0a9fd1c3f288ef5762f20c92c792e 162 PANTHER PTHR35890:SF4 2 162 2.1E-105 T 22-04-2016 APECO1_RS12335 fce0a9fd1c3f288ef5762f20c92c792e 162 PIRSF PIRSF006865 1 162 3.4E-65 T 22-04-2016 IPR005658 Proteinase inhibitor I11, ecotin APECO1_RS12335 fce0a9fd1c3f288ef5762f20c92c792e 162 PANTHER PTHR35890 2 162 2.1E-105 T 22-04-2016 APECO1_RS12335 fce0a9fd1c3f288ef5762f20c92c792e 162 Gene3D G3DSA:4.10.1230.10 105 161 7.0E-32 T 22-04-2016 IPR027438 Ecotin, C-terminal APECO1_RS12335 fce0a9fd1c3f288ef5762f20c92c792e 162 Hamap MF_00706 Ecotin [eco]. 1 162 42.126 T 22-04-2016 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 SUPERFAMILY SSF46689 398 440 1.25E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 SUPERFAMILY SSF52172 4 185 1.11E-47 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 Gene3D G3DSA:3.40.50.2300 2 126 3.3E-39 T 22-04-2016 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 PANTHER PTHR32071:SF18 1 441 3.7E-232 T 22-04-2016 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 Pfam PF02954 Bacterial regulatory protein, Fis family 403 441 3.6E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 SMART SM00382 161 304 5.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 Gene3D G3DSA:1.10.10.60 398 440 7.7E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 Gene3D G3DSA:3.40.50.300 139 313 2.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 Pfam PF00072 Response regulator receiver domain 8 117 2.6E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 SMART SM00448 6 117 6.4E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 Gene3D G3DSA:1.10.8.60 314 389 5.6E-29 T 22-04-2016 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 Pfam PF00158 Sigma-54 interaction domain 141 307 5.3E-72 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 SUPERFAMILY SSF52540 141 385 9.88E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 2.9E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 441 2.9E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS22830 ec1515d968d56485133be6792feebaf8 441 PANTHER PTHR32071 1 441 3.7E-232 T 22-04-2016 APECO1_RS27905 3f9bcfc8aecf55a798bbc7429bf48a31 327 PANTHER PTHR30258 1 318 2.3E-211 T 22-04-2016 APECO1_RS27905 3f9bcfc8aecf55a798bbc7429bf48a31 327 SMART SM00382 75 217 4.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS27905 3f9bcfc8aecf55a798bbc7429bf48a31 327 SUPERFAMILY SSF52540 1 318 5.57E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS27905 3f9bcfc8aecf55a798bbc7429bf48a31 327 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 142 156 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APECO1_RS27905 3f9bcfc8aecf55a798bbc7429bf48a31 327 PANTHER PTHR30258:SF9 1 318 2.3E-211 T 22-04-2016 APECO1_RS27905 3f9bcfc8aecf55a798bbc7429bf48a31 327 Pfam PF00437 Type II/IV secretion system protein 1 214 2.1E-74 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APECO1_RS27905 3f9bcfc8aecf55a798bbc7429bf48a31 327 Gene3D G3DSA:3.30.450.90 1 47 1.1E-18 T 22-04-2016 APECO1_RS27905 3f9bcfc8aecf55a798bbc7429bf48a31 327 Gene3D G3DSA:3.40.50.300 53 320 1.8E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12895 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 PANTHER PTHR23517 1 391 4.7E-269 T 22-04-2016 APECO1_RS12895 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 Hamap MF_01118 UPF0226 membrane protein . 1 392 30.393 T 22-04-2016 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily APECO1_RS12895 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 SUPERFAMILY SSF103473 14 391 1.7E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS12895 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 PANTHER PTHR23517:SF1 1 391 4.7E-269 T 22-04-2016 APECO1_RS12895 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 Gene3D G3DSA:1.20.1250.20 17 198 7.0E-19 T 22-04-2016 APECO1_RS12895 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 Gene3D G3DSA:1.20.1250.20 221 388 2.0E-21 T 22-04-2016 APECO1_RS12895 9bf31f5efdf6f28c67a6f9e40ea9cfea 392 Pfam PF07690 Major Facilitator Superfamily 20 242 3.7E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS20355 7c76fb4f0418f17c59f0d1c312df237c 232 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 88 232 8.1E-5 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APECO1_RS20355 7c76fb4f0418f17c59f0d1c312df237c 232 Gene3D G3DSA:2.40.128.130 88 232 2.0E-8 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS20355 7c76fb4f0418f17c59f0d1c312df237c 232 Pfam PF03797 Autotransporter beta-domain 90 215 6.9E-10 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS20355 7c76fb4f0418f17c59f0d1c312df237c 232 SUPERFAMILY SSF103515 87 232 4.58E-11 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS20355 7c76fb4f0418f17c59f0d1c312df237c 232 PIRSF PIRSF030748 1 232 1.9E-150 T 22-04-2016 IPR016955 Autotransporter, YhjY, predicted APECO1_RS25260 15bf31aa51a705cdbc06278871f279cf 230 Pfam PF00717 Peptidase S24-like 140 202 7.5E-13 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APECO1_RS25260 15bf31aa51a705cdbc06278871f279cf 230 SUPERFAMILY SSF47413 1 66 3.84E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS25260 15bf31aa51a705cdbc06278871f279cf 230 Pfam PF13560 Helix-turn-helix domain 3 60 5.2E-12 T 22-04-2016 APECO1_RS25260 15bf31aa51a705cdbc06278871f279cf 230 SUPERFAMILY SSF51306 102 219 4.45E-21 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APECO1_RS25260 15bf31aa51a705cdbc06278871f279cf 230 SMART SM00530 6 62 1.2E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS25260 15bf31aa51a705cdbc06278871f279cf 230 PANTHER PTHR10245 1 220 7.8E-45 T 22-04-2016 APECO1_RS25260 15bf31aa51a705cdbc06278871f279cf 230 Gene3D G3DSA:2.10.109.10 104 219 9.5E-18 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APECO1_RS25260 15bf31aa51a705cdbc06278871f279cf 230 Gene3D G3DSA:1.10.260.40 2 85 8.4E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS25260 15bf31aa51a705cdbc06278871f279cf 230 PANTHER PTHR10245:SF53 1 220 7.8E-45 T 22-04-2016 APECO1_RS22895 522411cdf24a77029af50de3a18f03a7 274 Pfam PF01614 Bacterial transcriptional regulator 145 267 1.4E-41 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APECO1_RS22895 522411cdf24a77029af50de3a18f03a7 274 Gene3D G3DSA:1.10.10.10 16 85 2.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22895 522411cdf24a77029af50de3a18f03a7 274 Gene3D G3DSA:3.30.450.40 96 270 1.5E-57 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS22895 522411cdf24a77029af50de3a18f03a7 274 SUPERFAMILY SSF46785 24 97 2.37E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22895 522411cdf24a77029af50de3a18f03a7 274 SMART SM00346 24 114 5.8E-38 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS22895 522411cdf24a77029af50de3a18f03a7 274 PANTHER PTHR30136 1 274 2.5E-118 T 22-04-2016 APECO1_RS22895 522411cdf24a77029af50de3a18f03a7 274 Pfam PF09339 IclR helix-turn-helix domain 26 76 1.1E-18 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS22895 522411cdf24a77029af50de3a18f03a7 274 PANTHER PTHR30136:SF3 1 274 2.5E-118 T 22-04-2016 APECO1_RS22895 522411cdf24a77029af50de3a18f03a7 274 SUPERFAMILY SSF55781 95 271 3.01E-49 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS05295 81ce1ead4fcde383397eec126efc3cb9 837 PANTHER PTHR10587 457 732 2.1E-165 T 22-04-2016 APECO1_RS05295 81ce1ead4fcde383397eec126efc3cb9 837 PANTHER PTHR10587 139 408 2.1E-165 T 22-04-2016 APECO1_RS05295 81ce1ead4fcde383397eec126efc3cb9 837 PANTHER PTHR10587:SF63 457 732 2.1E-165 T 22-04-2016 APECO1_RS05295 81ce1ead4fcde383397eec126efc3cb9 837 PANTHER PTHR10587:SF63 139 408 2.1E-165 T 22-04-2016 APECO1_RS05295 81ce1ead4fcde383397eec126efc3cb9 837 SUPERFAMILY SSF53448 234 522 1.03E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS05295 81ce1ead4fcde383397eec126efc3cb9 837 Pfam PF00535 Glycosyl transferase family 2 236 418 3.7E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS05295 81ce1ead4fcde383397eec126efc3cb9 837 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 54 735 52.426 T 22-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 APECO1_RS09010 1f4617af1464b1f875cd9ff739f0b3f7 334 Gene3D G3DSA:3.10.350.10 40 86 1.3E-7 T 22-04-2016 IPR018392 LysM domain APECO1_RS09010 1f4617af1464b1f875cd9ff739f0b3f7 334 PANTHER PTHR30582:SF7 48 309 1.0E-220 T 22-04-2016 APECO1_RS09010 1f4617af1464b1f875cd9ff739f0b3f7 334 SUPERFAMILY SSF141523 94 232 8.89E-30 T 22-04-2016 APECO1_RS09010 1f4617af1464b1f875cd9ff739f0b3f7 334 Pfam PF01476 LysM domain 42 85 1.7E-8 T 22-04-2016 IPR018392 LysM domain APECO1_RS09010 1f4617af1464b1f875cd9ff739f0b3f7 334 SMART SM00257 41 85 4.0E-8 T 22-04-2016 IPR018392 LysM domain APECO1_RS09010 1f4617af1464b1f875cd9ff739f0b3f7 334 Gene3D G3DSA:2.40.440.10 90 234 5.9E-35 T 22-04-2016 APECO1_RS09010 1f4617af1464b1f875cd9ff739f0b3f7 334 PANTHER PTHR30582 48 309 1.0E-220 T 22-04-2016 APECO1_RS09010 1f4617af1464b1f875cd9ff739f0b3f7 334 Pfam PF03734 L,D-transpeptidase catalytic domain 97 232 4.0E-21 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 439 1.3E-30 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 SUPERFAMILY SSF47203 291 442 7.41E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 Gene3D G3DSA:2.40.110.10 181 276 2.8E-23 T 22-04-2016 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 PANTHER PTHR10909:SF289 27 459 9.1E-241 T 22-04-2016 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 Gene3D G3DSA:1.20.140.10 277 443 8.6E-43 T 22-04-2016 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 PANTHER PTHR10909 27 459 9.1E-241 T 22-04-2016 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 SUPERFAMILY SSF56645 60 282 6.62E-35 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 275 4.5E-18 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APECO1_RS24340 1d792282910c07dd57ac9849602da5a0 541 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PANTHER PTHR30587 1 245 1.8E-127 T 22-04-2016 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 Pfam PF00813 FliP family 48 239 9.2E-80 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 2.3E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 2.3E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 2.3E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 2.3E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 2.3E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 2.3E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PANTHER PTHR30587:SF0 1 245 1.8E-127 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 2.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 2.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 2.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 2.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 2.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 2.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APECO1_RS10400 87c8f2cf37ed5a72f51ad9973b2b229e 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 6.2E-95 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APECO1_RS06485 da11db16b90d0c9b98b9deb569040ab4 463 PANTHER PTHR23515 397 463 0.0 T 22-04-2016 APECO1_RS06485 da11db16b90d0c9b98b9deb569040ab4 463 PANTHER PTHR23515 5 377 0.0 T 22-04-2016 APECO1_RS06485 da11db16b90d0c9b98b9deb569040ab4 463 Pfam PF07690 Major Facilitator Superfamily 45 422 3.8E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS06485 da11db16b90d0c9b98b9deb569040ab4 463 SUPERFAMILY SSF103473 20 460 3.53E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS06485 da11db16b90d0c9b98b9deb569040ab4 463 Gene3D G3DSA:1.20.1250.20 31 232 1.2E-13 T 22-04-2016 APECO1_RS06485 da11db16b90d0c9b98b9deb569040ab4 463 Gene3D G3DSA:1.20.1250.20 252 457 1.4E-11 T 22-04-2016 APECO1_RS06485 da11db16b90d0c9b98b9deb569040ab4 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 1.1E-118 T 22-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 APECO1_RS06485 da11db16b90d0c9b98b9deb569040ab4 463 PANTHER PTHR23515:SF1 397 463 0.0 T 22-04-2016 APECO1_RS06485 da11db16b90d0c9b98b9deb569040ab4 463 PANTHER PTHR23515:SF1 5 377 0.0 T 22-04-2016 APECO1_RS01285 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 SUPERFAMILY SSF53697 1 189 2.6E-52 T 22-04-2016 APECO1_RS01285 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 Pfam PF13580 SIS domain 12 146 2.6E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS01285 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 Gene3D G3DSA:3.40.50.10490 1 190 6.7E-64 T 22-04-2016 APECO1_RS01285 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.958 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 APECO1_RS01285 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.4E-84 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 APECO1_RS01285 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 PANTHER PTHR30390 2 192 8.6E-95 T 22-04-2016 APECO1_RS01285 327c877d6f5c7e3c5044d7e2ffeb1d4e 192 PANTHER PTHR30390:SF6 2 192 8.6E-95 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 5.7E-28 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 471 5.6E-145 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PANTHER PTHR22912 1 465 9.2E-165 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 Gene3D G3DSA:3.50.50.60 147 342 1.4E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 Gene3D G3DSA:3.30.390.30 348 465 1.8E-37 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 333 5.7E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 SUPERFAMILY SSF51905 2 342 1.88E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 Gene3D G3DSA:3.50.50.60 2 146 2.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 5.85E-72 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 5.85E-72 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 5.85E-72 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 5.85E-72 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 5.85E-72 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 5.85E-72 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 5.85E-72 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 5.85E-72 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.85E-72 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PIRSF PIRSF000350 1 470 2.5E-70 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 SUPERFAMILY SSF55424 349 471 5.67E-34 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PANTHER PTHR22912:SF131 1 465 9.2E-165 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.54E-35 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.54E-35 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.54E-35 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.54E-35 T 22-04-2016 APECO1_RS23170 2fd1c980edb33d3a7eb870c118add2d1 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 1.54E-35 T 22-04-2016 APECO1_RS05380 4f0f401d3b1ae8677a2b1d1587832661 194 Gene3D G3DSA:3.40.630.30 9 186 8.1E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS05380 4f0f401d3b1ae8677a2b1d1587832661 194 SUPERFAMILY SSF55729 12 185 5.51E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS05380 4f0f401d3b1ae8677a2b1d1587832661 194 PANTHER PTHR13256:SF24 9 190 1.3E-89 T 22-04-2016 APECO1_RS05380 4f0f401d3b1ae8677a2b1d1587832661 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 3.4E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS05380 4f0f401d3b1ae8677a2b1d1587832661 194 PANTHER PTHR13256 9 190 1.3E-89 T 22-04-2016 APECO1_RS24605 0f688f8597bcd4a5ea7208bedf04c11c 128 Gene3D G3DSA:1.20.120.10 23 128 1.8E-46 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 APECO1_RS24605 0f688f8597bcd4a5ea7208bedf04c11c 128 Pfam PF07361 Cytochrome b562 24 128 2.1E-32 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 APECO1_RS24605 0f688f8597bcd4a5ea7208bedf04c11c 128 PIRSF PIRSF000029 1 128 5.8E-64 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 APECO1_RS24605 0f688f8597bcd4a5ea7208bedf04c11c 128 SUPERFAMILY SSF47175 23 128 1.83E-35 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 Pfam PF01979 Amidohydrolase family 53 410 4.8E-52 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 SUPERFAMILY SSF51556 56 353 4.81E-56 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 SUPERFAMILY SSF51338 1 56 2.53E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 SUPERFAMILY SSF51338 361 435 2.53E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 Gene3D G3DSA:3.20.20.140 59 370 4.6E-57 T 22-04-2016 APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 PANTHER PTHR11271:SF40 16 436 4.8E-243 T 22-04-2016 APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 PANTHER PTHR11271 16 436 4.8E-243 T 22-04-2016 APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 Gene3D G3DSA:2.30.40.10 371 413 8.8E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 Gene3D G3DSA:2.30.40.10 2 58 8.8E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16350 5b229737379399e7383d87e2c60fbee8 442 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 438 7.1E-222 T 22-04-2016 IPR017700 Putative selenium metabolism protein SsnA APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 SUPERFAMILY SSF55785 222 323 6.66E-7 T 22-04-2016 IPR000014 PAS domain APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 PANTHER PTHR24423 200 543 2.4E-193 T 22-04-2016 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 PANTHER PTHR24423 1 167 2.4E-193 T 22-04-2016 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 PANTHER PTHR24423:SF375 200 543 2.4E-193 T 22-04-2016 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 PANTHER PTHR24423:SF375 1 167 2.4E-193 T 22-04-2016 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 535 1.1E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 Gene3D G3DSA:3.30.450.20 41 179 9.2E-52 T 22-04-2016 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 Gene3D G3DSA:3.30.565.10 416 535 1.4E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 Pfam PF00989 PAS fold 222 323 4.4E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 331 387 5.9E-12 T 22-04-2016 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 SMART SM00091 222 288 7.4E-6 T 22-04-2016 IPR000014 PAS domain APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 SUPERFAMILY SSF55874 433 535 5.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 Gene3D G3DSA:1.10.287.130 329 387 1.3E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 SUPERFAMILY SSF55890 338 465 1.57E-16 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 Gene3D G3DSA:3.30.450.20 222 328 3.2E-12 T 22-04-2016 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 SMART SM00387 430 538 1.8E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 Pfam PF17203 Single cache domain 3 47 179 7.9E-22 T 22-04-2016 IPR033463 Single cache domain 3 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 SUPERFAMILY SSF103190 46 179 2.83E-41 T 22-04-2016 IPR029151 Periplasmic sensor domain-like APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS23610 070059405d91ae0aebb2320938ebd629 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 1.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS13785 b8c6929e00467975f8b7faa21fbdfa51 316 Gene3D G3DSA:3.20.20.70 1 315 3.3E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS13785 b8c6929e00467975f8b7faa21fbdfa51 316 TIGRFAM TIGR00874 talAB: transaldolase 2 316 2.1E-165 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS13785 b8c6929e00467975f8b7faa21fbdfa51 316 Hamap MF_00492 Transaldolase [tal]. 1 316 53.118 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS13785 b8c6929e00467975f8b7faa21fbdfa51 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS13785 b8c6929e00467975f8b7faa21fbdfa51 316 PANTHER PTHR10683 1 316 2.4E-271 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS13785 b8c6929e00467975f8b7faa21fbdfa51 316 SUPERFAMILY SSF51569 1 315 2.3E-114 T 22-04-2016 APECO1_RS13785 b8c6929e00467975f8b7faa21fbdfa51 316 Pfam PF00923 Transaldolase 13 310 8.7E-102 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS13785 b8c6929e00467975f8b7faa21fbdfa51 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS13785 b8c6929e00467975f8b7faa21fbdfa51 316 PANTHER PTHR10683:SF16 1 316 2.4E-271 T 22-04-2016 APECO1_RS17300 c91bbe5066a656ada56a4a4a7090503d 380 SUPERFAMILY SSF55729 145 377 1.69E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS17300 c91bbe5066a656ada56a4a4a7090503d 380 SUPERFAMILY SSF55729 9 117 1.69E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS17300 c91bbe5066a656ada56a4a4a7090503d 380 PANTHER PTHR41368 7 380 4.1E-159 T 22-04-2016 APECO1_RS17300 c91bbe5066a656ada56a4a4a7090503d 380 Gene3D G3DSA:3.40.630.30 212 374 6.0E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 PANTHER PTHR30346 1 305 1.7E-156 T 22-04-2016 APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:3.40.190.10 90 175 2.1E-18 T 22-04-2016 APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 SUPERFAMILY SSF46785 1 86 9.99E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:1.10.10.10 1 84 2.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.6E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 SUPERFAMILY SSF53850 89 295 4.5E-47 T 22-04-2016 APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 Gene3D G3DSA:3.40.190.10 176 267 2.0E-37 T 22-04-2016 APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 Pfam PF03466 LysR substrate binding domain 89 293 5.4E-54 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS22605 01f7ef453121c0bb818ead6a5da9a2b6 305 PANTHER PTHR30346:SF15 1 305 1.7E-156 T 22-04-2016 APECO1_RS21945 c3c18e3baa0905b1933ed89889dd7e4f 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-33 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APECO1_RS21945 c3c18e3baa0905b1933ed89889dd7e4f 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-33 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APECO1_RS21945 c3c18e3baa0905b1933ed89889dd7e4f 171 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-33 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APECO1_RS21945 c3c18e3baa0905b1933ed89889dd7e4f 171 PANTHER PTHR33162:SF4 2 143 2.2E-71 T 22-04-2016 APECO1_RS21945 c3c18e3baa0905b1933ed89889dd7e4f 171 PANTHER PTHR33162 2 143 2.2E-71 T 22-04-2016 APECO1_RS21945 c3c18e3baa0905b1933ed89889dd7e4f 171 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 143 19.305 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APECO1_RS21945 c3c18e3baa0905b1933ed89889dd7e4f 171 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 3.1E-31 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APECO1_RS09020 20d41c5b70938a8a981222f6dfcc8995 406 PANTHER PTHR11601 6 405 1.0E-199 T 22-04-2016 APECO1_RS09020 20d41c5b70938a8a981222f6dfcc8995 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 2.6E-188 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APECO1_RS09020 20d41c5b70938a8a981222f6dfcc8995 406 Pfam PF00266 Aminotransferase class-V 26 394 2.2E-157 T 22-04-2016 IPR000192 Aminotransferase class V domain APECO1_RS09020 20d41c5b70938a8a981222f6dfcc8995 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APECO1_RS09020 20d41c5b70938a8a981222f6dfcc8995 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 76.744 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APECO1_RS09020 20d41c5b70938a8a981222f6dfcc8995 406 Gene3D G3DSA:3.90.1150.10 285 400 1.2E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS09020 20d41c5b70938a8a981222f6dfcc8995 406 SUPERFAMILY SSF53383 4 402 4.35E-129 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS09020 20d41c5b70938a8a981222f6dfcc8995 406 PANTHER PTHR11601:SF17 6 405 1.0E-199 T 22-04-2016 APECO1_RS09020 20d41c5b70938a8a981222f6dfcc8995 406 Gene3D G3DSA:3.40.640.10 36 284 4.3E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS25340 ea739d67f50c5972f46c746a0a83683f 177 SUPERFAMILY SSF53955 5 172 1.48E-34 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS25340 ea739d67f50c5972f46c746a0a83683f 177 Gene3D G3DSA:1.10.530.40 29 174 1.7E-29 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 APECO1_RS25340 ea739d67f50c5972f46c746a0a83683f 177 PANTHER PTHR38107 1 177 2.9E-74 T 22-04-2016 APECO1_RS25340 ea739d67f50c5972f46c746a0a83683f 177 PANTHER PTHR38107:SF2 1 177 2.9E-74 T 22-04-2016 APECO1_RS25340 ea739d67f50c5972f46c746a0a83683f 177 Pfam PF00959 Phage lysozyme 48 166 2.1E-30 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.7E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 1.7E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 1.7E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 1.7E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 1.7E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 2.8E-47 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 Gene3D G3DSA:3.40.50.270 2 145 2.4E-46 T 22-04-2016 APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 PANTHER PTHR11717 1 147 7.2E-111 T 22-04-2016 APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 PANTHER PTHR11717:SF20 1 147 7.2E-111 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 SUPERFAMILY SSF52788 1 142 2.09E-44 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APECO1_RS11430 2ca3dbf50c5ece3000dbd129a0ed566e 147 SMART SM00226 3 141 9.8E-68 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 Gene3D G3DSA:1.20.120.140 185 276 5.2E-36 T 22-04-2016 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 Gene3D G3DSA:3.40.50.300 288 494 1.4E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 SUPERFAMILY SSF47364 195 274 1.7E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 Pfam PF02881 SRP54-type protein, helical bundle domain 211 276 1.9E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 SMART SM00962 294 495 2.1E-124 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 SMART SM00382 293 484 9.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 468 481 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 PANTHER PTHR11564 190 498 1.9E-156 T 22-04-2016 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 SMART SM00963 200 280 3.3E-24 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 Pfam PF00448 SRP54-type protein, GTPase domain 294 494 2.0E-79 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 SUPERFAMILY SSF52540 287 494 4.63E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 223 495 65.889 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 223 494 1.7E-116 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APECO1_RS19850 239dcd16036df8fd0c60476f68ab47fe 498 PANTHER PTHR11564:SF16 190 498 1.9E-156 T 22-04-2016 APECO1_RS10040 c21cb632e1243ea8fea7aeb6118b679d 188 SUPERFAMILY SSF54593 2 186 8.44E-71 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APECO1_RS10040 c21cb632e1243ea8fea7aeb6118b679d 188 Pfam PF06185 YecM protein 10 185 3.1E-72 T 22-04-2016 IPR010393 Protein of unknown function DUF991 APECO1_RS10040 c21cb632e1243ea8fea7aeb6118b679d 188 PANTHER PTHR37519 2 186 2.1E-114 T 22-04-2016 APECO1_RS10040 c21cb632e1243ea8fea7aeb6118b679d 188 Gene3D G3DSA:3.10.180.10 1 187 1.9E-80 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APECO1_RS10040 c21cb632e1243ea8fea7aeb6118b679d 188 PANTHER PTHR37519:SF1 2 186 2.1E-114 T 22-04-2016 APECO1_RS08385 35f5e821175f376d28960dc764bdabd1 221 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 213 6.2E-37 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APECO1_RS08385 35f5e821175f376d28960dc764bdabd1 221 Pfam PF01914 MarC family integral membrane protein 5 217 2.1E-71 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APECO1_RS08385 35f5e821175f376d28960dc764bdabd1 221 PANTHER PTHR33508 1 221 5.0E-141 T 22-04-2016 APECO1_RS08385 35f5e821175f376d28960dc764bdabd1 221 PANTHER PTHR33508:SF2 1 221 5.0E-141 T 22-04-2016 APECO1_RS17690 1847a5b795bfe2349e8d1d3bf512f371 222 Hamap MF_00932 Thiol:disulfide interchange protein DsbL [dsbL]. 1 222 67.531 T 22-04-2016 IPR028588 Thiol:disulfide interchange protein DsbL APECO1_RS17690 1847a5b795bfe2349e8d1d3bf512f371 222 SUPERFAMILY SSF52833 28 220 2.61E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS17690 1847a5b795bfe2349e8d1d3bf512f371 222 Gene3D G3DSA:3.40.30.10 142 220 1.3E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS17690 1847a5b795bfe2349e8d1d3bf512f371 222 Gene3D G3DSA:3.40.30.10 7 136 4.5E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS17690 1847a5b795bfe2349e8d1d3bf512f371 222 PANTHER PTHR35891:SF1 6 222 1.6E-120 T 22-04-2016 APECO1_RS17690 1847a5b795bfe2349e8d1d3bf512f371 222 PANTHER PTHR35891 6 222 1.6E-120 T 22-04-2016 APECO1_RS17690 1847a5b795bfe2349e8d1d3bf512f371 222 Pfam PF01323 DSBA-like thioredoxin domain 48 201 1.5E-11 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 APECO1_RS17690 1847a5b795bfe2349e8d1d3bf512f371 222 PIRSF PIRSF001488 1 222 1.7E-27 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL APECO1_RS25780 b847019a5b714f4bd438ff54355845cc 144 Gene3D G3DSA:2.60.34.10 1 97 1.4E-44 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APECO1_RS25780 b847019a5b714f4bd438ff54355845cc 144 PANTHER PTHR19375:SF173 1 144 1.5E-78 T 22-04-2016 APECO1_RS25780 b847019a5b714f4bd438ff54355845cc 144 SUPERFAMILY SSF100920 2 105 8.76E-37 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APECO1_RS25780 b847019a5b714f4bd438ff54355845cc 144 Gene3D G3DSA:1.20.1270.10 98 144 3.6E-20 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APECO1_RS25780 b847019a5b714f4bd438ff54355845cc 144 Pfam PF00012 Hsp70 protein 2 142 8.6E-48 T 22-04-2016 IPR013126 Heat shock protein 70 family APECO1_RS25780 b847019a5b714f4bd438ff54355845cc 144 PANTHER PTHR19375 1 144 1.5E-78 T 22-04-2016 APECO1_RS13875 c431ab61e0ddc8579810ce6d355caa2d 190 PANTHER PTHR34875 1 190 2.1E-92 T 22-04-2016 APECO1_RS13875 c431ab61e0ddc8579810ce6d355caa2d 190 Pfam PF01842 ACT domain 97 166 3.9E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS13875 c431ab61e0ddc8579810ce6d355caa2d 190 Pfam PF13740 ACT domain 7 82 5.0E-26 T 22-04-2016 APECO1_RS13875 c431ab61e0ddc8579810ce6d355caa2d 190 SUPERFAMILY SSF55021 91 179 1.53E-17 T 22-04-2016 APECO1_RS13875 c431ab61e0ddc8579810ce6d355caa2d 190 Gene3D G3DSA:3.30.70.260 92 188 4.2E-46 T 22-04-2016 APECO1_RS13875 c431ab61e0ddc8579810ce6d355caa2d 190 PIRSF PIRSF028103 5 180 1.2E-72 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 APECO1_RS13875 c431ab61e0ddc8579810ce6d355caa2d 190 Gene3D G3DSA:3.30.70.260 6 84 2.2E-32 T 22-04-2016 APECO1_RS13875 c431ab61e0ddc8579810ce6d355caa2d 190 SUPERFAMILY SSF55021 6 88 9.99E-17 T 22-04-2016 APECO1_RS13875 c431ab61e0ddc8579810ce6d355caa2d 190 PANTHER PTHR34875:SF3 1 190 2.1E-92 T 22-04-2016 APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 PANTHER PTHR30251 8 241 5.2E-127 T 22-04-2016 APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 PRINTS PR00969 Pili chaperone signature 83 104 2.2E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 PRINTS PR00969 Pili chaperone signature 38 47 2.2E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 PRINTS PR00969 Pili chaperone signature 173 188 2.2E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 PRINTS PR00969 Pili chaperone signature 138 153 2.2E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 PRINTS PR00969 Pili chaperone signature 112 129 2.2E-36 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 SUPERFAMILY SSF49354 37 156 1.75E-40 T 22-04-2016 IPR008962 PapD-like APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 Gene3D G3DSA:2.60.40.360 37 157 1.1E-45 T 22-04-2016 IPR008962 PapD-like APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 180 233 2.6E-10 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 PANTHER PTHR30251:SF11 8 241 5.2E-127 T 22-04-2016 APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 Gene3D G3DSA:2.60.40.1070 160 238 5.3E-26 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 SUPERFAMILY SSF49584 151 236 4.19E-20 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APECO1_RS24845 141fb0164306afd640563d8b80eeabd9 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 37 156 3.5E-38 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 SMART SM00971 9 113 3.2E-65 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 Gene3D G3DSA:2.160.10.10 143 252 1.3E-31 T 22-04-2016 APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 9.1E-40 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 PANTHER PTHR23416:SF2 5 258 3.8E-160 T 22-04-2016 APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 SUPERFAMILY SSF51161 5 260 2.63E-68 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.0E-10 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.5E-75 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 PANTHER PTHR23416 5 258 3.8E-160 T 22-04-2016 APECO1_RS20645 dbf5255db46feff6ef72b63754671791 273 Gene3D G3DSA:1.10.3130.10 7 142 1.3E-52 T 22-04-2016 APECO1_RS00490 a7b04547f0443b1a53135709e576d500 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 5.4E-49 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00490 a7b04547f0443b1a53135709e576d500 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 347 1.6E-113 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00490 a7b04547f0443b1a53135709e576d500 355 PANTHER PTHR21015:SF22 1 355 1.7E-134 T 22-04-2016 APECO1_RS00490 a7b04547f0443b1a53135709e576d500 355 Gene3D G3DSA:3.40.50.2000 254 324 3.4E-5 T 22-04-2016 APECO1_RS00490 a7b04547f0443b1a53135709e576d500 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.021 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00490 a7b04547f0443b1a53135709e576d500 355 SUPERFAMILY SSF53756 6 353 8.13E-131 T 22-04-2016 APECO1_RS00490 a7b04547f0443b1a53135709e576d500 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 344 1.4E-37 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00490 a7b04547f0443b1a53135709e576d500 355 Gene3D G3DSA:3.40.50.2000 5 196 1.7E-76 T 22-04-2016 APECO1_RS00490 a7b04547f0443b1a53135709e576d500 355 PANTHER PTHR21015 1 355 1.7E-134 T 22-04-2016 APECO1_RS08375 7c2e0a4ebbbb4873609da5bbdac16427 293 Gene3D G3DSA:1.10.10.10 1 80 4.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08375 7c2e0a4ebbbb4873609da5bbdac16427 293 PANTHER PTHR30126:SF31 1 282 8.0E-132 T 22-04-2016 APECO1_RS08375 7c2e0a4ebbbb4873609da5bbdac16427 293 Pfam PF03466 LysR substrate binding domain 85 282 7.6E-45 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS08375 7c2e0a4ebbbb4873609da5bbdac16427 293 Gene3D G3DSA:3.40.190.10 89 169 8.3E-17 T 22-04-2016 APECO1_RS08375 7c2e0a4ebbbb4873609da5bbdac16427 293 Gene3D G3DSA:3.40.190.10 170 256 2.5E-11 T 22-04-2016 APECO1_RS08375 7c2e0a4ebbbb4873609da5bbdac16427 293 SUPERFAMILY SSF46785 1 109 7.07E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08375 7c2e0a4ebbbb4873609da5bbdac16427 293 SUPERFAMILY SSF53850 85 283 4.34E-37 T 22-04-2016 APECO1_RS08375 7c2e0a4ebbbb4873609da5bbdac16427 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS08375 7c2e0a4ebbbb4873609da5bbdac16427 293 PANTHER PTHR30126 1 282 8.0E-132 T 22-04-2016 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 204 2.6E-70 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 7.0E-9 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Gene3D G3DSA:3.40.1010.10 215 331 6.9E-46 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Gene3D G3DSA:3.40.50.720 2 112 2.2E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Gene3D G3DSA:3.30.160.110 113 148 1.4E-19 T 22-04-2016 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Gene3D G3DSA:3.30.950.10 332 456 5.6E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Gene3D G3DSA:1.10.8.210 150 212 4.0E-23 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 PANTHER PTHR21091:SF16 165 442 7.4E-85 T 22-04-2016 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 1.9E-91 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 SUPERFAMILY SSF51735 2 112 5.18E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 SUPERFAMILY SSF53790 215 456 1.02E-79 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Pfam PF13241 Putative NAD(P)-binding 6 115 9.5E-26 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 SUPERFAMILY SSF75615 114 207 1.96E-26 T 22-04-2016 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.876 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 PANTHER PTHR21091 165 442 7.4E-85 T 22-04-2016 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 2.6E-50 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 3.1E-18 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 PIRSF PIRSF036426 1 457 1.1E-204 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS19325 a8601d72bf464660ee6889c34c901ee7 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 Gene3D G3DSA:3.40.50.2300 2 113 9.0E-23 T 22-04-2016 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 SMART SM00421 141 198 2.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 PANTHER PTHR26402:SF151 1 202 2.4E-47 T 22-04-2016 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 PANTHER PTHR26402 1 202 2.4E-47 T 22-04-2016 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 SUPERFAMILY SSF46894 134 202 1.73E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 198 5.0E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 Pfam PF00072 Response regulator receiver domain 4 114 4.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 Gene3D G3DSA:1.10.10.10 114 203 5.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 7.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 7.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 7.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 SUPERFAMILY SSF52172 1 124 1.85E-23 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS13360 0fc39431cf45f67ef9e76c9a1f225d7f 204 SMART SM00448 1 113 1.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 PIRSF PIRSF006092 1 157 1.3E-45 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 PANTHER PTHR30437 1 155 1.5E-92 T 22-04-2016 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 54.298 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 Pfam PF03449 Transcription elongation factor, N-terminal 6 74 6.5E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 SUPERFAMILY SSF54534 80 155 3.53E-20 T 22-04-2016 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 Gene3D G3DSA:3.10.50.30 76 155 6.9E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 28.83 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 SUPERFAMILY SSF46557 3 78 3.66E-28 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 PANTHER PTHR30437:SF6 1 155 1.5E-92 T 22-04-2016 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 1.1E-88 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 1.3E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APECO1_RS19490 b223466ef33eda5ba8926cac5d29793a 158 Gene3D G3DSA:1.10.287.180 1 75 5.8E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF07730 Histidine kinase 361 425 5.8E-19 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SUPERFAMILY SSF158472 176 225 3.66E-7 T 22-04-2016 APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 127 6.1E-22 T 22-04-2016 IPR029095 NarX-like, N-terminal APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Gene3D G3DSA:3.30.565.10 425 558 4.3E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 PANTHER PTHR24421 356 559 2.2E-288 T 22-04-2016 APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SMART SM00387 465 559 8.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 555 8.5E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 PANTHER PTHR24421:SF25 2 286 2.2E-288 T 22-04-2016 APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 PANTHER PTHR24421:SF25 356 559 2.2E-288 T 22-04-2016 APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 PANTHER PTHR24421 2 286 2.2E-288 T 22-04-2016 APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SUPERFAMILY SSF55874 424 555 3.41E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 SMART SM00304 174 227 2.5E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS13810 a5e1d627d5fdd03cf5d4c2ef878d7b4b 566 Pfam PF00672 HAMP domain 156 223 3.0E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS09700 6a36a06e430375d1c1b372aac45438db 454 Gene3D G3DSA:3.30.1330.90 10 158 2.2E-55 T 22-04-2016 IPR029009 Allosteric substrate binding domain APECO1_RS09700 6a36a06e430375d1c1b372aac45438db 454 PANTHER PTHR30182:SF4 2 454 0.0 T 22-04-2016 APECO1_RS09700 6a36a06e430375d1c1b372aac45438db 454 Pfam PF03315 Serine dehydratase beta chain 3 155 6.8E-57 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APECO1_RS09700 6a36a06e430375d1c1b372aac45438db 454 Pfam PF03313 Serine dehydratase alpha chain 186 448 7.5E-96 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APECO1_RS09700 6a36a06e430375d1c1b372aac45438db 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.4E-231 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APECO1_RS09700 6a36a06e430375d1c1b372aac45438db 454 SUPERFAMILY SSF143548 16 158 1.02E-46 T 22-04-2016 IPR029009 Allosteric substrate binding domain APECO1_RS09700 6a36a06e430375d1c1b372aac45438db 454 PANTHER PTHR30182 2 454 0.0 T 22-04-2016 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 SMART SM00938 4 105 4.1E-68 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 PANTHER PTHR30115 1 112 1.0E-67 T 22-04-2016 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 52 75 2.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 83 103 2.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 23 41 2.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 PRINTS PR00340 P-II protein signature 2 17 2.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 SUPERFAMILY SSF54913 1 112 8.58E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APECO1_RS14435 8ceb698f0aa0b9491fc60d01c78bde64 112 PIRSF PIRSF039144 1 112 9.6E-58 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.6E-12 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:1.20.150.20 383 510 3.6E-49 T 22-04-2016 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.4E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF52540 96 381 9.43E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF47917 383 511 4.19E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.882 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 PANTHER PTHR15184 1 496 1.6E-293 T 22-04-2016 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 PANTHER PTHR15184:SF3 1 496 1.6E-293 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.1E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:3.40.50.300 94 382 1.4E-113 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.6E-262 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 SUPERFAMILY SSF50615 10 94 2.55E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS21310 5eedc69dcc8a494aac3431061697c90c 513 Gene3D G3DSA:2.40.30.20 1 93 3.5E-29 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 SUPERFAMILY SSF54570 3 84 2.75E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 Pfam PF00203 Ribosomal protein S19 3 83 2.3E-36 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.549 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 PIRSF PIRSF002144 1 92 1.7E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 8.6E-46 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 PANTHER PTHR11880 1 92 8.1E-58 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 Gene3D G3DSA:3.30.860.10 1 91 8.0E-41 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.1E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.1E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19050 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.1E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 SMART SM01130 4 293 7.5E-88 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 PIRSF PIRSF001365 1 297 5.3E-85 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 52.009 T 22-04-2016 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|UniPathway: UPA00629 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 PANTHER PTHR12128:SF30 1 296 1.1E-156 T 22-04-2016 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 PANTHER PTHR12128 1 296 1.1E-156 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 Gene3D G3DSA:3.20.20.70 4 292 1.8E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 3.6E-113 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 SUPERFAMILY SSF51569 5 291 6.7E-82 T 22-04-2016 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.4E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.4E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.4E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.4E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APECO1_RS18540 8c6264609850a1927d3dae67989bc9cb 297 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 5 297 8.6E-173 T 22-04-2016 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|UniPathway: UPA00629 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 SUPERFAMILY SSF53732 10 625 3.14E-224 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 Gene3D G3DSA:3.30.499.10 22 249 2.2E-78 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PRINTS PR00415 Aconitase family signature 217 232 1.5E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PRINTS PR00415 Aconitase family signature 493 506 1.5E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PRINTS PR00415 Aconitase family signature 203 216 1.5E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PRINTS PR00415 Aconitase family signature 279 292 1.5E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PRINTS PR00415 Aconitase family signature 170 178 1.5E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PRINTS PR00415 Aconitase family signature 372 386 1.5E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PRINTS PR00415 Aconitase family signature 293 306 1.5E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PRINTS PR00415 Aconitase family signature 146 159 1.5E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PRINTS PR00415 Aconitase family signature 431 442 1.5E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 Gene3D G3DSA:3.40.1060.10 250 367 5.9E-37 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 Gene3D G3DSA:3.30.499.10 369 575 5.9E-62 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 Pfam PF00694 Aconitase C-terminal domain 691 818 4.8E-51 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 890 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 6.0E-183 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PANTHER PTHR11670:SF1 7 393 0.0 T 22-04-2016 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PANTHER PTHR11670:SF1 416 650 0.0 T 22-04-2016 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PANTHER PTHR11670:SF1 666 711 0.0 T 22-04-2016 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PANTHER PTHR11670:SF1 750 891 0.0 T 22-04-2016 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PANTHER PTHR11670 7 393 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PANTHER PTHR11670 416 650 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PANTHER PTHR11670 666 711 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 PANTHER PTHR11670 750 891 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 SUPERFAMILY SSF52016 630 890 3.92E-90 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS07080 eab93d8c72ffdd3102e71b6edca4767c 891 Gene3D G3DSA:3.20.19.10 636 890 2.1E-83 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 PANTHER PTHR30126:SF36 2 286 4.0E-203 T 22-04-2016 APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 SUPERFAMILY SSF53850 88 286 1.18E-49 T 22-04-2016 APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.3E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 Gene3D G3DSA:1.10.10.10 2 82 5.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 SUPERFAMILY SSF46785 2 109 2.18E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 Gene3D G3DSA:3.40.190.10 174 254 1.0E-19 T 22-04-2016 APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 Pfam PF03466 LysR substrate binding domain 86 286 1.0E-53 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 PANTHER PTHR30126 2 286 4.0E-203 T 22-04-2016 APECO1_RS12070 cc3e6fb6928dbf30678f50efdfaf37a0 293 Gene3D G3DSA:3.40.190.10 87 173 2.3E-18 T 22-04-2016 APECO1_RS10825 e9afc6528489177f5b1296eeded8dfe9 434 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 15 434 5.6E-206 T 22-04-2016 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00011 APECO1_RS10825 e9afc6528489177f5b1296eeded8dfe9 434 SUPERFAMILY SSF56322 10 432 5.1E-96 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS10825 e9afc6528489177f5b1296eeded8dfe9 434 PANTHER PTHR11236 20 434 1.9E-275 T 22-04-2016 APECO1_RS10825 e9afc6528489177f5b1296eeded8dfe9 434 Pfam PF00425 chorismate binding enzyme 173 424 7.0E-70 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APECO1_RS10825 e9afc6528489177f5b1296eeded8dfe9 434 Gene3D G3DSA:3.60.120.10 48 432 3.6E-85 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS10825 e9afc6528489177f5b1296eeded8dfe9 434 PANTHER PTHR11236:SF17 20 434 1.9E-275 T 22-04-2016 APECO1_RS25235 e0a32c662259682535aca273f7deb0c4 206 Pfam PF04448 Protein of unknown function (DUF551) 137 203 5.8E-17 T 22-04-2016 IPR007539 Domain of unknown function DUF551 APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 PANTHER PTHR24220:SF123 4 289 6.5E-144 T 22-04-2016 APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 Gene3D G3DSA:3.40.50.300 3 244 7.1E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 4.9E-129 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 SUPERFAMILY SSF50331 239 345 3.97E-14 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 SMART SM00382 27 214 3.2E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 Pfam PF00005 ABC transporter 18 164 4.8E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 Pfam PF12857 TOBE-like domain 289 339 8.5E-8 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 SUPERFAMILY SSF52540 3 244 9.13E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS13630 5c38bc291d192c3762cac45ffb7ddc12 365 PANTHER PTHR24220 4 289 6.5E-144 T 22-04-2016 APECO1_RS00755 de8784135cab509c03c31ce4d8808d75 862 Pfam PF00577 Outer membrane usher protein 196 768 3.4E-159 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS00755 de8784135cab509c03c31ce4d8808d75 862 Pfam PF13953 PapC C-terminal domain 777 840 2.7E-15 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APECO1_RS00755 de8784135cab509c03c31ce4d8808d75 862 PANTHER PTHR30451:SF1 1 862 0.0 T 22-04-2016 APECO1_RS00755 de8784135cab509c03c31ce4d8808d75 862 PANTHER PTHR30451 1 862 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS00755 de8784135cab509c03c31ce4d8808d75 862 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 308 318 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APECO1_RS00755 de8784135cab509c03c31ce4d8808d75 862 SUPERFAMILY SSF141729 30 156 2.09E-30 T 22-04-2016 APECO1_RS00755 de8784135cab509c03c31ce4d8808d75 862 Pfam PF13954 PapC N-terminal domain 31 182 2.0E-42 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 Gene3D G3DSA:2.30.40.10 31 125 1.0E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 SUPERFAMILY SSF51338 333 354 1.71E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 SUPERFAMILY SSF51338 22 85 1.71E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 Pfam PF13382 Adenine deaminase C-terminal domain 434 579 2.2E-56 T 22-04-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 SUPERFAMILY SSF51556 85 333 7.25E-27 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 Hamap MF_01518 Adenine deaminase [ade]. 31 583 35.981 T 22-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 TIGRFAM TIGR01178 ade: adenine deaminase 31 584 2.6E-252 T 22-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 Gene3D G3DSA:3.20.20.140 296 356 2.9E-7 T 22-04-2016 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 PANTHER PTHR11113 400 578 8.5E-231 T 22-04-2016 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 PANTHER PTHR11113 17 366 8.5E-231 T 22-04-2016 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 Pfam PF01979 Amidohydrolase family 82 362 2.3E-28 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 PANTHER PTHR11113:SF2 400 578 8.5E-231 T 22-04-2016 APECO1_RS20980 970d26c2028fd034c87bceb7d5dd4399 588 PANTHER PTHR11113:SF2 17 366 8.5E-231 T 22-04-2016 APECO1_RS23790 092db3c8248cd337e3f470f625e52b09 181 Pfam PF00936 BMC domain 5 80 6.6E-22 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS23790 092db3c8248cd337e3f470f625e52b09 181 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 2.0E-10 T 22-04-2016 APECO1_RS23790 092db3c8248cd337e3f470f625e52b09 181 SUPERFAMILY SSF143414 4 93 3.92E-23 T 22-04-2016 APECO1_RS23790 092db3c8248cd337e3f470f625e52b09 181 SMART SM00877 4 81 8.5E-28 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS23790 092db3c8248cd337e3f470f625e52b09 181 PANTHER PTHR33941 6 101 9.0E-27 T 22-04-2016 APECO1_RS05950 cfc230426809c42d142e7dd546ab3631 108 PRINTS PR01374 Gram-negative bacterial tonB protein signature 28 49 1.4E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APECO1_RS05950 cfc230426809c42d142e7dd546ab3631 108 PRINTS PR01374 Gram-negative bacterial tonB protein signature 49 67 1.4E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APECO1_RS05950 cfc230426809c42d142e7dd546ab3631 108 PRINTS PR01374 Gram-negative bacterial tonB protein signature 68 85 1.4E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APECO1_RS05950 cfc230426809c42d142e7dd546ab3631 108 PANTHER PTHR33446 20 89 1.1E-15 T 22-04-2016 APECO1_RS05950 cfc230426809c42d142e7dd546ab3631 108 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 34 104 5.1E-13 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 APECO1_RS05950 cfc230426809c42d142e7dd546ab3631 108 SUPERFAMILY SSF74653 25 90 8.37E-17 T 22-04-2016 APECO1_RS05950 cfc230426809c42d142e7dd546ab3631 108 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 33 93 5.2E-12 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 APECO1_RS05950 cfc230426809c42d142e7dd546ab3631 108 PANTHER PTHR33446:SF1 20 89 1.1E-15 T 22-04-2016 APECO1_RS05950 cfc230426809c42d142e7dd546ab3631 108 Gene3D G3DSA:3.30.1150.10 24 105 1.4E-9 T 22-04-2016 APECO1_RS11905 39afb12f8e36ff9141ee3713e61b64bd 35 Hamap MF_01362 UPF0387 membrane protein YohO [yohO]. 1 35 19.177 T 22-04-2016 IPR020870 Uncharacterised protein family UPF0387, membrane GO:0005886 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 SUPERFAMILY SSF63380 3 97 4.12E-23 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 SUPERFAMILY SSF52343 100 231 2.88E-36 T 22-04-2016 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 Gene3D G3DSA:2.40.30.10 3 98 1.9E-30 T 22-04-2016 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 5.3E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 PANTHER PTHR19370 4 233 1.9E-150 T 22-04-2016 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 5.5E-23 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 1.07E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.07E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 1.07E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 1.07E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.07E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 PANTHER PTHR19370:SF119 4 233 1.9E-150 T 22-04-2016 APECO1_RS21970 b6cb369f06acaecc00322377c74e9f11 233 Gene3D G3DSA:3.40.50.80 100 231 4.2E-39 T 22-04-2016 APECO1_RS23380 22322fc3b27a3b43cc88b66f969cd0a9 343 Pfam PF13533 Biotin-lipoyl like 49 96 1.2E-16 T 22-04-2016 APECO1_RS23380 22322fc3b27a3b43cc88b66f969cd0a9 343 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 10 340 2.2E-124 T 22-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 APECO1_RS23380 22322fc3b27a3b43cc88b66f969cd0a9 343 PANTHER PTHR30367:SF1 15 343 4.0E-95 T 22-04-2016 IPR030196 Multidrug resistance protein MdtN GO:0006855 APECO1_RS23380 22322fc3b27a3b43cc88b66f969cd0a9 343 Gene3D G3DSA:2.40.50.100 208 241 3.0E-17 T 22-04-2016 APECO1_RS23380 22322fc3b27a3b43cc88b66f969cd0a9 343 Gene3D G3DSA:2.40.50.100 48 81 3.0E-17 T 22-04-2016 APECO1_RS23380 22322fc3b27a3b43cc88b66f969cd0a9 343 SUPERFAMILY SSF111369 178 296 1.83E-9 T 22-04-2016 APECO1_RS23380 22322fc3b27a3b43cc88b66f969cd0a9 343 SUPERFAMILY SSF111369 45 102 6.67E-13 T 22-04-2016 APECO1_RS23380 22322fc3b27a3b43cc88b66f969cd0a9 343 PANTHER PTHR30367 15 343 4.0E-95 T 22-04-2016 APECO1_RS23380 22322fc3b27a3b43cc88b66f969cd0a9 343 Pfam PF13437 HlyD family secretion protein 210 293 8.0E-12 T 22-04-2016 APECO1_RS07405 6c9f48d892033943dba356ed7cdfcc13 342 PANTHER PTHR30386 1 342 7.9E-90 T 22-04-2016 APECO1_RS07405 6c9f48d892033943dba356ed7cdfcc13 342 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 289 3.4E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS07405 6c9f48d892033943dba356ed7cdfcc13 342 Pfam PF00529 HlyD membrane-fusion protein of T1SS 21 340 3.8E-8 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS07405 6c9f48d892033943dba356ed7cdfcc13 342 Gene3D G3DSA:2.40.50.100 47 79 4.7E-17 T 22-04-2016 APECO1_RS07405 6c9f48d892033943dba356ed7cdfcc13 342 Gene3D G3DSA:2.40.50.100 210 243 4.7E-17 T 22-04-2016 APECO1_RS07405 6c9f48d892033943dba356ed7cdfcc13 342 SUPERFAMILY SSF111369 189 274 2.35E-18 T 22-04-2016 APECO1_RS07405 6c9f48d892033943dba356ed7cdfcc13 342 SUPERFAMILY SSF111369 46 101 2.35E-18 T 22-04-2016 APECO1_RS07405 6c9f48d892033943dba356ed7cdfcc13 342 SUPERFAMILY SSF111369 137 153 2.35E-18 T 22-04-2016 APECO1_RS07405 6c9f48d892033943dba356ed7cdfcc13 342 PANTHER PTHR30386:SF7 1 342 7.9E-90 T 22-04-2016 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 Pfam PF02503 Polyphosphate kinase middle domain 119 319 1.4E-41 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 SUPERFAMILY SSF143724 107 313 1.43E-59 T 22-04-2016 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 PANTHER PTHR30218:SF0 1 688 0.0 T 22-04-2016 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 3.6E-143 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 SUPERFAMILY SSF56024 320 499 1.48E-56 T 22-04-2016 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 3.0E-31 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 PIRSF PIRSF015589 1 688 6.3E-240 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 Gene3D G3DSA:3.30.870.10 502 685 7.4E-67 T 22-04-2016 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 679 3.5E-257 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 PANTHER PTHR30218 1 688 0.0 T 22-04-2016 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 Gene3D G3DSA:3.30.870.10 327 501 1.4E-74 T 22-04-2016 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 683 36.345 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 Gene3D G3DSA:3.30.1840.10 106 300 9.2E-52 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 SUPERFAMILY SSF140356 3 105 8.11E-34 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APECO1_RS13925 fef7d61148ba4ef64a1d1417e8547f3c 688 SUPERFAMILY SSF56024 503 685 2.92E-68 T 22-04-2016 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 Pfam PF00771 FHIPEP family 31 680 1.0E-269 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 22-04-2016 IPR025505 FHIPEP conserved site APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 4.5E-286 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 PIRSF PIRSF005419 9 692 1.4E-243 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 PANTHER PTHR30161:SF1 2 692 0.0 T 22-04-2016 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 PANTHER PTHR30161 2 692 0.0 T 22-04-2016 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS10055 420e2ac25aa3f860146cc0e717be250d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 Gene3D G3DSA:2.40.50.100 1 96 7.6E-26 T 22-04-2016 APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 Pfam PF02817 e3 binding domain 114 147 2.4E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 SUPERFAMILY SSF52777 175 404 3.78E-90 T 22-04-2016 APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 Gene3D G3DSA:3.30.559.10 163 403 9.3E-93 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 SUPERFAMILY SSF51230 2 95 3.14E-24 T 22-04-2016 IPR011053 Single hybrid motif APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 Gene3D G3DSA:4.10.320.10 114 152 3.6E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 Pfam PF00364 Biotin-requiring enzyme 5 76 4.2E-17 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 403 1.9E-82 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 SUPERFAMILY SSF47005 106 151 1.83E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 PANTHER PTHR23151:SF47 4 405 6.3E-250 T 22-04-2016 APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 405 1.9E-195 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APECO1_RS03500 16e793955d55da8159bafa7a55bbb2ee 405 PANTHER PTHR23151 4 405 6.3E-250 T 22-04-2016 APECO1_RS27480 e20549a16586bb252c26c72076d2b726 161 Pfam PF00912 Transglycosylase 3 137 1.4E-43 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APECO1_RS27480 e20549a16586bb252c26c72076d2b726 161 PANTHER PTHR32282:SF11 1 161 1.7E-91 T 22-04-2016 APECO1_RS27480 e20549a16586bb252c26c72076d2b726 161 PANTHER PTHR32282 1 161 1.7E-91 T 22-04-2016 APECO1_RS27480 e20549a16586bb252c26c72076d2b726 161 SUPERFAMILY SSF53955 2 159 1.46E-52 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS27480 e20549a16586bb252c26c72076d2b726 161 Gene3D G3DSA:1.10.3810.10 3 150 7.2E-52 T 22-04-2016 APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 Gene3D G3DSA:3.40.50.720 1 162 1.6E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 5.1E-19 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 SMART SM00859 3 146 7.2E-53 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 2.1E-123 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 Gene3D G3DSA:3.30.360.10 163 308 4.1E-47 T 22-04-2016 APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 PANTHER PTHR32338 1 334 2.7E-160 T 22-04-2016 APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 SUPERFAMILY SSF55347 154 308 3.64E-48 T 22-04-2016 APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 2.8E-32 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 SUPERFAMILY SSF51735 1 170 3.77E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22580 0f2d68d44c0f3d775f7f791d861ef7d0 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.946 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS07920 fcf8050796e1f3c3a460b3fa6aa61ff4 447 PANTHER PTHR39479 1 447 1.3E-298 T 22-04-2016 APECO1_RS07920 fcf8050796e1f3c3a460b3fa6aa61ff4 447 Pfam PF07063 Domain of unknown function (DUF1338) 9 401 1.7E-120 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 APECO1_RS07920 fcf8050796e1f3c3a460b3fa6aa61ff4 447 SMART SM01150 11 401 3.2E-230 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 APECO1_RS07920 fcf8050796e1f3c3a460b3fa6aa61ff4 447 PANTHER PTHR39479:SF2 1 447 1.3E-298 T 22-04-2016 APECO1_RS16820 e1a179304fb08db68713be56cfcd2783 499 Pfam PF08019 Domain of unknown function (DUF1705) 44 172 3.8E-6 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 APECO1_RS16820 e1a179304fb08db68713be56cfcd2783 499 PANTHER PTHR30443 87 495 8.4E-162 T 22-04-2016 APECO1_RS16820 e1a179304fb08db68713be56cfcd2783 499 PANTHER PTHR30443:SF4 87 495 8.4E-162 T 22-04-2016 APECO1_RS16820 e1a179304fb08db68713be56cfcd2783 499 SUPERFAMILY SSF53649 194 459 4.19E-19 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS16820 e1a179304fb08db68713be56cfcd2783 499 Pfam PF00884 Sulfatase 193 445 1.2E-28 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS16820 e1a179304fb08db68713be56cfcd2783 499 Gene3D G3DSA:3.40.720.10 257 444 2.0E-9 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS05350 5af841e045682f26b4c0ce5b97d1f90f 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 8.0E-45 T 22-04-2016 IPR025730 Biofilm regulator BssS APECO1_RS05350 5af841e045682f26b4c0ce5b97d1f90f 84 Pfam PF13991 BssS protein family 11 80 2.1E-32 T 22-04-2016 IPR025730 Biofilm regulator BssS APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 Gene3D G3DSA:3.30.365.10 452 606 2.4E-40 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 SMART SM01008 23 139 3.3E-45 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 SUPERFAMILY SSF54665 5 158 1.03E-39 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 SUPERFAMILY SSF56003 143 757 1.7E-177 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 PANTHER PTHR11908:SF95 2 568 0.0 T 22-04-2016 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 PANTHER PTHR11908:SF95 587 765 0.0 T 22-04-2016 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 Gene3D G3DSA:3.90.1170.50 4 127 3.0E-40 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 Gene3D G3DSA:3.30.365.10 181 287 6.3E-35 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 Gene3D G3DSA:3.30.365.10 128 180 3.8E-29 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 Gene3D G3DSA:3.30.365.10 289 363 3.8E-29 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 Gene3D G3DSA:3.30.365.10 365 451 1.2E-63 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 Gene3D G3DSA:3.30.365.10 616 757 1.2E-63 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 PANTHER PTHR11908 2 568 0.0 T 22-04-2016 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 PANTHER PTHR11908 587 765 0.0 T 22-04-2016 APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 139 6.2E-36 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APECO1_RS16285 32f5575ef1f611ffb89b343880763a9a 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 159 700 2.5E-161 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS24215 cc0fe12bf30642df7d3d635784fe57c9 181 SMART SM00479 7 180 1.2E-21 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS24215 cc0fe12bf30642df7d3d635784fe57c9 181 PANTHER PTHR11046 3 181 2.5E-129 T 22-04-2016 APECO1_RS24215 cc0fe12bf30642df7d3d635784fe57c9 181 PANTHER PTHR11046:SF1 3 181 2.5E-129 T 22-04-2016 APECO1_RS24215 cc0fe12bf30642df7d3d635784fe57c9 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 45.336 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 APECO1_RS24215 cc0fe12bf30642df7d3d635784fe57c9 181 Pfam PF00929 Exonuclease 9 170 2.2E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS24215 cc0fe12bf30642df7d3d635784fe57c9 181 Gene3D G3DSA:3.30.420.10 4 180 4.3E-72 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS24215 cc0fe12bf30642df7d3d635784fe57c9 181 SUPERFAMILY SSF53098 3 180 3.89E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 Pfam PF02901 Pyruvate formate lyase-like 10 711 1.7E-257 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 PANTHER PTHR30191 662 850 1.0E-243 T 22-04-2016 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 PANTHER PTHR30191 10 599 1.0E-243 T 22-04-2016 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 PANTHER PTHR30191:SF6 662 850 1.0E-243 T 22-04-2016 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 PANTHER PTHR30191:SF6 10 599 1.0E-243 T 22-04-2016 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 Gene3D G3DSA:3.20.70.20 660 848 2.3E-285 T 22-04-2016 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 Gene3D G3DSA:3.20.70.20 6 590 2.3E-285 T 22-04-2016 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 Pfam PF01228 Glycine radical 728 830 2.0E-31 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 SUPERFAMILY SSF51998 649 848 6.1E-260 T 22-04-2016 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 SUPERFAMILY SSF51998 3 586 6.1E-260 T 22-04-2016 APECO1_RS23835 21023fbf14a2372403d1af7b3357aaac 850 ProSitePatterns PS00850 Glycine radical domain signature. 820 828 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APECO1_RS23690 085ce5e5c3b59a5e00b7b3eba2cdb4a6 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 8.7E-36 T 22-04-2016 IPR009329 Protein of unknown function DUF987 APECO1_RS23690 085ce5e5c3b59a5e00b7b3eba2cdb4a6 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 4.0E-32 T 22-04-2016 IPR009329 Protein of unknown function DUF987 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 7 153 9.3E-44 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 6 157 1.6E-60 T 22-04-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 PANTHER PTHR30302 1 168 9.8E-144 T 22-04-2016 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 Pfam PF01750 Hydrogenase maturation protease 23 151 1.1E-39 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 Gene3D G3DSA:3.40.50.1450 5 164 1.6E-49 T 22-04-2016 IPR023430 Peptidase HybD-like domain APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 SUPERFAMILY SSF53163 5 163 6.8E-44 T 22-04-2016 IPR023430 Peptidase HybD-like domain APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 PANTHER PTHR30302:SF6 1 168 9.8E-144 T 22-04-2016 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 PRINTS PR00446 Hydrogen uptake protein signature 6 18 3.1E-30 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 PRINTS PR00446 Hydrogen uptake protein signature 38 55 3.1E-30 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 PRINTS PR00446 Hydrogen uptake protein signature 18 29 3.1E-30 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 PRINTS PR00446 Hydrogen uptake protein signature 59 69 3.1E-30 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS04965 d28f1651425fbbf3d7e2ddf700520fa3 195 PRINTS PR00446 Hydrogen uptake protein signature 70 86 3.1E-30 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APECO1_RS10950 dc84ed6dedea2eda49609a9f68f5d26a 359 Gene3D G3DSA:1.10.1610.10 1 73 2.3E-30 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APECO1_RS10950 dc84ed6dedea2eda49609a9f68f5d26a 359 Pfam PF02277 Phosphoribosyltransferase 11 345 5.9E-119 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APECO1_RS10950 dc84ed6dedea2eda49609a9f68f5d26a 359 PANTHER PTHR21712:SF4 4 350 5.2E-124 T 22-04-2016 APECO1_RS10950 dc84ed6dedea2eda49609a9f68f5d26a 359 Gene3D G3DSA:3.40.50.10210 74 330 3.9E-103 T 22-04-2016 APECO1_RS10950 dc84ed6dedea2eda49609a9f68f5d26a 359 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 349 34.042 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APECO1_RS10950 dc84ed6dedea2eda49609a9f68f5d26a 359 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 346 9.4E-118 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APECO1_RS10950 dc84ed6dedea2eda49609a9f68f5d26a 359 SUPERFAMILY SSF52733 6 344 2.22E-112 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APECO1_RS10950 dc84ed6dedea2eda49609a9f68f5d26a 359 PANTHER PTHR21712 4 350 5.2E-124 T 22-04-2016 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 Gene3D G3DSA:3.90.1170.10 22 133 8.3E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.9E-59 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 6.4E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 SUPERFAMILY SSF54686 3 133 9.16E-55 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 PANTHER PTHR12220 1 136 5.1E-76 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APECO1_RS19035 159e6ede332e7763b3b56f0b925339f5 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.018 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 Gene3D G3DSA:3.40.50.720 1 127 4.0E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 2.8E-46 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 SMART SM00881 9 104 1.9E-24 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 SUPERFAMILY SSF51735 2 136 2.83E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 Pfam PF00583 Acetyltransferase (GNAT) family 790 863 4.8E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 SUPERFAMILY SSF56059 481 687 1.3E-27 T 22-04-2016 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 PANTHER PTHR33303 456 695 2.5E-255 T 22-04-2016 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 PANTHER PTHR33303 6 426 2.5E-255 T 22-04-2016 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 SUPERFAMILY SSF55729 707 866 4.88E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 Gene3D G3DSA:3.40.50.261 128 279 3.8E-24 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 Gene3D G3DSA:3.40.50.261 280 439 1.8E-15 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 SUPERFAMILY SSF52210 287 447 6.41E-38 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 Gene3D G3DSA:3.30.470.20 488 589 4.5E-5 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 Pfam PF13380 CoA binding domain 13 129 2.4E-21 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 SUPERFAMILY SSF52210 125 286 9.68E-36 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 PANTHER PTHR33303:SF3 456 695 2.5E-255 T 22-04-2016 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 PANTHER PTHR33303:SF3 6 426 2.5E-255 T 22-04-2016 APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 Gene3D G3DSA:3.40.630.30 718 877 4.7E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS14610 568336b7af9d0b0782987d369dfeccd4 886 Pfam PF13549 ATP-grasp domain 473 694 2.5E-74 T 22-04-2016 APECO1_RS19780 c8ca733c19981b54fe53d76acdc02ffc 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 6.6E-71 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS19780 c8ca733c19981b54fe53d76acdc02ffc 308 PANTHER PTHR11795:SF371 7 308 4.9E-150 T 22-04-2016 APECO1_RS19780 c8ca733c19981b54fe53d76acdc02ffc 308 PANTHER PTHR11795 7 308 4.9E-150 T 22-04-2016 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 PANTHER PTHR11958 10 414 1.0E-270 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 3.6E-11 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 3.6E-11 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 3.6E-11 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 PRINTS PR00173 Glutamate-aspartate symporter signature 16 36 3.6E-11 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 6 407 35.738 T 22-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 Gene3D G3DSA:1.10.3860.10 12 404 1.1E-84 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 SUPERFAMILY SSF118215 18 400 1.7E-94 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 PANTHER PTHR11958:SF68 10 414 1.0E-270 T 22-04-2016 APECO1_RS17945 09b981671855ac0f36fea9ad61273f02 414 Pfam PF00375 Sodium:dicarboxylate symporter family 18 397 1.6E-62 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 SMART SM00986 49 210 6.6E-42 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 PANTHER PTHR11264:SF10 1 229 6.3E-179 T 22-04-2016 APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 2.9E-28 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 1.5E-90 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.427 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 Gene3D G3DSA:3.40.470.10 6 221 4.0E-102 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 PANTHER PTHR11264 1 229 6.3E-179 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 SUPERFAMILY SSF52141 6 220 8.5E-96 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 APECO1_RS14585 35d7a2d10b951f150980061bac641849 229 SMART SM00987 49 210 6.6E-42 T 22-04-2016 APECO1_RS16005 72907a3e12c34593cba61b17d551d080 388 SUPERFAMILY SSF53474 27 39 1.77E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS16005 72907a3e12c34593cba61b17d551d080 388 SUPERFAMILY SSF53474 197 280 1.77E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS16005 72907a3e12c34593cba61b17d551d080 388 Pfam PF07819 PGAP1-like protein 227 262 3.6E-6 T 22-04-2016 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 APECO1_RS16005 72907a3e12c34593cba61b17d551d080 388 Gene3D G3DSA:3.40.50.1820 185 299 4.8E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS16005 72907a3e12c34593cba61b17d551d080 388 Gene3D G3DSA:3.40.50.1820 26 37 4.8E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS15390 38defd9fb751e2ec03f2e8c87ad55a28 319 PANTHER PTHR39427 1 319 6.8E-126 T 22-04-2016 APECO1_RS15390 38defd9fb751e2ec03f2e8c87ad55a28 319 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 3 319 3.7E-189 T 22-04-2016 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 APECO1_RS15390 38defd9fb751e2ec03f2e8c87ad55a28 319 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 171 1.1E-67 T 22-04-2016 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 APECO1_RS15390 38defd9fb751e2ec03f2e8c87ad55a28 319 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 226 318 5.7E-43 T 22-04-2016 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 SUPERFAMILY SSF53474 1050 1291 6.88E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 SUPERFAMILY SSF56801 428 989 7.33E-149 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 SUPERFAMILY SSF52777 190 426 2.67E-32 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 SMART SM00824 Thioesterase 1069 1245 5.6E-4 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 482 886 3.0E-127 T 22-04-2016 IPR010071 Amino acid adenylation domain APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 SUPERFAMILY SSF47336 971 1042 1.44E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Gene3D G3DSA:3.40.50.980 622 775 4.2E-44 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Gene3D G3DSA:3.40.50.1820 1051 1170 5.1E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Gene3D G3DSA:3.40.50.1820 1225 1292 5.1E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Gene3D G3DSA:3.30.300.30 857 964 1.6E-28 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Gene3D G3DSA:2.30.38.10 776 853 1.6E-26 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 PANTHER PTHR24095:SF137 1075 1108 0.0 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 PANTHER PTHR24095:SF137 1 1047 0.0 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Pfam PF00501 AMP-binding enzyme 462 863 3.9E-97 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 PANTHER PTHR24095 1075 1108 0.0 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 PANTHER PTHR24095 1 1047 0.0 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Pfam PF00550 Phosphopantetheine attachment site 980 1040 1.1E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Pfam PF00668 Condensation domain 2 300 1.1E-73 T 22-04-2016 IPR001242 Condensation domain APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Pfam PF00975 Thioesterase domain 1067 1279 2.7E-48 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 SMART SM00823 Phosphopantetheine attachment site 977 1046 0.0019 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Gene3D G3DSA:3.40.50.980 454 621 5.5E-44 T 22-04-2016 APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 Gene3D G3DSA:1.10.1200.10 966 1047 6.9E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site APECO1_RS02850 f0792f218f8fb6172c6fd0e6d2d74ba8 1293 SUPERFAMILY SSF52777 9 183 4.0E-32 T 22-04-2016 APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 SUPERFAMILY SSF51735 151 312 8.2E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 Gene3D G3DSA:3.40.50.720 183 292 5.6E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 SUPERFAMILY SSF50129 4 172 1.35E-49 T 22-04-2016 IPR011032 GroES-like APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 Gene3D G3DSA:3.90.180.10 1 182 5.1E-63 T 22-04-2016 IPR011032 GroES-like APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 SMART SM00829 7 289 1.6E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 142 9.2E-27 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 178 205 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 Pfam PF00107 Zinc-binding dehydrogenase 185 308 3.5E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 PANTHER PTHR11695:SF261 15 349 3.9E-163 T 22-04-2016 APECO1_RS01760 b985d4fc0730c48fd780c021b2b51abb 349 PANTHER PTHR11695 15 349 3.9E-163 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 Pfam PF00753 Metallo-beta-lactamase superfamily 129 355 5.3E-50 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 Gene3D G3DSA:3.60.15.10 262 385 2.4E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 Gene3D G3DSA:3.60.15.10 118 219 2.4E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 Gene3D G3DSA:3.30.1050.10 546 643 2.1E-5 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 SMART SM00849 133 355 1.1E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 SUPERFAMILY SSF55718 541 660 4.41E-29 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 Pfam PF14863 Alkyl sulfatase dimerisation 392 530 4.3E-55 T 22-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 SUPERFAMILY SSF56281 33 533 2.8E-149 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 PANTHER PTHR11935:SF93 84 221 6.5E-188 T 22-04-2016 APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 PANTHER PTHR11935:SF93 245 480 6.5E-188 T 22-04-2016 APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 Pfam PF14864 Alkyl sulfatase C-terminal 539 660 3.1E-33 T 22-04-2016 IPR029229 Alkyl sulfatase, C-terminal APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 PANTHER PTHR11935 84 221 6.5E-188 T 22-04-2016 APECO1_RS23390 fc92fffbe95d15c29c82c4947472550f 661 PANTHER PTHR11935 245 480 6.5E-188 T 22-04-2016 APECO1_RS15250 e5fa8df3fa494c134fc05e21037b1ad2 354 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 163 324 6.1E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS15250 e5fa8df3fa494c134fc05e21037b1ad2 354 SUPERFAMILY SSF161098 142 324 6.93E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS15250 e5fa8df3fa494c134fc05e21037b1ad2 354 Gene3D G3DSA:1.10.3720.10 140 325 1.3E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS15250 e5fa8df3fa494c134fc05e21037b1ad2 354 PANTHER PTHR30177 60 344 6.9E-142 T 22-04-2016 APECO1_RS15250 e5fa8df3fa494c134fc05e21037b1ad2 354 PANTHER PTHR30177:SF2 60 344 6.9E-142 T 22-04-2016 APECO1_RS00205 6ad8018090be100ce52c13563f94d387 196 Gene3D G3DSA:2.160.10.10 4 166 1.7E-38 T 22-04-2016 APECO1_RS00205 6ad8018090be100ce52c13563f94d387 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 41 2.5E-5 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00205 6ad8018090be100ce52c13563f94d387 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 1.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00205 6ad8018090be100ce52c13563f94d387 196 SUPERFAMILY SSF51161 3 167 4.02E-41 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS00205 6ad8018090be100ce52c13563f94d387 196 PANTHER PTHR13061 5 185 9.7E-62 T 22-04-2016 APECO1_RS00205 6ad8018090be100ce52c13563f94d387 196 Hamap MF_01525 Carnitine operon protein CaiE [caiE]. 1 196 66.097 T 22-04-2016 IPR023446 Carnitine operon protein CaiE UniPathway: UPA00117 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 SUPERFAMILY SSF55120 95 316 1.76E-67 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 SUPERFAMILY SSF55174 19 70 4.56E-9 T 22-04-2016 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 SMART SM00363 20 79 9.9E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 Pfam PF00849 RNA pseudouridylate synthase 101 249 1.3E-29 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 PANTHER PTHR11079:SF84 1 317 7.1E-167 T 22-04-2016 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 PANTHER PTHR11079 1 317 7.1E-167 T 22-04-2016 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 Gene3D G3DSA:3.10.290.10 20 68 1.5E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 316 1.3E-101 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS05480 3a515f0a14370df3c1280722b9a64586 319 Pfam PF01479 S4 domain 20 66 1.7E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS19905 6e510d9e3e0e790b0efe1e66eda22a75 195 Gene3D G3DSA:3.90.470.20 100 145 3.9E-15 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS19905 6e510d9e3e0e790b0efe1e66eda22a75 195 SUPERFAMILY SSF56214 87 180 1.83E-16 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS19905 6e510d9e3e0e790b0efe1e66eda22a75 195 SUPERFAMILY SSF56214 29 79 3.82E-10 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS19905 6e510d9e3e0e790b0efe1e66eda22a75 195 PANTHER PTHR12215 1 181 2.3E-44 T 22-04-2016 APECO1_RS19905 6e510d9e3e0e790b0efe1e66eda22a75 195 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 88 169 3.0E-9 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS19905 6e510d9e3e0e790b0efe1e66eda22a75 195 Gene3D G3DSA:3.90.470.20 31 99 1.4E-13 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS08170 1a4b9be025becb4d2c64c1324b8629c9 217 PANTHER PTHR30074:SF5 1 216 1.3E-142 T 22-04-2016 APECO1_RS08170 1a4b9be025becb4d2c64c1324b8629c9 217 Gene3D G3DSA:1.20.950.20 1 214 1.8E-75 T 22-04-2016 APECO1_RS08170 1a4b9be025becb4d2c64c1324b8629c9 217 Pfam PF01292 Prokaryotic cytochrome b561 13 186 2.4E-18 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APECO1_RS08170 1a4b9be025becb4d2c64c1324b8629c9 217 SUPERFAMILY SSF81342 3 212 2.82E-54 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APECO1_RS08170 1a4b9be025becb4d2c64c1324b8629c9 217 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 5.1E-69 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 APECO1_RS08170 1a4b9be025becb4d2c64c1324b8629c9 217 PANTHER PTHR30074 1 216 1.3E-142 T 22-04-2016 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.848 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 PANTHER PTHR22976 6 346 8.7E-203 T 22-04-2016 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.7E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.3E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 PIRSF PIRSF001619 1 319 7.0E-141 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 Pfam PF04055 Radical SAM superfamily 50 203 6.5E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 SUPERFAMILY SSF102114 6 313 1.57E-95 T 22-04-2016 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 PANTHER PTHR22976:SF1 6 346 8.7E-203 T 22-04-2016 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 SMART SM00876 220 312 6.8E-49 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 Gene3D G3DSA:3.20.20.70 6 314 1.0E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS03750 8d228422e8e573c3ca46317aa66388ac 346 SMART SM00729 43 255 2.6E-43 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 PANTHER PTHR10799:SF750 286 407 4.1E-29 T 22-04-2016 APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 PANTHER PTHR10799:SF750 1 37 4.1E-29 T 22-04-2016 APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 SUPERFAMILY SSF55785 148 250 5.76E-15 T 22-04-2016 IPR000014 PAS domain APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 SMART SM00091 129 198 0.0039 T 22-04-2016 IPR000014 PAS domain APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 SMART SM00091 3 70 2.9 T 22-04-2016 IPR000014 PAS domain APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 Gene3D G3DSA:3.30.70.270 254 408 8.4E-47 T 22-04-2016 APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 Pfam PF08448 PAS fold 142 244 3.4E-8 T 22-04-2016 IPR013656 PAS fold-4 APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 SUPERFAMILY SSF55073 258 408 3.22E-43 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 408 2.0E-44 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 Gene3D G3DSA:3.30.450.20 126 240 2.9E-11 T 22-04-2016 APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 SMART SM00267 242 410 4.2E-66 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 PANTHER PTHR10799 286 407 4.1E-29 T 22-04-2016 APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 PANTHER PTHR10799 1 37 4.1E-29 T 22-04-2016 APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 249 1.6E-12 T 22-04-2016 IPR000014 PAS domain APECO1_RS07420 32bfa09989ecf48cefb92050cca3327b 410 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.2E-45 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS10120 7f806aa4d5cc9a3a755ef1ace640419b 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 4.4E-41 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 APECO1_RS10120 7f806aa4d5cc9a3a755ef1ace640419b 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 98 5.0E-47 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 APECO1_RS10120 7f806aa4d5cc9a3a755ef1ace640419b 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.278 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 APECO1_RS10120 7f806aa4d5cc9a3a755ef1ace640419b 116 SUPERFAMILY SSF63592 1 98 1.23E-39 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 APECO1_RS04810 71b5d725e30fc27fe3de12b5148455da 180 PIRSF PIRSF010252 1 179 4.9E-67 T 22-04-2016 IPR009809 Cell division protein ZapC APECO1_RS04810 71b5d725e30fc27fe3de12b5148455da 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 40.085 T 22-04-2016 IPR009809 Cell division protein ZapC APECO1_RS04810 71b5d725e30fc27fe3de12b5148455da 180 Pfam PF07126 Cell-division protein ZapC 3 168 1.6E-68 T 22-04-2016 IPR009809 Cell division protein ZapC APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 644 1.5E-266 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 PANTHER PTHR32331 8 725 0.0 T 22-04-2016 APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 Pfam PF11842 Domain of unknown function (DUF3362) 594 726 5.3E-45 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 Pfam PF04055 Radical SAM superfamily 380 585 1.5E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 Pfam PF08497 Radical SAM N-terminal 29 379 4.0E-146 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 Gene3D G3DSA:3.80.30.20 374 642 3.4E-47 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 PANTHER PTHR32331:SF3 8 725 0.0 T 22-04-2016 APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 28 693 50.074 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 SUPERFAMILY SSF102114 377 440 1.18E-10 T 22-04-2016 APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 SUPERFAMILY SSF102114 470 624 1.18E-10 T 22-04-2016 APECO1_RS17505 fc2c0561729743e81bebacbedef44057 739 SMART SM00729 376 623 4.1E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS09875 31064f5e770b03f25ececcfcbfe7f608 220 SMART SM00479 1 156 7.0E-40 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS09875 31064f5e770b03f25ececcfcbfe7f608 220 SUPERFAMILY SSF53098 4 183 1.87E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS09875 31064f5e770b03f25ececcfcbfe7f608 220 PANTHER PTHR30231 4 210 6.4E-49 T 22-04-2016 APECO1_RS09875 31064f5e770b03f25ececcfcbfe7f608 220 Gene3D G3DSA:3.30.420.10 4 152 4.3E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS09875 31064f5e770b03f25ececcfcbfe7f608 220 Pfam PF00929 Exonuclease 4 147 1.7E-14 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 SUPERFAMILY SSF55021 280 377 7.94E-22 T 22-04-2016 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 PANTHER PTHR21022:SF0 4 379 2.0E-161 T 22-04-2016 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 8.9E-42 T 22-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 Gene3D G3DSA:3.30.70.260 294 378 1.4E-25 T 22-04-2016 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 Gene3D G3DSA:1.20.59.10 1 106 5.2E-46 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 SUPERFAMILY SSF48600 6 93 1.41E-22 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 Gene3D G3DSA:3.40.190.10 107 193 5.8E-33 T 22-04-2016 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 SUPERFAMILY SSF53850 105 291 3.58E-55 T 22-04-2016 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 PANTHER PTHR21022 4 379 2.0E-161 T 22-04-2016 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 Pfam PF00800 Prephenate dehydratase 106 286 5.4E-61 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 PIRSF PIRSF001500 1 380 2.5E-145 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 SMART SM00830 11 91 1.0E-24 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 Gene3D G3DSA:3.40.190.10 194 268 3.7E-28 T 22-04-2016 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APECO1_RS14725 d2c989ccb5a2163405b9331c7d17dd24 386 Pfam PF01817 Chorismate mutase type II 11 89 5.9E-17 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APECO1_RS17620 4c76c9a4cd7bac5ad347c663c0fe315b 349 Gene3D G3DSA:1.10.3470.10 24 347 1.0E-86 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS17620 4c76c9a4cd7bac5ad347c663c0fe315b 349 Pfam PF01032 FecCD transport family 37 343 6.0E-78 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS17620 4c76c9a4cd7bac5ad347c663c0fe315b 349 PANTHER PTHR30472 20 349 1.2E-83 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS17620 4c76c9a4cd7bac5ad347c663c0fe315b 349 SUPERFAMILY SSF81345 19 344 1.57E-68 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 Gene3D G3DSA:3.40.50.720 2 113 3.3E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 PANTHER PTHR10996:SF118 1 324 8.1E-157 T 22-04-2016 APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 SUPERFAMILY SSF52283 1 133 2.46E-28 T 22-04-2016 APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 76.168 T 22-04-2016 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 2.7E-62 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 SUPERFAMILY SSF51735 100 288 8.78E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 Gene3D G3DSA:3.40.50.720 114 287 1.6E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.3E-30 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APECO1_RS20380 3db9bce2a405f5ba954a7f1d9ee2c366 324 PANTHER PTHR10996 1 324 8.1E-157 T 22-04-2016 APECO1_RS17525 8d4eaf180b40c765630f1aaba2f55f14 336 PANTHER PTHR11091:SF0 3 335 1.1E-111 T 22-04-2016 APECO1_RS17525 8d4eaf180b40c765630f1aaba2f55f14 336 SUPERFAMILY SSF89733 4 335 4.71E-102 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS17525 8d4eaf180b40c765630f1aaba2f55f14 336 Gene3D G3DSA:1.10.1530.10 4 73 1.7E-25 T 22-04-2016 APECO1_RS17525 8d4eaf180b40c765630f1aaba2f55f14 336 Gene3D G3DSA:3.30.1370.60 74 274 2.8E-74 T 22-04-2016 APECO1_RS17525 8d4eaf180b40c765630f1aaba2f55f14 336 PANTHER PTHR11091 3 335 1.1E-111 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS17525 8d4eaf180b40c765630f1aaba2f55f14 336 Pfam PF02615 Malate/L-lactate dehydrogenase 6 333 1.9E-106 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 SUPERFAMILY SSF141371 695 779 2.16E-8 T 22-04-2016 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PRINTS PR01439 Cellulose synthase subunit A signature 227 252 7.7E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PRINTS PR01439 Cellulose synthase subunit A signature 199 219 7.7E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PRINTS PR01439 Cellulose synthase subunit A signature 524 550 7.7E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PRINTS PR01439 Cellulose synthase subunit A signature 363 387 7.7E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PRINTS PR01439 Cellulose synthase subunit A signature 593 612 7.7E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PRINTS PR01439 Cellulose synthase subunit A signature 282 301 7.7E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PRINTS PR01439 Cellulose synthase subunit A signature 553 572 7.7E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PRINTS PR01439 Cellulose synthase subunit A signature 667 688 7.7E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PANTHER PTHR10587:SF94 179 718 1.2E-143 T 22-04-2016 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 SUPERFAMILY SSF53448 275 553 1.91E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 Pfam PF00535 Glycosyl transferase family 2 276 446 1.1E-34 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 Pfam PF07238 PilZ domain 694 790 6.0E-13 T 22-04-2016 IPR009875 PilZ domain GO:0035438 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 Gene3D G3DSA:3.90.550.10 273 507 1.1E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 Pfam PF03552 Cellulose synthase 451 664 1.5E-12 T 22-04-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 PANTHER PTHR10587 179 718 1.2E-143 T 22-04-2016 APECO1_RS20245 c636a798e0dc54b5558feb06ad8cb16a 872 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 147 830 0.0 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APECO1_RS22365 f485f7b3e50eb187960be6c664790d04 199 Pfam PF07305 Protein of unknown function (DUF1454) 9 192 2.8E-86 T 22-04-2016 IPR009918 Protein of unknown function DUF1454 APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 PANTHER PTHR30363:SF15 1 257 6.1E-162 T 22-04-2016 APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 Pfam PF00455 DeoR C terminal sensor domain 74 231 7.5E-52 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 SMART SM00420 6 58 3.9E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.1E-21 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 PANTHER PTHR30363 1 257 6.1E-162 T 22-04-2016 APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 SUPERFAMILY SSF100950 73 234 1.12E-36 T 22-04-2016 APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 SMART SM01134 72 233 7.1E-72 T 22-04-2016 APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 SUPERFAMILY SSF46785 4 61 1.32E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 Gene3D G3DSA:1.10.10.10 1 60 5.9E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15410 4253926988a16ba07678e8f4c3555b1c 257 Gene3D G3DSA:3.40.50.1360 76 215 9.0E-17 T 22-04-2016 APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 SUPERFAMILY SSF55804 150 276 4.53E-12 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 Gene3D G3DSA:3.30.1340.10 287 374 3.4E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 SUPERFAMILY SSF55594 287 375 5.5E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 PANTHER PTHR30181 2 376 7.0E-192 T 22-04-2016 APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 PANTHER PTHR30181:SF3 2 376 7.0E-192 T 22-04-2016 APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 Gene3D G3DSA:3.40.930.10 150 277 3.5E-11 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 SUPERFAMILY SSF55804 2 140 1.57E-39 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 Gene3D G3DSA:3.40.930.10 5 141 9.1E-41 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 2.1E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 2.1E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 2.1E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 1.4E-29 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 1.6E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS12125 89625cf3feb00d9863ea5c71c520b6bd 376 Pfam PF00381 PTS HPr component phosphorylation site 287 368 8.1E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 2 383 1.5E-131 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 PANTHER PTHR30604 1 386 1.5E-124 T 22-04-2016 APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 PRINTS PR00811 Bacterial general secretion pathway protein D signature 371 385 4.4E-12 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 PRINTS PR00811 Bacterial general secretion pathway protein D signature 348 366 4.4E-12 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 PRINTS PR00811 Bacterial general secretion pathway protein D signature 220 244 4.4E-12 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 SMART SM00965 20 68 4.3E-5 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 Pfam PF03958 Bacterial type II/III secretion system short domain 94 152 3.6E-9 T 22-04-2016 IPR005644 NolW-like APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 PRINTS PR01032 Gene IV protein signature 204 227 3.2E-8 T 22-04-2016 APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 PRINTS PR01032 Gene IV protein signature 311 339 3.2E-8 T 22-04-2016 APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 PRINTS PR01032 Gene IV protein signature 245 268 3.2E-8 T 22-04-2016 APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 Pfam PF00263 Bacterial type II and III secretion system protein 224 383 4.2E-45 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 APECO1_RS19410 79a7415255135f6b3fa87fe7aa6b966c 386 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 329 362 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 3.9E-242 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 SUPERFAMILY SSF53659 3 416 6.34E-151 T 22-04-2016 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 SMART SM01329 28 412 1.9E-182 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 PANTHER PTHR11835 1 164 4.4E-248 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 PANTHER PTHR11835 188 255 4.4E-248 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 PANTHER PTHR11835 275 416 4.4E-248 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 1.3E-117 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 PANTHER PTHR11835:SF52 1 164 4.4E-248 T 22-04-2016 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 PANTHER PTHR11835:SF52 188 255 4.4E-248 T 22-04-2016 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 PANTHER PTHR11835:SF52 275 416 4.4E-248 T 22-04-2016 APECO1_RS05735 23ece579f939e0f0363d9ecdb0857a2f 416 Gene3D G3DSA:3.40.718.10 10 416 4.0E-171 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS04975 60072d0f3089e81520b328ab070c1040 285 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 50 139 2.0E-8 T 22-04-2016 IPR006894 HupH hydrogenase expression protein, C-terminal APECO1_RS04975 60072d0f3089e81520b328ab070c1040 285 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 164 279 1.0E-31 T 22-04-2016 IPR006894 HupH hydrogenase expression protein, C-terminal APECO1_RS04975 60072d0f3089e81520b328ab070c1040 285 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 49 149 2.0E-25 T 22-04-2016 IPR006894 HupH hydrogenase expression protein, C-terminal APECO1_RS04975 60072d0f3089e81520b328ab070c1040 285 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 164 279 1.0E-62 T 22-04-2016 IPR006894 HupH hydrogenase expression protein, C-terminal APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 PANTHER PTHR30267 1 644 0.0 T 22-04-2016 APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 PANTHER PTHR30267:SF2 1 644 0.0 T 22-04-2016 APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.7E-76 T 22-04-2016 IPR010650 PrkA C-terminal domain APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 SMART SM00763 19 380 1.2E-217 T 22-04-2016 IPR013153 PrkA AAA domain APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 Gene3D G3DSA:3.40.50.300 75 158 2.0E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 Gene3D G3DSA:3.40.50.300 243 329 2.0E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 SUPERFAMILY SSF52540 241 368 3.57E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 SUPERFAMILY SSF52540 75 154 3.57E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 PIRSF PIRSF000549 1 644 3.1E-293 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 APECO1_RS09550 7d791ccfa3356359facd9673f209c23a 644 Pfam PF08298 PrkA AAA domain 20 380 2.1E-180 T 22-04-2016 IPR013153 PrkA AAA domain APECO1_RS20305 d9f70e924435a789510de6d9c3fbbd96 334 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS20305 d9f70e924435a789510de6d9c3fbbd96 334 PANTHER PTHR24220:SF493 14 330 9.5E-218 T 22-04-2016 APECO1_RS20305 d9f70e924435a789510de6d9c3fbbd96 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 6.6E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS20305 d9f70e924435a789510de6d9c3fbbd96 334 PANTHER PTHR24220 14 330 9.5E-218 T 22-04-2016 APECO1_RS20305 d9f70e924435a789510de6d9c3fbbd96 334 Gene3D G3DSA:3.40.50.300 11 263 2.1E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20305 d9f70e924435a789510de6d9c3fbbd96 334 SUPERFAMILY SSF52540 13 261 5.09E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20305 d9f70e924435a789510de6d9c3fbbd96 334 SMART SM00382 47 239 3.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS20305 d9f70e924435a789510de6d9c3fbbd96 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 8.6E-25 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS20305 d9f70e924435a789510de6d9c3fbbd96 334 Pfam PF00005 ABC transporter 38 189 7.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS18285 3bd4474276d81e34a5f41940e5023c8f 133 PANTHER PTHR33515 1 133 1.3E-54 T 22-04-2016 APECO1_RS18285 3bd4474276d81e34a5f41940e5023c8f 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 119 2.4E-45 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APECO1_RS18285 3bd4474276d81e34a5f41940e5023c8f 133 SUPERFAMILY SSF89919 2 107 4.97E-36 T 22-04-2016 IPR023799 Ribosome-binding factor A domain APECO1_RS18285 3bd4474276d81e34a5f41940e5023c8f 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 APECO1_RS18285 3bd4474276d81e34a5f41940e5023c8f 133 Pfam PF02033 Ribosome-binding factor A 7 112 1.3E-32 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APECO1_RS18285 3bd4474276d81e34a5f41940e5023c8f 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.311 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APECO1_RS18285 3bd4474276d81e34a5f41940e5023c8f 133 Gene3D G3DSA:3.30.300.20 1 107 9.5E-40 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APECO1_RS18285 3bd4474276d81e34a5f41940e5023c8f 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 9.0E-48 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APECO1_RS12870 5cb3c2151df8dcf2cf314a83f6e5b1b8 219 PANTHER PTHR30353:SF0 1 219 2.7E-103 T 22-04-2016 APECO1_RS12870 5cb3c2151df8dcf2cf314a83f6e5b1b8 219 Pfam PF09335 SNARE associated Golgi protein 49 176 5.6E-27 T 22-04-2016 IPR032816 SNARE associated Golgi protein APECO1_RS12870 5cb3c2151df8dcf2cf314a83f6e5b1b8 219 PANTHER PTHR30353 1 219 2.7E-103 T 22-04-2016 IPR032818 DedA family APECO1_RS21965 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.603 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APECO1_RS21965 9d7cacf25e6bf152f5cf75cd6bcaff38 497 SUPERFAMILY SSF50475 6 325 2.43E-128 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS21965 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 5.7E-172 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APECO1_RS21965 9d7cacf25e6bf152f5cf75cd6bcaff38 497 PANTHER PTHR30108 1 497 9.0E-288 T 22-04-2016 APECO1_RS21965 9d7cacf25e6bf152f5cf75cd6bcaff38 497 PANTHER PTHR30108:SF1 1 497 9.0E-288 T 22-04-2016 APECO1_RS21965 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Gene3D G3DSA:3.40.1670.10 340 457 1.7E-55 T 22-04-2016 APECO1_RS21965 9d7cacf25e6bf152f5cf75cd6bcaff38 497 Gene3D G3DSA:1.20.5.570 458 497 7.7E-23 T 22-04-2016 APECO1_RS21965 9d7cacf25e6bf152f5cf75cd6bcaff38 497 SUPERFAMILY SSF143968 326 489 3.4E-66 T 22-04-2016 APECO1_RS21965 9d7cacf25e6bf152f5cf75cd6bcaff38 497 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 1.7E-191 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.9E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 624 637 1.9E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.9E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.9E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.9E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.9E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.9E-60 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 Pfam PF01578 Cytochrome C assembly protein 89 296 7.0E-55 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 634 0.0 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 630 3.2E-123 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PANTHER PTHR30009:SF0 1 418 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PANTHER PTHR30009:SF0 463 647 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.5E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 4.5E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 4.5E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 4.5E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 4.5E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 4.5E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 4.5E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 4.5E-96 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PANTHER PTHR30009 1 418 0.0 T 22-04-2016 APECO1_RS12265 7b66d9b73068f855e2ee7ab644677fd6 647 PANTHER PTHR30009 463 647 0.0 T 22-04-2016 APECO1_RS06020 31a9fe12c64574fe659ecaed2106f724 246 Gene3D G3DSA:2.60.40.360 131 210 4.5E-5 T 22-04-2016 IPR008962 PapD-like APECO1_RS06020 31a9fe12c64574fe659ecaed2106f724 246 Pfam PF02368 Bacterial Ig-like domain (group 2) 161 238 6.2E-18 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 APECO1_RS06020 31a9fe12c64574fe659ecaed2106f724 246 SMART SM00635 160 240 6.7E-18 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 APECO1_RS06020 31a9fe12c64574fe659ecaed2106f724 246 Pfam PF16461 Lambda phage tail tube protein, TTP 4 154 7.5E-70 T 22-04-2016 IPR032494 Lambda phage tail tube protein APECO1_RS09655 e6576568a181edce2027623873528bdc 193 PANTHER PTHR37530 1 193 7.4E-72 T 22-04-2016 APECO1_RS09655 e6576568a181edce2027623873528bdc 193 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 189 2.7E-89 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APECO1_RS09655 e6576568a181edce2027623873528bdc 193 PIRSF PIRSF004982 5 189 1.7E-58 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APECO1_RS09655 e6576568a181edce2027623873528bdc 193 Pfam PF03843 Outer membrane lipoprotein Slp family 20 167 5.2E-49 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 PIRSF PIRSF000485 1 483 2.2E-173 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 PANTHER PTHR11907 1 480 6.7E-263 T 22-04-2016 APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 2.7E-163 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 PANTHER PTHR11907:SF0 1 480 6.7E-263 T 22-04-2016 APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 45.141 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 Pfam PF13522 Glutamine amidotransferase domain 64 202 1.8E-15 T 22-04-2016 APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 1.2E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 SUPERFAMILY SSF56235 2 259 7.46E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 Gene3D G3DSA:3.40.50.2020 280 446 1.5E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 Gene3D G3DSA:3.60.20.10 2 260 2.2E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS12845 dd5cc4471613a9197984d0213d07baaa 505 SUPERFAMILY SSF53271 252 485 5.9E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 SUPERFAMILY SSF47729 1 90 8.54E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 PANTHER PTHR33175 1 90 1.6E-59 T 22-04-2016 APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 SMART SM00411 1 90 3.1E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 PANTHER PTHR33175:SF4 1 90 1.6E-59 T 22-04-2016 APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.9E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS22810 4939a1cdd4b26c7d9053b02c16db7e41 90 Gene3D G3DSA:4.10.520.10 1 90 3.1E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APECO1_RS00290 10af8e029d2976e91ee59bcb09e86b15 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 1.9E-33 T 22-04-2016 IPR007474 ApaG domain APECO1_RS00290 10af8e029d2976e91ee59bcb09e86b15 125 Gene3D G3DSA:2.60.40.1470 6 125 4.6E-46 T 22-04-2016 IPR007474 ApaG domain APECO1_RS00290 10af8e029d2976e91ee59bcb09e86b15 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 33.655 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG APECO1_RS00290 10af8e029d2976e91ee59bcb09e86b15 125 PANTHER PTHR14289 5 122 1.1E-60 T 22-04-2016 APECO1_RS00290 10af8e029d2976e91ee59bcb09e86b15 125 SUPERFAMILY SSF110069 5 125 2.09E-48 T 22-04-2016 IPR007474 ApaG domain APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 Pfam PF00501 AMP-binding enzyme 83 522 2.4E-93 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.4E-19 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.7E-26 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 Gene3D G3DSA:3.40.50.980 267 424 4.9E-28 T 22-04-2016 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 Gene3D G3DSA:3.40.50.980 79 266 1.9E-45 T 22-04-2016 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.37 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 PANTHER PTHR24095 20 643 0.0 T 22-04-2016 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 Gene3D G3DSA:3.30.300.30 518 637 6.0E-30 T 22-04-2016 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 SUPERFAMILY SSF56801 11 643 5.49E-192 T 22-04-2016 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 PANTHER PTHR24095:SF178 20 643 0.0 T 22-04-2016 APECO1_RS23285 135dd00e6fdb27f087706d5f46a00b45 652 Gene3D G3DSA:2.30.38.10 439 515 1.9E-8 T 22-04-2016 APECO1_RS17175 8da7256f9fed8e92cc2d6ddf7a055cd6 207 SUPERFAMILY SSF51161 2 203 7.62E-36 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS17175 8da7256f9fed8e92cc2d6ddf7a055cd6 207 PANTHER PTHR23416:SF23 84 204 1.1E-16 T 22-04-2016 APECO1_RS17175 8da7256f9fed8e92cc2d6ddf7a055cd6 207 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 161 189 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS17175 8da7256f9fed8e92cc2d6ddf7a055cd6 207 PANTHER PTHR23416 84 204 1.1E-16 T 22-04-2016 APECO1_RS17175 8da7256f9fed8e92cc2d6ddf7a055cd6 207 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 4 201 7.1E-61 T 22-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like APECO1_RS17175 8da7256f9fed8e92cc2d6ddf7a055cd6 207 Gene3D G3DSA:3.40.50.20 1 85 5.2E-14 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS17175 8da7256f9fed8e92cc2d6ddf7a055cd6 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 137 169 0.0022 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS17175 8da7256f9fed8e92cc2d6ddf7a055cd6 207 Gene3D G3DSA:2.160.10.10 88 205 1.3E-25 T 22-04-2016 APECO1_RS17955 66264dfa2b7b6c7fcbf0742e7e63ca84 495 PANTHER PTHR30536:SF5 1 495 7.0E-285 T 22-04-2016 APECO1_RS17955 66264dfa2b7b6c7fcbf0742e7e63ca84 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 107 494 5.6E-155 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 APECO1_RS17955 66264dfa2b7b6c7fcbf0742e7e63ca84 495 PANTHER PTHR30536 1 495 7.0E-285 T 22-04-2016 APECO1_RS17955 66264dfa2b7b6c7fcbf0742e7e63ca84 495 SMART SM00858 10 81 8.8E-18 T 22-04-2016 IPR013974 SAF domain APECO1_RS17955 66264dfa2b7b6c7fcbf0742e7e63ca84 495 Pfam PF08666 SAF domain 10 81 2.0E-16 T 22-04-2016 IPR013974 SAF domain APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 SMART SM01192 143 430 1.3E-215 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 Pfam PF03952 Enolase, N-terminal domain 4 134 5.7E-59 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 339 353 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 165 178 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 368 385 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 107 123 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 37 51 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 PRINTS PR00148 Enolase signature 316 327 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 PANTHER PTHR11902 1 427 6.6E-279 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 PIRSF PIRSF001400 1 430 4.0E-194 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 Hamap MF_00318 Enolase [eno]. 2 416 44.545 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 SUPERFAMILY SSF51604 143 427 9.34E-129 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 ProSitePatterns PS00164 Enolase signature. 339 352 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 6.0E-143 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 SMART SM01193 4 134 2.6E-94 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 Gene3D G3DSA:3.20.20.120 128 429 3.0E-138 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 Gene3D G3DSA:3.30.390.10 3 127 2.1E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 8.8E-207 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS15770 d196eab62d33c61927f63166a310bad3 432 SUPERFAMILY SSF54826 3 138 3.71E-57 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 Gene3D G3DSA:3.50.50.60 169 201 4.7E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 9.4E-52 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 PANTHER PTHR10160 1 510 0.0 T 22-04-2016 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 510 0.0 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 Gene3D G3DSA:3.40.50.1770 202 371 4.2E-47 T 22-04-2016 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 SMART SM01003 4 137 5.3E-76 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 509 3.9E-36 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 PIRSF PIRSF000203 1 509 1.5E-288 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 SUPERFAMILY SSF51735 137 317 1.69E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 SUPERFAMILY SSF52283 1 168 1.02E-56 T 22-04-2016 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 Gene3D G3DSA:3.40.50.1770 1 168 1.1E-69 T 22-04-2016 APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.7E-76 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APECO1_RS08610 a8247bd7e549f169b126d8f919b09224 510 SMART SM01002 146 311 5.5E-85 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APECO1_RS01570 587cf5a5b4bffe865aa14c125840a11b 329 PANTHER PTHR11732:SF269 1 319 8.0E-212 T 22-04-2016 APECO1_RS01570 587cf5a5b4bffe865aa14c125840a11b 329 Pfam PF00248 Aldo/keto reductase family 16 309 4.5E-75 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01570 587cf5a5b4bffe865aa14c125840a11b 329 Gene3D G3DSA:3.20.20.100 1 323 1.1E-114 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01570 587cf5a5b4bffe865aa14c125840a11b 329 PANTHER PTHR11732 1 319 8.0E-212 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS01570 587cf5a5b4bffe865aa14c125840a11b 329 SUPERFAMILY SSF51430 1 314 4.45E-103 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS24920 e11a7d5a67e745da12ca21b543c4b73d 360 PANTHER PTHR11496 1 359 5.3E-168 T 22-04-2016 APECO1_RS24920 e11a7d5a67e745da12ca21b543c4b73d 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS24920 e11a7d5a67e745da12ca21b543c4b73d 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 2.8E-69 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS24920 e11a7d5a67e745da12ca21b543c4b73d 360 PIRSF PIRSF000112 1 358 1.6E-98 T 22-04-2016 APECO1_RS24920 e11a7d5a67e745da12ca21b543c4b73d 360 PANTHER PTHR11496:SF57 1 359 5.3E-168 T 22-04-2016 APECO1_RS24920 e11a7d5a67e745da12ca21b543c4b73d 360 Gene3D G3DSA:1.20.1090.10 160 358 5.8E-67 T 22-04-2016 APECO1_RS24920 e11a7d5a67e745da12ca21b543c4b73d 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS24920 e11a7d5a67e745da12ca21b543c4b73d 360 SUPERFAMILY SSF56796 3 355 3.66E-89 T 22-04-2016 APECO1_RS24920 e11a7d5a67e745da12ca21b543c4b73d 360 Gene3D G3DSA:3.40.50.1970 2 158 2.9E-47 T 22-04-2016 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 2.2E-210 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 SMART SM00788 4 425 6.7E-302 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:1.10.300.10 103 195 1.6E-38 T 22-04-2016 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 SUPERFAMILY SSF52540 3 431 1.49E-180 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.0E-176 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 218.673 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:3.90.170.10 268 426 9.0E-66 T 22-04-2016 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 PANTHER PTHR11846 1 429 6.4E-263 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:3.40.440.10 196 266 1.3E-71 T 22-04-2016 APECO1_RS24290 c75382fff9ecc0ede3bf989eaa3734cf 432 Gene3D G3DSA:3.40.440.10 4 94 1.3E-71 T 22-04-2016 APECO1_RS04070 06492c649ddc5b0e81a734de36500f67 208 Gene3D G3DSA:1.20.1050.10 84 203 1.8E-30 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS04070 06492c649ddc5b0e81a734de36500f67 208 SUPERFAMILY SSF47616 84 203 2.23E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS04070 06492c649ddc5b0e81a734de36500f67 208 PANTHER PTHR11260 1 206 1.7E-93 T 22-04-2016 APECO1_RS04070 06492c649ddc5b0e81a734de36500f67 208 PANTHER PTHR11260:SF157 1 206 1.7E-93 T 22-04-2016 APECO1_RS04070 06492c649ddc5b0e81a734de36500f67 208 Gene3D G3DSA:3.40.30.10 1 82 4.5E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS04070 06492c649ddc5b0e81a734de36500f67 208 SUPERFAMILY SSF52833 1 85 4.35E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS04070 06492c649ddc5b0e81a734de36500f67 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 76 3.2E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APECO1_RS04070 06492c649ddc5b0e81a734de36500f67 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 197 3.3E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APECO1_RS14905 f4cf3c110a0b98b054ecb234e770a25b 359 Gene3D G3DSA:2.30.300.10 1 105 9.3E-75 T 22-04-2016 APECO1_RS14905 f4cf3c110a0b98b054ecb234e770a25b 359 Gene3D G3DSA:2.30.300.10 276 352 9.3E-75 T 22-04-2016 APECO1_RS14905 f4cf3c110a0b98b054ecb234e770a25b 359 Gene3D G3DSA:3.30.1920.10 201 272 5.4E-28 T 22-04-2016 IPR023399 Baseplate-like protein, two-layer sandwich domain APECO1_RS14905 f4cf3c110a0b98b054ecb234e770a25b 359 Gene3D G3DSA:3.55.50.10 106 176 1.7E-28 T 22-04-2016 APECO1_RS14905 f4cf3c110a0b98b054ecb234e770a25b 359 SUPERFAMILY SSF69279 1 176 2.89E-53 T 22-04-2016 APECO1_RS14905 f4cf3c110a0b98b054ecb234e770a25b 359 SUPERFAMILY SSF69279 179 342 6.23E-55 T 22-04-2016 APECO1_RS14905 f4cf3c110a0b98b054ecb234e770a25b 359 PIRSF PIRSF004440 1 357 6.5E-100 T 22-04-2016 IPR026276 Baseplate protein GpP APECO1_RS16855 f5f7e47bda2592f979b52b559a9e6492 178 PANTHER PTHR33420 1 178 1.1E-20 T 22-04-2016 APECO1_RS16855 f5f7e47bda2592f979b52b559a9e6492 178 Gene3D G3DSA:2.60.40.1090 23 177 4.9E-36 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS16855 f5f7e47bda2592f979b52b559a9e6492 178 SUPERFAMILY SSF49401 31 177 1.49E-30 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS16855 f5f7e47bda2592f979b52b559a9e6492 178 Pfam PF00419 Fimbrial protein 26 177 6.1E-12 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 SUPERFAMILY SSF53681 119 229 7.19E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 Gene3D G3DSA:3.40.50.1860 1 113 2.7E-45 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 PANTHER PTHR21198 1 228 1.1E-98 T 22-04-2016 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 Gene3D G3DSA:3.40.50.1860 114 216 3.7E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 PANTHER PTHR21198:SF7 1 228 1.1E-98 T 22-04-2016 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 3.3E-62 T 22-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 7.3E-56 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS16245 2c1b042d93dde01b4ab9f1d4d4d6abc1 230 SUPERFAMILY SSF53681 1 114 2.62E-36 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS21065 2268f4daf4bf7885738375c940773157 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 4.9E-21 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain APECO1_RS21065 2268f4daf4bf7885738375c940773157 142 Gene3D G3DSA:2.60.40.790 9 134 3.3E-15 T 22-04-2016 IPR008978 HSP20-like chaperone APECO1_RS21065 2268f4daf4bf7885738375c940773157 142 PANTHER PTHR11527:SF127 1 142 8.3E-88 T 22-04-2016 APECO1_RS21065 2268f4daf4bf7885738375c940773157 142 PANTHER PTHR11527 1 142 8.3E-88 T 22-04-2016 IPR031107 Small heat shock protein HSP20 APECO1_RS21065 2268f4daf4bf7885738375c940773157 142 SUPERFAMILY SSF49764 30 134 4.19E-18 T 22-04-2016 IPR008978 HSP20-like chaperone APECO1_RS21065 2268f4daf4bf7885738375c940773157 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 47.247 T 22-04-2016 IPR022848 Small heat shock protein IbpB APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 PANTHER PTHR19211 1 571 3.1E-247 T 22-04-2016 APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 PANTHER PTHR19211:SF45 1 571 3.1E-247 T 22-04-2016 APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 SUPERFAMILY SSF52540 9 239 2.04E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 SUPERFAMILY SSF52540 311 501 5.08E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 SMART SM00382 344 514 4.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 SMART SM00382 28 230 7.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 Pfam PF00005 ABC transporter 19 185 1.9E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 Pfam PF00005 ABC transporter 336 469 1.7E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 Gene3D G3DSA:3.40.50.300 2 270 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 Gene3D G3DSA:3.40.50.300 318 556 1.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 Pfam PF16326 ABC transporter C-terminal domain 561 630 3.1E-21 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 APECO1_RS04825 79dc3760f9ad43fee2e7bfc899361047 635 Pfam PF12848 ABC transporter 224 294 1.1E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain APECO1_RS24295 bf9857962d63f9a9d1c63b682285a5b6 141 Gene3D G3DSA:1.10.10.10 2 133 3.8E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24295 bf9857962d63f9a9d1c63b682285a5b6 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site APECO1_RS24295 bf9857962d63f9a9d1c63b682285a5b6 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 2.8E-36 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APECO1_RS24295 bf9857962d63f9a9d1c63b682285a5b6 141 SUPERFAMILY SSF46785 2 131 6.37E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24295 bf9857962d63f9a9d1c63b682285a5b6 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.136 T 22-04-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 APECO1_RS24295 bf9857962d63f9a9d1c63b682285a5b6 141 PANTHER PTHR33221 2 141 2.2E-82 T 22-04-2016 APECO1_RS24295 bf9857962d63f9a9d1c63b682285a5b6 141 Pfam PF02082 Transcriptional regulator 2 82 3.0E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APECO1_RS24295 bf9857962d63f9a9d1c63b682285a5b6 141 PANTHER PTHR33221:SF4 2 141 2.2E-82 T 22-04-2016 APECO1_RS02045 111a14e2f39729750ab3bfc622cd4712 457 PANTHER PTHR11785:SF352 1 452 0.0 T 22-04-2016 APECO1_RS02045 111a14e2f39729750ab3bfc622cd4712 457 PIRSF PIRSF006060 1 456 2.2E-77 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS02045 111a14e2f39729750ab3bfc622cd4712 457 Pfam PF00324 Amino acid permease 15 451 4.1E-105 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APECO1_RS02045 111a14e2f39729750ab3bfc622cd4712 457 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APECO1_RS02045 111a14e2f39729750ab3bfc622cd4712 457 PANTHER PTHR11785 1 452 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 Gene3D G3DSA:3.40.980.10 8 169 4.9E-51 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 PANTHER PTHR10192 5 170 2.4E-95 T 22-04-2016 APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 PANTHER PTHR10192:SF18 5 170 2.4E-95 T 22-04-2016 APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 SUPERFAMILY SSF53218 7 168 1.3E-46 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 PIRSF PIRSF006443 1 166 1.6E-62 T 22-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.4E-32 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 2.7E-83 T 22-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 SMART SM00852 14 158 3.3E-30 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS03790 1d192ad9a2cf2749c9862f362feb18bc 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 1.9E-39 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 Pfam PF06958 S-type Pyocin 309 450 2.8E-37 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 Gene3D G3DSA:2.30.110.20 46 143 7.6E-10 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 SUPERFAMILY SSF54060 453 590 1.53E-42 T 22-04-2016 APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 Pfam PF05638 Type VI secretion system effector, Hcp 28 138 1.9E-12 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 SUPERFAMILY SSF141452 6 156 2.22E-27 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 SUPERFAMILY SSF69369 285 477 1.44E-40 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 Gene3D G3DSA:3.90.540.10 453 592 2.6E-52 T 22-04-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 5 146 6.9E-36 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 PANTHER PTHR34319 4 146 1.3E-46 T 22-04-2016 APECO1_RS00600 403434735ddd4e59db45ca60ede0645e 593 PANTHER PTHR34319:SF1 4 146 1.3E-46 T 22-04-2016 APECO1_RS01870 b0e98d80d4ef5bade813b1737737382c 223 SUPERFAMILY SSF102588 18 222 8.5E-42 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain APECO1_RS01870 b0e98d80d4ef5bade813b1737737382c 223 Gene3D G3DSA:3.40.50.10320 16 222 2.3E-47 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain APECO1_RS01870 b0e98d80d4ef5bade813b1737737382c 223 Pfam PF02585 GlcNAc-PI de-N-acetylase 20 141 1.6E-22 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related APECO1_RS01870 b0e98d80d4ef5bade813b1737737382c 223 PANTHER PTHR12993 3 185 3.0E-28 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related APECO1_RS24450 c73d2284a32902f61bdcc311adcfa628 513 SUPERFAMILY SSF100950 3 256 5.58E-81 T 22-04-2016 APECO1_RS24450 c73d2284a32902f61bdcc311adcfa628 513 Gene3D G3DSA:3.40.1080.10 2 241 1.7E-62 T 22-04-2016 APECO1_RS24450 c73d2284a32902f61bdcc311adcfa628 513 Pfam PF01144 Coenzyme A transferase 6 241 8.0E-27 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS24450 c73d2284a32902f61bdcc311adcfa628 513 SMART SM00882 4 242 4.6E-60 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS24450 c73d2284a32902f61bdcc311adcfa628 513 PANTHER PTHR13707:SF38 1 507 9.0E-173 T 22-04-2016 APECO1_RS24450 c73d2284a32902f61bdcc311adcfa628 513 SUPERFAMILY SSF100950 276 504 5.58E-60 T 22-04-2016 APECO1_RS24450 c73d2284a32902f61bdcc311adcfa628 513 PANTHER PTHR13707 1 507 9.0E-173 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS24450 c73d2284a32902f61bdcc311adcfa628 513 Gene3D G3DSA:3.40.810.20 277 498 2.0E-59 T 22-04-2016 APECO1_RS24450 c73d2284a32902f61bdcc311adcfa628 513 PIRSF PIRSF000858 1 513 4.6E-197 T 22-04-2016 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 APECO1_RS09625 baa4308cec92c44ae312c56d9e35f7bc 119 Pfam PF09313 Domain of unknown function (DUF1971) 12 96 8.0E-24 T 22-04-2016 IPR015392 Domain of unknown function DUF1971 APECO1_RS09625 baa4308cec92c44ae312c56d9e35f7bc 119 PIRSF PIRSF020632 1 119 3.8E-57 T 22-04-2016 IPR014510 Tellurite resistance predicted, YeaR APECO1_RS09625 baa4308cec92c44ae312c56d9e35f7bc 119 Gene3D G3DSA:2.60.120.10 1 117 3.2E-45 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS09625 baa4308cec92c44ae312c56d9e35f7bc 119 SUPERFAMILY SSF51197 1 106 1.0E-34 T 22-04-2016 APECO1_RS08905 79ef566e49f6c5a54c844bdbcc62fbf8 310 Gene3D G3DSA:3.40.190.10 174 257 1.1E-4 T 22-04-2016 APECO1_RS08905 79ef566e49f6c5a54c844bdbcc62fbf8 310 Gene3D G3DSA:1.10.10.10 6 88 2.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08905 79ef566e49f6c5a54c844bdbcc62fbf8 310 SUPERFAMILY SSF46785 6 88 2.18E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08905 79ef566e49f6c5a54c844bdbcc62fbf8 310 Gene3D G3DSA:3.40.190.10 89 173 1.0E-7 T 22-04-2016 APECO1_RS08905 79ef566e49f6c5a54c844bdbcc62fbf8 310 SUPERFAMILY SSF53850 88 290 2.35E-27 T 22-04-2016 APECO1_RS08905 79ef566e49f6c5a54c844bdbcc62fbf8 310 PANTHER PTHR30126 1 306 9.6E-190 T 22-04-2016 APECO1_RS08905 79ef566e49f6c5a54c844bdbcc62fbf8 310 Pfam PF03466 LysR substrate binding domain 88 290 1.6E-25 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS08905 79ef566e49f6c5a54c844bdbcc62fbf8 310 PANTHER PTHR30126:SF18 1 306 9.6E-190 T 22-04-2016 APECO1_RS08905 79ef566e49f6c5a54c844bdbcc62fbf8 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 6.3E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS15515 ebddcced6e3e866c95521800722a1540 290 Gene3D G3DSA:3.40.50.300 112 281 6.9E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15515 ebddcced6e3e866c95521800722a1540 290 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 76 289 1.8E-100 T 22-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 APECO1_RS15515 ebddcced6e3e866c95521800722a1540 290 PANTHER PTHR30134 41 288 5.1E-160 T 22-04-2016 APECO1_RS15515 ebddcced6e3e866c95521800722a1540 290 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 267 1.1E-34 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APECO1_RS15515 ebddcced6e3e866c95521800722a1540 290 PANTHER PTHR30134:SF2 41 288 5.1E-160 T 22-04-2016 APECO1_RS15515 ebddcced6e3e866c95521800722a1540 290 SUPERFAMILY SSF52540 85 286 1.9E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 Gene3D G3DSA:3.40.50.720 5 260 2.9E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 259 2.0E-43 T 22-04-2016 APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 SUPERFAMILY SSF51735 5 261 2.89E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 PANTHER PTHR24322 167 198 4.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 PANTHER PTHR24322 145 151 4.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 PANTHER PTHR24322 10 127 4.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.9E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.9E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.9E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.9E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS24465 a39275a43fcd32ee8ad29d4ba2c6299f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.9E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 528 0.0 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 PANTHER PTHR23115 250 471 1.4E-252 T 22-04-2016 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 PANTHER PTHR23115 1 183 1.4E-252 T 22-04-2016 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 SUPERFAMILY SSF52540 9 276 9.16E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 Gene3D G3DSA:3.40.50.300 9 282 1.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 SUPERFAMILY SSF54980 392 467 2.52E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 513 4.9E-47 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 Gene3D G3DSA:3.30.70.870 394 462 7.6E-14 T 22-04-2016 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 Gene3D G3DSA:2.40.30.10 292 393 9.5E-24 T 22-04-2016 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 Pfam PF00009 Elongation factor Tu GTP binding domain 12 276 1.1E-46 T 22-04-2016 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 SUPERFAMILY SSF50447 261 392 2.03E-27 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 526 52.655 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 PANTHER PTHR23115:SF69 250 471 1.4E-252 T 22-04-2016 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 PANTHER PTHR23115:SF69 1 183 1.4E-252 T 22-04-2016 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 PRINTS PR00315 GTP-binding elongation factor signature 84 94 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 PRINTS PR00315 GTP-binding elongation factor signature 100 111 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 PRINTS PR00315 GTP-binding elongation factor signature 64 72 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 PRINTS PR00315 GTP-binding elongation factor signature 136 145 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 Pfam PF03144 Elongation factor Tu domain 2 313 379 3.5E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APECO1_RS25510 ea3f2098faae69a7205f90056d58ccb7 528 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 155 1.5E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 PANTHER PTHR32092:SF6 2 451 1.7E-299 T 22-04-2016 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 421 1.7E-62 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 SUPERFAMILY SSF51735 5 171 2.63E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 SUPERFAMILY SSF56327 172 449 1.99E-74 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 188 2.0E-81 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 Gene3D G3DSA:3.90.110.10 171 449 3.4E-84 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 PANTHER PTHR32092 2 451 1.7E-299 T 22-04-2016 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 6.4E-42 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 6.4E-42 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 6.4E-42 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 6.4E-42 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 6.4E-42 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 6.4E-42 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 6.4E-42 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 22-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 APECO1_RS23580 e0bb30665b4954ad62d07b51d5e88635 451 Gene3D G3DSA:3.40.50.720 3 168 1.7E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00235 d43efdacf03de1c7002c21b246706bd3 256 Pfam PF01012 Electron transfer flavoprotein domain 28 210 5.9E-39 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS00235 d43efdacf03de1c7002c21b246706bd3 256 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 APECO1_RS00235 d43efdacf03de1c7002c21b246706bd3 256 PIRSF PIRSF000090 1 256 3.1E-68 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APECO1_RS00235 d43efdacf03de1c7002c21b246706bd3 256 Hamap MF_01055 Protein FixA [fixA]. 1 256 53.931 T 22-04-2016 IPR023463 Electron transfer flavoprotein, FixA subunit GO:0009055|GO:0009437 UniPathway: UPA00117 APECO1_RS00235 d43efdacf03de1c7002c21b246706bd3 256 PANTHER PTHR21294 1 254 3.3E-171 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APECO1_RS00235 d43efdacf03de1c7002c21b246706bd3 256 PANTHER PTHR21294:SF7 1 254 3.3E-171 T 22-04-2016 APECO1_RS00235 d43efdacf03de1c7002c21b246706bd3 256 SUPERFAMILY SSF52402 1 253 1.53E-60 T 22-04-2016 APECO1_RS00235 d43efdacf03de1c7002c21b246706bd3 256 Gene3D G3DSA:3.40.50.620 1 254 2.0E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS00235 d43efdacf03de1c7002c21b246706bd3 256 SMART SM00893 22 215 7.7E-42 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 SUPERFAMILY SSF55031 182 295 1.31E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS22615 1718f70bb36931aac47140238680657e 388 Pfam PF07687 Peptidase dimerisation domain 184 280 3.4E-12 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS22615 1718f70bb36931aac47140238680657e 388 Gene3D G3DSA:3.40.630.10 2 177 3.8E-95 T 22-04-2016 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 Gene3D G3DSA:3.40.630.10 297 388 3.8E-95 T 22-04-2016 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 372 9.5E-108 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 Pfam PF01546 Peptidase family M20/M25/M40 72 384 2.1E-32 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 PIRSF PIRSF005962 1 388 3.9E-124 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 PANTHER PTHR11014:SF63 10 388 1.9E-146 T 22-04-2016 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 PANTHER PTHR11014 10 388 1.9E-146 T 22-04-2016 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 SUPERFAMILY SSF53187 2 196 5.95E-85 T 22-04-2016 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 SUPERFAMILY SSF53187 297 387 5.95E-85 T 22-04-2016 APECO1_RS22615 1718f70bb36931aac47140238680657e 388 Gene3D G3DSA:3.30.70.360 180 296 1.6E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS15175 4f563011ab0db0a71851097347585757 149 SUPERFAMILY SSF54106 97 147 4.84E-8 T 22-04-2016 IPR018392 LysM domain APECO1_RS15175 4f563011ab0db0a71851097347585757 149 PANTHER PTHR34700 1 149 1.2E-40 T 22-04-2016 APECO1_RS15175 4f563011ab0db0a71851097347585757 149 SMART SM00257 98 147 3.4E-14 T 22-04-2016 IPR018392 LysM domain APECO1_RS15175 4f563011ab0db0a71851097347585757 149 SMART SM00749 28 91 3.6E-9 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APECO1_RS15175 4f563011ab0db0a71851097347585757 149 Gene3D G3DSA:3.10.350.10 97 148 4.0E-12 T 22-04-2016 IPR018392 LysM domain APECO1_RS15175 4f563011ab0db0a71851097347585757 149 Pfam PF04972 BON domain 24 89 7.1E-10 T 22-04-2016 IPR007055 BON domain APECO1_RS15175 4f563011ab0db0a71851097347585757 149 Pfam PF01476 LysM domain 99 147 1.3E-12 T 22-04-2016 IPR018392 LysM domain APECO1_RS17010 ac2e06743bf2694787578256a9181b6a 682 PANTHER PTHR32552:SF15 11 682 2.1E-97 T 22-04-2016 APECO1_RS17010 ac2e06743bf2694787578256a9181b6a 682 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 22-04-2016 IPR010916 TonB box, conserved site APECO1_RS17010 ac2e06743bf2694787578256a9181b6a 682 Gene3D G3DSA:2.170.130.10 42 156 4.7E-38 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS17010 ac2e06743bf2694787578256a9181b6a 682 SUPERFAMILY SSF56935 331 682 1.57E-116 T 22-04-2016 APECO1_RS17010 ac2e06743bf2694787578256a9181b6a 682 SUPERFAMILY SSF56935 31 271 1.57E-116 T 22-04-2016 APECO1_RS17010 ac2e06743bf2694787578256a9181b6a 682 Pfam PF00593 TonB dependent receptor 418 680 3.7E-37 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS17010 ac2e06743bf2694787578256a9181b6a 682 PANTHER PTHR32552 11 682 2.1E-97 T 22-04-2016 APECO1_RS17010 ac2e06743bf2694787578256a9181b6a 682 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 153 2.6E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS17010 ac2e06743bf2694787578256a9181b6a 682 Gene3D G3DSA:2.40.170.20 157 682 2.4E-93 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.465 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 Pfam PF02151 UvrB/uvrC motif 205 237 4.8E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 5.4E-241 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 SMART SM00465 17 98 2.2E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 4.0E-45 T 22-04-2016 IPR001162 UvrC family homology region APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 1.7E-8 T 22-04-2016 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 SMART SM00278 588 607 2.9 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 SMART SM00278 556 575 0.43 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 PANTHER PTHR30562:SF1 1 608 0.0 T 22-04-2016 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 SUPERFAMILY SSF47781 521 606 2.57E-17 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 Gene3D G3DSA:1.10.150.20 555 609 3.3E-22 T 22-04-2016 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 SUPERFAMILY SSF82771 17 100 3.01E-24 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 Gene3D G3DSA:4.10.860.10 183 243 1.5E-22 T 22-04-2016 IPR001943 UVR domain GO:0005515 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.4E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 SUPERFAMILY SSF46600 190 243 3.4E-14 T 22-04-2016 IPR001943 UVR domain GO:0005515 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 PANTHER PTHR30562 1 608 0.0 T 22-04-2016 APECO1_RS10215 7586ffabb03f8d1006a2355ff4e44f6b 610 Gene3D G3DSA:3.40.1440.10 17 97 2.1E-11 T 22-04-2016 IPR027299 GIY-YIG domain APECO1_RS24265 fe3e07d970ca830a34d91a3fa7e4f9e2 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APECO1_RS24265 fe3e07d970ca830a34d91a3fa7e4f9e2 102 PANTHER PTHR34772 1 94 2.8E-45 T 22-04-2016 APECO1_RS24265 fe3e07d970ca830a34d91a3fa7e4f9e2 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APECO1_RS24265 fe3e07d970ca830a34d91a3fa7e4f9e2 102 Gene3D G3DSA:2.30.30.100 1 74 4.5E-38 T 22-04-2016 APECO1_RS24265 fe3e07d970ca830a34d91a3fa7e4f9e2 102 PANTHER PTHR34772:SF1 1 94 2.8E-45 T 22-04-2016 APECO1_RS24265 fe3e07d970ca830a34d91a3fa7e4f9e2 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 22-04-2016 IPR010920 LSM domain APECO1_RS18195 3182b332d3bf53110c047a967d45302d 191 SMART SM00749 129 191 9.4E-7 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APECO1_RS18195 3182b332d3bf53110c047a967d45302d 191 SMART SM00749 51 114 8.0E-13 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APECO1_RS18195 3182b332d3bf53110c047a967d45302d 191 PANTHER PTHR34606 1 190 2.0E-100 T 22-04-2016 APECO1_RS18195 3182b332d3bf53110c047a967d45302d 191 Pfam PF04972 BON domain 46 113 2.8E-14 T 22-04-2016 IPR007055 BON domain APECO1_RS18195 3182b332d3bf53110c047a967d45302d 191 Pfam PF04972 BON domain 124 188 3.2E-18 T 22-04-2016 IPR007055 BON domain APECO1_RS18195 3182b332d3bf53110c047a967d45302d 191 PANTHER PTHR34606:SF4 1 190 2.0E-100 T 22-04-2016 APECO1_RS22350 adc6c6332d30b6780bd04366b4b3f30c 329 SUPERFAMILY SSF53850 21 326 1.68E-93 T 22-04-2016 APECO1_RS22350 adc6c6332d30b6780bd04366b4b3f30c 329 Pfam PF13531 Bacterial extracellular solute-binding protein 32 280 2.6E-46 T 22-04-2016 APECO1_RS22350 adc6c6332d30b6780bd04366b4b3f30c 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 APECO1_RS22350 adc6c6332d30b6780bd04366b4b3f30c 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 1.2E-191 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APECO1_RS22350 adc6c6332d30b6780bd04366b4b3f30c 329 PANTHER PTHR30368 4 329 1.2E-197 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APECO1_RS22350 adc6c6332d30b6780bd04366b4b3f30c 329 PANTHER PTHR30368:SF2 4 329 1.2E-197 T 22-04-2016 APECO1_RS22350 adc6c6332d30b6780bd04366b4b3f30c 329 Gene3D G3DSA:3.40.190.10 21 164 2.4E-51 T 22-04-2016 APECO1_RS22350 adc6c6332d30b6780bd04366b4b3f30c 329 Gene3D G3DSA:3.40.190.10 173 295 2.6E-33 T 22-04-2016 APECO1_RS22350 adc6c6332d30b6780bd04366b4b3f30c 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Gene3D G3DSA:1.10.3170.10 155 349 2.3E-72 T 22-04-2016 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 SUPERFAMILY SSF52540 325 825 9.93E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 SUPERFAMILY SSF52540 14 80 9.93E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 SUPERFAMILY SSF52540 118 202 9.93E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Pfam PF13361 UvrD-like helicase C-terminal domain 443 808 1.9E-16 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 5 1173 15.228 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 SUPERFAMILY SSF52980 899 1173 3.16E-94 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Gene3D G3DSA:3.40.50.300 729 883 2.8E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Gene3D G3DSA:3.40.50.300 450 580 2.8E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Pfam PF12705 PD-(D/E)XK nuclease superfamily 951 1151 1.6E-5 T 22-04-2016 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 PANTHER PTHR11070:SF23 794 1168 0.0 T 22-04-2016 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 PANTHER PTHR11070:SF23 300 774 0.0 T 22-04-2016 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 PANTHER PTHR11070:SF23 1 89 0.0 T 22-04-2016 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 PANTHER PTHR11070:SF23 118 215 0.0 T 22-04-2016 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Gene3D G3DSA:3.90.320.10 890 1176 6.3E-108 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Gene3D G3DSA:1.10.486.10 583 728 4.0E-58 T 22-04-2016 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Gene3D G3DSA:3.40.50.300 14 82 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Gene3D G3DSA:3.40.50.300 120 150 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Gene3D G3DSA:3.40.50.300 351 449 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 PANTHER PTHR11070 794 1168 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 PANTHER PTHR11070 300 774 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 PANTHER PTHR11070 1 89 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 PANTHER PTHR11070 118 215 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 437 1.4E-70 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APECO1_RS16135 1026a89fd125ef3776c8f3da65f09e75 1180 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1172 0.0 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 APECO1_RS01535 9515c84ce0e80ff58be67c618687cc3d 46 Pfam PF00444 Ribosomal protein L36 1 41 2.2E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01535 9515c84ce0e80ff58be67c618687cc3d 46 PANTHER PTHR18804 1 46 3.6E-23 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01535 9515c84ce0e80ff58be67c618687cc3d 46 PANTHER PTHR18804:SF11 1 46 3.6E-23 T 22-04-2016 APECO1_RS01535 9515c84ce0e80ff58be67c618687cc3d 46 SUPERFAMILY SSF57840 1 41 6.15E-14 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01535 9515c84ce0e80ff58be67c618687cc3d 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01535 9515c84ce0e80ff58be67c618687cc3d 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.7E-8 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01535 9515c84ce0e80ff58be67c618687cc3d 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.791 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PANTHER PTHR33280:SF3 1 81 7.1E-44 T 22-04-2016 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 Pfam PF01197 Ribosomal protein L31 1 78 1.4E-25 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PANTHER PTHR33280 1 81 7.1E-44 T 22-04-2016 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.1E-15 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-15 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.1E-15 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 29.111 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.8E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS01540 7d0734f54a1b7a2cf2bdb32fc5b937b2 87 SUPERFAMILY SSF143800 1 80 5.49E-22 T 22-04-2016 APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 PANTHER PTHR24220 15 388 8.6E-294 T 22-04-2016 APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 SUPERFAMILY SSF52540 253 485 2.47E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 SUPERFAMILY SSF52540 12 236 7.84E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 Gene3D G3DSA:3.40.50.300 263 496 1.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 Gene3D G3DSA:3.40.50.300 11 241 1.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 Pfam PF00005 ABC transporter 280 434 1.9E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 Pfam PF00005 ABC transporter 29 178 2.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 SMART SM00382 38 225 2.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 SMART SM00382 288 483 0.7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS12015 402a38a2ddea5aa40a9e1252e74e2e73 506 PANTHER PTHR24220:SF303 15 388 8.6E-294 T 22-04-2016 APECO1_RS18940 4363326f335edc2987d8e609b33aa633 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.7E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18940 4363326f335edc2987d8e609b33aa633 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18940 4363326f335edc2987d8e609b33aa633 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18940 4363326f335edc2987d8e609b33aa633 127 PANTHER PTHR14413 1 118 6.7E-68 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18940 4363326f335edc2987d8e609b33aa633 127 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18940 4363326f335edc2987d8e609b33aa633 127 Gene3D G3DSA:3.90.1030.10 1 117 2.4E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18940 4363326f335edc2987d8e609b33aa633 127 SUPERFAMILY SSF64263 1 118 3.4E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 729 2.3E-125 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF51621 419 715 4.71E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.7E-15 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF52009 293 413 1.57E-25 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 PANTHER PTHR22931:SF23 1 716 0.0 T 22-04-2016 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.1E-24 T 22-04-2016 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.1E-24 T 22-04-2016 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.1E-24 T 22-04-2016 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.1E-24 T 22-04-2016 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF55781 2 159 3.27E-30 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:1.10.274.10 197 300 1.0E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:3.30.450.40 1 160 1.1E-46 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 SUPERFAMILY SSF47831 197 309 3.92E-26 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF01590 GAF domain 18 152 1.0E-14 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:3.20.20.60 420 736 1.3E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 PANTHER PTHR22931 1 716 0.0 T 22-04-2016 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 SMART SM00065 17 164 8.2E-29 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 Gene3D G3DSA:3.50.30.10 301 414 8.3E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 707 5.1E-110 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APECO1_RS16180 ceb368ce08c50f28a1e7758f00e86ce0 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 1.1E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS10250 7362b77daffc164d8ecf7143ac195c05 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 316 1.1E-54 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS10250 7362b77daffc164d8ecf7143ac195c05 328 PANTHER PTHR10314:SF105 5 317 5.2E-170 T 22-04-2016 APECO1_RS10250 7362b77daffc164d8ecf7143ac195c05 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 80.588 T 22-04-2016 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 APECO1_RS10250 7362b77daffc164d8ecf7143ac195c05 328 PANTHER PTHR10314 5 317 5.2E-170 T 22-04-2016 APECO1_RS10250 7362b77daffc164d8ecf7143ac195c05 328 Gene3D G3DSA:3.40.50.1100 112 325 3.6E-68 T 22-04-2016 APECO1_RS10250 7362b77daffc164d8ecf7143ac195c05 328 SUPERFAMILY SSF53686 7 326 2.36E-86 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS10250 7362b77daffc164d8ecf7143ac195c05 328 PIRSF PIRSF006278 2 328 2.6E-93 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase APECO1_RS10250 7362b77daffc164d8ecf7143ac195c05 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 5.5E-146 T 22-04-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 APECO1_RS13340 7fa9c590602242bfa753d6922a56337e 445 PIRSF PIRSF002746 2 445 4.0E-147 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS13340 7fa9c590602242bfa753d6922a56337e 445 Pfam PF02447 GntP family permease 7 444 1.5E-165 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS13340 7fa9c590602242bfa753d6922a56337e 445 PANTHER PTHR30354 2 445 0.0 T 22-04-2016 APECO1_RS13340 7fa9c590602242bfa753d6922a56337e 445 PANTHER PTHR30354:SF6 2 445 0.0 T 22-04-2016 APECO1_RS13340 7fa9c590602242bfa753d6922a56337e 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 445 1.4E-175 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 Gene3D G3DSA:3.40.50.970 362 560 2.7E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 Gene3D G3DSA:3.40.50.970 12 185 1.1E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 PANTHER PTHR18968:SF128 1 562 0.0 T 22-04-2016 APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 PANTHER PTHR18968 1 562 0.0 T 22-04-2016 APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 561 9.7E-202 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 6.8E-44 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 Gene3D G3DSA:3.40.50.1220 196 358 9.8E-62 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 SUPERFAMILY SSF52518 10 185 1.47E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 2.0E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 178 3.6E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 SUPERFAMILY SSF52467 165 361 1.64E-56 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS21010 e626319a8259363a81a477e9abcd2fdf 562 SUPERFAMILY SSF52518 366 560 1.91E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 41 310 4.2E-116 T 22-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 6 475 65.268 T 22-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 421 470 2.0E-9 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 3.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 3.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 3.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 91 105 3.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 3.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 PANTHER PTHR22807 1 369 1.1E-256 T 22-04-2016 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 8 105 2.0E-28 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 PANTHER PTHR22807:SF38 1 369 1.1E-256 T 22-04-2016 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 Pfam PF01189 16S rRNA methyltransferase RsmB/F 118 309 4.0E-46 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 188 199 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 Gene3D G3DSA:3.40.50.150 102 310 8.0E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS09825 bc5701ca034f7fedeee16067e65fe4e8 479 SUPERFAMILY SSF53335 7 310 2.01E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS26985 beac38883a410728885571a99a2cc7c6 402 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 1 402 8.8E-207 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 APECO1_RS26985 beac38883a410728885571a99a2cc7c6 402 PANTHER PTHR10196:SF62 1 402 0.0 T 22-04-2016 APECO1_RS26985 beac38883a410728885571a99a2cc7c6 402 Gene3D G3DSA:3.30.420.40 18 188 1.2E-11 T 22-04-2016 APECO1_RS26985 beac38883a410728885571a99a2cc7c6 402 SUPERFAMILY SSF53067 17 190 7.12E-9 T 22-04-2016 APECO1_RS26985 beac38883a410728885571a99a2cc7c6 402 SUPERFAMILY SSF53067 191 401 3.58E-30 T 22-04-2016 APECO1_RS26985 beac38883a410728885571a99a2cc7c6 402 Gene3D G3DSA:3.30.420.40 191 401 2.3E-32 T 22-04-2016 APECO1_RS26985 beac38883a410728885571a99a2cc7c6 402 PANTHER PTHR10196 1 402 0.0 T 22-04-2016 APECO1_RS26985 beac38883a410728885571a99a2cc7c6 402 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 197 401 1.5E-34 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APECO1_RS05325 dfbf7bb2e1063f783c600fa102358560 350 Pfam PF12368 Rhodanase C-terminal 246 307 9.9E-19 T 22-04-2016 IPR022111 Rhodanase, C-terminal APECO1_RS05325 dfbf7bb2e1063f783c600fa102358560 350 Pfam PF00581 Rhodanese-like domain 138 233 1.6E-13 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS05325 dfbf7bb2e1063f783c600fa102358560 350 Gene3D G3DSA:3.40.250.10 117 242 4.5E-37 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS05325 dfbf7bb2e1063f783c600fa102358560 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.65 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 APECO1_RS05325 dfbf7bb2e1063f783c600fa102358560 350 SMART SM00450 136 237 2.9E-24 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS05325 dfbf7bb2e1063f783c600fa102358560 350 SUPERFAMILY SSF52821 115 271 5.11E-32 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS05325 dfbf7bb2e1063f783c600fa102358560 350 PANTHER PTHR22778:SF21 1 322 4.1E-119 T 22-04-2016 APECO1_RS05325 dfbf7bb2e1063f783c600fa102358560 350 PANTHER PTHR22778 1 322 4.1E-119 T 22-04-2016 APECO1_RS01195 300f07d1a95b0c34c8789876bba76926 349 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 23 335 3.2E-86 T 22-04-2016 IPR010732 Type VI secretion, TssG-like APECO1_RS01195 300f07d1a95b0c34c8789876bba76926 349 PANTHER PTHR35564:SF3 5 337 3.4E-116 T 22-04-2016 APECO1_RS01195 300f07d1a95b0c34c8789876bba76926 349 PANTHER PTHR35564 5 337 3.4E-116 T 22-04-2016 APECO1_RS01195 300f07d1a95b0c34c8789876bba76926 349 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 22 335 2.5E-105 T 22-04-2016 IPR010732 Type VI secretion, TssG-like APECO1_RS25870 f14cdb6c9bf7736af9e9fea58b9e5227 83 SUPERFAMILY SSF50677 24 82 9.59E-13 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS25870 f14cdb6c9bf7736af9e9fea58b9e5227 83 Gene3D G3DSA:3.90.740.10 3 82 2.1E-18 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS25870 f14cdb6c9bf7736af9e9fea58b9e5227 83 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 1 82 1.2E-24 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS25870 f14cdb6c9bf7736af9e9fea58b9e5227 83 PANTHER PTHR11946 1 79 5.2E-31 T 22-04-2016 APECO1_RS25870 f14cdb6c9bf7736af9e9fea58b9e5227 83 PANTHER PTHR11946:SF11 1 79 5.2E-31 T 22-04-2016 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 PANTHER PTHR11654:SF159 1 214 1.1E-215 T 22-04-2016 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 PANTHER PTHR11654:SF159 232 375 1.1E-215 T 22-04-2016 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 Hamap MF_01880 Dipeptide permease D [dtpD]. 1 493 63.554 T 22-04-2016 IPR023777 Amino acid/peptide transporter family, dipeptide permease D GO:0005887|GO:0042938 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 PANTHER PTHR11654 1 214 1.1E-215 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 PANTHER PTHR11654 232 375 1.1E-215 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 Pfam PF00854 POT family 77 443 5.2E-96 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 65 89 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 140 152 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 SUPERFAMILY SSF103473 260 480 1.31E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 SUPERFAMILY SSF103473 7 206 1.31E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 Gene3D G3DSA:1.20.1250.20 20 186 1.3E-17 T 22-04-2016 APECO1_RS03420 b4294d26142aeb75d02b73c28be6ba37 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 463 2.8E-79 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APECO1_RS00110 4d5b481a8c01e78fc3dab052c45749e3 299 Gene3D G3DSA:3.40.190.10 97 227 2.6E-7 T 22-04-2016 APECO1_RS00110 4d5b481a8c01e78fc3dab052c45749e3 299 PANTHER PTHR30293:SF2 2 296 3.2E-225 T 22-04-2016 APECO1_RS00110 4d5b481a8c01e78fc3dab052c45749e3 299 PANTHER PTHR30293 2 296 3.2E-225 T 22-04-2016 APECO1_RS00110 4d5b481a8c01e78fc3dab052c45749e3 299 Pfam PF03466 LysR substrate binding domain 96 284 5.3E-12 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS00110 4d5b481a8c01e78fc3dab052c45749e3 299 SUPERFAMILY SSF46785 2 85 1.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS00110 4d5b481a8c01e78fc3dab052c45749e3 299 SUPERFAMILY SSF53850 90 287 1.9E-27 T 22-04-2016 APECO1_RS00110 4d5b481a8c01e78fc3dab052c45749e3 299 Gene3D G3DSA:1.10.10.10 3 83 3.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS00110 4d5b481a8c01e78fc3dab052c45749e3 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS23485 758b4cbd46bb3f351a22f9d9c334ffff 150 Pfam PF06754 Phosphonate metabolism protein PhnG 7 147 2.3E-52 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 APECO1_RS23485 758b4cbd46bb3f351a22f9d9c334ffff 150 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 148 4.8E-54 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 APECO1_RS00210 2ac611afd4e9ae21749323a5914c9e0e 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APECO1_RS00210 2ac611afd4e9ae21749323a5914c9e0e 261 Hamap MF_01051 Carnitinyl-CoA dehydratase [caiD]. 1 261 73.627 T 22-04-2016 IPR022852 Carnitinyl-CoA dehydratase GO:0016836 UniPathway: UPA00117 APECO1_RS00210 2ac611afd4e9ae21749323a5914c9e0e 261 PANTHER PTHR11941 3 258 5.8E-108 T 22-04-2016 APECO1_RS00210 2ac611afd4e9ae21749323a5914c9e0e 261 SUPERFAMILY SSF52096 2 261 7.18E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS00210 2ac611afd4e9ae21749323a5914c9e0e 261 Gene3D G3DSA:3.90.226.10 2 196 1.4E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS00210 2ac611afd4e9ae21749323a5914c9e0e 261 Gene3D G3DSA:1.10.12.10 200 261 1.8E-20 T 22-04-2016 IPR014748 Crontonase, C-terminal APECO1_RS00210 2ac611afd4e9ae21749323a5914c9e0e 261 PANTHER PTHR11941:SF13 3 258 5.8E-108 T 22-04-2016 APECO1_RS00210 2ac611afd4e9ae21749323a5914c9e0e 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 260 6.5E-87 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 PANTHER PTHR13789 416 440 8.6E-86 T 22-04-2016 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 PANTHER PTHR13789 1 170 8.6E-86 T 22-04-2016 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 Gene3D G3DSA:3.40.50.720 1 152 4.6E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 Gene3D G3DSA:3.40.50.720 233 376 1.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF51735 232 376 3.83E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02254 TrkA-N domain 235 350 3.2E-26 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02254 TrkA-N domain 3 111 5.8E-30 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF116726 390 450 1.57E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF51735 1 152 2.99E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02080 TrkA-C domain 157 225 1.6E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 Pfam PF02080 TrkA-C domain 390 451 1.3E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 SUPERFAMILY SSF116726 148 226 1.26E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 PANTHER PTHR13789:SF225 416 440 8.6E-86 T 22-04-2016 APECO1_RS18915 14ae9bf094d37bed1c647b85d7a70d2d 458 PANTHER PTHR13789:SF225 1 170 8.6E-86 T 22-04-2016 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.4E-23 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 Gene3D G3DSA:1.20.120.140 2 89 3.7E-36 T 22-04-2016 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 PANTHER PTHR11564:SF7 1 435 9.2E-282 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 SUPERFAMILY SSF52540 42 354 1.21E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 PANTHER PTHR11564 1 435 9.2E-282 T 22-04-2016 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.2E-182 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 SMART SM00962 100 296 4.1E-120 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 SMART SM00963 1 86 2.4E-37 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 35.006 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 Pfam PF02978 Signal peptide binding domain 329 427 2.1E-33 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.1E-75 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 SMART SM00382 99 247 7.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 Gene3D G3DSA:3.40.50.300 94 297 1.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 SUPERFAMILY SSF47446 329 431 3.6E-39 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APECO1_RS14780 dc53afad12a0f784058f00d211e93e90 453 Gene3D G3DSA:1.10.260.30 329 432 1.6E-41 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APECO1_RS16615 ae93f18cc943ef15f35de3df1997d3c2 425 Gene3D G3DSA:3.90.180.10 4 180 1.3E-16 T 22-04-2016 IPR011032 GroES-like APECO1_RS16615 ae93f18cc943ef15f35de3df1997d3c2 425 PANTHER PTHR11695 14 378 4.1E-193 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS16615 ae93f18cc943ef15f35de3df1997d3c2 425 PANTHER PTHR11695:SF551 14 378 4.1E-193 T 22-04-2016 APECO1_RS16615 ae93f18cc943ef15f35de3df1997d3c2 425 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 97 6.8E-7 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS16615 ae93f18cc943ef15f35de3df1997d3c2 425 Gene3D G3DSA:3.40.50.720 181 314 7.7E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16615 ae93f18cc943ef15f35de3df1997d3c2 425 SUPERFAMILY SSF51735 157 336 1.31E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16615 ae93f18cc943ef15f35de3df1997d3c2 425 Pfam PF00107 Zinc-binding dehydrogenase 186 329 1.8E-17 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS16615 ae93f18cc943ef15f35de3df1997d3c2 425 SUPERFAMILY SSF50129 3 188 1.35E-24 T 22-04-2016 IPR011032 GroES-like APECO1_RS08455 1231383af69607bb78b07a4d2792603e 53 PANTHER PTHR36571:SF2 25 53 1.2E-13 T 22-04-2016 APECO1_RS08455 1231383af69607bb78b07a4d2792603e 53 PANTHER PTHR36571 25 53 1.2E-13 T 22-04-2016 APECO1_RS08455 1231383af69607bb78b07a4d2792603e 53 Pfam PF04076 Bacterial OB fold (BOF) protein 19 53 8.9E-7 T 22-04-2016 IPR005220 Bacterial OB-fold APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Gene3D G3DSA:2.40.50.100 20 82 8.0E-32 T 22-04-2016 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.89E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.89E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.89E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.3E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 PANTHER PTHR15893 1 85 2.6E-52 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.952 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 SUPERFAMILY SSF110324 2 81 5.58E-34 T 22-04-2016 APECO1_RS18375 f2a48cf62f93cb72e86a7a3f4e4c92ad 85 Pfam PF01016 Ribosomal L27 protein 2 82 6.3E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24160 b715da47d04f9735194c841a1b3d28d5 119 Gene3D G3DSA:1.20.1300.10 1 119 1.5E-55 T 22-04-2016 APECO1_RS24160 b715da47d04f9735194c841a1b3d28d5 119 Pfam PF02313 Fumarate reductase subunit D 6 116 6.5E-52 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APECO1_RS24160 b715da47d04f9735194c841a1b3d28d5 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 27.602 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APECO1_RS24160 b715da47d04f9735194c841a1b3d28d5 119 PIRSF PIRSF000179 1 119 3.4E-53 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APECO1_RS24160 b715da47d04f9735194c841a1b3d28d5 119 SUPERFAMILY SSF81343 1 119 2.62E-53 T 22-04-2016 APECO1_RS24160 b715da47d04f9735194c841a1b3d28d5 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 106 8.0E-47 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APECO1_RS25525 67e37daff65b7ce92e78396a9185ae89 357 PANTHER PTHR14226:SF25 1 357 1.3E-169 T 22-04-2016 APECO1_RS25525 67e37daff65b7ce92e78396a9185ae89 357 SUPERFAMILY SSF52151 21 279 1.02E-43 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APECO1_RS25525 67e37daff65b7ce92e78396a9185ae89 357 Pfam PF01734 Patatin-like phospholipase 27 195 3.3E-21 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APECO1_RS25525 67e37daff65b7ce92e78396a9185ae89 357 PANTHER PTHR14226 1 357 1.3E-169 T 22-04-2016 APECO1_RS25525 67e37daff65b7ce92e78396a9185ae89 357 Gene3D G3DSA:3.40.1090.10 27 198 4.3E-7 T 22-04-2016 APECO1_RS02240 f6fe331eede1004b86965d42acd8bb28 90 SMART SM00411 1 90 7.6E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS02240 f6fe331eede1004b86965d42acd8bb28 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APECO1_RS02240 f6fe331eede1004b86965d42acd8bb28 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.2E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS02240 f6fe331eede1004b86965d42acd8bb28 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APECO1_RS02240 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.0E-20 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS02240 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.0E-20 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS02240 f6fe331eede1004b86965d42acd8bb28 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.0E-20 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS02240 f6fe331eede1004b86965d42acd8bb28 90 SUPERFAMILY SSF47729 1 90 4.27E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APECO1_RS02240 f6fe331eede1004b86965d42acd8bb28 90 PANTHER PTHR33175 1 90 1.6E-44 T 22-04-2016 APECO1_RS13715 2062f156fc5e0e2be5af2236d904aa9d 453 PIRSF PIRSF018788 1 453 1.9E-232 T 22-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 APECO1_RS13715 2062f156fc5e0e2be5af2236d904aa9d 453 PANTHER PTHR39329:SF1 1 453 0.0 T 22-04-2016 APECO1_RS13715 2062f156fc5e0e2be5af2236d904aa9d 453 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 1.3E-202 T 22-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 APECO1_RS13715 2062f156fc5e0e2be5af2236d904aa9d 453 Gene3D G3DSA:1.10.220.70 56 141 5.7E-35 T 22-04-2016 APECO1_RS13715 2062f156fc5e0e2be5af2236d904aa9d 453 Gene3D G3DSA:2.30.170.30 1 54 2.7E-26 T 22-04-2016 APECO1_RS13715 2062f156fc5e0e2be5af2236d904aa9d 453 Gene3D G3DSA:3.20.20.70 143 453 8.1E-158 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS13715 2062f156fc5e0e2be5af2236d904aa9d 453 PANTHER PTHR39329 1 453 0.0 T 22-04-2016 APECO1_RS04745 ff733bbe352bf0e4621d4dc24bd3e980 215 SUPERFAMILY SSF56281 2 209 8.12E-61 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS04745 ff733bbe352bf0e4621d4dc24bd3e980 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 8.5E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS04745 ff733bbe352bf0e4621d4dc24bd3e980 215 PANTHER PTHR11935:SF115 1 212 6.9E-140 T 22-04-2016 APECO1_RS04745 ff733bbe352bf0e4621d4dc24bd3e980 215 SMART SM00849 12 192 5.8E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS04745 ff733bbe352bf0e4621d4dc24bd3e980 215 Gene3D G3DSA:3.60.15.10 2 210 4.5E-67 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS04745 ff733bbe352bf0e4621d4dc24bd3e980 215 PANTHER PTHR11935 1 212 6.9E-140 T 22-04-2016 APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 Gene3D G3DSA:1.10.10.10 13 142 9.5E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 SMART SM00347 31 132 3.9E-34 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 Pfam PF01047 MarR family 38 96 4.1E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 PANTHER PTHR33164:SF4 6 143 1.4E-44 T 22-04-2016 APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 SUPERFAMILY SSF46785 4 143 2.33E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 3.2E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 3.2E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 3.2E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 3.2E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 PANTHER PTHR33164 6 143 1.4E-44 T 22-04-2016 APECO1_RS08390 2e40256ffe61cb057a66c807fab85ecd 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 Pfam PF00384 Molybdopterin oxidoreductase 119 576 4.3E-114 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 Gene3D G3DSA:2.40.40.20 670 814 2.0E-59 T 22-04-2016 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 517 534 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 45 3.7E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 Gene3D G3DSA:3.40.50.740 121 206 1.1E-80 T 22-04-2016 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 Gene3D G3DSA:3.40.50.740 411 654 1.1E-80 T 22-04-2016 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 Gene3D G3DSA:2.20.25.90 54 120 6.3E-18 T 22-04-2016 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 731 758 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 Pfam PF01568 Molydopterin dinucleotide binding domain 695 806 5.0E-29 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 SMART SM00926 56 116 1.8E-9 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 SUPERFAMILY SSF53706 57 697 5.1E-183 T 22-04-2016 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 SUPERFAMILY SSF50692 641 814 5.88E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 814 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 PANTHER PTHR11615:SF128 352 814 0.0 T 22-04-2016 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 PANTHER PTHR11615:SF128 5 320 0.0 T 22-04-2016 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 Gene3D G3DSA:3.40.228.10 207 410 7.0E-76 T 22-04-2016 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 116 1.0E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 PANTHER PTHR11615 352 814 0.0 T 22-04-2016 APECO1_RS04390 0fc92d38171b612620dec1aa88d0ca05 814 PANTHER PTHR11615 5 320 0.0 T 22-04-2016 APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 PRINTS PR01387 Cytolethal distending toxin A signature 114 126 9.0E-34 T 22-04-2016 IPR015957 Cytolethal distending toxin A APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 PRINTS PR01387 Cytolethal distending toxin A signature 178 192 9.0E-34 T 22-04-2016 IPR015957 Cytolethal distending toxin A APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 PRINTS PR01387 Cytolethal distending toxin A signature 36 49 9.0E-34 T 22-04-2016 IPR015957 Cytolethal distending toxin A APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 PRINTS PR01387 Cytolethal distending toxin A signature 70 87 9.0E-34 T 22-04-2016 IPR015957 Cytolethal distending toxin A APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 PRINTS PR01387 Cytolethal distending toxin A signature 92 106 9.0E-34 T 22-04-2016 IPR015957 Cytolethal distending toxin A APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 PRINTS PR01387 Cytolethal distending toxin A signature 151 165 9.0E-34 T 22-04-2016 IPR015957 Cytolethal distending toxin A APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 PIRSF PIRSF036516 1 218 4.0E-90 T 22-04-2016 IPR015957 Cytolethal distending toxin A APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 Gene3D G3DSA:2.80.10.50 54 221 5.5E-51 T 22-04-2016 APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 Pfam PF03498 Cytolethal distending toxin A/C domain 63 210 2.0E-52 T 22-04-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 APECO1_RS07740 fb27b2b1da0d020b59cdf2f8a70fab40 237 SUPERFAMILY SSF50370 62 210 3.71E-41 T 22-04-2016 IPR000772 Ricin B, lectin domain APECO1_RS08850 7ef72b0bab2aa4fe67742c1012ed305f 199 Gene3D G3DSA:1.10.357.10 8 194 4.4E-37 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS08850 7ef72b0bab2aa4fe67742c1012ed305f 199 PANTHER PTHR30055:SF20 1 194 2.2E-100 T 22-04-2016 APECO1_RS08850 7ef72b0bab2aa4fe67742c1012ed305f 199 SUPERFAMILY SSF46689 7 78 1.85E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS08850 7ef72b0bab2aa4fe67742c1012ed305f 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 54 2.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS08850 7ef72b0bab2aa4fe67742c1012ed305f 199 PANTHER PTHR30055 1 194 2.2E-100 T 22-04-2016 APECO1_RS08850 7ef72b0bab2aa4fe67742c1012ed305f 199 SUPERFAMILY SSF48498 81 194 2.36E-23 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS08850 7ef72b0bab2aa4fe67742c1012ed305f 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 189 2.3E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS05910 ed52a03907fcc76a2b7df389cfb7eaef 46 ProDom PD026569 PROPHAGE GIFSY-1 3'REGION ORF45 C1558 RUSA LAMBDOID YLCG DLP12 2 46 2.0E-19 T 22-04-2016 APECO1_RS04050 d8921fa8a5904454c4bfe4aca8773c3b 442 PANTHER PTHR10799 323 442 2.8E-16 T 22-04-2016 APECO1_RS04050 d8921fa8a5904454c4bfe4aca8773c3b 442 SUPERFAMILY SSF55073 300 440 3.3E-29 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS04050 d8921fa8a5904454c4bfe4aca8773c3b 442 Gene3D G3DSA:3.30.70.270 297 440 4.6E-31 T 22-04-2016 APECO1_RS04050 d8921fa8a5904454c4bfe4aca8773c3b 442 PANTHER PTHR10799:SF750 323 442 2.8E-16 T 22-04-2016 APECO1_RS04050 d8921fa8a5904454c4bfe4aca8773c3b 442 SMART SM00267 285 442 1.5E-45 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS04050 d8921fa8a5904454c4bfe4aca8773c3b 442 Pfam PF17156 Gammaproteobacterial periplasmic sensor domain 26 229 6.4E-140 T 22-04-2016 IPR033422 Gammaproteobacterial periplasmic sensor domain GAPES2 APECO1_RS04050 d8921fa8a5904454c4bfe4aca8773c3b 442 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 294 439 2.1E-26 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS04050 d8921fa8a5904454c4bfe4aca8773c3b 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 437 2.7E-25 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 Gene3D G3DSA:1.10.1040.10 279 483 8.7E-77 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 PANTHER PTHR30562:SF9 13 484 0.0 T 22-04-2016 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 PRINTS PR00084 Mannitol dehydrogenase signature 245 260 9.6E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 PRINTS PR00084 Mannitol dehydrogenase signature 215 228 9.6E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 PRINTS PR00084 Mannitol dehydrogenase signature 176 189 9.6E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 PRINTS PR00084 Mannitol dehydrogenase signature 24 34 9.6E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 SUPERFAMILY SSF48179 280 483 5.1E-67 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 213 458 6.3E-102 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 Gene3D G3DSA:3.40.50.720 5 278 6.6E-112 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 23 185 1.4E-51 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 PANTHER PTHR30562 13 484 0.0 T 22-04-2016 APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 SUPERFAMILY SSF51735 5 278 5.51E-95 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08480 53b2d3f554ebc9624db7f9eb15bdc61e 486 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 215 227 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS10640 5b0ef17e9d4a641606879964702fa5fd 116 PANTHER PTHR41286 7 114 4.5E-14 T 22-04-2016 APECO1_RS10640 5b0ef17e9d4a641606879964702fa5fd 116 PANTHER PTHR41286:SF1 7 114 4.5E-14 T 22-04-2016 APECO1_RS10640 5b0ef17e9d4a641606879964702fa5fd 116 SMART SM00507 53 107 1.6E-13 T 22-04-2016 IPR003615 HNH nuclease APECO1_RS10640 5b0ef17e9d4a641606879964702fa5fd 116 Pfam PF01844 HNH endonuclease 66 112 8.5E-17 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 APECO1_RS06250 c9f70fecc578ff4f08ca85e8d6b141be 139 Pfam PF00717 Peptidase S24-like 57 120 1.5E-11 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APECO1_RS06250 c9f70fecc578ff4f08ca85e8d6b141be 139 SUPERFAMILY SSF51306 13 135 4.53E-34 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APECO1_RS06250 c9f70fecc578ff4f08ca85e8d6b141be 139 PANTHER PTHR33516:SF1 1 139 1.2E-61 T 22-04-2016 APECO1_RS06250 c9f70fecc578ff4f08ca85e8d6b141be 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 5.2E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APECO1_RS06250 c9f70fecc578ff4f08ca85e8d6b141be 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 5.2E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APECO1_RS06250 c9f70fecc578ff4f08ca85e8d6b141be 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 5.2E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APECO1_RS06250 c9f70fecc578ff4f08ca85e8d6b141be 139 PANTHER PTHR33516 1 139 1.2E-61 T 22-04-2016 APECO1_RS06250 c9f70fecc578ff4f08ca85e8d6b141be 139 Gene3D G3DSA:2.10.109.10 25 138 5.6E-48 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APECO1_RS12550 d67facdd9926113f452c9434af0f6adb 141 Gene3D G3DSA:3.90.79.10 4 125 2.6E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS12550 d67facdd9926113f452c9434af0f6adb 141 Pfam PF00293 NUDIX domain 2 135 4.1E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS12550 d67facdd9926113f452c9434af0f6adb 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-6 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS12550 d67facdd9926113f452c9434af0f6adb 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-6 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS12550 d67facdd9926113f452c9434af0f6adb 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS12550 d67facdd9926113f452c9434af0f6adb 141 SUPERFAMILY SSF55811 2 126 4.47E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS12550 d67facdd9926113f452c9434af0f6adb 141 PANTHER PTHR22769:SF29 1 137 1.1E-98 T 22-04-2016 APECO1_RS12550 d67facdd9926113f452c9434af0f6adb 141 Hamap MF_01846 Nucleoside triphosphatase NudI [nudI]. 1 141 51.786 T 22-04-2016 IPR023781 Nucleoside triphosphatase NudI GO:0016818 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.23+3.6.1.19+3.6.1.12|KEGG: 00983+3.6.1.19|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206 APECO1_RS12550 d67facdd9926113f452c9434af0f6adb 141 PANTHER PTHR22769 1 137 1.1E-98 T 22-04-2016 APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM00116 78 127 4.2 T 22-04-2016 IPR000644 CBS domain APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM00116 141 189 1.6 T 22-04-2016 IPR000644 CBS domain APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 Gene3D G3DSA:3.30.465.10 197 283 4.7E-31 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 PANTHER PTHR22777:SF17 18 292 3.2E-130 T 22-04-2016 APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF00571 CBS domain 141 189 5.8E-5 T 22-04-2016 IPR000644 CBS domain APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF00571 CBS domain 69 124 6.1E-8 T 22-04-2016 IPR000644 CBS domain APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 SMART SM01091 205 283 1.1E-31 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 PANTHER PTHR22777 18 292 3.2E-130 T 22-04-2016 APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 Gene3D G3DSA:3.10.580.10 55 196 1.1E-22 T 22-04-2016 APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 SUPERFAMILY SSF56176 204 289 2.73E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 Pfam PF03471 Transporter associated domain 206 281 2.1E-23 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS03165 1bc1abec4cdd9bfda2cc56666581251f 292 SUPERFAMILY SSF54631 66 202 4.67E-32 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 Gene3D G3DSA:3.50.50.60 106 309 3.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PANTHER PTHR11493 419 834 0.0 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PANTHER PTHR11493 2 256 0.0 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PIRSF PIRSF037149 1 835 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.1E-14 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.1E-14 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.1E-14 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 4.1E-14 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 3.4E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 Gene3D G3DSA:3.50.50.60 2 105 1.3E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 1.3E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 1.3E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.0E-11 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 757 7.1E-15 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 SUPERFAMILY SSF56014 633 808 1.57E-46 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 SUPERFAMILY SSF51905 2 189 3.14E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.8E-11 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.8E-11 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.8E-11 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.8E-11 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 Gene3D G3DSA:3.30.413.10 634 768 1.7E-30 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 SUPERFAMILY SSF51905 144 310 5.7E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PANTHER PTHR11493:SF52 419 834 0.0 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 PANTHER PTHR11493:SF52 2 256 0.0 T 22-04-2016 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 SUPERFAMILY SSF55124 502 627 5.72E-31 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APECO1_RS19310 308185eaa17dfe04333db54ec1a0bf13 847 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 8.3E-15 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APECO1_RS07840 79a5379bf0481424a1be64e362cd306d 663 Pfam PF03797 Autotransporter beta-domain 440 634 1.5E-24 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS07840 79a5379bf0481424a1be64e362cd306d 663 SUPERFAMILY SSF103515 438 663 1.96E-19 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS07840 79a5379bf0481424a1be64e362cd306d 663 Gene3D G3DSA:2.40.128.130 344 613 2.4E-15 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 PANTHER PTHR21071 1 337 1.4E-198 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 SUPERFAMILY SSF56194 202 339 7.85E-52 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 329 1.3E-34 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 SUPERFAMILY SSF56176 3 197 2.04E-50 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 Gene3D G3DSA:3.90.78.10 230 341 2.9E-47 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 Gene3D G3DSA:3.30.465.10 73 229 2.9E-52 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 PANTHER PTHR21071:SF6 1 337 1.4E-198 T 22-04-2016 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 Pfam PF01565 FAD binding domain 18 149 1.2E-26 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 91.717 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 9.9E-131 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS22670 ac1b78d4afa42ba832f07b02abf96f39 342 Gene3D G3DSA:3.30.43.10 3 68 7.1E-28 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 SUPERFAMILY SSF55804 496 634 1.2E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 3.8E-192 T 22-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 PANTHER PTHR30181 1 610 0.0 T 22-04-2016 APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 539 555 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 498 634 8.0E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 Gene3D G3DSA:3.40.50.10370 376 474 3.3E-42 T 22-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 SUPERFAMILY SSF52794 377 466 5.75E-22 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 Gene3D G3DSA:3.40.930.10 497 634 5.2E-44 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 379 453 2.8E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 Pfam PF02378 Phosphotransferase system, EIIC 17 277 1.6E-20 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS20585 15d5e5e0a77842537f299077b8373418 637 PANTHER PTHR30181:SF2 1 610 0.0 T 22-04-2016 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 Gene3D G3DSA:1.10.220.30 8 71 7.2E-15 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 Pfam PF14841 FliG middle domain 115 186 3.0E-24 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 331 7.6E-153 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PIRSF PIRSF003161 1 331 2.1E-118 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 Pfam PF01706 FliG C-terminal domain 218 323 1.4E-37 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 SUPERFAMILY SSF48029 5 104 2.62E-18 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 Pfam PF14842 FliG N-terminal domain 3 103 1.5E-29 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 Gene3D G3DSA:1.10.220.30 74 183 3.3E-28 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 Gene3D G3DSA:1.10.220.30 194 330 2.3E-40 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PANTHER PTHR30534:SF0 1 331 2.0E-112 T 22-04-2016 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 4 20 5.8E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 194 219 5.8E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 33 59 5.8E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 5.8E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 114 137 5.8E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 245 5.8E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 271 297 5.8E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 SUPERFAMILY SSF48029 115 324 9.55E-63 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APECO1_RS10355 142007a5db6d956b34a72e96db840cdf 331 PANTHER PTHR30534 1 331 2.0E-112 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APECO1_RS12320 88b8a29504422d16088e1851e610d178 87 PANTHER PTHR38603 1 87 1.9E-36 T 22-04-2016 APECO1_RS12320 88b8a29504422d16088e1851e610d178 87 Pfam PF03927 NapD protein 5 81 6.6E-26 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly APECO1_RS06545 0b0bf4f1305f9216153bfac86a8062a8 302 PANTHER PTHR22572:SF118 10 296 4.2E-150 T 22-04-2016 APECO1_RS06545 0b0bf4f1305f9216153bfac86a8062a8 302 Gene3D G3DSA:3.90.550.10 9 281 1.3E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS06545 0b0bf4f1305f9216153bfac86a8062a8 302 PANTHER PTHR22572 10 296 4.2E-150 T 22-04-2016 APECO1_RS06545 0b0bf4f1305f9216153bfac86a8062a8 302 SUPERFAMILY SSF53448 9 291 1.04E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS06545 0b0bf4f1305f9216153bfac86a8062a8 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 2.8E-116 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 APECO1_RS06545 0b0bf4f1305f9216153bfac86a8062a8 302 Pfam PF00483 Nucleotidyl transferase 10 276 1.9E-25 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APECO1_RS12485 d3717007ab885d8e9f816e5a1a3e9bcd 358 Gene3D G3DSA:3.20.20.190 32 355 4.5E-96 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APECO1_RS12485 d3717007ab885d8e9f816e5a1a3e9bcd 358 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 350 5.8E-79 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APECO1_RS12485 d3717007ab885d8e9f816e5a1a3e9bcd 358 SUPERFAMILY SSF51695 32 356 7.59E-95 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APECO1_RS12485 d3717007ab885d8e9f816e5a1a3e9bcd 358 PANTHER PTHR23344 8 356 4.8E-120 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APECO1_RS12485 d3717007ab885d8e9f816e5a1a3e9bcd 358 PANTHER PTHR23344:SF7 8 356 4.8E-120 T 22-04-2016 APECO1_RS22270 b3c13ddf30a4a5d43cf93f94be287943 419 PANTHER PTHR30268 1 419 2.1E-226 T 22-04-2016 APECO1_RS22270 b3c13ddf30a4a5d43cf93f94be287943 419 SUPERFAMILY SSF51658 4 418 2.98E-83 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS22270 b3c13ddf30a4a5d43cf93f94be287943 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 3 418 1.7E-238 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 APECO1_RS22270 b3c13ddf30a4a5d43cf93f94be287943 419 Gene3D G3DSA:3.20.20.150 2 418 1.5E-228 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS22270 b3c13ddf30a4a5d43cf93f94be287943 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 278.593 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 APECO1_RS22270 b3c13ddf30a4a5d43cf93f94be287943 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 22-04-2016 APECO1_RS22270 b3c13ddf30a4a5d43cf93f94be287943 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 1.8E-249 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 APECO1_RS12715 f9cf5ef975a24d6cd284ebce2bd80383 220 Gene3D G3DSA:3.40.50.700 47 174 5.6E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APECO1_RS12715 f9cf5ef975a24d6cd284ebce2bd80383 220 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 64 170 3.4E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APECO1_RS12715 f9cf5ef975a24d6cd284ebce2bd80383 220 SUPERFAMILY SSF56770 35 185 2.09E-65 T 22-04-2016 APECO1_RS12715 f9cf5ef975a24d6cd284ebce2bd80383 220 PANTHER PTHR11995 2 216 1.1E-145 T 22-04-2016 APECO1_RS12715 f9cf5ef975a24d6cd284ebce2bd80383 220 PANTHER PTHR11995:SF14 2 216 1.1E-145 T 22-04-2016 APECO1_RS12715 f9cf5ef975a24d6cd284ebce2bd80383 220 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 42.699 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APECO1_RS12715 f9cf5ef975a24d6cd284ebce2bd80383 220 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APECO1_RS12715 f9cf5ef975a24d6cd284ebce2bd80383 220 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 37 178 8.0E-71 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APECO1_RS14420 dc34466c5f7c76b58457641e95fdcd6c 397 Gene3D G3DSA:1.10.10.10 9 68 3.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS14420 dc34466c5f7c76b58457641e95fdcd6c 397 Gene3D G3DSA:3.30.420.40 79 217 9.4E-25 T 22-04-2016 APECO1_RS14420 dc34466c5f7c76b58457641e95fdcd6c 397 PANTHER PTHR18964 59 352 2.8E-57 T 22-04-2016 APECO1_RS14420 dc34466c5f7c76b58457641e95fdcd6c 397 Pfam PF00480 ROK family 116 337 2.9E-32 T 22-04-2016 IPR000600 ROK family APECO1_RS14420 dc34466c5f7c76b58457641e95fdcd6c 397 PANTHER PTHR18964:SF123 59 352 2.8E-57 T 22-04-2016 APECO1_RS14420 dc34466c5f7c76b58457641e95fdcd6c 397 Gene3D G3DSA:3.30.420.40 218 351 1.3E-38 T 22-04-2016 APECO1_RS14420 dc34466c5f7c76b58457641e95fdcd6c 397 SUPERFAMILY SSF53067 81 202 1.3E-16 T 22-04-2016 APECO1_RS14420 dc34466c5f7c76b58457641e95fdcd6c 397 SUPERFAMILY SSF46785 10 68 3.49E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS14420 dc34466c5f7c76b58457641e95fdcd6c 397 SUPERFAMILY SSF53067 206 392 1.85E-35 T 22-04-2016 APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 Gene3D G3DSA:3.40.190.10 182 279 4.7E-28 T 22-04-2016 APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 PANTHER PTHR30118 1 319 1.1E-229 T 22-04-2016 APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 PANTHER PTHR30118:SF11 1 319 1.1E-229 T 22-04-2016 APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 Pfam PF03466 LysR substrate binding domain 111 313 3.5E-16 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 Gene3D G3DSA:1.10.10.10 2 88 7.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 SUPERFAMILY SSF53850 98 314 3.39E-27 T 22-04-2016 APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.8E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 SUPERFAMILY SSF46785 7 86 1.36E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 Gene3D G3DSA:3.40.190.10 290 318 3.4E-16 T 22-04-2016 APECO1_RS21200 bc9574f5a7cd2e79b75b5158443d1db1 319 Gene3D G3DSA:3.40.190.10 98 181 3.4E-16 T 22-04-2016 APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 Pfam PF01047 MarR family 29 87 1.3E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 PANTHER PTHR33164:SF16 9 141 3.9E-27 T 22-04-2016 APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.2E-28 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.2E-28 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.2E-28 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.2E-28 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 PANTHER PTHR33164 9 141 3.9E-27 T 22-04-2016 APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 SMART SM00347 22 123 4.0E-32 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 45.82 T 22-04-2016 IPR023071 Transcriptional regulator, SlyA APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 Gene3D G3DSA:1.10.10.10 3 137 1.6E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08815 a3bf28657cefbddba0e39f0da47f1c95 144 SUPERFAMILY SSF46785 4 139 7.67E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20350 4f8d0265948b59c62afeaedf29ecc11e 402 Pfam PF07690 Major Facilitator Superfamily 26 231 5.2E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS20350 4f8d0265948b59c62afeaedf29ecc11e 402 TIGRFAM TIGR00890 2A0111: oxalate/formate antiporter family transporter 9 383 1.3E-141 T 22-04-2016 IPR004741 Oxalate/formate antiporter family transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS20350 4f8d0265948b59c62afeaedf29ecc11e 402 SUPERFAMILY SSF103473 8 393 1.23E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS20350 4f8d0265948b59c62afeaedf29ecc11e 402 Gene3D G3DSA:1.20.1250.20 8 194 6.2E-19 T 22-04-2016 APECO1_RS20350 4f8d0265948b59c62afeaedf29ecc11e 402 PANTHER PTHR11360:SF3 6 399 3.9E-100 T 22-04-2016 APECO1_RS20350 4f8d0265948b59c62afeaedf29ecc11e 402 PANTHER PTHR11360 6 399 3.9E-100 T 22-04-2016 APECO1_RS20350 4f8d0265948b59c62afeaedf29ecc11e 402 Gene3D G3DSA:1.20.1250.20 209 392 3.1E-21 T 22-04-2016 APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 5.5E-210 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 SUPERFAMILY SSF56762 1 552 2.75E-169 T 22-04-2016 IPR029014 NiFe hydrogenase-like APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 Gene3D G3DSA:1.10.645.10 1 552 1.6E-210 T 22-04-2016 IPR029014 NiFe hydrogenase-like APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 PANTHER PTHR11993:SF26 351 558 2.5E-217 T 22-04-2016 APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 PANTHER PTHR11993:SF26 1 116 2.5E-217 T 22-04-2016 APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 PANTHER PTHR11993:SF26 186 255 2.5E-217 T 22-04-2016 APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 PANTHER PTHR11993 351 558 2.5E-217 T 22-04-2016 APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 PANTHER PTHR11993 1 116 2.5E-217 T 22-04-2016 APECO1_RS17400 d90a1ebb127f654db3d4a7c56ce5df07 567 PANTHER PTHR11993 186 255 2.5E-217 T 22-04-2016 APECO1_RS20315 462381d1f9177a9af316dab6fb71b1f4 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 1.5E-16 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APECO1_RS20315 462381d1f9177a9af316dab6fb71b1f4 300 PANTHER PTHR30465:SF10 10 300 6.9E-146 T 22-04-2016 APECO1_RS20315 462381d1f9177a9af316dab6fb71b1f4 300 PANTHER PTHR30465 10 300 6.9E-146 T 22-04-2016 APECO1_RS20315 462381d1f9177a9af316dab6fb71b1f4 300 Gene3D G3DSA:1.10.3720.10 88 296 2.4E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS20315 462381d1f9177a9af316dab6fb71b1f4 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 1.3E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS20315 462381d1f9177a9af316dab6fb71b1f4 300 SUPERFAMILY SSF161098 93 280 6.41E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 145 7.2E-19 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 Pfam PF12019 Type II transport protein GspH 44 145 1.6E-9 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 Gene3D G3DSA:3.55.40.10 40 159 8.5E-14 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 1.6E-20 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 PRINTS PR00885 Bacterial general secretion pathway protein H signature 122 137 1.6E-20 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 1.6E-20 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 1.1E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 PANTHER PTHR30093 1 139 8.7E-72 T 22-04-2016 APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 SUPERFAMILY SSF54523 7 124 6.91E-13 T 22-04-2016 APECO1_RS19120 ac7b3a82762e0e57e12d5848d71f0edb 169 PANTHER PTHR30093:SF8 1 139 8.7E-72 T 22-04-2016 APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 Gene3D G3DSA:3.30.390.10 1 119 4.1E-51 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 SUPERFAMILY SSF51604 98 388 5.24E-78 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 PANTHER PTHR13794 1 148 1.6E-282 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 PANTHER PTHR13794 183 404 1.6E-282 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 Gene3D G3DSA:3.20.20.120 120 367 4.6E-86 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 SMART SM00922 128 259 8.4E-16 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 110 9.2E-34 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 PANTHER PTHR13794:SF61 1 148 1.6E-282 T 22-04-2016 APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 PANTHER PTHR13794:SF61 183 404 1.6E-282 T 22-04-2016 APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 SUPERFAMILY SSF54826 1 112 1.47E-32 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS22595 d323072707ead9b298ab83d9365b0f18 404 Pfam PF13378 Enolase C-terminal domain-like 142 379 8.7E-42 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS05475 7c6aaccf740c2d4f0225162ca586f938 106 ProDom PD078424 YCEQ 1 82 1.0E-43 T 22-04-2016 IPR020371 Uncharacterised protein family YceQ APECO1_RS05475 7c6aaccf740c2d4f0225162ca586f938 106 Pfam PF10848 Protein of unknown function (DUF2655) 1 82 1.1E-60 T 22-04-2016 IPR020371 Uncharacterised protein family YceQ APECO1_RS23120 8c77ad5b925e33c21979b6da9c383b9c 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 257 1.0E-53 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APECO1_RS23120 8c77ad5b925e33c21979b6da9c383b9c 259 Gene3D G3DSA:3.90.226.10 2 253 3.4E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS23120 8c77ad5b925e33c21979b6da9c383b9c 259 SUPERFAMILY SSF52096 1 257 1.12E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS23120 8c77ad5b925e33c21979b6da9c383b9c 259 PANTHER PTHR11941 2 256 1.4E-81 T 22-04-2016 APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 SUPERFAMILY SSF53383 74 450 4.03E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 PANTHER PTHR11986:SF75 18 457 1.6E-245 T 22-04-2016 APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 Pfam PF00202 Aminotransferase class-III 74 449 9.8E-105 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 268 305 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 Gene3D G3DSA:3.90.1150.10 340 452 3.9E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 Hamap MF_01276 Putrescine aminotransferase [patA]. 1 459 91.077 T 22-04-2016 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440|UniPathway: UPA00188 APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 PANTHER PTHR11986 18 457 1.6E-245 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 PIRSF PIRSF000521 54 452 9.3E-46 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 Gene3D G3DSA:3.40.640.10 100 339 1.5E-92 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS17875 f988a7a06ca57f5cd7bd1d2d3449f849 459 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 8 449 3.5E-296 T 22-04-2016 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440|UniPathway: UPA00188 APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 Gene3D G3DSA:3.40.50.720 2 163 7.7E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 2.6E-25 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 PANTHER PTHR22981 4 292 4.2E-89 T 22-04-2016 APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 Hamap MF_01913 3-sulfolactaldehyde reductase. 1 292 56.073 T 22-04-2016 IPR030876 3-sulfolactaldehyde reductase GO:0061596|GO:1902777 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|MetaCyc: PWY-7446 APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 160 3.4E-45 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 Gene3D G3DSA:1.10.1040.10 164 291 2.2E-34 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 PIRSF PIRSF000103 1 292 9.3E-116 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 SUPERFAMILY SSF51735 1 162 1.73E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22135 df438d96d040bdbf450dc54f58d85175 292 SUPERFAMILY SSF48179 164 291 2.15E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 1.4E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 SUPERFAMILY SSF111369 57 107 9.68E-8 T 22-04-2016 APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 SUPERFAMILY SSF111369 136 178 9.68E-8 T 22-04-2016 APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 PANTHER PTHR30386 1 376 1.5E-211 T 22-04-2016 APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 SUPERFAMILY SSF111369 195 268 7.85E-8 T 22-04-2016 APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 3.2E-149 T 22-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 345 2.4E-18 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 PANTHER PTHR30386:SF6 1 376 1.5E-211 T 22-04-2016 APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 Gene3D G3DSA:2.40.50.100 215 248 1.3E-17 T 22-04-2016 APECO1_RS15280 f443e90d36740b58fe0f16f4d18eb491 390 Gene3D G3DSA:2.40.50.100 60 94 1.3E-17 T 22-04-2016 APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 Gene3D G3DSA:3.30.70.20 36 72 1.6E-10 T 22-04-2016 APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 SUPERFAMILY SSF54862 33 158 5.44E-18 T 22-04-2016 APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 Gene3D G3DSA:3.30.70.20 73 159 1.7E-13 T 22-04-2016 APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 37 48 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 69 80 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 Pfam PF13187 4Fe-4S dicluster domain 37 82 1.2E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 PANTHER PTHR24960 1 160 2.2E-74 T 22-04-2016 APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 Pfam PF12800 4Fe-4S binding domain 101 118 0.6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 PANTHER PTHR24960:SF46 1 160 2.2E-74 T 22-04-2016 APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 7 157 7.5E-75 T 22-04-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 APECO1_RS12325 cad22991413e0146a109f188c8615ed5 164 Pfam PF00037 4Fe-4S binding domain 136 157 4.9E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.7E-34 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 SMART SM01383 42 118 1.9E-48 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 PANTHER PTHR13691 1 273 6.8E-149 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.144 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 8.5E-56 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:2.30.30.30 119 195 2.4E-34 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 SUPERFAMILY SSF50104 126 269 1.44E-59 T 22-04-2016 IPR008991 Translation protein SH3-like domain APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 SMART SM01382 124 251 7.5E-90 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 SUPERFAMILY SSF50249 3 125 5.14E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:2.40.50.140 1 114 8.9E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 PIRSF PIRSF002158 12 273 1.1E-100 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 3.6E-132 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APECO1_RS19055 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:4.10.950.10 196 272 1.8E-34 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 SUPERFAMILY SSF47384 217 291 5.89E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 SMART SM00388 233 293 7.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 2.8E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 SUPERFAMILY SSF55874 292 444 3.41E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 SMART SM00304 180 232 6.2E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 7.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 7.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 7.7E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 2.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 Gene3D G3DSA:3.30.565.10 292 443 9.9E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 PANTHER PTHR24423 174 438 3.7E-59 T 22-04-2016 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 PANTHER PTHR24423 1 12 3.7E-59 T 22-04-2016 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 Gene3D G3DSA:1.10.287.130 223 288 2.5E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 Pfam PF00672 HAMP domain 162 226 3.2E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS19480 b8ea213c84e50a351d0cbf3c2281cf06 450 SMART SM00387 332 440 2.1E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS00700 b33785388ed7fee27027fd1c6f05e055 256 PANTHER PTHR30413:SF2 2 256 3.2E-167 T 22-04-2016 APECO1_RS00700 b33785388ed7fee27027fd1c6f05e055 256 PIRSF PIRSF006648 11 252 4.4E-22 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS00700 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS00700 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS00700 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS00700 b33785388ed7fee27027fd1c6f05e055 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS00700 b33785388ed7fee27027fd1c6f05e055 256 Pfam PF01061 ABC-2 type transporter 9 218 2.6E-39 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APECO1_RS00700 b33785388ed7fee27027fd1c6f05e055 256 PANTHER PTHR30413 2 256 3.2E-167 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS09840 9294379fb39031a3ad5781eb5bdb079c 218 SUPERFAMILY SSF56300 17 217 1.73E-42 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS09840 9294379fb39031a3ad5781eb5bdb079c 218 Gene3D G3DSA:3.60.21.10 9 218 1.5E-44 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS09840 9294379fb39031a3ad5781eb5bdb079c 218 Pfam PF00149 Calcineurin-like phosphoesterase 18 155 8.5E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS09840 9294379fb39031a3ad5781eb5bdb079c 218 PANTHER PTHR24032 4 212 5.8E-52 T 22-04-2016 APECO1_RS09840 9294379fb39031a3ad5781eb5bdb079c 218 PANTHER PTHR24032:SF33 4 212 5.8E-52 T 22-04-2016 APECO1_RS09840 9294379fb39031a3ad5781eb5bdb079c 218 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 76 81 - T 22-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 APECO1_RS19975 3cbba275622efc23cbd37c27bf9080af 374 Pfam PF12698 ABC-2 family transporter protein 26 363 6.1E-31 T 22-04-2016 APECO1_RS19975 3cbba275622efc23cbd37c27bf9080af 374 PANTHER PTHR30294 1 373 9.9E-271 T 22-04-2016 APECO1_RS19975 3cbba275622efc23cbd37c27bf9080af 374 PANTHER PTHR30294:SF22 1 373 9.9E-271 T 22-04-2016 APECO1_RS12235 bb9e1d30a9bde594fc5e8f9edb841fa4 161 Gene3D G3DSA:2.40.128.130 69 158 1.9E-14 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS12235 bb9e1d30a9bde594fc5e8f9edb841fa4 161 SUPERFAMILY SSF51126 3 64 1.63E-5 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS12235 bb9e1d30a9bde594fc5e8f9edb841fa4 161 Pfam PF03212 Pertactin 24 64 1.0E-11 T 22-04-2016 IPR004899 Pertactin, central region APECO1_RS12235 bb9e1d30a9bde594fc5e8f9edb841fa4 161 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 29 157 2.5E-23 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APECO1_RS12235 bb9e1d30a9bde594fc5e8f9edb841fa4 161 SUPERFAMILY SSF103515 77 158 5.1E-9 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS12235 bb9e1d30a9bde594fc5e8f9edb841fa4 161 Gene3D G3DSA:2.160.20.20 27 65 2.6E-7 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like APECO1_RS12235 bb9e1d30a9bde594fc5e8f9edb841fa4 161 PANTHER PTHR12338:SF7 72 144 5.1E-15 T 22-04-2016 APECO1_RS12235 bb9e1d30a9bde594fc5e8f9edb841fa4 161 PANTHER PTHR12338 72 144 5.1E-15 T 22-04-2016 APECO1_RS12985 3c0cc588e8ee6550e95a814c34406eb6 161 PANTHER PTHR23029:SF49 1 77 4.3E-31 T 22-04-2016 APECO1_RS12985 3c0cc588e8ee6550e95a814c34406eb6 161 PANTHER PTHR23029:SF49 127 156 4.3E-31 T 22-04-2016 APECO1_RS12985 3c0cc588e8ee6550e95a814c34406eb6 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 71 1.4E-7 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APECO1_RS12985 3c0cc588e8ee6550e95a814c34406eb6 161 Gene3D G3DSA:3.40.50.1240 1 157 5.2E-43 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS12985 3c0cc588e8ee6550e95a814c34406eb6 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 3.8E-65 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- APECO1_RS12985 3c0cc588e8ee6550e95a814c34406eb6 161 SUPERFAMILY SSF53254 1 143 2.14E-18 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS12985 3c0cc588e8ee6550e95a814c34406eb6 161 PANTHER PTHR23029 1 77 4.3E-31 T 22-04-2016 APECO1_RS12985 3c0cc588e8ee6550e95a814c34406eb6 161 PANTHER PTHR23029 127 156 4.3E-31 T 22-04-2016 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 Gene3D G3DSA:2.70.20.10 219 252 1.5E-49 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 Gene3D G3DSA:2.70.20.10 369 488 1.5E-49 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 645 70.785 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 649 0.0 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 SUPERFAMILY SSF56712 1 607 2.35E-189 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 SMART SM00437 280 558 9.6E-110 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 Pfam PF01751 Toprim domain 3 135 1.1E-17 T 22-04-2016 IPR006171 Toprim domain APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 7.6E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 7.6E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 7.6E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 7.6E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 7.6E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 Gene3D G3DSA:3.40.50.140 1 154 5.6E-47 T 22-04-2016 IPR006171 Toprim domain APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 PANTHER PTHR11390:SF21 521 617 1.1E-205 T 22-04-2016 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 PANTHER PTHR11390:SF21 1 503 1.1E-205 T 22-04-2016 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 Gene3D G3DSA:1.10.460.10 490 607 5.0E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 Gene3D G3DSA:1.10.460.10 158 217 5.0E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 SMART SM00493 1 124 2.9E-31 T 22-04-2016 IPR006171 Toprim domain APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 SMART SM00436 128 223 2.1E-37 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 Pfam PF01131 DNA topoisomerase 158 593 3.0E-114 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 PANTHER PTHR11390 521 617 1.1E-205 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS09440 443a14a6c9b9c0cb7436279362d0e1b0 651 PANTHER PTHR11390 1 503 1.1E-205 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APECO1_RS23520 1512a40ad5cca850b01958b24c4753fa 742 Gene3D G3DSA:3.40.50.300 69 169 6.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23520 1512a40ad5cca850b01958b24c4753fa 742 Gene3D G3DSA:3.40.50.300 207 345 6.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23520 1512a40ad5cca850b01958b24c4753fa 742 Pfam PF00350 Dynamin family 73 277 5.0E-17 T 22-04-2016 IPR022812 Dynamin superfamily APECO1_RS23520 1512a40ad5cca850b01958b24c4753fa 742 SUPERFAMILY SSF52540 207 349 1.25E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23520 1512a40ad5cca850b01958b24c4753fa 742 SUPERFAMILY SSF52540 57 168 1.25E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 SUPERFAMILY SSF51735 17 260 7.49E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PANTHER PTHR24322:SF378 23 150 5.6E-52 T 22-04-2016 APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PANTHER PTHR24322:SF378 166 198 5.6E-52 T 22-04-2016 APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 4.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 4.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 4.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PANTHER PTHR24322 23 150 5.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PANTHER PTHR24322 166 198 5.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 28 258 9.6E-56 T 22-04-2016 APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 Gene3D G3DSA:3.40.50.720 14 259 1.3E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 7.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 7.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 7.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 7.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 7.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS15725 c85b8a17d5f55e36fa23044243da7fb5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 7.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 353 9.9E-142 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 PANTHER PTHR30531:SF0 1 360 2.0E-164 T 22-04-2016 APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 SUPERFAMILY SSF160544 243 350 6.28E-41 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 346 2.5E-124 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 1.1E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 1.1E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 1.1E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 1.1E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 1.1E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 Gene3D G3DSA:3.40.1690.10 217 354 7.5E-64 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal APECO1_RS10060 36ddf91a7766eedf1234be2973689fbd 382 PANTHER PTHR30531 1 360 2.0E-164 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APECO1_RS10555 69274b337558f5d5a5ab86c70ae04f1c 247 Gene3D G3DSA:3.40.140.10 5 114 7.7E-16 T 22-04-2016 APECO1_RS10555 69274b337558f5d5a5ab86c70ae04f1c 247 PANTHER PTHR34858:SF1 3 230 4.5E-65 T 22-04-2016 APECO1_RS10555 69274b337558f5d5a5ab86c70ae04f1c 247 SUPERFAMILY SSF54001 101 226 4.71E-17 T 22-04-2016 APECO1_RS10555 69274b337558f5d5a5ab86c70ae04f1c 247 Pfam PF00877 NlpC/P60 family 111 223 9.6E-14 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS10555 69274b337558f5d5a5ab86c70ae04f1c 247 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 98 7.7E-13 T 22-04-2016 IPR028090 JAB domain, prokaryotic APECO1_RS10555 69274b337558f5d5a5ab86c70ae04f1c 247 SUPERFAMILY SSF102712 6 97 1.23E-15 T 22-04-2016 APECO1_RS10555 69274b337558f5d5a5ab86c70ae04f1c 247 Gene3D G3DSA:3.90.1720.10 115 226 4.4E-17 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS10555 69274b337558f5d5a5ab86c70ae04f1c 247 PANTHER PTHR34858 3 230 4.5E-65 T 22-04-2016 APECO1_RS19750 149cdd7fd3756335058aa70001b1e9ad 295 PANTHER PTHR32243:SF13 5 293 1.9E-117 T 22-04-2016 APECO1_RS19750 149cdd7fd3756335058aa70001b1e9ad 295 PANTHER PTHR32243 5 293 1.9E-117 T 22-04-2016 APECO1_RS19750 149cdd7fd3756335058aa70001b1e9ad 295 Gene3D G3DSA:1.10.3720.10 62 291 1.1E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19750 149cdd7fd3756335058aa70001b1e9ad 295 SUPERFAMILY SSF161098 56 282 2.22E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19750 149cdd7fd3756335058aa70001b1e9ad 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 293 4.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 SMART SM00382 42 225 5.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 Pfam PF08402 TOBE domain 292 372 2.2E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 Gene3D G3DSA:3.40.50.300 9 253 2.0E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 SUPERFAMILY SSF52540 17 258 3.08E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 5.1E-169 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 PANTHER PTHR24220 19 303 1.3E-158 T 22-04-2016 APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 Pfam PF00005 ABC transporter 35 174 3.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 SUPERFAMILY SSF50331 250 364 1.36E-7 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS05680 38f7511d9857273cdf239a9bf8ca47f8 378 PANTHER PTHR24220:SF150 19 303 1.3E-158 T 22-04-2016 APECO1_RS17385 9cc3236bfa628299a63b3cc724ffa37d 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.126 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APECO1_RS17385 9cc3236bfa628299a63b3cc724ffa37d 113 PANTHER PTHR34535:SF2 2 113 3.4E-63 T 22-04-2016 APECO1_RS17385 9cc3236bfa628299a63b3cc724ffa37d 113 PIRSF PIRSF004761 1 113 2.5E-36 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APECO1_RS17385 9cc3236bfa628299a63b3cc724ffa37d 113 PANTHER PTHR34535 2 113 3.4E-63 T 22-04-2016 APECO1_RS17385 9cc3236bfa628299a63b3cc724ffa37d 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 22-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site APECO1_RS17385 9cc3236bfa628299a63b3cc724ffa37d 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 2.4E-31 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APECO1_RS17385 9cc3236bfa628299a63b3cc724ffa37d 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.8E-44 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APECO1_RS18695 36871dcfe1571efa43dd6a24b6f8caf0 156 Gene3D G3DSA:2.40.50.100 80 156 2.2E-32 T 22-04-2016 APECO1_RS18695 36871dcfe1571efa43dd6a24b6f8caf0 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 22-04-2016 IPR001882 Biotin-binding site APECO1_RS18695 36871dcfe1571efa43dd6a24b6f8caf0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 2.0E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APECO1_RS18695 36871dcfe1571efa43dd6a24b6f8caf0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 2.0E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APECO1_RS18695 36871dcfe1571efa43dd6a24b6f8caf0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 2.0E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APECO1_RS18695 36871dcfe1571efa43dd6a24b6f8caf0 156 PANTHER PTHR23151 1 156 1.0E-52 T 22-04-2016 APECO1_RS18695 36871dcfe1571efa43dd6a24b6f8caf0 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 1.4E-72 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APECO1_RS18695 36871dcfe1571efa43dd6a24b6f8caf0 156 Pfam PF00364 Biotin-requiring enzyme 83 155 9.0E-25 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APECO1_RS18695 36871dcfe1571efa43dd6a24b6f8caf0 156 SUPERFAMILY SSF51230 81 156 5.76E-26 T 22-04-2016 IPR011053 Single hybrid motif APECO1_RS05565 7ea2ad358c7a60ce89ad2ff6e46e1c66 119 Pfam PF01230 HIT domain 12 107 2.3E-29 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APECO1_RS05565 7ea2ad358c7a60ce89ad2ff6e46e1c66 119 PRINTS PR00332 Histidine triad family signature 6 22 6.0E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APECO1_RS05565 7ea2ad358c7a60ce89ad2ff6e46e1c66 119 PRINTS PR00332 Histidine triad family signature 95 105 6.0E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APECO1_RS05565 7ea2ad358c7a60ce89ad2ff6e46e1c66 119 PRINTS PR00332 Histidine triad family signature 27 45 6.0E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APECO1_RS05565 7ea2ad358c7a60ce89ad2ff6e46e1c66 119 PANTHER PTHR23089 2 107 2.6E-48 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APECO1_RS05565 7ea2ad358c7a60ce89ad2ff6e46e1c66 119 SUPERFAMILY SSF54197 3 113 3.87E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APECO1_RS05565 7ea2ad358c7a60ce89ad2ff6e46e1c66 119 Gene3D G3DSA:3.30.428.10 3 109 5.0E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APECO1_RS05565 7ea2ad358c7a60ce89ad2ff6e46e1c66 119 PANTHER PTHR23089:SF2 2 107 2.6E-48 T 22-04-2016 APECO1_RS05565 7ea2ad358c7a60ce89ad2ff6e46e1c66 119 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site APECO1_RS20010 5c3e9984919757f7cc69deb288ba224a 144 SUPERFAMILY SSF52402 3 139 1.59E-32 T 22-04-2016 APECO1_RS20010 5c3e9984919757f7cc69deb288ba224a 144 Gene3D G3DSA:3.40.50.620 3 139 7.3E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS20010 5c3e9984919757f7cc69deb288ba224a 144 PIRSF PIRSF006276 1 141 3.4E-54 T 22-04-2016 IPR006015 Universal stress protein A APECO1_RS20010 5c3e9984919757f7cc69deb288ba224a 144 Pfam PF00582 Universal stress protein family 3 138 2.4E-21 T 22-04-2016 IPR006016 UspA GO:0006950 APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.571 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 1.0E-16 T 22-04-2016 APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF54747 3 73 5.49E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 SUPERFAMILY SSF46906 68 141 1.09E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:1.10.10.250 73 141 1.5E-30 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 3.2E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 Gene3D G3DSA:3.30.1550.10 2 72 9.8E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 PANTHER PTHR11661 1 142 1.6E-75 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.1E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APECO1_RS22725 8db149aa24ca533fb58ad37447a8e174 142 SMART SM00649 9 141 4.6E-84 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APECO1_RS08305 0559b00812f5d004647d5cf74d80bde3 187 Gene3D G3DSA:2.60.40.1090 37 186 4.3E-43 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS08305 0559b00812f5d004647d5cf74d80bde3 187 Pfam PF00419 Fimbrial protein 39 186 1.6E-20 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS08305 0559b00812f5d004647d5cf74d80bde3 187 SUPERFAMILY SSF49401 39 186 1.79E-36 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS08305 0559b00812f5d004647d5cf74d80bde3 187 PANTHER PTHR33420 1 187 4.9E-45 T 22-04-2016 APECO1_RS24155 afa22a43ee8dcd64e160ccff16c9cc7b 377 SUPERFAMILY SSF56601 22 376 1.33E-104 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS24155 afa22a43ee8dcd64e160ccff16c9cc7b 377 PANTHER PTHR22935:SF64 17 377 4.2E-72 T 22-04-2016 APECO1_RS24155 afa22a43ee8dcd64e160ccff16c9cc7b 377 PANTHER PTHR22935 17 377 4.2E-72 T 22-04-2016 APECO1_RS24155 afa22a43ee8dcd64e160ccff16c9cc7b 377 ProSitePatterns PS00336 Beta-lactamase class-C active site. 76 83 - T 22-04-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 APECO1_RS24155 afa22a43ee8dcd64e160ccff16c9cc7b 377 Pfam PF00144 Beta-lactamase 30 376 2.3E-87 T 22-04-2016 IPR001466 Beta-lactamase-related APECO1_RS24155 afa22a43ee8dcd64e160ccff16c9cc7b 377 Gene3D G3DSA:3.40.710.10 22 376 1.1E-95 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS08410 b95670c1ee4260a3d043db70593ca58f 557 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 152 552 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APECO1_RS08410 b95670c1ee4260a3d043db70593ca58f 557 PANTHER PTHR38762 121 557 3.4E-122 T 22-04-2016 APECO1_RS08410 b95670c1ee4260a3d043db70593ca58f 557 Pfam PF02264 LamB porin 147 557 9.0E-75 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APECO1_RS08410 b95670c1ee4260a3d043db70593ca58f 557 SUPERFAMILY SSF56935 145 557 1.16E-93 T 22-04-2016 APECO1_RS08410 b95670c1ee4260a3d043db70593ca58f 557 Gene3D G3DSA:2.40.170.10 145 557 1.8E-108 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APECO1_RS08410 b95670c1ee4260a3d043db70593ca58f 557 Pfam PF11471 Maltoporin periplasmic N-terminal extension 10 55 1.9E-10 T 22-04-2016 IPR021570 LamB-type porin N-terminal domain APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 3.0E-121 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 SUPERFAMILY SSF53927 221 529 2.71E-131 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 SUPERFAMILY SSF52335 7 197 4.97E-73 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 Gene3D G3DSA:3.40.140.20 253 371 1.3E-50 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 PANTHER PTHR11692 5 529 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 SMART SM00798 137 461 9.7E-219 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 Pfam PF02142 MGS-like domain 19 132 1.4E-31 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.756 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.5E-273 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 Gene3D G3DSA:3.40.140.20 377 519 9.1E-61 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 SMART SM00851 19 132 3.4E-64 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 Gene3D G3DSA:3.40.50.1380 5 190 1.4E-87 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS22840 240f6985bb775f50c7f0b8e6029004d0 529 PIRSF PIRSF000414 1 529 1.1E-229 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APECO1_RS24515 e30d4794bd724a9a49164d3423b2dde9 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APECO1_RS24515 e30d4794bd724a9a49164d3423b2dde9 246 PANTHER PTHR20854 1 243 7.4E-88 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS24515 e30d4794bd724a9a49164d3423b2dde9 246 Pfam PF00459 Inositol monophosphatase family 5 233 4.5E-49 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS24515 e30d4794bd724a9a49164d3423b2dde9 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APECO1_RS24515 e30d4794bd724a9a49164d3423b2dde9 246 Gene3D G3DSA:3.30.540.10 1 147 4.3E-45 T 22-04-2016 APECO1_RS24515 e30d4794bd724a9a49164d3423b2dde9 246 SUPERFAMILY SSF56655 1 243 2.36E-76 T 22-04-2016 APECO1_RS24515 e30d4794bd724a9a49164d3423b2dde9 246 PANTHER PTHR20854:SF5 1 243 7.4E-88 T 22-04-2016 APECO1_RS24515 e30d4794bd724a9a49164d3423b2dde9 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 5.1E-114 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 APECO1_RS24515 e30d4794bd724a9a49164d3423b2dde9 246 Gene3D G3DSA:3.40.190.80 148 243 1.5E-41 T 22-04-2016 APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 SMART SM00922 184 284 2.8E-15 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 PANTHER PTHR13794:SF47 6 151 1.3E-243 T 22-04-2016 APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 PANTHER PTHR13794:SF47 172 430 1.3E-243 T 22-04-2016 APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 SUPERFAMILY SSF51604 138 415 1.61E-84 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 Pfam PF13378 Enolase C-terminal domain-like 187 404 7.4E-40 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 SUPERFAMILY SSF54826 7 136 1.77E-31 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 111 136 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 Gene3D G3DSA:3.30.390.10 8 123 5.0E-17 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 Gene3D G3DSA:3.20.20.120 124 397 1.6E-104 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 136 9.2E-8 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 PANTHER PTHR13794 6 151 1.3E-243 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS15815 7bb40c5a41da2175882ebf4fbffc45d9 446 PANTHER PTHR13794 172 430 1.3E-243 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 3.1E-110 T 22-04-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 PANTHER PTHR24220 324 529 4.9E-136 T 22-04-2016 APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 Gene3D G3DSA:3.40.50.300 322 530 2.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 Pfam PF00664 ABC transporter transmembrane region 42 197 2.3E-5 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 SUPERFAMILY SSF90123 4 299 1.83E-26 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 SUPERFAMILY SSF52540 315 530 4.37E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 Pfam PF00005 ABC transporter 341 477 1.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 SMART SM00382 348 526 2.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 Gene3D G3DSA:1.20.1560.10 9 303 2.5E-20 T 22-04-2016 APECO1_RS12345 20fee60214ed08af27adefc3155cdda6 547 PANTHER PTHR24220:SF425 324 529 4.9E-136 T 22-04-2016 APECO1_RS12040 2c242910cb3cdf4137502dac1ebc7215 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 33.703 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APECO1_RS12040 2c242910cb3cdf4137502dac1ebc7215 222 Gene3D G3DSA:1.10.286.10 4 86 2.5E-32 T 22-04-2016 APECO1_RS12040 2c242910cb3cdf4137502dac1ebc7215 222 Gene3D G3DSA:3.30.1130.10 92 220 6.5E-51 T 22-04-2016 APECO1_RS12040 2c242910cb3cdf4137502dac1ebc7215 222 PANTHER PTHR11109 1 222 3.0E-104 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APECO1_RS12040 2c242910cb3cdf4137502dac1ebc7215 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APECO1_RS12040 2c242910cb3cdf4137502dac1ebc7215 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APECO1_RS12040 2c242910cb3cdf4137502dac1ebc7215 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 1.5E-86 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APECO1_RS12040 2c242910cb3cdf4137502dac1ebc7215 222 SUPERFAMILY SSF55620 4 221 1.11E-76 T 22-04-2016 APECO1_RS12040 2c242910cb3cdf4137502dac1ebc7215 222 Pfam PF01227 GTP cyclohydrolase I 41 218 2.7E-62 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 SUPERFAMILY SSF141868 493 728 2.35E-65 T 22-04-2016 IPR001633 EAL domain APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 Pfam PF00563 EAL domain 493 724 4.8E-59 T 22-04-2016 IPR001633 EAL domain APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 SMART SM00267 315 473 3.2E-24 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 PANTHER PTHR33121:SF11 125 415 0.0 T 22-04-2016 APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 PANTHER PTHR33121:SF11 442 729 0.0 T 22-04-2016 APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 Pfam PF05231 MASE1 16 314 8.1E-58 T 22-04-2016 IPR007895 MASE1 APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 SUPERFAMILY SSF55073 331 436 4.55E-5 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 Gene3D G3DSA:3.20.20.450 493 728 1.7E-63 T 22-04-2016 IPR001633 EAL domain APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 SMART SM00052 487 729 1.8E-95 T 22-04-2016 IPR001633 EAL domain APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 PANTHER PTHR33121 125 415 0.0 T 22-04-2016 APECO1_RS13490 a66ebfbdd0255adabe1b82aee1330ee5 729 PANTHER PTHR33121 442 729 0.0 T 22-04-2016 APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 SUPERFAMILY SSF52540 827 1034 2.72E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 Pfam PF13476 AAA domain 5 217 4.1E-28 T 22-04-2016 APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 PANTHER PTHR32114:SF2 2 1046 2.7E-150 T 22-04-2016 APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 Pfam PF13558 Putative exonuclease SbcCD, C subunit 930 1001 2.5E-15 T 22-04-2016 APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 Gene3D G3DSA:3.40.50.300 791 792 1.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 Gene3D G3DSA:3.40.50.300 1 175 1.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 Gene3D G3DSA:3.40.50.300 910 1034 1.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1039 0.0 T 22-04-2016 IPR004592 Nuclease SbcC, gammaproteobacteria type APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 PANTHER PTHR32114 2 1046 2.7E-150 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 SUPERFAMILY SSF52540 253 419 3.36E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 SUPERFAMILY SSF52540 1 58 3.36E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 Gene3D G3DSA:3.40.50.300 217 275 1.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02020 3a41e923146f15f6784ee938940532dd 1047 SUPERFAMILY SSF52540 1 182 2.72E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 164 190 2.1E-35 T 22-04-2016 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 267 321 2.1E-35 T 22-04-2016 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 22-04-2016 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PANTHER PTHR19375:SF117 9 336 2.7E-191 T 22-04-2016 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 22-04-2016 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.90.640.10 191 263 8.7E-31 T 22-04-2016 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PANTHER PTHR19375 9 336 2.7E-191 T 22-04-2016 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.6E-171 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 9 163 1.8E-46 T 22-04-2016 APECO1_RS18660 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Pfam PF06723 MreB/Mbl protein 11 338 1.4E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 8.0E-56 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 SUPERFAMILY SSF53671 2 332 3.54E-99 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 Gene3D G3DSA:3.40.50.1370 144 319 1.5E-73 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 83.475 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PANTHER PTHR11405:SF42 1 276 3.3E-243 T 22-04-2016 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PANTHER PTHR11405:SF42 297 333 3.3E-243 T 22-04-2016 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PANTHER PTHR11405 1 276 3.3E-243 T 22-04-2016 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PANTHER PTHR11405 297 333 3.3E-243 T 22-04-2016 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.4E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.4E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.4E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.4E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 1.0E-138 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 Gene3D G3DSA:3.40.50.1370 4 143 4.9E-58 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.3E-47 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 5.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 5.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 5.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 5.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS24695 46e8a1600ea22aeddafb11b6eddfa82f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 5.9E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 161 1.1E-17 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 PANTHER PTHR14021 1 166 1.1E-63 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 Gene3D G3DSA:1.10.287.110 1 78 3.8E-27 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 25.025 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 1.7E-68 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 PANTHER PTHR14021:SF15 1 166 1.1E-63 T 22-04-2016 APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 SMART SM00271 1 66 7.9E-9 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 SUPERFAMILY SSF46565 1 75 9.03E-18 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 Gene3D G3DSA:1.20.1280.20 81 170 1.0E-31 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 APECO1_RS14335 faf6c0209a96fd32e79e56c86c191611 171 SUPERFAMILY SSF47144 77 170 7.06E-26 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 1.2E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 39.237 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 PANTHER PTHR11958:SF49 7 427 1.5E-271 T 22-04-2016 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 Gene3D G3DSA:1.10.3860.10 6 406 3.8E-120 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 SUPERFAMILY SSF118215 9 401 1.31E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 PANTHER PTHR11958 7 427 1.5E-271 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.1E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 1.1E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 1.1E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.1E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.1E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.1E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS20220 db885011d46d91b8651a954e01f487be 428 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 1.1E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 SUPERFAMILY SSF55347 608 791 6.34E-48 T 22-04-2016 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 SUPERFAMILY SSF53633 12 299 2.62E-56 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 Gene3D G3DSA:3.40.1160.10 114 298 2.1E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 Gene3D G3DSA:3.40.1160.10 12 59 2.1E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 Gene3D G3DSA:3.40.50.720 457 628 1.8E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 PANTHER PTHR21499 386 810 1.4E-250 T 22-04-2016 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 Pfam PF00742 Homoserine dehydrogenase 608 803 4.4E-45 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 PANTHER PTHR21499:SF29 386 810 1.4E-250 T 22-04-2016 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 SUPERFAMILY SSF51735 457 630 3.55E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 Pfam PF00696 Amino acid kinase family 12 284 1.6E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 8.3E-27 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 Gene3D G3DSA:3.30.360.10 629 786 7.0E-53 T 22-04-2016 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 453 2.3E-63 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS22465 528a0fd21f5efbe084365bdd959c1b67 810 PIRSF PIRSF000727 12 810 3.7E-304 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 SUPERFAMILY SSF47781 470 558 5.0E-28 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Gene3D G3DSA:3.30.420.140 328 450 7.5E-50 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 PANTHER PTHR10724:SF1 1 759 0.0 T 22-04-2016 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 SMART SM00732 327 424 1.0E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 SMART SM00316 649 720 1.0E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Pfam PF00575 S1 RNA binding domain 649 720 4.2E-24 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Gene3D G3DSA:1.10.10.650 2 110 2.2E-46 T 22-04-2016 IPR023319 Tex-like protein, HTH domain APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Pfam PF16921 Tex protein YqgF-like domain 328 451 1.7E-50 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 PANTHER PTHR10724 1 759 0.0 T 22-04-2016 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.4E-28 T 22-04-2016 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 SUPERFAMILY SSF53098 323 469 9.36E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Gene3D G3DSA:2.40.50.140 634 720 3.9E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Gene3D G3DSA:1.10.3500.10 111 323 6.0E-105 T 22-04-2016 IPR023323 Tex-like domain APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Gene3D G3DSA:1.10.3500.10 451 498 6.0E-105 T 22-04-2016 IPR023323 Tex-like domain APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 SUPERFAMILY SSF47781 560 632 5.56E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 SUPERFAMILY SSF158832 2 322 1.14E-121 T 22-04-2016 APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 SUPERFAMILY SSF50249 638 723 3.36E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Gene3D G3DSA:1.10.150.310 499 630 1.6E-48 T 22-04-2016 IPR023097 Tex RuvX-like domain APECO1_RS19495 4f3fc35a1c7ecd1199794b7f2a6773c8 773 Pfam PF09371 Tex-like protein N-terminal domain 10 194 6.7E-70 T 22-04-2016 IPR018974 Tex-like protein, N-terminal APECO1_RS02795 1b2ce3fc66d1f5314bd2551fc7556b58 82 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 1.6E-44 T 22-04-2016 IPR010590 Protein of unknown function DUF1158 APECO1_RS02795 1b2ce3fc66d1f5314bd2551fc7556b58 82 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 1 82 2.0E-28 T 22-04-2016 IPR010590 Protein of unknown function DUF1158 APECO1_RS18100 9d0bcd0fd0837fdb501400c28e0dff64 444 PANTHER PTHR11662 4 444 4.6E-236 T 22-04-2016 APECO1_RS18100 9d0bcd0fd0837fdb501400c28e0dff64 444 Gene3D G3DSA:1.20.1250.20 243 441 5.3E-35 T 22-04-2016 APECO1_RS18100 9d0bcd0fd0837fdb501400c28e0dff64 444 PANTHER PTHR11662:SF18 4 444 4.6E-236 T 22-04-2016 APECO1_RS18100 9d0bcd0fd0837fdb501400c28e0dff64 444 SUPERFAMILY SSF103473 6 443 1.24E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS18100 9d0bcd0fd0837fdb501400c28e0dff64 444 PIRSF PIRSF002808 2 444 4.0E-36 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS18100 9d0bcd0fd0837fdb501400c28e0dff64 444 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 25 434 1.7E-137 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS18100 9d0bcd0fd0837fdb501400c28e0dff64 444 Pfam PF07690 Major Facilitator Superfamily 23 365 3.5E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS18100 9d0bcd0fd0837fdb501400c28e0dff64 444 Gene3D G3DSA:1.20.1250.20 15 214 2.8E-45 T 22-04-2016 APECO1_RS04190 871e57acd61164ecb3799e3d96dfe186 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 1.8E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04190 871e57acd61164ecb3799e3d96dfe186 222 PANTHER PTHR30614:SF10 1 221 1.1E-158 T 22-04-2016 APECO1_RS04190 871e57acd61164ecb3799e3d96dfe186 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 2.8E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS04190 871e57acd61164ecb3799e3d96dfe186 222 SUPERFAMILY SSF161098 6 201 1.57E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04190 871e57acd61164ecb3799e3d96dfe186 222 PANTHER PTHR30614 1 221 1.1E-158 T 22-04-2016 APECO1_RS04190 871e57acd61164ecb3799e3d96dfe186 222 Gene3D G3DSA:1.10.3720.10 4 214 3.8E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS10190 bf94dd6b0d29d5a0baed2911e06ec564 221 Gene3D G3DSA:3.10.450.50 187 219 1.5E-12 T 22-04-2016 IPR032710 NTF2-like domain APECO1_RS10190 bf94dd6b0d29d5a0baed2911e06ec564 221 PANTHER PTHR33747 1 221 1.1E-187 T 22-04-2016 APECO1_RS10190 bf94dd6b0d29d5a0baed2911e06ec564 221 Pfam PF02810 SEC-C motif 203 220 1.7E-10 T 22-04-2016 IPR004027 SEC-C motif APECO1_RS10190 bf94dd6b0d29d5a0baed2911e06ec564 221 SUPERFAMILY SSF103642 201 220 1.05E-7 T 22-04-2016 APECO1_RS10190 bf94dd6b0d29d5a0baed2911e06ec564 221 SUPERFAMILY SSF101327 14 182 2.88E-23 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APECO1_RS10190 bf94dd6b0d29d5a0baed2911e06ec564 221 PANTHER PTHR33747:SF2 1 221 1.1E-187 T 22-04-2016 APECO1_RS10190 bf94dd6b0d29d5a0baed2911e06ec564 221 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 183 1.7E-35 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APECO1_RS10190 bf94dd6b0d29d5a0baed2911e06ec564 221 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 182 2.8E-55 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 Pfam PF02541 Ppx/GppA phosphatase family 26 308 5.3E-105 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 Gene3D G3DSA:3.30.420.40 5 131 5.8E-41 T 22-04-2016 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 SUPERFAMILY SSF53067 13 133 1.3E-35 T 22-04-2016 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 PIRSF PIRSF001267 3 506 1.0E-204 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 SUPERFAMILY SSF53067 137 310 1.3E-47 T 22-04-2016 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 PANTHER PTHR30005 1 512 4.6E-272 T 22-04-2016 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 3.9E-96 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 Gene3D G3DSA:3.30.420.150 132 311 1.1E-52 T 22-04-2016 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 PANTHER PTHR30005:SF4 1 512 4.6E-272 T 22-04-2016 APECO1_RS13930 2421f9ce637269efdde42df52115e903 513 SUPERFAMILY SSF109604 313 507 1.78E-58 T 22-04-2016 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 11 135 1.3E-50 T 22-04-2016 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 PANTHER PTHR11964 1 376 2.1E-290 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 3 109 1.29E-47 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 112 232 7.46E-52 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 60.288 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.2E-45 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 244 381 4.2E-72 T 22-04-2016 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 SUPERFAMILY SSF55973 233 382 9.03E-72 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 5.7E-70 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 Gene3D G3DSA:3.30.300.10 136 233 4.4E-44 T 22-04-2016 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 PIRSF PIRSF000497 1 382 2.4E-176 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.6E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 1.5E-201 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS16675 6e54240b246735d5a285824d43665226 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS05745 25884ac4e860a7673cb5d1cb187a5c2e 78 Pfam PF07825 Excisionase-like protein 5 73 4.5E-6 T 22-04-2016 IPR012884 Excisionase-like GO:0003677|GO:0006310 APECO1_RS05745 25884ac4e860a7673cb5d1cb187a5c2e 78 Gene3D G3DSA:1.10.1660.20 4 78 6.3E-13 T 22-04-2016 IPR012884 Excisionase-like GO:0003677|GO:0006310 APECO1_RS05745 25884ac4e860a7673cb5d1cb187a5c2e 78 SUPERFAMILY SSF46955 4 78 1.61E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS02765 1b02e5609745042867e0ac594281af95 407 Pfam PF00529 HlyD membrane-fusion protein of T1SS 94 378 4.6E-11 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS02765 1b02e5609745042867e0ac594281af95 407 Gene3D G3DSA:2.40.50.100 207 238 1.2E-7 T 22-04-2016 APECO1_RS02765 1b02e5609745042867e0ac594281af95 407 Gene3D G3DSA:2.40.50.100 124 155 1.2E-7 T 22-04-2016 APECO1_RS02765 1b02e5609745042867e0ac594281af95 407 PANTHER PTHR30097:SF5 13 404 2.0E-139 T 22-04-2016 APECO1_RS02765 1b02e5609745042867e0ac594281af95 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 203 391 4.4E-30 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS02765 1b02e5609745042867e0ac594281af95 407 SUPERFAMILY SSF111369 118 318 1.24E-10 T 22-04-2016 APECO1_RS02765 1b02e5609745042867e0ac594281af95 407 PANTHER PTHR30097 13 404 2.0E-139 T 22-04-2016 APECO1_RS02765 1b02e5609745042867e0ac594281af95 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 313 1.6E-58 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS07580 749ab00c4909f333cf0f172c92eac7e0 71 PIRSF PIRSF030786 1 71 3.1E-46 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS07580 749ab00c4909f333cf0f172c92eac7e0 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 9.8E-51 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS05925 749ab00c4909f333cf0f172c92eac7e0 71 PIRSF PIRSF030786 1 71 3.1E-46 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS05925 749ab00c4909f333cf0f172c92eac7e0 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 9.8E-51 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS10210 a52a7859fbfd934bc77137489798d420 182 PANTHER PTHR14269:SF13 2 179 2.3E-101 T 22-04-2016 APECO1_RS10210 a52a7859fbfd934bc77137489798d420 182 PANTHER PTHR14269 2 179 2.3E-101 T 22-04-2016 APECO1_RS10210 a52a7859fbfd934bc77137489798d420 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 7.9E-18 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APECO1_RS10210 a52a7859fbfd934bc77137489798d420 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.88 T 22-04-2016 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APECO1_RS10210 a52a7859fbfd934bc77137489798d420 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 181 1.6E-66 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APECO1_RS10210 a52a7859fbfd934bc77137489798d420 182 PIRSF PIRSF000847 1 179 7.2E-43 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APECO1_RS10210 a52a7859fbfd934bc77137489798d420 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 PANTHER PTHR23151 124 630 1.4E-276 T 22-04-2016 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Pfam PF00364 Biotin-requiring enzyme 4 73 1.8E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Pfam PF00364 Biotin-requiring enzyme 207 277 4.1E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Pfam PF00364 Biotin-requiring enzyme 107 176 6.2E-23 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 SUPERFAMILY SSF51230 206 298 1.31E-23 T 22-04-2016 IPR011053 Single hybrid motif APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 SUPERFAMILY SSF52777 388 629 8.45E-80 T 22-04-2016 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 2.4E-79 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 SUPERFAMILY SSF47005 321 366 2.22E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 229 258 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Gene3D G3DSA:3.30.559.10 389 630 5.6E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 180 630 1.0E-242 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 SUPERFAMILY SSF51230 105 197 1.44E-23 T 22-04-2016 IPR011053 Single hybrid motif APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 SUPERFAMILY SSF51230 1 93 5.23E-23 T 22-04-2016 IPR011053 Single hybrid motif APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Gene3D G3DSA:4.10.320.10 319 367 2.0E-22 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Pfam PF02817 e3 binding domain 327 362 2.1E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 PANTHER PTHR23151:SF68 124 630 1.4E-276 T 22-04-2016 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Gene3D G3DSA:2.40.50.100 1 94 5.8E-22 T 22-04-2016 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Gene3D G3DSA:2.40.50.100 206 298 2.3E-22 T 22-04-2016 APECO1_RS00635 91d940a2a4aac2c2a9e5661cd6e62095 630 Gene3D G3DSA:2.40.50.100 107 182 2.8E-23 T 22-04-2016 APECO1_RS17800 e933f38c54e844615df09466b8372c27 122 Gene3D G3DSA:3.30.1130.10 1 115 5.8E-43 T 22-04-2016 APECO1_RS17800 e933f38c54e844615df09466b8372c27 122 SMART SM00905 4 114 5.9E-46 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS17800 e933f38c54e844615df09466b8372c27 122 Pfam PF02152 Dihydroneopterin aldolase 4 113 5.1E-32 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS17800 e933f38c54e844615df09466b8372c27 122 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 5.5E-42 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS17800 e933f38c54e844615df09466b8372c27 122 SUPERFAMILY SSF55620 1 115 4.45E-36 T 22-04-2016 APECO1_RS17800 e933f38c54e844615df09466b8372c27 122 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.8E-27 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS17800 e933f38c54e844615df09466b8372c27 122 PANTHER PTHR20941 1 115 1.1E-39 T 22-04-2016 APECO1_RS17365 1959f613426ad100db0ab7d26d64bba8 499 PANTHER PTHR11101 2 499 0.0 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APECO1_RS17365 1959f613426ad100db0ab7d26d64bba8 499 PANTHER PTHR11101:SF59 2 499 0.0 T 22-04-2016 APECO1_RS17365 1959f613426ad100db0ab7d26d64bba8 499 Pfam PF01384 Phosphate transporter family 206 488 2.1E-44 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APECO1_RS17365 1959f613426ad100db0ab7d26d64bba8 499 Pfam PF01384 Phosphate transporter family 30 182 2.3E-36 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APECO1_RS08975 0e14ec61eef8bea160a6ea7883729d30 222 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 124 135 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS08975 0e14ec61eef8bea160a6ea7883729d30 222 PANTHER PTHR11938 1 198 3.0E-115 T 22-04-2016 APECO1_RS08975 0e14ec61eef8bea160a6ea7883729d30 222 SUPERFAMILY SSF54862 34 219 4.92E-51 T 22-04-2016 APECO1_RS08975 0e14ec61eef8bea160a6ea7883729d30 222 PANTHER PTHR11938:SF104 1 198 3.0E-115 T 22-04-2016 APECO1_RS08975 0e14ec61eef8bea160a6ea7883729d30 222 Pfam PF13247 4Fe-4S dicluster domain 84 180 3.8E-22 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS08975 0e14ec61eef8bea160a6ea7883729d30 222 Gene3D G3DSA:3.30.70.20 100 150 7.3E-24 T 22-04-2016 APECO1_RS08975 0e14ec61eef8bea160a6ea7883729d30 222 Gene3D G3DSA:3.30.70.20 151 187 2.5E-25 T 22-04-2016 APECO1_RS08975 0e14ec61eef8bea160a6ea7883729d30 222 Gene3D G3DSA:3.30.70.20 36 99 2.5E-25 T 22-04-2016 APECO1_RS22755 753b832a2065e98b4841e3426a6d0acb 377 Pfam PF04055 Radical SAM superfamily 82 220 9.5E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS22755 753b832a2065e98b4841e3426a6d0acb 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 1.6E-159 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 APECO1_RS22755 753b832a2065e98b4841e3426a6d0acb 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 2.1E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS22755 753b832a2065e98b4841e3426a6d0acb 377 Gene3D G3DSA:3.20.20.70 36 361 2.3E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS22755 753b832a2065e98b4841e3426a6d0acb 377 SMART SM00876 258 361 1.5E-26 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS22755 753b832a2065e98b4841e3426a6d0acb 377 PANTHER PTHR22976:SF17 1 376 5.4E-235 T 22-04-2016 APECO1_RS22755 753b832a2065e98b4841e3426a6d0acb 377 SUPERFAMILY SSF102114 36 363 5.1E-52 T 22-04-2016 APECO1_RS22755 753b832a2065e98b4841e3426a6d0acb 377 PANTHER PTHR22976 1 376 5.4E-235 T 22-04-2016 APECO1_RS06685 c2e45c61f6be9bdbfbc338fb9fc21c7d 51 ProDom PD019047 YDFA YDAF PROPHAGE ECS2210 ECS2767 ECS1505 STY2067 1 49 2.0E-21 T 22-04-2016 IPR009821 Protein of unknown function DUF1391 APECO1_RS06685 c2e45c61f6be9bdbfbc338fb9fc21c7d 51 Pfam PF07151 Protein of unknown function (DUF1391) 2 48 3.2E-33 T 22-04-2016 IPR009821 Protein of unknown function DUF1391 APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 SUPERFAMILY SSF53850 116 297 1.09E-17 T 22-04-2016 APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 Pfam PF03466 LysR substrate binding domain 137 299 1.2E-9 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 SUPERFAMILY SSF46785 8 91 3.16E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 PANTHER PTHR30118 1 298 2.5E-180 T 22-04-2016 APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 5.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 Gene3D G3DSA:1.10.10.10 5 89 4.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 9.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 9.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 9.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 Gene3D G3DSA:3.40.190.10 176 270 1.1E-6 T 22-04-2016 APECO1_RS02940 f8d494c4226e7bf1bba58fe243cfe877 300 PANTHER PTHR30118:SF2 1 298 2.5E-180 T 22-04-2016 APECO1_RS07425 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 72.982 T 22-04-2016 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 APECO1_RS07425 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 PANTHER PTHR21535 3 327 9.2E-50 T 22-04-2016 APECO1_RS07425 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Gene3D G3DSA:1.20.58.340 251 327 2.3E-18 T 22-04-2016 APECO1_RS07425 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 SUPERFAMILY SSF143865 8 255 1.22E-48 T 22-04-2016 APECO1_RS07425 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Gene3D G3DSA:1.20.58.340 147 244 2.7E-15 T 22-04-2016 APECO1_RS07425 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 8.4E-65 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APECO1_RS07425 c18e44d18f3dbd7d6c77a6fdd2e62b77 327 SUPERFAMILY SSF144083 263 324 4.71E-13 T 22-04-2016 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 Gene3D G3DSA:3.40.605.10 6 265 5.2E-104 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.421 T 22-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 SUPERFAMILY SSF53720 4 482 9.69E-172 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 Gene3D G3DSA:3.40.309.10 266 444 8.2E-68 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 PANTHER PTHR11699:SF115 1 483 0.0 T 22-04-2016 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 PANTHER PTHR11699 1 483 0.0 T 22-04-2016 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 6.9E-246 T 22-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 APECO1_RS01670 28f78deb3d556028fb9a59b72659f8e8 490 Pfam PF00171 Aldehyde dehydrogenase family 17 479 4.5E-178 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS08780 c38a128b19036289075542a1e54e3eee 201 SUPERFAMILY SSF47616 83 199 6.82E-30 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS08780 c38a128b19036289075542a1e54e3eee 201 PANTHER PTHR11260:SF154 1 196 5.2E-136 T 22-04-2016 APECO1_RS08780 c38a128b19036289075542a1e54e3eee 201 SUPERFAMILY SSF52833 1 79 3.53E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS08780 c38a128b19036289075542a1e54e3eee 201 Gene3D G3DSA:1.20.1050.10 89 188 9.3E-41 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS08780 c38a128b19036289075542a1e54e3eee 201 PANTHER PTHR11260 1 196 5.2E-136 T 22-04-2016 APECO1_RS08780 c38a128b19036289075542a1e54e3eee 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 9.7E-18 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APECO1_RS08780 c38a128b19036289075542a1e54e3eee 201 Gene3D G3DSA:3.40.30.10 1 88 4.3E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS08780 c38a128b19036289075542a1e54e3eee 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 16 80 5.9E-9 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APECO1_RS16070 c7db01b9837273bf5dbe5614ab797025 586 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 7 583 2.0E-190 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like APECO1_RS16070 c7db01b9837273bf5dbe5614ab797025 586 PANTHER PTHR35370:SF4 2 586 4.4E-267 T 22-04-2016 APECO1_RS16070 c7db01b9837273bf5dbe5614ab797025 586 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 583 1.3E-174 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like APECO1_RS16070 c7db01b9837273bf5dbe5614ab797025 586 PIRSF PIRSF028304 1 585 7.2E-163 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like APECO1_RS16070 c7db01b9837273bf5dbe5614ab797025 586 PANTHER PTHR35370 2 586 4.4E-267 T 22-04-2016 APECO1_RS16425 144367ea07dc08896c67c7eb2d10e016 236 Pfam PF13098 Thioredoxin-like domain 104 226 1.2E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS16425 144367ea07dc08896c67c7eb2d10e016 236 PANTHER PTHR35272 5 236 7.5E-117 T 22-04-2016 APECO1_RS16425 144367ea07dc08896c67c7eb2d10e016 236 PANTHER PTHR35272:SF3 5 236 7.5E-117 T 22-04-2016 APECO1_RS16425 144367ea07dc08896c67c7eb2d10e016 236 Gene3D G3DSA:3.10.450.70 21 81 2.2E-27 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal APECO1_RS16425 144367ea07dc08896c67c7eb2d10e016 236 SUPERFAMILY SSF54423 22 80 1.44E-18 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APECO1_RS16425 144367ea07dc08896c67c7eb2d10e016 236 SUPERFAMILY SSF52833 85 230 2.09E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS16425 144367ea07dc08896c67c7eb2d10e016 236 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 75 6.5E-15 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APECO1_RS16425 144367ea07dc08896c67c7eb2d10e016 236 ProSitePatterns PS00194 Thioredoxin family active site. 110 128 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APECO1_RS16425 144367ea07dc08896c67c7eb2d10e016 236 Gene3D G3DSA:3.40.30.10 98 231 2.1E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS05075 0deac7eed1b56ac93421d54513714945 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 41.307 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APECO1_RS05075 0deac7eed1b56ac93421d54513714945 198 Pfam PF03358 NADPH-dependent FMN reductase 13 143 4.1E-14 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APECO1_RS05075 0deac7eed1b56ac93421d54513714945 198 Gene3D G3DSA:3.40.50.360 1 197 6.6E-74 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS05075 0deac7eed1b56ac93421d54513714945 198 PANTHER PTHR30546 1 197 6.4E-140 T 22-04-2016 APECO1_RS05075 0deac7eed1b56ac93421d54513714945 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 7.9E-106 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APECO1_RS05075 0deac7eed1b56ac93421d54513714945 198 SUPERFAMILY SSF52218 1 197 1.3E-62 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS05075 0deac7eed1b56ac93421d54513714945 198 PANTHER PTHR30546:SF10 1 197 6.4E-140 T 22-04-2016 APECO1_RS25125 e467d28436861f3ab319ced454276311 340 SMART SM00829 10 310 6.4E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS25125 e467d28436861f3ab319ced454276311 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS25125 e467d28436861f3ab319ced454276311 340 Pfam PF00107 Zinc-binding dehydrogenase 173 300 1.5E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS25125 e467d28436861f3ab319ced454276311 340 Gene3D G3DSA:3.40.50.720 166 284 1.5E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS25125 e467d28436861f3ab319ced454276311 340 SUPERFAMILY SSF51735 139 304 5.98E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS25125 e467d28436861f3ab319ced454276311 340 SUPERFAMILY SSF50129 3 172 3.8E-51 T 22-04-2016 IPR011032 GroES-like APECO1_RS25125 e467d28436861f3ab319ced454276311 340 PANTHER PTHR11695:SF38 15 340 4.1E-122 T 22-04-2016 APECO1_RS25125 e467d28436861f3ab319ced454276311 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 133 4.5E-34 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS25125 e467d28436861f3ab319ced454276311 340 PANTHER PTHR11695 15 340 4.1E-122 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS25125 e467d28436861f3ab319ced454276311 340 Gene3D G3DSA:3.90.180.10 1 165 9.8E-56 T 22-04-2016 IPR011032 GroES-like APECO1_RS15875 b0f66b06c4153c17dbc1889bb680b8da 382 Gene3D G3DSA:1.20.1090.10 186 382 3.2E-72 T 22-04-2016 APECO1_RS15875 b0f66b06c4153c17dbc1889bb680b8da 382 SUPERFAMILY SSF56796 7 382 8.24E-125 T 22-04-2016 APECO1_RS15875 b0f66b06c4153c17dbc1889bb680b8da 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 3.2E-200 T 22-04-2016 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77|UniPathway: UPA00563 APECO1_RS15875 b0f66b06c4153c17dbc1889bb680b8da 382 PANTHER PTHR11496:SF77 1 382 5.5E-226 T 22-04-2016 APECO1_RS15875 b0f66b06c4153c17dbc1889bb680b8da 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 6.5E-118 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS15875 b0f66b06c4153c17dbc1889bb680b8da 382 Gene3D G3DSA:3.40.50.1970 4 185 9.1E-59 T 22-04-2016 APECO1_RS15875 b0f66b06c4153c17dbc1889bb680b8da 382 PANTHER PTHR11496 1 382 5.5E-226 T 22-04-2016 APECO1_RS15875 b0f66b06c4153c17dbc1889bb680b8da 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS15875 b0f66b06c4153c17dbc1889bb680b8da 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS04940 876dc3992dc25108fa8cc0e9b1bc8d16 219 PANTHER PTHR23291:SF37 2 219 4.3E-119 T 22-04-2016 APECO1_RS04940 876dc3992dc25108fa8cc0e9b1bc8d16 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 1.5E-42 T 22-04-2016 APECO1_RS04940 876dc3992dc25108fa8cc0e9b1bc8d16 219 PANTHER PTHR23291 2 219 4.3E-119 T 22-04-2016 IPR006214 Bax inhibitor 1-related APECO1_RS04940 876dc3992dc25108fa8cc0e9b1bc8d16 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 22-04-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 APECO1_RS17650 1a78793fdbf2ad46c261d9c79cf4431f 275 PANTHER PTHR12905:SF7 51 275 1.5E-128 T 22-04-2016 APECO1_RS17650 1a78793fdbf2ad46c261d9c79cf4431f 275 PANTHER PTHR12905:SF7 6 35 1.5E-128 T 22-04-2016 APECO1_RS17650 1a78793fdbf2ad46c261d9c79cf4431f 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 9.0E-27 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 APECO1_RS17650 1a78793fdbf2ad46c261d9c79cf4431f 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 43.006 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 APECO1_RS17650 1a78793fdbf2ad46c261d9c79cf4431f 275 PANTHER PTHR12905 51 275 1.5E-128 T 22-04-2016 APECO1_RS17650 1a78793fdbf2ad46c261d9c79cf4431f 275 Gene3D G3DSA:3.60.21.10 14 258 7.4E-42 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS17650 1a78793fdbf2ad46c261d9c79cf4431f 275 PANTHER PTHR12905 6 35 1.5E-128 T 22-04-2016 APECO1_RS17650 1a78793fdbf2ad46c261d9c79cf4431f 275 SUPERFAMILY SSF56300 16 269 1.26E-61 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS17650 1a78793fdbf2ad46c261d9c79cf4431f 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 4.6E-20 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS05000 ab52a56d701f4b8ec4f64047f13642de 70 SUPERFAMILY SSF50249 4 69 1.93E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS05000 ab52a56d701f4b8ec4f64047f13642de 70 Gene3D G3DSA:2.40.50.140 5 69 5.0E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS05000 ab52a56d701f4b8ec4f64047f13642de 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site APECO1_RS05000 ab52a56d701f4b8ec4f64047f13642de 70 PANTHER PTHR11544 1 67 5.6E-18 T 22-04-2016 APECO1_RS05000 ab52a56d701f4b8ec4f64047f13642de 70 SMART SM00357 6 70 5.3E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS05000 ab52a56d701f4b8ec4f64047f13642de 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.2E-22 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS05000 ab52a56d701f4b8ec4f64047f13642de 70 PIRSF PIRSF002599 1 70 5.7E-13 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APECO1_RS23275 2374060d187836f5e9233d74675a62e9 549 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 450 470 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS23275 2374060d187836f5e9233d74675a62e9 549 Pfam PF00474 Sodium:solute symporter family 63 468 4.4E-140 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS23275 2374060d187836f5e9233d74675a62e9 549 PANTHER PTHR11819 32 538 7.2E-297 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS23275 2374060d187836f5e9233d74675a62e9 549 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS23275 2374060d187836f5e9233d74675a62e9 549 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 549 60.575 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 APECO1_RS23275 2374060d187836f5e9233d74675a62e9 549 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 2 549 0.0 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 APECO1_RS23275 2374060d187836f5e9233d74675a62e9 549 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 466 8.8E-63 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS23275 2374060d187836f5e9233d74675a62e9 549 PANTHER PTHR11819:SF13 32 538 7.2E-297 T 22-04-2016 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 Gene3D G3DSA:1.10.150.20 165 237 5.7E-26 T 22-04-2016 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 346 5.4E-9 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 SUPERFAMILY SSF56672 1 234 3.11E-94 T 22-04-2016 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 Gene3D G3DSA:3.30.70.270 66 164 8.4E-37 T 22-04-2016 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.235 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 SUPERFAMILY SSF100879 241 349 6.28E-27 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 PANTHER PTHR11076 1 347 6.5E-228 T 22-04-2016 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 Gene3D G3DSA:3.30.1490.100 238 349 2.8E-44 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 PANTHER PTHR11076:SF32 1 347 6.5E-228 T 22-04-2016 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 Pfam PF00817 impB/mucB/samB family 7 154 2.8E-49 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS01320 ae53bbec6d8c6c3ebf7b6551112b6631 351 Pfam PF11798 IMS family HHH motif 166 197 5.7E-8 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22250 e2314bad0c0a98578931e0e57b651769 126 Pfam PF12889 Protein of unknown function (DUF3829) 1 105 7.9E-23 T 22-04-2016 IPR024291 Protein of unknown function DUF3829 APECO1_RS08810 2732d501db3bbd3355d58a6104b0f34d 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.2E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APECO1_RS08810 2732d501db3bbd3355d58a6104b0f34d 155 PANTHER PTHR35603 1 155 2.6E-53 T 22-04-2016 APECO1_RS08810 2732d501db3bbd3355d58a6104b0f34d 155 PANTHER PTHR35603:SF1 1 155 2.6E-53 T 22-04-2016 APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.6E-47 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 SUPERFAMILY SSF56059 123 312 4.86E-60 T 22-04-2016 APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 Gene3D G3DSA:3.30.1490.20 137 191 3.6E-32 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.0E-79 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 SUPERFAMILY SSF52440 2 122 1.64E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 Gene3D G3DSA:3.40.50.20 2 129 2.1E-56 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 183.183 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 PANTHER PTHR21621 1 316 9.9E-172 T 22-04-2016 APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 Gene3D G3DSA:3.30.470.20 192 297 6.8E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 2.4E-140 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APECO1_RS16700 1f2c9fc593dcdf3ce0bd48194898f520 316 PANTHER PTHR21621:SF4 1 316 9.9E-172 T 22-04-2016 APECO1_RS13800 585c743eab0b8111ad2ffa60405c76dc 191 Pfam PF00293 NUDIX domain 45 163 2.5E-9 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS13800 585c743eab0b8111ad2ffa60405c76dc 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 2 186 2.3E-80 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 APECO1_RS13800 585c743eab0b8111ad2ffa60405c76dc 191 SUPERFAMILY SSF55811 11 188 4.06E-50 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS13800 585c743eab0b8111ad2ffa60405c76dc 191 PANTHER PTHR11839 12 189 9.5E-44 T 22-04-2016 APECO1_RS13800 585c743eab0b8111ad2ffa60405c76dc 191 Gene3D G3DSA:3.90.79.10 4 186 1.1E-58 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 Gene3D G3DSA:3.30.160.20 153 223 8.7E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 Gene3D G3DSA:1.10.1520.10 6 148 2.3E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 SMART SM00535 21 149 9.5E-60 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.49 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 SUPERFAMILY SSF69065 5 159 1.69E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 PANTHER PTHR11207 4 225 3.5E-112 T 22-04-2016 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 Pfam PF14622 Ribonuclease-III-like 20 141 1.6E-33 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 9.9E-15 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 2.2E-74 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 SUPERFAMILY SSF54768 109 223 2.04E-27 T 22-04-2016 APECO1_RS14515 b81a8841be34ad90cf46589e02b5db5e 226 SMART SM00358 156 224 9.1E-24 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APECO1_RS22875 569efc101e9af3552ad4cfa14401802b 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.706 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APECO1_RS22875 569efc101e9af3552ad4cfa14401802b 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.2E-132 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APECO1_RS22875 569efc101e9af3552ad4cfa14401802b 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 3.3E-169 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APECO1_RS22875 569efc101e9af3552ad4cfa14401802b 309 SUPERFAMILY SSF52317 17 297 6.66E-101 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS22875 569efc101e9af3552ad4cfa14401802b 309 PIRSF PIRSF000450 1 308 9.8E-149 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APECO1_RS22875 569efc101e9af3552ad4cfa14401802b 309 PANTHER PTHR20919 2 309 2.1E-164 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APECO1_RS22875 569efc101e9af3552ad4cfa14401802b 309 PANTHER PTHR20919:SF0 2 309 2.1E-164 T 22-04-2016 APECO1_RS22875 569efc101e9af3552ad4cfa14401802b 309 Gene3D G3DSA:3.40.50.880 34 301 3.6E-123 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS22875 569efc101e9af3552ad4cfa14401802b 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 8.0E-150 T 22-04-2016 APECO1_RS15395 37514953988ae0bc0bd2512c5f3ce64a 123 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 9.5E-39 T 22-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS15395 37514953988ae0bc0bd2512c5f3ce64a 123 Gene3D G3DSA:2.40.33.40 1 119 1.6E-45 T 22-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS15395 37514953988ae0bc0bd2512c5f3ce64a 123 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 3.0E-61 T 22-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS15395 37514953988ae0bc0bd2512c5f3ce64a 123 SUPERFAMILY SSF141530 4 119 1.57E-37 T 22-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS15395 37514953988ae0bc0bd2512c5f3ce64a 123 TIGRFAM TIGR00849 gutA: PTS system, glucitol/sorbitol-specific IIA component 1 123 7.6E-60 T 22-04-2016 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS12685 ae0700384201c95c88810a02dd3a21f9 180 SUPERFAMILY SSF54862 33 153 5.44E-29 T 22-04-2016 APECO1_RS12685 ae0700384201c95c88810a02dd3a21f9 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 7.2E-52 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 APECO1_RS12685 ae0700384201c95c88810a02dd3a21f9 180 Gene3D G3DSA:3.30.70.20 27 117 1.0E-18 T 22-04-2016 APECO1_RS12685 ae0700384201c95c88810a02dd3a21f9 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 26.93 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 APECO1_RS12685 ae0700384201c95c88810a02dd3a21f9 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.3E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS12685 ae0700384201c95c88810a02dd3a21f9 180 PANTHER PTHR10849 8 180 1.3E-83 T 22-04-2016 APECO1_RS12685 ae0700384201c95c88810a02dd3a21f9 180 PANTHER PTHR10849:SF13 8 180 1.3E-83 T 22-04-2016 APECO1_RS12685 ae0700384201c95c88810a02dd3a21f9 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS12685 ae0700384201c95c88810a02dd3a21f9 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 Pfam PF00989 PAS fold 99 194 2.3E-10 T 22-04-2016 IPR013767 PAS fold GO:0006355 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 SMART SM00388 203 269 7.3E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 3.2E-28 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 1.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 SUPERFAMILY SSF47384 190 268 1.77E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 SMART SM00387 313 425 2.3E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 421 3.3E-139 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 Gene3D G3DSA:1.10.287.130 195 254 1.8E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 SMART SM00091 98 164 2.6E-5 T 22-04-2016 IPR000014 PAS domain APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 Gene3D G3DSA:3.30.565.10 255 422 4.5E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 2.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 Gene3D G3DSA:3.30.450.20 99 194 4.3E-9 T 22-04-2016 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 PANTHER PTHR24423 1 431 5.4E-197 T 22-04-2016 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 424 3.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 SUPERFAMILY SSF55874 259 423 8.51E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 PANTHER PTHR24423:SF554 1 431 5.4E-197 T 22-04-2016 APECO1_RS02035 a99cf7df9d7c684bcb4e84d3fb7354d4 431 SUPERFAMILY SSF55785 87 195 6.98E-10 T 22-04-2016 IPR000014 PAS domain APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 PANTHER PTHR21248 365 459 4.0E-244 T 22-04-2016 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 PANTHER PTHR21248 2 348 4.0E-244 T 22-04-2016 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 Pfam PF13091 PLD-like domain 275 417 1.1E-27 T 22-04-2016 IPR025202 Phospholipase D-like domain APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 Pfam PF13091 PLD-like domain 39 184 1.4E-14 T 22-04-2016 IPR025202 Phospholipase D-like domain APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 PANTHER PTHR21248:SF12 365 459 4.0E-244 T 22-04-2016 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 PANTHER PTHR21248:SF12 2 348 4.0E-244 T 22-04-2016 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 Gene3D G3DSA:3.30.870.10 5 186 5.3E-45 T 22-04-2016 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 Gene3D G3DSA:3.30.870.10 193 438 1.5E-61 T 22-04-2016 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 Hamap MF_01918 Cardiolipin synthase C [clsC]. 40 473 74.156 T 22-04-2016 IPR030871 Cardiolipin synthase C GO:0032049|GO:0090483 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 SUPERFAMILY SSF56024 17 192 3.14E-39 T 22-04-2016 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 SMART SM00155 364 391 3.4E-7 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 SMART SM00155 125 152 0.013 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APECO1_RS05270 12ff638d93b737fcbb8b77ba5675eaca 473 SUPERFAMILY SSF56024 206 437 1.79E-36 T 22-04-2016 APECO1_RS11095 a2e05cfa48b0c122fe2ec30e9819b0c7 290 PANTHER PTHR11649 8 289 6.0E-26 T 22-04-2016 APECO1_RS11095 a2e05cfa48b0c122fe2ec30e9819b0c7 290 SUPERFAMILY SSF52540 21 234 2.56E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11095 a2e05cfa48b0c122fe2ec30e9819b0c7 290 Gene3D G3DSA:3.40.50.300 38 218 7.7E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11095 a2e05cfa48b0c122fe2ec30e9819b0c7 290 Pfam PF01926 50S ribosome-binding GTPase 40 132 3.8E-13 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS14360 09f9c8a98471672eae8a4f00a1503757 246 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 241 3.2E-97 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APECO1_RS14360 09f9c8a98471672eae8a4f00a1503757 246 Gene3D G3DSA:3.40.1280.10 4 172 1.7E-33 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APECO1_RS14360 09f9c8a98471672eae8a4f00a1503757 246 PIRSF PIRSF004808 1 245 8.0E-81 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APECO1_RS14360 09f9c8a98471672eae8a4f00a1503757 246 PANTHER PTHR12029 3 179 1.7E-49 T 22-04-2016 APECO1_RS14360 09f9c8a98471672eae8a4f00a1503757 246 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.2E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APECO1_RS14360 09f9c8a98471672eae8a4f00a1503757 246 SUPERFAMILY SSF75217 4 164 8.5E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APECO1_RS24560 8c45f185b615ccfdadcba458da6cd960 176 Gene3D G3DSA:3.90.80.10 5 175 2.0E-62 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APECO1_RS24560 8c45f185b615ccfdadcba458da6cd960 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.9E-55 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APECO1_RS24560 8c45f185b615ccfdadcba458da6cd960 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APECO1_RS24560 8c45f185b615ccfdadcba458da6cd960 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.626 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APECO1_RS24560 8c45f185b615ccfdadcba458da6cd960 176 PANTHER PTHR10286 5 175 2.5E-80 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APECO1_RS24560 8c45f185b615ccfdadcba458da6cd960 176 SUPERFAMILY SSF50324 4 174 6.02E-68 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 297 1.8E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PANTHER PTHR22912 1 440 9.7E-248 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 434 4.6E-29 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PANTHER PTHR22912:SF145 1 440 9.7E-248 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 120 138 1.0E-27 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 1.0E-27 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 1.0E-27 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 1.0E-27 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.0E-27 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 Gene3D G3DSA:3.50.50.60 2 127 4.8E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 SUPERFAMILY SSF51905 1 297 3.06E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 Gene3D G3DSA:3.30.390.30 318 437 7.9E-36 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.1E-49 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 324 345 5.1E-49 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 132 5.1E-49 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 5.1E-49 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 5.1E-49 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 5.1E-49 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 404 5.1E-49 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 431 5.1E-49 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.1E-49 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 PIRSF PIRSF000350 1 438 7.6E-94 T 22-04-2016 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 SUPERFAMILY SSF55424 324 437 1.89E-33 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APECO1_RS01605 63cc2da40a2fca33660d8eb6708b31cb 441 Gene3D G3DSA:3.50.50.60 128 316 6.6E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS01720 da086688fb3e9d2be98e7b7c0978f99b 472 Pfam PF06545 Protein of unknown function (DUF1116) 143 357 4.9E-89 T 22-04-2016 IPR009499 Protein of unknown function DUF1116 APECO1_RS01720 da086688fb3e9d2be98e7b7c0978f99b 472 Gene3D G3DSA:1.10.10.660 95 155 4.6E-36 T 22-04-2016 IPR024033 Uncharacterised domain, YlbE APECO1_RS01720 da086688fb3e9d2be98e7b7c0978f99b 472 Gene3D G3DSA:3.90.1700.10 305 470 1.8E-77 T 22-04-2016 APECO1_RS01720 da086688fb3e9d2be98e7b7c0978f99b 472 Gene3D G3DSA:3.90.1710.10 156 303 9.3E-73 T 22-04-2016 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 Gene3D G3DSA:1.10.10.10 268 349 5.5E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 PANTHER PTHR10815 157 348 7.4E-129 T 22-04-2016 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 Gene3D G3DSA:3.40.10.10 4 86 6.7E-36 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 SUPERFAMILY SSF46689 85 133 1.34E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 SMART SM00342 99 181 1.2E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 Pfam PF02805 Metal binding domain of Ada 11 75 8.0E-32 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 Gene3D G3DSA:1.10.10.60 87 139 3.4E-25 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 Pfam PF12833 Helix-turn-helix domain 105 181 4.1E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 PIRSF PIRSF000409 1 354 7.7E-144 T 22-04-2016 IPR016221 Bifunctional regulatory protein Ada APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 348 5.3E-32 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 189 266 4.1E-20 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 1.0E-37 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 SUPERFAMILY SSF53155 187 267 3.34E-20 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 SUPERFAMILY SSF57884 1 92 2.75E-34 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 Gene3D G3DSA:3.30.160.70 175 267 1.9E-33 T 22-04-2016 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 SUPERFAMILY SSF46767 268 348 1.57E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 136 177 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 86 128 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS12355 50adb5421d6a6f4f530d952779e1bac3 354 PANTHER PTHR10815:SF9 157 348 7.4E-129 T 22-04-2016 APECO1_RS15660 d886f9c11baa1cf5170150ec3dff3f07 345 SUPERFAMILY SSF53187 42 316 8.86E-38 T 22-04-2016 APECO1_RS15660 d886f9c11baa1cf5170150ec3dff3f07 345 Pfam PF04389 Peptidase family M28 100 330 1.4E-34 T 22-04-2016 IPR007484 Peptidase M28 APECO1_RS15660 d886f9c11baa1cf5170150ec3dff3f07 345 Gene3D G3DSA:3.40.630.10 37 344 6.0E-47 T 22-04-2016 APECO1_RS15660 d886f9c11baa1cf5170150ec3dff3f07 345 PANTHER PTHR12147 19 282 7.1E-51 T 22-04-2016 APECO1_RS15660 d886f9c11baa1cf5170150ec3dff3f07 345 PANTHER PTHR12147 301 345 7.1E-51 T 22-04-2016 APECO1_RS04485 c4736d12e58cb56257359d69540f8e1d 357 Pfam PF05125 Phage major capsid protein, P2 family 8 340 1.8E-146 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 APECO1_RS04485 c4736d12e58cb56257359d69540f8e1d 357 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 342 1.3E-94 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 APECO1_RS22150 d7c7c6ef96ed5a17fa42ca8771f17662 477 Pfam PF00083 Sugar (and other) transporter 72 453 1.3E-29 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS22150 d7c7c6ef96ed5a17fa42ca8771f17662 477 PANTHER PTHR24064 13 471 4.9E-40 T 22-04-2016 APECO1_RS22150 d7c7c6ef96ed5a17fa42ca8771f17662 477 Gene3D G3DSA:1.20.1250.20 274 459 3.4E-11 T 22-04-2016 APECO1_RS22150 d7c7c6ef96ed5a17fa42ca8771f17662 477 Gene3D G3DSA:1.20.1250.20 34 215 1.5E-21 T 22-04-2016 APECO1_RS22150 d7c7c6ef96ed5a17fa42ca8771f17662 477 SUPERFAMILY SSF103473 30 464 3.01E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS22150 d7c7c6ef96ed5a17fa42ca8771f17662 477 PANTHER PTHR24064:SF168 13 471 4.9E-40 T 22-04-2016 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 PANTHER PTHR10986 2 117 4.2E-68 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.3E-53 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 Pfam PF00453 Ribosomal protein L20 3 109 3.9E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 Gene3D G3DSA:1.10.1900.20 55 117 3.7E-31 T 22-04-2016 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 SUPERFAMILY SSF74731 3 117 2.62E-50 T 22-04-2016 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 PANTHER PTHR10986:SF12 2 117 4.2E-68 T 22-04-2016 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APECO1_RS09210 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 22-04-2016 APECO1_RS09910 b314da7703a0f4533abc0e706147208f 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APECO1_RS09910 b314da7703a0f4533abc0e706147208f 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 APECO1_RS09910 b314da7703a0f4533abc0e706147208f 213 SUPERFAMILY SSF51569 3 209 5.49E-69 T 22-04-2016 APECO1_RS09910 b314da7703a0f4533abc0e706147208f 213 Gene3D G3DSA:3.20.20.70 2 210 2.9E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS09910 b314da7703a0f4533abc0e706147208f 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 3.0E-87 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APECO1_RS09910 b314da7703a0f4533abc0e706147208f 213 PANTHER PTHR30246:SF0 1 212 8.3E-134 T 22-04-2016 APECO1_RS09910 b314da7703a0f4533abc0e706147208f 213 Pfam PF01081 KDPG and KHG aldolase 9 203 2.0E-94 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APECO1_RS09910 b314da7703a0f4533abc0e706147208f 213 PANTHER PTHR30246 1 212 8.3E-134 T 22-04-2016 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 SUPERFAMILY SSF48208 39 539 6.05E-175 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 PANTHER PTHR23403:SF13 12 564 0.0 T 22-04-2016 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 ProSitePatterns PS00928 Trehalase signature 2. 446 455 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 Pfam PF01204 Trehalase 55 532 8.3E-177 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 PANTHER PTHR23403 12 564 0.0 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 ProSitePatterns PS00927 Trehalase signature 1. 149 162 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 266 283 4.6E-50 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 191 209 4.6E-50 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 516 529 4.6E-50 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 332 349 4.6E-50 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 375 391 4.6E-50 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 439 455 4.6E-50 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 PRINTS PR00744 Glycosyl hydrolase family 37 signature 300 317 4.6E-50 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS06345 85f3a00fbc76ad1df2bafe5fb939ce40 565 Hamap MF_01060 Periplasmic trehalase [treA]. 1 534 82.403 T 22-04-2016 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 Pfam PF00905 Penicillin binding protein transpeptidase domain 330 519 5.6E-11 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 SUPERFAMILY SSF56601 208 638 2.5E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 Pfam PF00912 Transglycosylase 61 226 3.1E-51 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 PANTHER PTHR32282:SF0 1 675 2.8E-243 T 22-04-2016 APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 Gene3D G3DSA:1.10.3810.10 59 229 3.6E-54 T 22-04-2016 APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 37 770 4.5E-276 T 22-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 686 767 3.7E-17 T 22-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 Gene3D G3DSA:3.40.710.10 230 616 6.8E-73 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 PANTHER PTHR32282 1 675 2.8E-243 T 22-04-2016 APECO1_RS14295 4d3c71b808e9456b36c13d488966feaa 770 SUPERFAMILY SSF53955 39 258 1.69E-65 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS16360 28eb48998fba98b3941a596473774954 956 PANTHER PTHR11908 47 317 0.0 T 22-04-2016 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 PANTHER PTHR11908 356 766 0.0 T 22-04-2016 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 PANTHER PTHR11908 782 955 0.0 T 22-04-2016 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Gene3D G3DSA:1.10.150.120 73 175 8.0E-17 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 TIGRFAM TIGR03313 Se_sel_red_Mo: probable selenate reductase, molybdenum-binding subunit 5 955 0.0 T 22-04-2016 IPR017699 Molybdenum-binding protein YgfN/XdhD KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Gene3D G3DSA:3.90.1170.50 176 297 2.6E-35 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 355 893 1.4E-148 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 SUPERFAMILY SSF54665 164 317 4.97E-45 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Pfam PF01799 [2Fe-2S] binding domain 73 144 9.3E-9 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 SMART SM01008 186 298 1.8E-35 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 187 297 2.8E-30 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Gene3D G3DSA:3.30.365.10 653 810 3.1E-43 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Gene3D G3DSA:3.30.365.10 559 652 2.5E-55 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Gene3D G3DSA:3.30.365.10 811 955 2.5E-55 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 PANTHER PTHR11908:SF96 47 317 0.0 T 22-04-2016 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 PANTHER PTHR11908:SF96 356 766 0.0 T 22-04-2016 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 PANTHER PTHR11908:SF96 782 955 0.0 T 22-04-2016 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 SUPERFAMILY SSF47741 84 188 3.93E-17 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Gene3D G3DSA:3.30.365.10 483 558 1.2E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Gene3D G3DSA:3.30.365.10 299 317 1.2E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Gene3D G3DSA:3.30.365.10 353 377 1.2E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 SUPERFAMILY SSF56003 302 318 1.06E-166 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 SUPERFAMILY SSF56003 354 955 1.06E-166 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS16360 28eb48998fba98b3941a596473774954 956 Gene3D G3DSA:3.30.365.10 378 480 1.3E-36 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 Pfam PF00005 ABC transporter 25 174 4.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 Pfam PF00005 ABC transporter 279 430 2.5E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 PANTHER PTHR24220 11 385 1.2E-267 T 22-04-2016 APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 PANTHER PTHR24220:SF440 11 385 1.2E-267 T 22-04-2016 APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 SMART SM00382 34 222 2.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 SMART SM00382 285 479 0.38 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 SUPERFAMILY SSF52540 9 232 8.32E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 Gene3D G3DSA:3.40.50.300 7 235 3.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 Gene3D G3DSA:3.40.50.300 268 490 1.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 SUPERFAMILY SSF52540 268 489 3.97E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24570 9578cf9a94304a9e5d8db61c4197ad0f 500 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 Gene3D G3DSA:3.40.50.1000 83 216 3.3E-36 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 7.8E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 7.8E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 7.8E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 PANTHER PTHR18901 1 215 2.9E-74 T 22-04-2016 APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 PANTHER PTHR18901:SF34 1 215 2.9E-74 T 22-04-2016 APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 191 1.8E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 SUPERFAMILY SSF56784 7 216 5.91E-48 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 Gene3D G3DSA:1.10.150.240 20 82 2.8E-37 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APECO1_RS09265 9338ac052010db158081cc5ce447e6ce 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 3.8E-22 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS18135 2c25f8c3f69a93988153ec5f5be1b7ce 144 Pfam PF03610 PTS system fructose IIA component 4 113 2.0E-27 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS18135 2c25f8c3f69a93988153ec5f5be1b7ce 144 PANTHER PTHR33799:SF1 2 131 3.1E-37 T 22-04-2016 APECO1_RS18135 2c25f8c3f69a93988153ec5f5be1b7ce 144 SUPERFAMILY SSF53062 1 126 1.44E-34 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS18135 2c25f8c3f69a93988153ec5f5be1b7ce 144 PANTHER PTHR33799 2 131 3.1E-37 T 22-04-2016 APECO1_RS18135 2c25f8c3f69a93988153ec5f5be1b7ce 144 Gene3D G3DSA:3.40.50.510 1 135 4.6E-39 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS00220 bdee53716cc1fe1149a3a4336d81dbdd 405 Gene3D G3DSA:3.40.50.10540 311 401 2.2E-76 T 22-04-2016 IPR023606 CoA-transferase family III domain APECO1_RS00220 bdee53716cc1fe1149a3a4336d81dbdd 405 Gene3D G3DSA:3.40.50.10540 9 216 2.2E-76 T 22-04-2016 IPR023606 CoA-transferase family III domain APECO1_RS00220 bdee53716cc1fe1149a3a4336d81dbdd 405 PANTHER PTHR24023:SF593 15 207 6.8E-12 T 22-04-2016 APECO1_RS00220 bdee53716cc1fe1149a3a4336d81dbdd 405 PANTHER PTHR24023 15 207 6.8E-12 T 22-04-2016 APECO1_RS00220 bdee53716cc1fe1149a3a4336d81dbdd 405 Gene3D G3DSA:3.30.1540.10 227 310 1.9E-5 T 22-04-2016 APECO1_RS00220 bdee53716cc1fe1149a3a4336d81dbdd 405 Pfam PF02515 CoA-transferase family III 12 378 6.6E-95 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 APECO1_RS00220 bdee53716cc1fe1149a3a4336d81dbdd 405 SUPERFAMILY SSF89796 5 401 5.1E-100 T 22-04-2016 IPR023606 CoA-transferase family III domain APECO1_RS00220 bdee53716cc1fe1149a3a4336d81dbdd 405 Hamap MF_01050 L-carnitine CoA-transferase [caiB]. 1 405 99.994 T 22-04-2016 IPR023452 L-carnitine CoA-transferase CaiB GO:0009437|GO:0016782 UniPathway: UPA00117 APECO1_RS19430 be2e0a244d7e516403a8f9d33e80ba20 259 SUPERFAMILY SSF53067 34 164 2.59E-5 T 22-04-2016 APECO1_RS01355 84b4aa49c6cc2ec10ca1215add15a8e0 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.194 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 APECO1_RS01355 84b4aa49c6cc2ec10ca1215add15a8e0 152 Pfam PF00156 Phosphoribosyl transferase domain 11 144 1.4E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APECO1_RS01355 84b4aa49c6cc2ec10ca1215add15a8e0 152 PANTHER PTHR39563 2 152 1.2E-116 T 22-04-2016 APECO1_RS01355 84b4aa49c6cc2ec10ca1215add15a8e0 152 SUPERFAMILY SSF53271 4 144 8.39E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS01355 84b4aa49c6cc2ec10ca1215add15a8e0 152 Gene3D G3DSA:3.40.50.2020 1 145 1.7E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS22050 6d88cda8a30fa8d758cadda77195f0bf 328 Pfam PF01636 Phosphotransferase enzyme family 32 259 2.9E-43 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase APECO1_RS22050 6d88cda8a30fa8d758cadda77195f0bf 328 PANTHER PTHR39573 2 328 2.5E-197 T 22-04-2016 APECO1_RS22050 6d88cda8a30fa8d758cadda77195f0bf 328 PANTHER PTHR39573:SF1 2 328 2.5E-197 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 APECO1_RS22050 6d88cda8a30fa8d758cadda77195f0bf 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.856 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 APECO1_RS22050 6d88cda8a30fa8d758cadda77195f0bf 328 Gene3D G3DSA:3.90.1200.10 106 325 1.9E-46 T 22-04-2016 APECO1_RS22050 6d88cda8a30fa8d758cadda77195f0bf 328 SUPERFAMILY SSF56112 6 327 1.01E-91 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS13920 313e3944fc2a0adf6530841e4fbd8fe0 212 Gene3D G3DSA:3.40.50.170 1 199 1.8E-71 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS13920 313e3944fc2a0adf6530841e4fbd8fe0 212 SUPERFAMILY SSF53328 1 205 8.24E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS13920 313e3944fc2a0adf6530841e4fbd8fe0 212 Pfam PF00551 Formyl transferase 1 181 3.5E-68 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS13920 313e3944fc2a0adf6530841e4fbd8fe0 212 PANTHER PTHR10520 1 193 3.3E-107 T 22-04-2016 APECO1_RS13920 313e3944fc2a0adf6530841e4fbd8fe0 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 191 6.5E-85 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APECO1_RS13920 313e3944fc2a0adf6530841e4fbd8fe0 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 187 31.843 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APECO1_RS13920 313e3944fc2a0adf6530841e4fbd8fe0 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS12295 e7e732f195c2b45b50d9be60c9a66db8 200 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 11 194 5.7E-106 T 22-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 APECO1_RS12295 e7e732f195c2b45b50d9be60c9a66db8 200 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 22 193 2.0E-77 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal APECO1_RS12295 e7e732f195c2b45b50d9be60c9a66db8 200 Gene3D G3DSA:1.10.3820.10 21 193 5.2E-28 T 22-04-2016 APECO1_RS12295 e7e732f195c2b45b50d9be60c9a66db8 200 PIRSF PIRSF000013 1 200 4.7E-108 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 APECO1_RS12295 e7e732f195c2b45b50d9be60c9a66db8 200 PANTHER PTHR30333:SF1 2 200 9.2E-119 T 22-04-2016 APECO1_RS12295 e7e732f195c2b45b50d9be60c9a66db8 200 PANTHER PTHR30333 2 200 9.2E-119 T 22-04-2016 APECO1_RS12295 e7e732f195c2b45b50d9be60c9a66db8 200 SUPERFAMILY SSF48695 17 196 1.09E-64 T 22-04-2016 IPR011031 Multihaem cytochrome APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 4 338 38.067 T 22-04-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 Gene3D G3DSA:3.30.360.20 185 273 1.4E-37 T 22-04-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 PANTHER PTHR11096:SF0 2 331 1.3E-107 T 22-04-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 5 324 1.4E-120 T 22-04-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 PIRSF PIRSF005378 1 338 6.7E-115 T 22-04-2016 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 SUPERFAMILY SSF55205 4 183 1.44E-64 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 SUPERFAMILY SSF55205 277 336 3.2E-9 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 Gene3D G3DSA:3.65.10.20 274 333 3.5E-88 T 22-04-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 Gene3D G3DSA:3.65.10.20 4 177 3.5E-88 T 22-04-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 SUPERFAMILY SSF52913 184 278 2.09E-22 T 22-04-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 Pfam PF01137 RNA 3'-terminal phosphate cyclase 12 324 2.3E-78 T 22-04-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 ProSitePatterns PS01287 RNA 3'-terminal phosphate cyclase signature. 157 167 - T 22-04-2016 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 PANTHER PTHR11096 2 331 1.3E-107 T 22-04-2016 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 APECO1_RS19555 a48dff524e4f8e84d84a75417391443a 338 Pfam PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain 184 273 3.3E-9 T 22-04-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.40.50.740 504 687 3.2E-36 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.40.50.740 278 340 3.2E-36 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF53706 219 688 4.71E-84 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 8.3E-15 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF54862 81 213 2.93E-34 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 SMART SM00926 221 275 7.0E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 9.4E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF01568 Molydopterin dinucleotide binding domain 828 890 1.0E-6 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 PANTHER PTHR11615 494 680 0.0 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 PANTHER PTHR11615 739 905 0.0 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 PANTHER PTHR11615 364 430 0.0 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 PANTHER PTHR11615 3 320 0.0 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:2.40.40.20 816 890 2.8E-12 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 PANTHER PTHR11615:SF134 494 680 0.0 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 PANTHER PTHR11615:SF134 739 905 0.0 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 PANTHER PTHR11615:SF134 364 430 0.0 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 PANTHER PTHR11615:SF134 3 320 0.0 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF50692 814 891 1.06E-13 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.4E-11 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.30.70.20 147 157 1.9E-4 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.30.70.20 198 226 1.9E-4 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 1.0E-205 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:3.10.20.30 3 84 9.3E-8 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 SUPERFAMILY SSF54292 1 77 1.09E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Pfam PF00384 Molybdopterin oxidoreductase 562 638 8.6E-8 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 Gene3D G3DSA:2.20.25.90 227 274 2.6E-14 T 22-04-2016 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 SMART SM00929 88 128 1.9E-19 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APECO1_RS12695 9605ed4c3cda8f087c1c3ba083eb409c 908 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APECO1_RS15925 bf4b447bd2f3097b62a413fb7083ab2e 75 PANTHER PTHR37011:SF2 1 75 1.1E-43 T 22-04-2016 APECO1_RS15925 bf4b447bd2f3097b62a413fb7083ab2e 75 PANTHER PTHR37011 1 75 1.1E-43 T 22-04-2016 APECO1_RS15925 bf4b447bd2f3097b62a413fb7083ab2e 75 Gene3D G3DSA:2.30.30.100 20 75 6.8E-34 T 22-04-2016 APECO1_RS15925 bf4b447bd2f3097b62a413fb7083ab2e 75 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 2.0E-25 T 22-04-2016 IPR010305 Protein of unknown function DUF903 APECO1_RS15925 bf4b447bd2f3097b62a413fb7083ab2e 75 SUPERFAMILY SSF50182 23 73 4.85E-20 T 22-04-2016 IPR010920 LSM domain APECO1_RS05895 6c633c8af9279c2fdb494e6f7dd9d74f 113 Pfam PF10765 Protein of unknown function (DUF2591) 2 108 2.2E-17 T 22-04-2016 IPR019701 Bacteriophage P22, NinX APECO1_RS12175 ca378b7f66bed154a8d0d51b494fd345 364 Gene3D G3DSA:1.10.3720.10 131 351 3.9E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12175 ca378b7f66bed154a8d0d51b494fd345 364 SUPERFAMILY SSF161098 131 345 1.7E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12175 ca378b7f66bed154a8d0d51b494fd345 364 PANTHER PTHR30465:SF66 70 361 5.1E-228 T 22-04-2016 APECO1_RS12175 ca378b7f66bed154a8d0d51b494fd345 364 PANTHER PTHR30465:SF66 1 45 5.1E-228 T 22-04-2016 APECO1_RS12175 ca378b7f66bed154a8d0d51b494fd345 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 4.7E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12175 ca378b7f66bed154a8d0d51b494fd345 364 PANTHER PTHR30465 70 361 5.1E-228 T 22-04-2016 APECO1_RS12175 ca378b7f66bed154a8d0d51b494fd345 364 PANTHER PTHR30465 1 45 5.1E-228 T 22-04-2016 APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 SUPERFAMILY SSF53850 89 269 1.65E-14 T 22-04-2016 APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 PANTHER PTHR30579 1 272 1.2E-99 T 22-04-2016 APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 Pfam PF03466 LysR substrate binding domain 87 270 1.5E-12 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 PANTHER PTHR30579:SF0 1 272 1.2E-99 T 22-04-2016 APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 SUPERFAMILY SSF46785 2 85 1.67E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 Gene3D G3DSA:1.10.10.10 2 82 1.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 Gene3D G3DSA:3.40.190.10 211 222 6.2E-7 T 22-04-2016 APECO1_RS21450 a26df80015bb666c807c02db5689325b 279 Gene3D G3DSA:3.40.190.10 89 177 6.2E-7 T 22-04-2016 APECO1_RS13655 d05b0e789156c1b2f1057fc4c89f9952 298 SUPERFAMILY SSF53697 6 249 5.12E-66 T 22-04-2016 APECO1_RS13655 d05b0e789156c1b2f1057fc4c89f9952 298 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 296 1.3E-154 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APECO1_RS13655 d05b0e789156c1b2f1057fc4c89f9952 298 Pfam PF01380 SIS domain 128 208 3.1E-9 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS13655 d05b0e789156c1b2f1057fc4c89f9952 298 PANTHER PTHR10088 1 296 4.8E-149 T 22-04-2016 APECO1_RS13655 d05b0e789156c1b2f1057fc4c89f9952 298 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 42.35 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APECO1_RS13655 d05b0e789156c1b2f1057fc4c89f9952 298 Gene3D G3DSA:3.40.50.10490 4 249 9.7E-84 T 22-04-2016 APECO1_RS13655 d05b0e789156c1b2f1057fc4c89f9952 298 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APECO1_RS16405 c3447029777d6884bc05c36f065493d1 182 Pfam PF00293 NUDIX domain 31 161 5.2E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS16405 c3447029777d6884bc05c36f065493d1 182 Gene3D G3DSA:3.90.79.10 1 166 1.5E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS16405 c3447029777d6884bc05c36f065493d1 182 PIRSF PIRSF018427 1 181 2.3E-57 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APECO1_RS16405 c3447029777d6884bc05c36f065493d1 182 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 177 34.012 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APECO1_RS16405 c3447029777d6884bc05c36f065493d1 182 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 165 5.3E-46 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APECO1_RS16405 c3447029777d6884bc05c36f065493d1 182 PANTHER PTHR10885 1 168 1.1E-61 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APECO1_RS16405 c3447029777d6884bc05c36f065493d1 182 SUPERFAMILY SSF55811 4 166 1.02E-50 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS10845 de9c8b46183277a7b67c6925424ed009 319 PANTHER PTHR11019:SF61 10 319 3.7E-109 T 22-04-2016 APECO1_RS10845 de9c8b46183277a7b67c6925424ed009 319 Pfam PF12833 Helix-turn-helix domain 239 317 1.1E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS10845 de9c8b46183277a7b67c6925424ed009 319 PANTHER PTHR11019 10 319 3.7E-109 T 22-04-2016 APECO1_RS10845 de9c8b46183277a7b67c6925424ed009 319 SUPERFAMILY SSF46689 270 318 8.96E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS10845 de9c8b46183277a7b67c6925424ed009 319 SMART SM00342 233 316 2.3E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS10845 de9c8b46183277a7b67c6925424ed009 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS10845 de9c8b46183277a7b67c6925424ed009 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS10845 de9c8b46183277a7b67c6925424ed009 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS10845 de9c8b46183277a7b67c6925424ed009 319 Gene3D G3DSA:1.10.10.60 270 317 3.7E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS09050 64c850bb918a31acbefa8a5c44437e7f 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 48.703 T 22-04-2016 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS09050 64c850bb918a31acbefa8a5c44437e7f 136 PANTHER PTHR12418 2 136 8.6E-53 T 22-04-2016 APECO1_RS09050 64c850bb918a31acbefa8a5c44437e7f 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 2.2E-47 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain APECO1_RS09050 64c850bb918a31acbefa8a5c44437e7f 136 SUPERFAMILY SSF54637 1 133 1.94E-29 T 22-04-2016 IPR029069 HotDog domain APECO1_RS09050 64c850bb918a31acbefa8a5c44437e7f 136 PANTHER PTHR12418:SF33 2 136 8.6E-53 T 22-04-2016 APECO1_RS09050 64c850bb918a31acbefa8a5c44437e7f 136 Pfam PF03061 Thioesterase superfamily 50 127 9.6E-17 T 22-04-2016 IPR006683 Thioesterase domain APECO1_RS09050 64c850bb918a31acbefa8a5c44437e7f 136 Gene3D G3DSA:3.10.129.10 1 136 8.9E-52 T 22-04-2016 IPR029069 HotDog domain APECO1_RS02070 71affcd52404a53dba2f3b6f1bfef285 110 Pfam PF02699 Preprotein translocase subunit 22 99 2.4E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC APECO1_RS02070 71affcd52404a53dba2f3b6f1bfef285 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 102 3.0E-35 T 22-04-2016 IPR003849 Preprotein translocase YajC APECO1_RS02070 71affcd52404a53dba2f3b6f1bfef285 110 PANTHER PTHR33909 1 108 2.6E-37 T 22-04-2016 APECO1_RS02070 71affcd52404a53dba2f3b6f1bfef285 110 SMART SM01323 19 102 4.0E-37 T 22-04-2016 IPR003849 Preprotein translocase YajC APECO1_RS02070 71affcd52404a53dba2f3b6f1bfef285 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 3.1E-17 T 22-04-2016 IPR003849 Preprotein translocase YajC APECO1_RS02070 71affcd52404a53dba2f3b6f1bfef285 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 3.1E-17 T 22-04-2016 IPR003849 Preprotein translocase YajC APECO1_RS02070 71affcd52404a53dba2f3b6f1bfef285 110 PANTHER PTHR33909:SF1 1 108 2.6E-37 T 22-04-2016 APECO1_RS18745 55e624d7f58d49acadac94699f7bd377 80 PANTHER PTHR39174:SF1 2 80 1.5E-39 T 22-04-2016 APECO1_RS18745 55e624d7f58d49acadac94699f7bd377 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 80 3.0E-27 T 22-04-2016 IPR010398 Protein of unknown function DUF997 APECO1_RS18745 55e624d7f58d49acadac94699f7bd377 80 PANTHER PTHR39174 2 80 1.5E-39 T 22-04-2016 APECO1_RS18745 55e624d7f58d49acadac94699f7bd377 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 2.4E-31 T 22-04-2016 IPR010398 Protein of unknown function DUF997 APECO1_RS03455 bba175207e5faa8b4cbbdadbcb7abd88 124 Pfam PF00419 Fimbrial protein 1 123 7.0E-6 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS03455 bba175207e5faa8b4cbbdadbcb7abd88 124 SUPERFAMILY SSF49401 2 124 2.09E-7 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS03455 bba175207e5faa8b4cbbdadbcb7abd88 124 Gene3D G3DSA:2.60.40.1090 2 124 2.2E-6 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS05140 c93d5177da3d1e5e4a438d9fbb77e8e8 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 4.3E-133 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS05140 c93d5177da3d1e5e4a438d9fbb77e8e8 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 6.1E-234 T 22-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 APECO1_RS05140 c93d5177da3d1e5e4a438d9fbb77e8e8 502 Pfam PF00474 Sodium:solute symporter family 35 437 1.4E-147 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS05140 c93d5177da3d1e5e4a438d9fbb77e8e8 502 PANTHER PTHR11819:SF148 4 490 2.9E-190 T 22-04-2016 APECO1_RS05140 c93d5177da3d1e5e4a438d9fbb77e8e8 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS05140 c93d5177da3d1e5e4a438d9fbb77e8e8 502 PANTHER PTHR11819 4 490 2.9E-190 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS05140 c93d5177da3d1e5e4a438d9fbb77e8e8 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 PANTHER PTHR30524:SF0 1 382 4.6E-219 T 22-04-2016 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.8E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 9.8E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 9.8E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 9.8E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 373 3.4E-69 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 SUPERFAMILY SSF51735 1 203 7.59E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 PANTHER PTHR30524 1 382 4.6E-219 T 22-04-2016 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 42.138 T 22-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 SUPERFAMILY SSF48179 204 381 1.16E-46 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 4.8E-27 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 Gene3D G3DSA:1.10.1040.10 203 381 1.4E-50 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS20595 df748c1e036cf870050e6977379124b7 382 Gene3D G3DSA:3.40.50.720 2 202 2.0E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00475 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00475 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00475 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00475 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.847 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00475 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 6.4E-163 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00475 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 PANTHER PTHR22926:SF5 2 360 2.2E-195 T 22-04-2016 APECO1_RS00475 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 PANTHER PTHR22926 2 360 2.2E-195 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00475 9fc6a2249ccf26d2a5dd645ebb3f5e85 360 Pfam PF00953 Glycosyl transferase family 4 99 284 9.0E-34 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS16160 008e624cc3b1551dbd72679207093734 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.8E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS16160 008e624cc3b1551dbd72679207093734 187 Pfam PF13633 Prokaryotic N-terminal methylation site 5 30 1.8E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS16160 008e624cc3b1551dbd72679207093734 187 PIRSF PIRSF004525 1 187 4.9E-65 T 22-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted APECO1_RS16160 008e624cc3b1551dbd72679207093734 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS00370 5c62d8fc8171c9e75aee15e53359807d 232 SMART SM00382 24 209 6.2E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS00370 5c62d8fc8171c9e75aee15e53359807d 232 SUPERFAMILY SSF52540 1 222 1.09E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00370 5c62d8fc8171c9e75aee15e53359807d 232 PANTHER PTHR24220 1 219 3.5E-108 T 22-04-2016 APECO1_RS00370 5c62d8fc8171c9e75aee15e53359807d 232 PANTHER PTHR24220:SF439 1 219 3.5E-108 T 22-04-2016 APECO1_RS00370 5c62d8fc8171c9e75aee15e53359807d 232 Gene3D G3DSA:3.40.50.300 17 224 9.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00370 5c62d8fc8171c9e75aee15e53359807d 232 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS00370 5c62d8fc8171c9e75aee15e53359807d 232 Pfam PF00005 ABC transporter 18 157 8.9E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS00370 5c62d8fc8171c9e75aee15e53359807d 232 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 5.6E-119 T 22-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 SMART SM00922 114 209 1.2E-11 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 Pfam PF13378 Enolase C-terminal domain-like 124 279 1.2E-16 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 PANTHER PTHR13794:SF8 6 312 6.4E-112 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 Gene3D G3DSA:3.30.390.10 1 125 1.1E-48 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 306 1.2E-133 T 22-04-2016 APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 319 22.914 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 Gene3D G3DSA:3.20.20.120 126 302 1.1E-35 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 PANTHER PTHR13794 6 312 6.4E-112 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 SUPERFAMILY SSF54826 1 97 1.02E-29 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS12605 0a21287004163d27a7c5899288912e6b 320 SUPERFAMILY SSF51604 104 305 1.44E-50 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 Gene3D G3DSA:3.40.50.2300 6 134 4.7E-42 T 22-04-2016 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 Gene3D G3DSA:1.10.10.60 391 457 1.8E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 SUPERFAMILY SSF52172 6 190 7.68E-50 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 Pfam PF00072 Response regulator receiver domain 7 115 2.0E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 Gene3D G3DSA:1.10.8.60 318 390 3.4E-26 T 22-04-2016 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 Pfam PF02954 Bacterial regulatory protein, Fis family 415 454 4.7E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 Pfam PF00158 Sigma-54 interaction domain 146 311 3.3E-73 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 SMART SM00382 165 308 6.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 Gene3D G3DSA:3.40.50.300 144 317 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 SUPERFAMILY SSF52540 145 388 9.37E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 PANTHER PTHR32071:SF33 4 457 1.7E-254 T 22-04-2016 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 SUPERFAMILY SSF46689 358 457 1.43E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 PANTHER PTHR32071 4 457 1.7E-254 T 22-04-2016 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 SMART SM00448 5 116 4.1E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 1.4E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS12395 178a0ae97bb7201b9e00240c9b58f081 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 1.4E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 SMART SM00345 7 66 5.9E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 PANTHER PTHR11751:SF353 74 429 7.1E-123 T 22-04-2016 APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 Gene3D G3DSA:3.40.640.10 127 340 4.8E-51 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 SUPERFAMILY SSF46785 1 69 1.39E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 8.9E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 SUPERFAMILY SSF53383 81 443 6.7E-82 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 5.9E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 5.9E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 Pfam PF00155 Aminotransferase class I and II 126 385 1.6E-23 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 PANTHER PTHR11751 74 429 7.1E-123 T 22-04-2016 APECO1_RS15215 34b6d34d2537f3ae69ef19ad861f5e8c 444 Gene3D G3DSA:1.10.10.10 1 68 5.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 Pfam PF00106 short chain dehydrogenase 3 191 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 Gene3D G3DSA:3.40.50.720 2 251 3.5E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 PANTHER PTHR24322:SF463 146 178 8.2E-112 T 22-04-2016 APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 PANTHER PTHR24322:SF463 7 130 8.2E-112 T 22-04-2016 APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0089 T 22-04-2016 APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 PANTHER PTHR24322 146 178 8.2E-112 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 PANTHER PTHR24322 7 130 8.2E-112 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 SUPERFAMILY SSF51735 3 253 7.54E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 4.1E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 4.1E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.1E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 4.1E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.1E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS02540 361da73d99a715c04752e4ab50ea11e6 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS14755 68b46f64a2ba29bf2be618d38d1494cb 160 PANTHER PTHR30128 14 157 4.9E-93 T 22-04-2016 APECO1_RS14755 68b46f64a2ba29bf2be618d38d1494cb 160 Gene3D G3DSA:3.30.1330.60 46 158 5.2E-30 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS14755 68b46f64a2ba29bf2be618d38d1494cb 160 PANTHER PTHR30128:SF12 14 157 4.9E-93 T 22-04-2016 APECO1_RS14755 68b46f64a2ba29bf2be618d38d1494cb 160 PRINTS PR01021 OMPA domain signature 56 78 1.6E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS14755 68b46f64a2ba29bf2be618d38d1494cb 160 PRINTS PR01021 OMPA domain signature 86 101 1.6E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS14755 68b46f64a2ba29bf2be618d38d1494cb 160 PRINTS PR01021 OMPA domain signature 101 117 1.6E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS14755 68b46f64a2ba29bf2be618d38d1494cb 160 Pfam PF00691 OmpA family 55 151 5.8E-19 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS14755 68b46f64a2ba29bf2be618d38d1494cb 160 SUPERFAMILY SSF103088 45 157 1.57E-28 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS25500 4d368b618f2e1ffd56485bde5557501f 82 PANTHER PTHR36572:SF2 1 81 1.1E-23 T 22-04-2016 APECO1_RS25500 4d368b618f2e1ffd56485bde5557501f 82 SUPERFAMILY SSF54857 1 81 3.79E-25 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APECO1_RS25500 4d368b618f2e1ffd56485bde5557501f 82 PANTHER PTHR36572 1 81 1.1E-23 T 22-04-2016 APECO1_RS25500 4d368b618f2e1ffd56485bde5557501f 82 Pfam PF06183 DinI-like family 16 80 1.1E-18 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APECO1_RS25500 4d368b618f2e1ffd56485bde5557501f 82 Gene3D G3DSA:3.30.910.10 1 81 6.6E-32 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 SUPERFAMILY SSF103473 475 500 1.57E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 SUPERFAMILY SSF103473 9 196 1.57E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 SUPERFAMILY SSF103473 251 423 1.57E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 Pfam PF07690 Major Facilitator Superfamily 19 413 1.5E-53 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 PANTHER PTHR23501:SF52 2 504 0.0 T 22-04-2016 APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 Gene3D G3DSA:1.20.1250.20 266 424 6.4E-23 T 22-04-2016 APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 Gene3D G3DSA:1.20.1250.20 476 501 6.4E-23 T 22-04-2016 APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 Gene3D G3DSA:1.20.1250.20 16 199 2.4E-32 T 22-04-2016 APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 498 3.9E-219 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APECO1_RS15285 1dfda7e0ed905e864d3280b7f07d1f17 512 PANTHER PTHR23501 2 504 0.0 T 22-04-2016 APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 SUPERFAMILY SSF48008 98 230 2.88E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 SUPERFAMILY SSF46785 6 75 2.02E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 SMART SM00895 100 224 4.2E-20 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 5.0E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 PANTHER PTHR11751 94 116 1.2E-50 T 22-04-2016 APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 PANTHER PTHR11751 1 74 1.2E-50 T 22-04-2016 APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 Gene3D G3DSA:1.20.120.530 96 231 9.2E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 PANTHER PTHR11751:SF382 94 116 1.2E-50 T 22-04-2016 APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 PANTHER PTHR11751:SF382 1 74 1.2E-50 T 22-04-2016 APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 SMART SM00345 12 71 1.7E-25 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 Pfam PF07729 FCD domain 100 222 1.5E-22 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.4E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.4E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS20630 a0f3640dce08a2b1b9e3e73c42a4088a 258 Gene3D G3DSA:1.10.10.10 6 72 8.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11660 b4705a6bf3bf8a29a8d81110d2b8bb86 74 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 64 2.7E-11 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APECO1_RS11660 b4705a6bf3bf8a29a8d81110d2b8bb86 74 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APECO1_RS11660 b4705a6bf3bf8a29a8d81110d2b8bb86 74 PANTHER PTHR38777:SF1 1 70 3.9E-17 T 22-04-2016 APECO1_RS11660 b4705a6bf3bf8a29a8d81110d2b8bb86 74 PANTHER PTHR38777 1 70 3.9E-17 T 22-04-2016 APECO1_RS11660 b4705a6bf3bf8a29a8d81110d2b8bb86 74 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 2.3E-21 T 22-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type APECO1_RS11660 b4705a6bf3bf8a29a8d81110d2b8bb86 74 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 5.7E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APECO1_RS11660 b4705a6bf3bf8a29a8d81110d2b8bb86 74 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 5.7E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APECO1_RS11660 b4705a6bf3bf8a29a8d81110d2b8bb86 74 SUPERFAMILY SSF57716 34 71 5.42E-9 T 22-04-2016 APECO1_RS00035 3ffc5a82d8b510254de8da1091325e07 258 PANTHER PTHR30283:SF3 2 254 2.6E-124 T 22-04-2016 APECO1_RS00035 3ffc5a82d8b510254de8da1091325e07 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.281 T 22-04-2016 IPR005583 Peroxide stress protein YaaA APECO1_RS00035 3ffc5a82d8b510254de8da1091325e07 258 PANTHER PTHR30283 2 254 2.6E-124 T 22-04-2016 APECO1_RS00035 3ffc5a82d8b510254de8da1091325e07 258 Pfam PF03883 Protein of unknown function (DUF328) 1 243 2.5E-91 T 22-04-2016 IPR005583 Peroxide stress protein YaaA APECO1_RS13825 f4d66214f06d40969127ba8773e62cee 118 SUPERFAMILY SSF52833 1 115 1.0E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS13825 f4d66214f06d40969127ba8773e62cee 118 PANTHER PTHR30041:SF3 1 117 1.6E-44 T 22-04-2016 APECO1_RS13825 f4d66214f06d40969127ba8773e62cee 118 Pfam PF03960 ArsC family 5 114 1.6E-17 T 22-04-2016 IPR006660 Arsenate reductase-like APECO1_RS13825 f4d66214f06d40969127ba8773e62cee 118 Gene3D G3DSA:3.40.30.10 1 115 3.7E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS13825 f4d66214f06d40969127ba8773e62cee 118 PANTHER PTHR30041 1 117 1.6E-44 T 22-04-2016 APECO1_RS13825 f4d66214f06d40969127ba8773e62cee 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 115 2.0E-34 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR APECO1_RS15575 d91925f2886215ebe919e4872b02c7af 212 Gene3D G3DSA:3.40.225.10 8 211 1.0E-65 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS15575 d91925f2886215ebe919e4872b02c7af 212 SMART SM01007 13 192 2.1E-56 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS15575 d91925f2886215ebe919e4872b02c7af 212 PANTHER PTHR22789 1 211 3.7E-137 T 22-04-2016 APECO1_RS15575 d91925f2886215ebe919e4872b02c7af 212 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 190 7.9E-45 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS15575 d91925f2886215ebe919e4872b02c7af 212 SUPERFAMILY SSF53639 7 211 8.83E-60 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS15575 d91925f2886215ebe919e4872b02c7af 212 PANTHER PTHR22789:SF6 1 211 3.7E-137 T 22-04-2016 APECO1_RS02840 9c4c34ced4b6734475fd66686d0a9f50 400 Pfam PF00756 Putative esterase 172 391 7.7E-47 T 22-04-2016 IPR000801 Putative esterase APECO1_RS02840 9c4c34ced4b6734475fd66686d0a9f50 400 Pfam PF11806 Domain of unknown function (DUF3327) 29 155 5.9E-44 T 22-04-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 APECO1_RS02840 9c4c34ced4b6734475fd66686d0a9f50 400 Gene3D G3DSA:3.40.50.1820 146 395 5.9E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS02840 9c4c34ced4b6734475fd66686d0a9f50 400 PANTHER PTHR10907:SF55 69 354 2.0E-116 T 22-04-2016 APECO1_RS02840 9c4c34ced4b6734475fd66686d0a9f50 400 Gene3D G3DSA:2.60.40.10 3 144 5.6E-61 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS02840 9c4c34ced4b6734475fd66686d0a9f50 400 SUPERFAMILY SSF53474 155 393 1.71E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS02840 9c4c34ced4b6734475fd66686d0a9f50 400 SUPERFAMILY SSF81296 5 149 4.34E-53 T 22-04-2016 IPR014756 Immunoglobulin E-set APECO1_RS02840 9c4c34ced4b6734475fd66686d0a9f50 400 PANTHER PTHR10907 69 354 2.0E-116 T 22-04-2016 APECO1_RS16200 758864562368545ceea286db4b14cfbb 229 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 229 156.241 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 APECO1_RS16200 758864562368545ceea286db4b14cfbb 229 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 10 226 9.6E-116 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 APECO1_RS16200 758864562368545ceea286db4b14cfbb 229 Gene3D G3DSA:3.40.600.10 7 227 6.8E-81 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 APECO1_RS16200 758864562368545ceea286db4b14cfbb 229 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 2.3E-34 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 APECO1_RS16200 758864562368545ceea286db4b14cfbb 229 SUPERFAMILY SSF52980 7 228 6.97E-80 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APECO1_RS16200 758864562368545ceea286db4b14cfbb 229 SMART SM00927 59 157 2.4E-64 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 APECO1_RS08625 9a5f486f4422706dedcad896fdad476c 240 SUPERFAMILY SSF51735 9 239 5.16E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08625 9a5f486f4422706dedcad896fdad476c 240 Gene3D G3DSA:3.40.50.720 9 239 3.8E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08625 9a5f486f4422706dedcad896fdad476c 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 238 1.6E-22 T 22-04-2016 APECO1_RS08625 9a5f486f4422706dedcad896fdad476c 240 PANTHER PTHR24322 152 186 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08625 9a5f486f4422706dedcad896fdad476c 240 PANTHER PTHR24322 11 136 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08625 9a5f486f4422706dedcad896fdad476c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08625 9a5f486f4422706dedcad896fdad476c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08625 9a5f486f4422706dedcad896fdad476c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS08625 9a5f486f4422706dedcad896fdad476c 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS17405 218617d3685bde2e9aa96c97e6c50715 392 PANTHER PTHR30074 2 391 1.6E-272 T 22-04-2016 APECO1_RS17405 218617d3685bde2e9aa96c97e6c50715 392 PANTHER PTHR30074:SF4 2 391 1.6E-272 T 22-04-2016 APECO1_RS17405 218617d3685bde2e9aa96c97e6c50715 392 Pfam PF03916 Polysulphide reductase, NrfD 45 330 2.1E-18 T 22-04-2016 IPR005614 NrfD family APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 PANTHER PTHR30115 1 112 1.5E-83 T 22-04-2016 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 PANTHER PTHR30115:SF12 1 112 1.5E-83 T 22-04-2016 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 PIRSF PIRSF039144 1 112 6.2E-53 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.9E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 SMART SM00938 4 105 6.4E-61 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 Gene3D G3DSA:3.30.70.120 1 112 1.3E-47 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 SUPERFAMILY SSF54913 1 112 4.13E-42 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 52 75 2.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 23 41 2.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 83 103 2.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS02290 2c10f8c51446d7159794c9595ed25026 112 PRINTS PR00340 P-II protein signature 2 17 2.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APECO1_RS04510 cfe7687d5dd85c3d8480494c3151b7f8 165 Pfam PF00959 Phage lysozyme 34 152 5.9E-21 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APECO1_RS04510 cfe7687d5dd85c3d8480494c3151b7f8 165 Gene3D G3DSA:1.10.530.10 6 162 1.5E-55 T 22-04-2016 APECO1_RS04510 cfe7687d5dd85c3d8480494c3151b7f8 165 SUPERFAMILY SSF53955 7 162 5.62E-46 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS20880 08ac57ad5c39f08269ca08559f1ad31b 310 PANTHER PTHR18964:SF134 3 301 9.0E-83 T 22-04-2016 APECO1_RS20880 08ac57ad5c39f08269ca08559f1ad31b 310 SUPERFAMILY SSF53067 1 300 1.24E-61 T 22-04-2016 APECO1_RS20880 08ac57ad5c39f08269ca08559f1ad31b 310 Gene3D G3DSA:3.30.420.40 133 281 4.7E-43 T 22-04-2016 APECO1_RS20880 08ac57ad5c39f08269ca08559f1ad31b 310 Gene3D G3DSA:3.30.420.40 1 132 1.3E-37 T 22-04-2016 APECO1_RS20880 08ac57ad5c39f08269ca08559f1ad31b 310 Pfam PF00480 ROK family 3 299 2.1E-72 T 22-04-2016 IPR000600 ROK family APECO1_RS20880 08ac57ad5c39f08269ca08559f1ad31b 310 ProSitePatterns PS01125 ROK family signature. 131 158 - T 22-04-2016 IPR000600 ROK family APECO1_RS20880 08ac57ad5c39f08269ca08559f1ad31b 310 PANTHER PTHR18964 3 301 9.0E-83 T 22-04-2016 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 SMART SM00846 2 150 6.1E-83 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 Gene3D G3DSA:3.40.50.720 2 158 2.3E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 PIRSF PIRSF000149 1 333 7.4E-121 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 SUPERFAMILY SSF55347 150 314 3.27E-62 T 22-04-2016 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 PANTHER PTHR10836:SF57 1 333 1.3E-229 T 22-04-2016 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 313 8.5E-61 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 4.7E-135 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 SUPERFAMILY SSF51735 3 166 8.63E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 4.2E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 4.2E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 4.2E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 4.2E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 4.2E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 PANTHER PTHR10836 1 333 1.3E-229 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 3.4E-53 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS07890 b99049c54f10e4855e669068991298bb 333 Gene3D G3DSA:3.30.360.10 159 315 4.6E-65 T 22-04-2016 APECO1_RS00115 fb4da09f65b6c5940f6e07713a8e2d6f 87 Pfam PF01649 Ribosomal protein S20 2 84 2.4E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00115 fb4da09f65b6c5940f6e07713a8e2d6f 87 SUPERFAMILY SSF46992 3 86 1.57E-31 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00115 fb4da09f65b6c5940f6e07713a8e2d6f 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.208 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00115 fb4da09f65b6c5940f6e07713a8e2d6f 87 Gene3D G3DSA:1.20.58.110 3 87 2.4E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00115 fb4da09f65b6c5940f6e07713a8e2d6f 87 PANTHER PTHR33398 2 87 2.8E-40 T 22-04-2016 APECO1_RS00115 fb4da09f65b6c5940f6e07713a8e2d6f 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00115 fb4da09f65b6c5940f6e07713a8e2d6f 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 1.2E-34 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 SUPERFAMILY SSF53067 198 384 1.36E-47 T 22-04-2016 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 4.4E-30 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 PIRSF PIRSF003101 2 420 5.3E-153 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 298 359 1.4E-29 T 22-04-2016 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 210 234 1.4E-29 T 22-04-2016 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 Pfam PF14450 Cell division protein FtsA 207 381 9.4E-25 T 22-04-2016 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.576 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.90.640.10 235 297 4.3E-18 T 22-04-2016 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 SMART SM00842 10 196 1.1E-96 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 SUPERFAMILY SSF53067 8 221 1.94E-61 T 22-04-2016 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 6 138 2.1E-33 T 22-04-2016 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 Gene3D G3DSA:3.30.420.40 169 209 1.4E-5 T 22-04-2016 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 PANTHER PTHR32432:SF4 1 420 4.7E-183 T 22-04-2016 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.2E-161 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APECO1_RS00510 7b58e674ba3dcc106ceb417c9db138f7 420 PANTHER PTHR32432 1 420 4.7E-183 T 22-04-2016 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 Pfam PF00672 HAMP domain 70 136 2.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 Gene3D G3DSA:3.30.565.10 220 356 2.9E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 PANTHER PTHR24423 1 54 2.1E-193 T 22-04-2016 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 PANTHER PTHR24423 83 363 2.1E-193 T 22-04-2016 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 356 3.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 PANTHER PTHR24423:SF538 1 54 2.1E-193 T 22-04-2016 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 PANTHER PTHR24423:SF538 83 363 2.1E-193 T 22-04-2016 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 SUPERFAMILY SSF55874 192 354 1.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 Gene3D G3DSA:1.10.287.130 134 198 4.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 6.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 6.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 SUPERFAMILY SSF47384 126 199 2.55E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 SMART SM00388 142 202 3.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 SMART SM00304 89 141 4.3E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 200 5.4E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS23540 c46a17cb9a57e724ab13791dac6d6dba 363 SMART SM00387 249 357 2.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS21990 fe9d1d125a3874489b8ab024f6f6f6e5 443 PANTHER PTHR10804:SF101 1 440 1.8E-271 T 22-04-2016 APECO1_RS21990 fe9d1d125a3874489b8ab024f6f6f6e5 443 SUPERFAMILY SSF55920 163 438 1.83E-57 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS21990 fe9d1d125a3874489b8ab024f6f6f6e5 443 Pfam PF00557 Metallopeptidase family M24 168 430 3.2E-47 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS21990 fe9d1d125a3874489b8ab024f6f6f6e5 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.6 T 22-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 APECO1_RS21990 fe9d1d125a3874489b8ab024f6f6f6e5 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APECO1_RS21990 fe9d1d125a3874489b8ab024f6f6f6e5 443 Gene3D G3DSA:3.90.230.10 161 439 3.2E-56 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS21990 fe9d1d125a3874489b8ab024f6f6f6e5 443 PANTHER PTHR10804 1 440 1.8E-271 T 22-04-2016 APECO1_RS25670 9a9b3648a79df8034b8c0f80f829ee7b 228 SUPERFAMILY SSF75217 2 157 9.81E-31 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APECO1_RS25670 9a9b3648a79df8034b8c0f80f829ee7b 228 PIRSF PIRSF004808 1 228 2.4E-65 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APECO1_RS25670 9a9b3648a79df8034b8c0f80f829ee7b 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 1.7E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APECO1_RS25670 9a9b3648a79df8034b8c0f80f829ee7b 228 Gene3D G3DSA:3.40.1280.10 2 178 8.2E-28 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APECO1_RS25670 9a9b3648a79df8034b8c0f80f829ee7b 228 PANTHER PTHR12029:SF54 1 180 4.3E-112 T 22-04-2016 APECO1_RS25670 9a9b3648a79df8034b8c0f80f829ee7b 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 226 5.0E-83 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APECO1_RS25670 9a9b3648a79df8034b8c0f80f829ee7b 228 PANTHER PTHR12029 1 180 4.3E-112 T 22-04-2016 APECO1_RS12575 0889c413d9e83bd6b83f70c3fa06fe11 296 Pfam PF01522 Polysaccharide deacetylase 15 167 7.0E-13 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS12575 0889c413d9e83bd6b83f70c3fa06fe11 296 SUPERFAMILY SSF88713 85 266 1.72E-27 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APECO1_RS12575 0889c413d9e83bd6b83f70c3fa06fe11 296 SUPERFAMILY SSF88713 14 41 1.72E-27 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APECO1_RS12575 0889c413d9e83bd6b83f70c3fa06fe11 296 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 292 61.684 T 22-04-2016 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 UniPathway: UPA00030|UniPathway: UPA00036 APECO1_RS12575 0889c413d9e83bd6b83f70c3fa06fe11 296 Gene3D G3DSA:3.20.20.370 13 38 6.8E-27 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS12575 0889c413d9e83bd6b83f70c3fa06fe11 296 Gene3D G3DSA:3.20.20.370 82 267 6.8E-27 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 Gene3D G3DSA:3.40.50.300 28 269 2.0E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 SUPERFAMILY SSF54752 272 327 4.58E-21 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 Gene3D G3DSA:3.30.250.10 272 328 5.4E-28 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 SUPERFAMILY SSF52540 6 269 6.57E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 245 274 4.8E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 299 316 4.8E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 95 124 4.8E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 212 240 4.8E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 167 196 4.8E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 PRINTS PR00142 RecA protein signature 129 158 4.8E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 2.0E-173 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 SMART SM00382 59 230 4.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 Hamap MF_00268 Protein RecA [recA]. 7 331 50.992 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 Pfam PF00154 recA bacterial DNA recombination protein 9 270 1.9E-142 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 PANTHER PTHR22942:SF1 1 337 4.0E-206 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 PANTHER PTHR22942 1 337 4.0E-206 T 22-04-2016 APECO1_RS15370 ff9f96d7f45619daca23a25a01e0c64d 353 ProSitePatterns PS00321 recA signature. 215 223 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 Gene3D G3DSA:3.40.50.720 1 164 2.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 1.3E-37 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 61.662 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 2.6E-156 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 PIRSF PIRSF000103 1 295 4.2E-96 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 SUPERFAMILY SSF51735 2 164 1.41E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 PANTHER PTHR22981 1 296 8.0E-249 T 22-04-2016 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 PANTHER PTHR22981:SF78 1 296 8.0E-249 T 22-04-2016 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 SUPERFAMILY SSF48179 165 293 1.7E-36 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 4.2E-51 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APECO1_RS18090 475f4da9a0abbc1243c2e3fde249b9b2 296 Gene3D G3DSA:1.10.1040.10 166 294 3.7E-43 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS13645 b2fd22bcc1ef7d08695ca31feafa8c03 338 PANTHER PTHR30368:SF1 12 338 2.7E-259 T 22-04-2016 APECO1_RS13645 b2fd22bcc1ef7d08695ca31feafa8c03 338 PANTHER PTHR30368 12 338 2.7E-259 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APECO1_RS13645 b2fd22bcc1ef7d08695ca31feafa8c03 338 SUPERFAMILY SSF53850 24 332 5.64E-81 T 22-04-2016 APECO1_RS13645 b2fd22bcc1ef7d08695ca31feafa8c03 338 Gene3D G3DSA:3.40.190.10 26 168 9.1E-44 T 22-04-2016 APECO1_RS13645 b2fd22bcc1ef7d08695ca31feafa8c03 338 Gene3D G3DSA:3.40.190.10 177 301 6.2E-28 T 22-04-2016 APECO1_RS13645 b2fd22bcc1ef7d08695ca31feafa8c03 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 APECO1_RS13645 b2fd22bcc1ef7d08695ca31feafa8c03 338 Pfam PF13531 Bacterial extracellular solute-binding protein 38 286 1.6E-40 T 22-04-2016 APECO1_RS13645 b2fd22bcc1ef7d08695ca31feafa8c03 338 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 53 65 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 APECO1_RS13645 b2fd22bcc1ef7d08695ca31feafa8c03 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 332 1.3E-184 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APECO1_RS23265 d2d083b412e2d79ee2a31761464e1cee 136 PANTHER PTHR33931 7 135 2.2E-61 T 22-04-2016 APECO1_RS23265 d2d083b412e2d79ee2a31761464e1cee 136 PANTHER PTHR33931:SF3 7 135 2.2E-61 T 22-04-2016 APECO1_RS23265 d2d083b412e2d79ee2a31761464e1cee 136 Pfam PF03788 LrgA family 32 122 2.7E-25 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 486 495 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 SUPERFAMILY SSF55785 161 207 1.92E-8 T 22-04-2016 IPR000014 PAS domain APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 PANTHER PTHR32071 265 589 4.1E-158 T 22-04-2016 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 SMART SM00382 292 436 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 Gene3D G3DSA:1.10.8.60 446 524 6.3E-20 T 22-04-2016 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 SUPERFAMILY SSF52540 272 511 4.93E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 Gene3D G3DSA:1.10.10.60 540 589 9.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 359 374 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 Pfam PF13188 PAS domain 162 209 1.7E-6 T 22-04-2016 IPR000014 PAS domain APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 PANTHER PTHR32071:SF42 265 589 4.1E-158 T 22-04-2016 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 296 309 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 SMART SM00091 160 225 6.1E-5 T 22-04-2016 IPR000014 PAS domain APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 Pfam PF00158 Sigma-54 interaction domain 272 440 2.1E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 Gene3D G3DSA:3.40.50.300 269 445 9.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 Gene3D G3DSA:3.30.450.20 159 210 2.7E-8 T 22-04-2016 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 Pfam PF02954 Bacterial regulatory protein, Fis family 548 587 3.5E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS16300 fc1a727312c2e84849228193c1bc683b 592 SUPERFAMILY SSF46689 545 589 1.21E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS04995 af7bee077560d329a5f633ed3c428a87 436 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 29 374 6.2E-33 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 APECO1_RS04995 af7bee077560d329a5f633ed3c428a87 436 PANTHER PTHR41972 1 432 1.3E-203 T 22-04-2016 APECO1_RS04995 af7bee077560d329a5f633ed3c428a87 436 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 30 44 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site APECO1_RS04995 af7bee077560d329a5f633ed3c428a87 436 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 319 335 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site APECO1_RS04995 af7bee077560d329a5f633ed3c428a87 436 SUPERFAMILY SSF53254 26 429 8.75E-81 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS04995 af7bee077560d329a5f633ed3c428a87 436 Gene3D G3DSA:3.40.50.1240 140 280 1.2E-52 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS04995 af7bee077560d329a5f633ed3c428a87 436 Gene3D G3DSA:3.40.50.1240 27 139 1.7E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS04995 af7bee077560d329a5f633ed3c428a87 436 Gene3D G3DSA:3.40.50.1240 282 434 1.7E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 PANTHER PTHR22960 5 285 1.0E-133 T 22-04-2016 APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 SUPERFAMILY SSF102114 5 290 4.58E-71 T 22-04-2016 APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 37.81 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 Gene3D G3DSA:3.20.20.70 3 303 2.8E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 SMART SM00729 14 226 1.8E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 3.2E-7 T 22-04-2016 APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 5.6E-39 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 Pfam PF04055 Radical SAM superfamily 19 181 8.0E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS03785 868a2b5f53c0fa0cd67dad022d2ced94 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 5.0E-111 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 PANTHER PTHR32305:SF11 6 617 2.3E-192 T 22-04-2016 APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 Pfam PF05954 Phage late control gene D protein (GPD) 34 326 1.3E-70 T 22-04-2016 APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 SUPERFAMILY SSF69349 440 658 2.2E-45 T 22-04-2016 APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 SUPERFAMILY SSF69255 362 449 5.49E-33 T 22-04-2016 APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 501 1.0E-128 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 SUPERFAMILY SSF69279 8 186 7.37E-47 T 22-04-2016 APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 Gene3D G3DSA:2.40.50.230 368 449 1.4E-40 T 22-04-2016 IPR006531 Gp5 N-terminal APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 SUPERFAMILY SSF69279 190 363 2.72E-45 T 22-04-2016 APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 519 1.3E-180 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 PANTHER PTHR32305 6 617 2.3E-192 T 22-04-2016 APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 501 523 6.8E-5 T 22-04-2016 IPR010609 Gp5, C-terminal APECO1_RS01230 01dfbc6a668e1314605e1e8f217ef7de 660 Gene3D G3DSA:3.55.50.10 97 190 1.4E-29 T 22-04-2016 APECO1_RS17390 5fc6697c8827cb9e23ed668f84ab456a 162 Pfam PF11939 Protein of unknown function (DUF3457) 12 155 5.0E-42 T 22-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE APECO1_RS17390 5fc6697c8827cb9e23ed668f84ab456a 162 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 16 157 3.0E-67 T 22-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE APECO1_RS17390 5fc6697c8827cb9e23ed668f84ab456a 162 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 16 153 7.7E-48 T 22-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE APECO1_RS16640 c9494cbb66138926a60666b44224d4bd 252 Pfam PF01435 Peptidase family M48 72 245 1.7E-25 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APECO1_RS16640 c9494cbb66138926a60666b44224d4bd 252 PANTHER PTHR22726 1 249 2.0E-153 T 22-04-2016 APECO1_RS16640 c9494cbb66138926a60666b44224d4bd 252 Gene3D G3DSA:3.30.2010.10 65 145 2.2E-23 T 22-04-2016 APECO1_RS16640 c9494cbb66138926a60666b44224d4bd 252 PANTHER PTHR22726:SF4 1 249 2.0E-153 T 22-04-2016 APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 SUPERFAMILY SSF46785 3 113 1.42E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 Gene3D G3DSA:3.40.190.10 178 261 9.1E-19 T 22-04-2016 APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 PANTHER PTHR30419:SF3 1 308 2.9E-141 T 22-04-2016 APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 Pfam PF03466 LysR substrate binding domain 89 292 2.1E-44 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.1E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 SUPERFAMILY SSF53850 89 296 2.02E-42 T 22-04-2016 APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 Gene3D G3DSA:1.10.10.10 4 88 6.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 Gene3D G3DSA:3.40.190.10 92 177 5.6E-15 T 22-04-2016 APECO1_RS13565 0caddec7495aca38d6a46b7e6a2f583c 308 PANTHER PTHR30419 1 308 2.9E-141 T 22-04-2016 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 Gene3D G3DSA:1.10.3120.10 37 115 4.1E-4 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 Pfam PF00639 PPIC-type PPIASE domain 178 272 1.9E-20 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 SUPERFAMILY SSF54534 283 385 1.37E-32 T 22-04-2016 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 212 232 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 Gene3D G3DSA:3.10.50.40 166 277 1.1E-32 T 22-04-2016 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 Gene3D G3DSA:3.10.50.40 282 406 5.0E-37 T 22-04-2016 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 SUPERFAMILY SSF109998 25 201 5.2E-43 T 22-04-2016 IPR027304 Trigger factor/SurA domain APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 SUPERFAMILY SSF54534 173 275 3.86E-28 T 22-04-2016 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 Pfam PF09312 SurA N-terminal domain 25 142 1.8E-45 T 22-04-2016 IPR015391 SurA N-terminal APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 PANTHER PTHR10657:SF15 1 428 3.8E-176 T 22-04-2016 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 PANTHER PTHR10657 1 428 3.8E-176 T 22-04-2016 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 Pfam PF13616 PPIC-type PPIASE domain 282 383 2.4E-26 T 22-04-2016 APECO1_RS00305 3279d575a3d10c30c51847f89440205b 428 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.445 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 SUPERFAMILY SSF53822 10 298 7.79E-46 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 SUPERFAMILY SSF46689 338 385 3.12E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 Gene3D G3DSA:1.10.10.60 338 385 1.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 PANTHER PTHR30146 8 320 3.1E-180 T 22-04-2016 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 PANTHER PTHR30146:SF24 8 320 3.1E-180 T 22-04-2016 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 SMART SM00342 301 384 1.2E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 2.4E-37 T 22-04-2016 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 SUPERFAMILY SSF46689 284 333 3.86E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 Gene3D G3DSA:1.10.10.60 283 335 2.4E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 Gene3D G3DSA:3.40.50.2300 58 117 2.0E-5 T 22-04-2016 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 6.5E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 6.5E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 Gene3D G3DSA:3.40.50.2300 118 251 1.2E-24 T 22-04-2016 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 Pfam PF12833 Helix-turn-helix domain 309 384 2.6E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS20460 00a82d6c6e0d7f1ab456ff684a37cabf 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS01830 40dd9713d6598a7c15991d071c422228 319 Pfam PF13377 Periplasmic binding protein-like domain 130 288 6.2E-33 T 22-04-2016 APECO1_RS01830 40dd9713d6598a7c15991d071c422228 319 PANTHER PTHR30146:SF34 1 316 2.9E-157 T 22-04-2016 APECO1_RS01830 40dd9713d6598a7c15991d071c422228 319 Gene3D G3DSA:3.40.50.2300 136 270 9.6E-46 T 22-04-2016 APECO1_RS01830 40dd9713d6598a7c15991d071c422228 319 Gene3D G3DSA:3.40.50.2300 22 135 3.8E-42 T 22-04-2016 APECO1_RS01830 40dd9713d6598a7c15991d071c422228 319 PANTHER PTHR30146 1 316 2.9E-157 T 22-04-2016 APECO1_RS01830 40dd9713d6598a7c15991d071c422228 319 SUPERFAMILY SSF53822 20 285 2.36E-55 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS19970 c20f0afa5e276e91f28392bdfa13acd9 283 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 274 7.2E-66 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS19970 c20f0afa5e276e91f28392bdfa13acd9 283 PANTHER PTHR30304 1 276 3.1E-76 T 22-04-2016 APECO1_RS19970 c20f0afa5e276e91f28392bdfa13acd9 283 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS19970 c20f0afa5e276e91f28392bdfa13acd9 283 Pfam PF01116 Fructose-bisphosphate aldolase class-II 7 276 1.3E-77 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS19970 c20f0afa5e276e91f28392bdfa13acd9 283 SUPERFAMILY SSF51569 1 276 2.49E-76 T 22-04-2016 APECO1_RS19970 c20f0afa5e276e91f28392bdfa13acd9 283 PIRSF PIRSF001359 1 281 4.7E-73 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS19970 c20f0afa5e276e91f28392bdfa13acd9 283 Gene3D G3DSA:3.20.20.70 1 277 1.9E-84 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS14475 31471d62e68ea72585fee51357888aa6 282 PANTHER PTHR30514:SF5 1 275 1.2E-192 T 22-04-2016 APECO1_RS14475 31471d62e68ea72585fee51357888aa6 282 Pfam PF01380 SIS domain 128 258 9.9E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS14475 31471d62e68ea72585fee51357888aa6 282 PANTHER PTHR30514 1 275 1.2E-192 T 22-04-2016 APECO1_RS14475 31471d62e68ea72585fee51357888aa6 282 Gene3D G3DSA:3.40.50.10490 101 262 4.1E-31 T 22-04-2016 APECO1_RS14475 31471d62e68ea72585fee51357888aa6 282 Gene3D G3DSA:1.10.10.10 1 77 3.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS14475 31471d62e68ea72585fee51357888aa6 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.3E-29 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APECO1_RS14475 31471d62e68ea72585fee51357888aa6 282 SUPERFAMILY SSF53697 105 278 1.41E-30 T 22-04-2016 APECO1_RS14475 31471d62e68ea72585fee51357888aa6 282 SUPERFAMILY SSF46689 1 77 3.4E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS03775 f9ae2f21d6a104792012216e85de52cd 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 32.606 T 22-04-2016 IPR010119 Gluconeogenesis factor APECO1_RS03775 f9ae2f21d6a104792012216e85de52cd 302 Gene3D G3DSA:3.40.50.10680 82 299 4.6E-55 T 22-04-2016 APECO1_RS03775 f9ae2f21d6a104792012216e85de52cd 302 PANTHER PTHR30135 1 302 1.0E-120 T 22-04-2016 APECO1_RS03775 f9ae2f21d6a104792012216e85de52cd 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 289 1.2E-79 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 APECO1_RS03775 f9ae2f21d6a104792012216e85de52cd 302 SUPERFAMILY SSF142338 11 295 5.1E-87 T 22-04-2016 APECO1_RS03775 f9ae2f21d6a104792012216e85de52cd 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 296 3.8E-105 T 22-04-2016 IPR010119 Gluconeogenesis factor APECO1_RS15750 1fe875dfd78ad6eb89818330ba9c115a 204 PANTHER PTHR34478 1 200 5.8E-66 T 22-04-2016 APECO1_RS15750 1fe875dfd78ad6eb89818330ba9c115a 204 Gene3D G3DSA:1.20.1440.20 13 197 1.0E-53 T 22-04-2016 IPR023353 LemA-like domain APECO1_RS15750 1fe875dfd78ad6eb89818330ba9c115a 204 PANTHER PTHR34478:SF2 1 200 5.8E-66 T 22-04-2016 APECO1_RS15750 1fe875dfd78ad6eb89818330ba9c115a 204 Pfam PF04011 LemA family 5 197 2.0E-55 T 22-04-2016 IPR007156 LemA APECO1_RS15750 1fe875dfd78ad6eb89818330ba9c115a 204 SUPERFAMILY SSF140478 22 182 2.09E-45 T 22-04-2016 IPR023353 LemA-like domain APECO1_RS20250 ffbd4974de290d12c1e6dc51a8cf4c04 250 SUPERFAMILY SSF52540 3 235 9.95E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20250 ffbd4974de290d12c1e6dc51a8cf4c04 250 Gene3D G3DSA:3.40.50.300 10 236 2.2E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20250 ffbd4974de290d12c1e6dc51a8cf4c04 250 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 239 1.7E-89 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ APECO1_RS20250 ffbd4974de290d12c1e6dc51a8cf4c04 250 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 236 4.3E-109 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ APECO1_RS20250 ffbd4974de290d12c1e6dc51a8cf4c04 250 PANTHER PTHR13696 1 246 1.8E-22 T 22-04-2016 APECO1_RS05725 307e4dafc622b419abd71db1a90ceebe 153 PANTHER PTHR22769:SF14 1 145 6.7E-34 T 22-04-2016 APECO1_RS05725 307e4dafc622b419abd71db1a90ceebe 153 Pfam PF00293 NUDIX domain 4 114 8.0E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS05725 307e4dafc622b419abd71db1a90ceebe 153 PRINTS PR00502 NUDIX hydrolase family signature 45 60 8.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS05725 307e4dafc622b419abd71db1a90ceebe 153 PRINTS PR00502 NUDIX hydrolase family signature 31 45 8.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS05725 307e4dafc622b419abd71db1a90ceebe 153 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS05725 307e4dafc622b419abd71db1a90ceebe 153 PANTHER PTHR22769 1 145 6.7E-34 T 22-04-2016 APECO1_RS05725 307e4dafc622b419abd71db1a90ceebe 153 Gene3D G3DSA:3.90.79.10 2 143 9.1E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS05725 307e4dafc622b419abd71db1a90ceebe 153 SUPERFAMILY SSF55811 5 152 1.14E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 SUPERFAMILY SSF51735 3 159 3.06E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 266 2.0E-38 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 Gene3D G3DSA:3.40.50.720 1 159 2.1E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 SUPERFAMILY SSF48179 162 268 2.55E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 5.3E-24 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 Gene3D G3DSA:1.10.3730.10 162 266 9.0E-43 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 26.796 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 PIRSF PIRSF000193 2 269 6.3E-99 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 PANTHER PTHR11645 1 269 5.5E-124 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 PANTHER PTHR11645:SF0 1 269 5.5E-124 T 22-04-2016 APECO1_RS01965 f84c7f16a1175f5dd0f1ab9e2a30afe8 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 1.9E-92 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 TIGRFAM TIGR02649 true_RNase_BN: ribonuclease BN 2 304 5.2E-203 T 22-04-2016 IPR013469 Ribonuclease BN GO:0016891|GO:0042779 APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 Gene3D G3DSA:3.60.15.10 1 157 2.7E-85 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 Gene3D G3DSA:3.60.15.10 196 305 2.7E-85 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 Pfam PF12706 Beta-lactamase superfamily domain 202 270 9.8E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 Pfam PF12706 Beta-lactamase superfamily domain 36 154 2.6E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 SUPERFAMILY SSF56281 1 304 3.67E-89 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 PANTHER PTHR12553 1 152 2.4E-93 T 22-04-2016 APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 PANTHER PTHR12553 183 305 2.4E-93 T 22-04-2016 APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 SMART SM00849 18 212 0.0097 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 1.1E-103 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 APECO1_RS12640 2873428404620d49ec57664d1edd5791 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 40.356 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 SUPERFAMILY SSF46785 4 59 1.29E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 SUPERFAMILY SSF100950 76 233 1.15E-27 T 22-04-2016 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 Pfam PF00455 DeoR C terminal sensor domain 76 233 1.1E-44 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 2.6E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 2.6E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 PANTHER PTHR30363 1 241 9.9E-200 T 22-04-2016 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 Gene3D G3DSA:1.10.10.10 1 48 9.8E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 Gene3D G3DSA:3.40.50.1360 78 214 1.5E-8 T 22-04-2016 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 SMART SM01134 74 234 2.6E-51 T 22-04-2016 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 4.1E-20 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 PANTHER PTHR30363:SF12 1 241 9.9E-200 T 22-04-2016 APECO1_RS15905 db6c607e7f37ea4ea19a7a3a10ad0d9f 243 SMART SM00420 5 57 4.8E-21 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS19235 1b7b0a2d8a60036640d730e6f05a029d 183 SUPERFAMILY SSF52218 5 176 1.51E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS19235 1b7b0a2d8a60036640d730e6f05a029d 183 PANTHER PTHR10204 5 176 1.3E-81 T 22-04-2016 APECO1_RS19235 1b7b0a2d8a60036640d730e6f05a029d 183 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 1 182 48.312 T 22-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APECO1_RS19235 1b7b0a2d8a60036640d730e6f05a029d 183 PANTHER PTHR10204:SF42 5 176 1.3E-81 T 22-04-2016 APECO1_RS19235 1b7b0a2d8a60036640d730e6f05a029d 183 Gene3D G3DSA:3.40.50.360 6 176 2.8E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS19235 1b7b0a2d8a60036640d730e6f05a029d 183 Pfam PF02525 Flavodoxin-like fold 6 171 2.8E-39 T 22-04-2016 IPR003680 Flavodoxin-like fold APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 PANTHER PTHR30031 8 540 0.0 T 22-04-2016 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 Pfam PF01293 Phosphoenolpyruvate carboxykinase 22 491 1.5E-212 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 265 280 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 540 1.2E-298 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 SUPERFAMILY SSF68923 9 227 1.17E-91 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 16 538 56.554 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 Gene3D G3DSA:3.90.228.20 228 290 4.6E-122 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 Gene3D G3DSA:3.90.228.20 351 539 4.6E-122 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 PANTHER PTHR30031:SF0 8 540 0.0 T 22-04-2016 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 SUPERFAMILY SSF53795 229 540 5.36E-131 T 22-04-2016 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 PIRSF PIRSF006294 3 540 1.3E-234 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APECO1_RS19475 fe5a6ec69335d7c2c3b393017fcfa135 540 Gene3D G3DSA:3.40.449.10 22 227 3.7E-89 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APECO1_RS05530 735606a827754faf7d8ada40a20f3ef2 269 SUPERFAMILY SSF56752 2 264 3.53E-70 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APECO1_RS05530 735606a827754faf7d8ada40a20f3ef2 269 Gene3D G3DSA:3.30.470.10 1 106 1.4E-32 T 22-04-2016 APECO1_RS05530 735606a827754faf7d8ada40a20f3ef2 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 APECO1_RS05530 735606a827754faf7d8ada40a20f3ef2 269 PANTHER PTHR11825:SF55 11 249 5.1E-93 T 22-04-2016 APECO1_RS05530 735606a827754faf7d8ada40a20f3ef2 269 Gene3D G3DSA:3.20.10.10 123 262 1.3E-44 T 22-04-2016 APECO1_RS05530 735606a827754faf7d8ada40a20f3ef2 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 4.9E-114 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 APECO1_RS05530 735606a827754faf7d8ada40a20f3ef2 269 PANTHER PTHR11825 11 249 5.1E-93 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APECO1_RS05530 735606a827754faf7d8ada40a20f3ef2 269 Pfam PF01063 Amino-transferase class IV 24 246 1.3E-49 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APECO1_RS19205 ef1fc8010739057d521c2c08f6fa32f9 240 PANTHER PTHR35568:SF3 10 237 5.7E-183 T 22-04-2016 APECO1_RS19205 ef1fc8010739057d521c2c08f6fa32f9 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 6.0E-71 T 22-04-2016 IPR013559 YheO-like APECO1_RS19205 ef1fc8010739057d521c2c08f6fa32f9 240 PANTHER PTHR35568 10 237 5.7E-183 T 22-04-2016 APECO1_RS19205 ef1fc8010739057d521c2c08f6fa32f9 240 Pfam PF08348 YheO-like PAS domain 29 137 2.2E-35 T 22-04-2016 IPR013559 YheO-like APECO1_RS19205 ef1fc8010739057d521c2c08f6fa32f9 240 Pfam PF13309 HTH domain 171 228 2.9E-19 T 22-04-2016 APECO1_RS01110 4c991d24375147672387b8f55871976f 452 Pfam PF01464 Transglycosylase SLT domain 102 216 1.1E-29 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APECO1_RS01110 4c991d24375147672387b8f55871976f 452 SUPERFAMILY SSF54106 400 443 2.49E-10 T 22-04-2016 IPR018392 LysM domain APECO1_RS01110 4c991d24375147672387b8f55871976f 452 Pfam PF01476 LysM domain 402 441 1.1E-9 T 22-04-2016 IPR018392 LysM domain APECO1_RS01110 4c991d24375147672387b8f55871976f 452 Pfam PF01476 LysM domain 343 384 2.2E-14 T 22-04-2016 IPR018392 LysM domain APECO1_RS01110 4c991d24375147672387b8f55871976f 452 Gene3D G3DSA:3.10.350.10 399 443 1.2E-17 T 22-04-2016 IPR018392 LysM domain APECO1_RS01110 4c991d24375147672387b8f55871976f 452 Gene3D G3DSA:3.10.350.10 340 384 9.9E-20 T 22-04-2016 IPR018392 LysM domain APECO1_RS01110 4c991d24375147672387b8f55871976f 452 SUPERFAMILY SSF54106 341 384 9.29E-12 T 22-04-2016 IPR018392 LysM domain APECO1_RS01110 4c991d24375147672387b8f55871976f 452 SMART SM00257 342 385 1.4E-16 T 22-04-2016 IPR018392 LysM domain APECO1_RS01110 4c991d24375147672387b8f55871976f 452 SMART SM00257 401 443 4.6E-13 T 22-04-2016 IPR018392 LysM domain APECO1_RS01110 4c991d24375147672387b8f55871976f 452 Gene3D G3DSA:1.10.530.10 97 257 2.1E-47 T 22-04-2016 APECO1_RS01110 4c991d24375147672387b8f55871976f 452 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 121 149 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APECO1_RS01110 4c991d24375147672387b8f55871976f 452 SUPERFAMILY SSF53955 99 249 1.13E-41 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS01110 4c991d24375147672387b8f55871976f 452 PANTHER PTHR21666 16 443 2.8E-218 T 22-04-2016 APECO1_RS01110 4c991d24375147672387b8f55871976f 452 PANTHER PTHR21666:SF206 16 443 2.8E-218 T 22-04-2016 APECO1_RS12225 050e85c2c0280cdc84a4e429da1237a5 586 Gene3D G3DSA:3.40.720.10 261 520 5.2E-32 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS12225 050e85c2c0280cdc84a4e429da1237a5 586 SUPERFAMILY SSF53649 257 570 8.64E-54 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS12225 050e85c2c0280cdc84a4e429da1237a5 586 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 4.0E-106 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal APECO1_RS12225 050e85c2c0280cdc84a4e429da1237a5 586 PANTHER PTHR10342:SF215 540 567 1.1E-173 T 22-04-2016 APECO1_RS12225 050e85c2c0280cdc84a4e429da1237a5 586 PANTHER PTHR10342:SF215 232 519 1.1E-173 T 22-04-2016 APECO1_RS12225 050e85c2c0280cdc84a4e429da1237a5 586 PIRSF PIRSF004950 6 586 2.8E-223 T 22-04-2016 IPR012159 Inner membrane protein YejM APECO1_RS12225 050e85c2c0280cdc84a4e429da1237a5 586 Pfam PF00884 Sulfatase 260 500 1.7E-32 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS12225 050e85c2c0280cdc84a4e429da1237a5 586 PANTHER PTHR10342 540 567 1.1E-173 T 22-04-2016 APECO1_RS12225 050e85c2c0280cdc84a4e429da1237a5 586 PANTHER PTHR10342 232 519 1.1E-173 T 22-04-2016 APECO1_RS07280 44984902bd05f36f5bd8129454996cd1 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 128 5.5E-32 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APECO1_RS07280 44984902bd05f36f5bd8129454996cd1 351 SUPERFAMILY SSF51735 5 158 4.34E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07280 44984902bd05f36f5bd8129454996cd1 351 Gene3D G3DSA:3.30.360.10 145 346 4.2E-47 T 22-04-2016 APECO1_RS07280 44984902bd05f36f5bd8129454996cd1 351 PANTHER PTHR22604 3 351 2.7E-200 T 22-04-2016 APECO1_RS07280 44984902bd05f36f5bd8129454996cd1 351 PANTHER PTHR22604:SF130 3 351 2.7E-200 T 22-04-2016 APECO1_RS07280 44984902bd05f36f5bd8129454996cd1 351 Gene3D G3DSA:3.40.50.720 4 144 9.4E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07280 44984902bd05f36f5bd8129454996cd1 351 SUPERFAMILY SSF55347 138 287 3.6E-23 T 22-04-2016 APECO1_RS07280 44984902bd05f36f5bd8129454996cd1 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 249 3.1E-14 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APECO1_RS07115 56f79aae5057c73d4c2beb937bad2deb 72 Pfam PF05433 Glycine zipper 2TM domain 34 71 7.6E-8 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APECO1_RS07115 56f79aae5057c73d4c2beb937bad2deb 72 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 12 34 2.0E-6 T 22-04-2016 APECO1_RS09350 c47b75a203aaa4c4144e6dd9a94d1cc3 322 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 46 320 2.4E-72 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 APECO1_RS09350 c47b75a203aaa4c4144e6dd9a94d1cc3 322 PANTHER PTHR15162 1 322 8.0E-107 T 22-04-2016 APECO1_RS09350 c47b75a203aaa4c4144e6dd9a94d1cc3 322 PIRSF PIRSF017020 1 322 7.8E-118 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 APECO1_RS09350 c47b75a203aaa4c4144e6dd9a94d1cc3 322 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 318 9.4E-145 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 APECO1_RS09350 c47b75a203aaa4c4144e6dd9a94d1cc3 322 Gene3D G3DSA:3.40.630.10 45 235 3.3E-14 T 22-04-2016 APECO1_RS09350 c47b75a203aaa4c4144e6dd9a94d1cc3 322 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 322 151.923 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 APECO1_RS09350 c47b75a203aaa4c4144e6dd9a94d1cc3 322 SUPERFAMILY SSF53187 1 319 3.31E-92 T 22-04-2016 APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 Gene3D G3DSA:3.40.50.2300 9 156 5.9E-39 T 22-04-2016 APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 PANTHER PTHR26402 11 240 1.2E-140 T 22-04-2016 APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 Pfam PF00072 Response regulator receiver domain 13 121 1.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 PANTHER PTHR26402:SF530 11 240 1.2E-140 T 22-04-2016 APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 1.6E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 SUPERFAMILY SSF52172 6 138 9.96E-40 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 SUPERFAMILY SSF46894 142 234 3.97E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 Gene3D G3DSA:1.10.10.10 157 235 3.5E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 SMART SM00862 156 232 2.2E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS11525 2a7a296687bb30a43a16c69021e7bb87 240 SMART SM00448 11 121 6.2E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS23895 f9777b7a1089c05fb57c25a7c04b179f 372 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 155 183 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS23895 f9777b7a1089c05fb57c25a7c04b179f 372 PANTHER PTHR11496:SF71 9 370 1.2E-136 T 22-04-2016 APECO1_RS23895 f9777b7a1089c05fb57c25a7c04b179f 372 PANTHER PTHR11496 9 370 1.2E-136 T 22-04-2016 APECO1_RS23895 f9777b7a1089c05fb57c25a7c04b179f 372 Gene3D G3DSA:3.40.50.1970 5 166 1.8E-43 T 22-04-2016 APECO1_RS23895 f9777b7a1089c05fb57c25a7c04b179f 372 SUPERFAMILY SSF56796 4 367 7.33E-106 T 22-04-2016 APECO1_RS23895 f9777b7a1089c05fb57c25a7c04b179f 372 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 363 2.9E-109 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS23895 f9777b7a1089c05fb57c25a7c04b179f 372 Gene3D G3DSA:1.20.1090.10 167 367 1.2E-65 T 22-04-2016 APECO1_RS12010 f475b9290c7ccf7c7e7a9d161fdb9dd3 336 PANTHER PTHR32196 1 336 6.0E-234 T 22-04-2016 APECO1_RS12010 f475b9290c7ccf7c7e7a9d161fdb9dd3 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 5.4E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS12010 f475b9290c7ccf7c7e7a9d161fdb9dd3 336 PANTHER PTHR32196:SF18 1 336 6.0E-234 T 22-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 APECO1_RS03290 bd1a6d899f0f7c3c3e2ab3d4d844cbfd 328 PANTHER PTHR30004:SF6 2 328 5.0E-150 T 22-04-2016 APECO1_RS03290 bd1a6d899f0f7c3c3e2ab3d4d844cbfd 328 SUPERFAMILY SSF53659 4 326 7.29E-108 T 22-04-2016 APECO1_RS03290 bd1a6d899f0f7c3c3e2ab3d4d844cbfd 328 PANTHER PTHR30004 2 328 5.0E-150 T 22-04-2016 APECO1_RS03290 bd1a6d899f0f7c3c3e2ab3d4d844cbfd 328 Gene3D G3DSA:3.40.718.10 3 327 3.0E-125 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS03290 bd1a6d899f0f7c3c3e2ab3d4d844cbfd 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 9.9E-103 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APECO1_RS03290 bd1a6d899f0f7c3c3e2ab3d4d844cbfd 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 326 34.918 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APECO1_RS03290 bd1a6d899f0f7c3c3e2ab3d4d844cbfd 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 325 2.6E-111 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APECO1_RS24690 abd5ee8afee2272ac10ed777df78d71d 150 Pfam PF04074 Domain of unknown function (DUF386) 1 147 4.8E-44 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS24690 abd5ee8afee2272ac10ed777df78d71d 150 PANTHER PTHR34986 2 150 6.6E-74 T 22-04-2016 APECO1_RS24690 abd5ee8afee2272ac10ed777df78d71d 150 SUPERFAMILY SSF51197 1 148 4.39E-41 T 22-04-2016 APECO1_RS24690 abd5ee8afee2272ac10ed777df78d71d 150 Gene3D G3DSA:2.60.120.370 1 148 1.2E-47 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS24690 abd5ee8afee2272ac10ed777df78d71d 150 PANTHER PTHR34986:SF1 2 150 6.6E-74 T 22-04-2016 APECO1_RS24690 abd5ee8afee2272ac10ed777df78d71d 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 148 4.2E-57 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS10095 fd56555bf7be884ab313102eaabc0485 167 Pfam PF01584 CheW-like domain 18 154 7.4E-36 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APECO1_RS10095 fd56555bf7be884ab313102eaabc0485 167 Gene3D G3DSA:2.40.50.180 56 92 2.0E-9 T 22-04-2016 APECO1_RS10095 fd56555bf7be884ab313102eaabc0485 167 Gene3D G3DSA:2.30.30.40 93 144 1.5E-9 T 22-04-2016 APECO1_RS10095 fd56555bf7be884ab313102eaabc0485 167 SUPERFAMILY SSF50341 15 156 5.23E-39 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APECO1_RS10095 fd56555bf7be884ab313102eaabc0485 167 PANTHER PTHR22617 1 167 2.2E-61 T 22-04-2016 APECO1_RS10095 fd56555bf7be884ab313102eaabc0485 167 SMART SM00260 14 151 6.2E-49 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 SUPERFAMILY SSF53807 34 291 1.02E-57 T 22-04-2016 APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 9.2E-59 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 208 226 9.2E-59 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 236 253 9.2E-59 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 9.2E-59 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 273 286 9.2E-59 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 184 199 9.2E-59 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PANTHER PTHR30532 34 295 4.0E-80 T 22-04-2016 APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 PANTHER PTHR30532:SF1 34 295 4.0E-80 T 22-04-2016 APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 Pfam PF01497 Periplasmic binding protein 38 269 1.2E-26 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 Gene3D G3DSA:3.40.50.1980 34 120 1.4E-31 T 22-04-2016 APECO1_RS00820 ccdc6917b513c93d4cbd68d5d8e1e1f3 296 Gene3D G3DSA:3.40.50.1980 124 294 1.8E-64 T 22-04-2016 APECO1_RS21585 54d077afcb2ac05a1124980a082b1247 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 39.642 T 22-04-2016 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 UniPathway: UPA00566 APECO1_RS21585 54d077afcb2ac05a1124980a082b1247 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 2.7E-8 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APECO1_RS21585 54d077afcb2ac05a1124980a082b1247 416 PANTHER PTHR30250 3 414 6.8E-178 T 22-04-2016 APECO1_RS21585 54d077afcb2ac05a1124980a082b1247 416 PANTHER PTHR30250:SF9 3 414 6.8E-178 T 22-04-2016 APECO1_RS16080 2bb6da55b13be831f95f62ad69af3c7f 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 19 166 6.3E-34 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN APECO1_RS16080 2bb6da55b13be831f95f62ad69af3c7f 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 159 4.8E-23 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN APECO1_RS16080 2bb6da55b13be831f95f62ad69af3c7f 178 PANTHER PTHR37625:SF1 1 177 1.5E-39 T 22-04-2016 APECO1_RS16080 2bb6da55b13be831f95f62ad69af3c7f 178 PANTHER PTHR37625 1 177 1.5E-39 T 22-04-2016 APECO1_RS26425 72d9cb73b67c04d2cce47c9006f1bc04 50 SUPERFAMILY SSF52518 1 50 5.89E-17 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS26425 72d9cb73b67c04d2cce47c9006f1bc04 50 Gene3D G3DSA:3.40.50.970 1 50 2.2E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.699 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 PANTHER PTHR10277:SF9 1 508 2.4E-260 T 22-04-2016 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 Gene3D G3DSA:3.20.20.70 1 347 8.4E-142 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 SMART SM00917 369 500 4.0E-37 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 SUPERFAMILY SSF110921 391 499 6.8E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 PANTHER PTHR10277 1 508 2.4E-260 T 22-04-2016 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 Pfam PF00682 HMGL-like 4 273 8.1E-106 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 1.9E-35 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 2.6E-260 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APECO1_RS00410 ab388741c1c0209f0fcb6a0a52b241bf 523 SUPERFAMILY SSF51569 1 290 3.85E-97 T 22-04-2016 APECO1_RS14530 f120302507746cd4930c7234729f0693 159 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 2.0E-32 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC APECO1_RS14530 f120302507746cd4930c7234729f0693 159 PIRSF PIRSF004923 1 150 4.5E-44 T 22-04-2016 IPR026268 Protein RseC APECO1_RS14530 f120302507746cd4930c7234729f0693 159 PANTHER PTHR35867:SF1 2 153 1.4E-44 T 22-04-2016 APECO1_RS14530 f120302507746cd4930c7234729f0693 159 PANTHER PTHR35867 2 153 1.4E-44 T 22-04-2016 APECO1_RS07340 4754a1e129c4ae0b9a33e64a362cb936 212 PANTHER PTHR15020 1 201 9.4E-25 T 22-04-2016 APECO1_RS07340 4754a1e129c4ae0b9a33e64a362cb936 212 SUPERFAMILY SSF51735 1 200 1.81E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07340 4754a1e129c4ae0b9a33e64a362cb936 212 Gene3D G3DSA:3.40.50.720 1 202 2.5E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07340 4754a1e129c4ae0b9a33e64a362cb936 212 Pfam PF13460 NAD(P)H-binding 8 189 8.1E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16450 495b5d273701816f3dd95d27f38e47f2 326 SUPERFAMILY SSF101790 244 325 1.44E-25 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain APECO1_RS16450 495b5d273701816f3dd95d27f38e47f2 326 SUPERFAMILY SSF103025 6 242 1.88E-67 T 22-04-2016 APECO1_RS16450 495b5d273701816f3dd95d27f38e47f2 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 49.422 T 22-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 APECO1_RS16450 495b5d273701816f3dd95d27f38e47f2 326 PANTHER PTHR22602 1 315 2.8E-79 T 22-04-2016 APECO1_RS16450 495b5d273701816f3dd95d27f38e47f2 326 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 135 9.8E-9 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal APECO1_RS16450 495b5d273701816f3dd95d27f38e47f2 326 PANTHER PTHR22602:SF0 1 315 2.8E-79 T 22-04-2016 APECO1_RS16450 495b5d273701816f3dd95d27f38e47f2 326 Gene3D G3DSA:3.30.70.1400 27 112 2.1E-34 T 22-04-2016 APECO1_RS16450 495b5d273701816f3dd95d27f38e47f2 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 252 3.8E-26 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site APECO1_RS15165 7c9094bba578bb8f20a078e537f8fb0e 466 TIGRFAM TIGR01773 GABAperm: GABA permease 1 452 4.7E-258 T 22-04-2016 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 APECO1_RS15165 7c9094bba578bb8f20a078e537f8fb0e 466 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APECO1_RS15165 7c9094bba578bb8f20a078e537f8fb0e 466 PANTHER PTHR11785:SF24 1 466 1.9E-286 T 22-04-2016 APECO1_RS15165 7c9094bba578bb8f20a078e537f8fb0e 466 PIRSF PIRSF006060 1 463 4.4E-74 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS15165 7c9094bba578bb8f20a078e537f8fb0e 466 PANTHER PTHR11785 1 466 1.9E-286 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS15165 7c9094bba578bb8f20a078e537f8fb0e 466 Pfam PF00324 Amino acid permease 18 453 1.1E-125 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 SUPERFAMILY SSF82866 299 498 6.67E-45 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 33.725 T 22-04-2016 IPR022831 Multidrug resistance protein MdtB APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 Gene3D G3DSA:1.10.3850.10 807 1024 2.6E-56 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 4.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 4.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 4.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 4.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 4.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 4.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 4.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 4.2E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PANTHER PTHR32063:SF21 10 1039 0.0 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 SUPERFAMILY SSF82866 800 1028 1.09E-45 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 Gene3D G3DSA:3.30.2090.10 192 275 2.9E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 SUPERFAMILY SSF82693 565 661 1.55E-17 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 Gene3D G3DSA:3.30.2090.10 719 804 1.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 SUPERFAMILY SSF82714 719 800 7.59E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 Gene3D G3DSA:1.20.1640.10 294 509 1.5E-54 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 Gene3D G3DSA:3.30.70.1430 568 658 9.2E-13 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 SUPERFAMILY SSF82714 192 275 8.24E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 SUPERFAMILY SSF82693 146 191 1.7E-21 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 SUPERFAMILY SSF82693 277 333 1.7E-21 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 PANTHER PTHR32063 10 1039 0.0 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 Gene3D G3DSA:3.30.70.1430 49 151 4.9E-30 T 22-04-2016 APECO1_RS11505 dd07ea75a73fdf8926433b5473dc45af 1040 SUPERFAMILY SSF82693 49 138 1.65E-23 T 22-04-2016 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04545 Sigma-70, region 4 262 315 1.8E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 3.0E-11 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 328 40.0 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 4.4E-145 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 PANTHER PTHR30603 14 329 1.6E-210 T 22-04-2016 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 5.5E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88659 225 323 1.46E-23 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88946 56 164 2.75E-45 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.601.10 50 163 9.6E-55 T 22-04-2016 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04542 Sigma-70 region 2 94 163 3.3E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 PANTHER PTHR30603:SF15 14 329 1.6E-210 T 22-04-2016 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04539 Sigma-70 region 3 174 248 1.2E-20 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.10.10 257 322 2.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15600 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.10.10 167 216 2.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02655 7e5d9066996a49d97493e7b4966a43ff 169 Pfam PF00731 AIR carboxylase 9 157 5.3E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APECO1_RS02655 7e5d9066996a49d97493e7b4966a43ff 169 PANTHER PTHR23046:SF2 4 166 9.0E-91 T 22-04-2016 APECO1_RS02655 7e5d9066996a49d97493e7b4966a43ff 169 PIRSF PIRSF001338 5 166 1.0E-67 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 APECO1_RS02655 7e5d9066996a49d97493e7b4966a43ff 169 SUPERFAMILY SSF52255 7 165 2.62E-67 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APECO1_RS02655 7e5d9066996a49d97493e7b4966a43ff 169 Gene3D G3DSA:3.40.50.7700 4 163 3.6E-75 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APECO1_RS02655 7e5d9066996a49d97493e7b4966a43ff 169 SMART SM01001 8 159 6.2E-104 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APECO1_RS02655 7e5d9066996a49d97493e7b4966a43ff 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 2.1E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APECO1_RS02655 7e5d9066996a49d97493e7b4966a43ff 169 PANTHER PTHR23046 4 166 9.0E-91 T 22-04-2016 APECO1_RS02655 7e5d9066996a49d97493e7b4966a43ff 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.472 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APECO1_RS20055 f90d9768af1e4cbc5b1d3b6db676293c 188 PANTHER PTHR37530 1 184 7.1E-70 T 22-04-2016 APECO1_RS20055 f90d9768af1e4cbc5b1d3b6db676293c 188 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 2 183 6.0E-91 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APECO1_RS20055 f90d9768af1e4cbc5b1d3b6db676293c 188 Pfam PF03843 Outer membrane lipoprotein Slp family 16 165 6.6E-44 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APECO1_RS20055 f90d9768af1e4cbc5b1d3b6db676293c 188 PIRSF PIRSF004982 1 184 3.5E-56 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APECO1_RS19125 b57d5e0892991aac027dae3bf8dcf13a 131 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19125 b57d5e0892991aac027dae3bf8dcf13a 131 Gene3D G3DSA:3.30.1300.30 34 116 3.3E-14 T 22-04-2016 APECO1_RS19125 b57d5e0892991aac027dae3bf8dcf13a 131 Pfam PF02501 Type II secretion system (T2SS), protein I 40 119 3.0E-11 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 APECO1_RS19125 b57d5e0892991aac027dae3bf8dcf13a 131 PANTHER PTHR38779 1 126 6.4E-47 T 22-04-2016 APECO1_RS19125 b57d5e0892991aac027dae3bf8dcf13a 131 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 109 3.0E-35 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 APECO1_RS19125 b57d5e0892991aac027dae3bf8dcf13a 131 SUPERFAMILY SSF54523 38 116 2.46E-11 T 22-04-2016 APECO1_RS19125 b57d5e0892991aac027dae3bf8dcf13a 131 PANTHER PTHR38779:SF2 1 126 6.4E-47 T 22-04-2016 APECO1_RS19125 b57d5e0892991aac027dae3bf8dcf13a 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.7E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19125 b57d5e0892991aac027dae3bf8dcf13a 131 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 5.7E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 Pfam PF00005 ABC transporter 336 467 4.9E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 Pfam PF00005 ABC transporter 18 184 1.9E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 SMART SM00382 26 228 7.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 SMART SM00382 344 521 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 SUPERFAMILY SSF52540 298 523 1.56E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 Gene3D G3DSA:3.40.50.300 5 100 5.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 Gene3D G3DSA:3.40.50.300 132 280 5.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 PANTHER PTHR19211 2 526 0.0 T 22-04-2016 APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 Gene3D G3DSA:3.40.50.300 318 528 1.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 Pfam PF12848 ABC transporter 224 309 5.2E-21 T 22-04-2016 IPR032781 ABC-transporter extension domain APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 PANTHER PTHR19211:SF38 2 526 0.0 T 22-04-2016 APECO1_RS03985 a4a654b4e89c024c3efdd151385ebf54 530 SUPERFAMILY SSF52540 6 237 6.73E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 Pfam PF02321 Outer membrane efflux protein 295 476 1.3E-10 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 Pfam PF02321 Outer membrane efflux protein 69 268 7.8E-9 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 PANTHER PTHR30203 1 483 1.8E-220 T 22-04-2016 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 PANTHER PTHR30203:SF6 1 483 1.8E-220 T 22-04-2016 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 SUPERFAMILY SSF56954 7 481 3.79E-71 T 22-04-2016 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 478 5.4E-81 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 Gene3D G3DSA:2.20.200.10 108 155 5.5E-14 T 22-04-2016 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 Gene3D G3DSA:2.20.200.10 328 363 5.5E-14 T 22-04-2016 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 Gene3D G3DSA:1.20.1600.10 55 95 1.1E-66 T 22-04-2016 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 Gene3D G3DSA:1.20.1600.10 156 327 1.1E-66 T 22-04-2016 APECO1_RS23370 dd69b56512cf74e4fecfcdf7fa0d81dc 488 Gene3D G3DSA:1.20.1600.10 365 478 1.1E-66 T 22-04-2016 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 PIRSF PIRSF500176 2 332 1.6E-120 T 22-04-2016 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 SMART SM00870 5 323 2.6E-142 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 Gene3D G3DSA:3.40.50.1170 5 197 4.8E-79 T 22-04-2016 IPR027474 L-asparaginase, N-terminal APECO1_RS09470 037b651c390f244119e43bb817bab026 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 PIRSF PIRSF001220 1 334 7.7E-98 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.1E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 4.1E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.1E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 Gene3D G3DSA:3.40.50.40 211 336 8.3E-52 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain APECO1_RS09470 037b651c390f244119e43bb817bab026 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 PANTHER PTHR11707:SF31 1 338 4.6E-267 T 22-04-2016 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.1E-66 T 22-04-2016 IPR027474 L-asparaginase, N-terminal APECO1_RS09470 037b651c390f244119e43bb817bab026 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 1.4E-143 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 SUPERFAMILY SSF53774 3 335 1.57E-114 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APECO1_RS09470 037b651c390f244119e43bb817bab026 338 PANTHER PTHR11707 1 338 4.6E-267 T 22-04-2016 APECO1_RS19535 fc45ab32822cf6d6aa81bfa278b69369 438 Pfam PF02447 GntP family permease 1 437 3.2E-188 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS19535 fc45ab32822cf6d6aa81bfa278b69369 438 PIRSF PIRSF002746 1 438 5.0E-160 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS19535 fc45ab32822cf6d6aa81bfa278b69369 438 PANTHER PTHR30354:SF4 1 438 0.0 T 22-04-2016 APECO1_RS19535 fc45ab32822cf6d6aa81bfa278b69369 438 PANTHER PTHR30354 1 438 0.0 T 22-04-2016 APECO1_RS19535 fc45ab32822cf6d6aa81bfa278b69369 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 7.4E-204 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 PIRSF PIRSF000139 5 407 1.0E-143 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 Pfam PF13183 4Fe-4S dicluster domain 22 89 2.3E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 Gene3D G3DSA:1.10.1060.10 8 106 2.3E-22 T 22-04-2016 APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 PANTHER PTHR32479 14 405 9.5E-139 T 22-04-2016 APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 PANTHER PTHR32479:SF2 14 405 9.5E-139 T 22-04-2016 APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 Pfam PF02754 Cysteine-rich domain 303 385 2.9E-13 T 22-04-2016 IPR004017 Cysteine-rich domain APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 Pfam PF02754 Cysteine-rich domain 170 255 5.4E-13 T 22-04-2016 IPR004017 Cysteine-rich domain APECO1_RS17280 55ec702832eb745ec2d750452b6cfd74 407 SUPERFAMILY SSF54862 14 125 5.44E-21 T 22-04-2016 APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 PANTHER PTHR18966 20 243 4.5E-173 T 22-04-2016 APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 SMART SM00079 22 243 3.9E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 SUPERFAMILY SSF53850 1 242 1.87E-71 T 22-04-2016 APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 Gene3D G3DSA:3.40.190.10 110 201 4.3E-28 T 22-04-2016 APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 2 241 1.0E-92 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 9.9E-67 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 PANTHER PTHR18966:SF194 20 243 4.5E-173 T 22-04-2016 APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 SMART SM00062 22 243 1.6E-85 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 Gene3D G3DSA:3.40.190.10 203 242 9.3E-45 T 22-04-2016 APECO1_RS04200 aae8cb6468b1ea81de275d5cf7823337 243 Gene3D G3DSA:3.40.190.10 20 108 9.3E-45 T 22-04-2016 APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 SMART SM00345 13 72 2.0E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 PANTHER PTHR11751:SF421 1 110 6.5E-47 T 22-04-2016 APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 SUPERFAMILY SSF46785 8 76 3.13E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 SMART SM00895 94 224 2.5E-19 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 Gene3D G3DSA:1.20.120.530 92 235 2.2E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 Gene3D G3DSA:1.10.10.10 7 74 3.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 PANTHER PTHR11751 1 110 6.5E-47 T 22-04-2016 APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 SUPERFAMILY SSF48008 93 232 1.18E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 Pfam PF07729 FCD domain 94 223 1.4E-19 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.2E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.2E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS17510 3a4cad9ed4f99a92eeb19f92fd912ba7 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 9.3E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 SUPERFAMILY SSF48179 283 484 6.12E-68 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 SUPERFAMILY SSF51735 10 281 2.87E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 1.9E-20 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 1.9E-20 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 PRINTS PR00084 Mannitol dehydrogenase signature 25 35 1.9E-20 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 1.9E-20 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 24 188 7.1E-54 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 Gene3D G3DSA:3.40.50.720 10 281 1.4E-111 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 PANTHER PTHR30562:SF6 7 486 1.2E-271 T 22-04-2016 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 PANTHER PTHR30562 7 486 1.2E-271 T 22-04-2016 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 463 1.5E-101 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APECO1_RS24880 8e3c465c5c81a989472af68b3647e7b1 486 Gene3D G3DSA:1.10.1040.10 283 485 6.9E-77 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS18955 b3f2d60e9479262be013fc0afb0be596 129 Gene3D G3DSA:3.30.420.80 9 129 1.4E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APECO1_RS18955 b3f2d60e9479262be013fc0afb0be596 129 PANTHER PTHR11759 11 129 5.7E-74 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APECO1_RS18955 b3f2d60e9479262be013fc0afb0be596 129 SUPERFAMILY SSF53137 14 129 6.08E-48 T 22-04-2016 APECO1_RS18955 b3f2d60e9479262be013fc0afb0be596 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.678 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APECO1_RS18955 b3f2d60e9479262be013fc0afb0be596 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site APECO1_RS18955 b3f2d60e9479262be013fc0afb0be596 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.0E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18955 b3f2d60e9479262be013fc0afb0be596 129 PIRSF PIRSF002131 1 129 5.9E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APECO1_RS18955 b3f2d60e9479262be013fc0afb0be596 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 PANTHER PTHR11364:SF0 1 278 4.4E-113 T 22-04-2016 APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 Pfam PF00581 Rhodanese-like domain 9 128 1.8E-18 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 Pfam PF00581 Rhodanese-like domain 165 270 2.6E-13 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 Gene3D G3DSA:3.40.250.10 1 151 1.7E-47 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 Gene3D G3DSA:3.40.250.10 152 278 1.7E-41 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 SUPERFAMILY SSF52821 165 278 7.2E-33 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 SMART SM00450 155 275 1.4E-24 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 SMART SM00450 7 132 9.3E-28 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 PANTHER PTHR11364 1 278 4.4E-113 T 22-04-2016 APECO1_RS14305 be2ee238dd2f502f2e00710d1740f9bc 281 SUPERFAMILY SSF52821 1 152 1.57E-41 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 PANTHER PTHR26402 2 217 2.1E-116 T 22-04-2016 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 Gene3D G3DSA:3.40.50.2300 2 119 5.9E-35 T 22-04-2016 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.9E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 SMART SM00421 147 204 2.4E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 SMART SM00448 2 115 1.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 PANTHER PTHR26402:SF506 2 217 2.1E-116 T 22-04-2016 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 SUPERFAMILY SSF46894 147 210 2.55E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 SUPERFAMILY SSF52172 3 161 1.46E-33 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 Gene3D G3DSA:1.10.10.10 120 211 2.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10220 eaebdbe1327c32fdcb12b491aa908681 218 Pfam PF00072 Response regulator receiver domain 4 115 9.5E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS09380 fa6b533e8a48e8a5750bd1c5a587ddaa 236 PANTHER PTHR12677 1 211 9.3E-49 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 APECO1_RS09380 fa6b533e8a48e8a5750bd1c5a587ddaa 236 Pfam PF09335 SNARE associated Golgi protein 63 179 2.5E-27 T 22-04-2016 IPR032816 SNARE associated Golgi protein APECO1_RS09380 fa6b533e8a48e8a5750bd1c5a587ddaa 236 PANTHER PTHR12677:SF5 1 211 9.3E-49 T 22-04-2016 APECO1_RS03980 72687302febc400acb6aaa54e09d2bef 306 PANTHER PTHR30582:SF8 35 306 1.2E-227 T 22-04-2016 APECO1_RS03980 72687302febc400acb6aaa54e09d2bef 306 Gene3D G3DSA:2.40.440.10 93 233 2.0E-33 T 22-04-2016 APECO1_RS03980 72687302febc400acb6aaa54e09d2bef 306 Pfam PF03734 L,D-transpeptidase catalytic domain 101 231 3.1E-17 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APECO1_RS03980 72687302febc400acb6aaa54e09d2bef 306 SUPERFAMILY SSF141523 177 233 5.1E-26 T 22-04-2016 APECO1_RS03980 72687302febc400acb6aaa54e09d2bef 306 SUPERFAMILY SSF141523 99 149 5.1E-26 T 22-04-2016 APECO1_RS03980 72687302febc400acb6aaa54e09d2bef 306 PANTHER PTHR30582 35 306 1.2E-227 T 22-04-2016 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 SUPERFAMILY SSF52540 72 152 2.52E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 SUPERFAMILY SSF52540 188 372 2.52E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Pfam PF12631 MnmE helical domain 123 451 5.0E-61 T 22-04-2016 IPR025867 MnmE, helical domain APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 PANTHER PTHR11649:SF56 8 454 5.8E-181 T 22-04-2016 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.378 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 6.4E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Pfam PF01926 50S ribosome-binding GTPase 218 336 7.7E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 3.9E-34 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Gene3D G3DSA:3.40.50.300 286 376 1.3E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Gene3D G3DSA:3.30.1360.120 1 121 2.0E-42 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Gene3D G3DSA:1.20.120.430 384 454 9.2E-60 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Gene3D G3DSA:1.20.120.430 248 271 9.2E-60 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Gene3D G3DSA:1.20.120.430 122 182 9.2E-60 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 2.2E-101 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 SUPERFAMILY SSF116878 379 454 1.96E-51 T 22-04-2016 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 SUPERFAMILY SSF116878 121 220 1.96E-51 T 22-04-2016 APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 Gene3D G3DSA:3.40.50.300 202 247 3.8E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21175 0c87f9c28ab6b25b0d839d1c4ee8c15d 454 PANTHER PTHR11649 8 454 5.8E-181 T 22-04-2016 APECO1_RS10280 768c50eb41fa8ba12a2da39039b2689f 136 Pfam PF02561 Flagellar protein FliS 8 124 2.6E-34 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APECO1_RS10280 768c50eb41fa8ba12a2da39039b2689f 136 Gene3D G3DSA:1.20.120.340 8 124 5.0E-38 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APECO1_RS10280 768c50eb41fa8ba12a2da39039b2689f 136 PANTHER PTHR34773 1 124 4.7E-45 T 22-04-2016 APECO1_RS10280 768c50eb41fa8ba12a2da39039b2689f 136 SUPERFAMILY SSF101116 8 124 5.49E-34 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APECO1_RS10280 768c50eb41fa8ba12a2da39039b2689f 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 129 8.6E-59 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APECO1_RS10280 768c50eb41fa8ba12a2da39039b2689f 136 PIRSF PIRSF039090 1 135 2.3E-44 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APECO1_RS10125 ba662a8d1b1fb641f93354712e1e8122 142 SUPERFAMILY SSF52402 3 138 5.27E-25 T 22-04-2016 APECO1_RS10125 ba662a8d1b1fb641f93354712e1e8122 142 PIRSF PIRSF006276 1 141 7.4E-45 T 22-04-2016 IPR006015 Universal stress protein A APECO1_RS10125 ba662a8d1b1fb641f93354712e1e8122 142 Gene3D G3DSA:3.40.50.620 3 138 1.8E-25 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS10125 ba662a8d1b1fb641f93354712e1e8122 142 Pfam PF00582 Universal stress protein family 3 138 4.7E-16 T 22-04-2016 IPR006016 UspA GO:0006950 APECO1_RS01100 a883a058ed9160569ff9f9f431d5a057 266 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 54.24 T 22-04-2016 IPR022958 Uncharacterised protein family UPF0294 APECO1_RS01100 a883a058ed9160569ff9f9f431d5a057 266 SUPERFAMILY SSF56219 44 260 1.96E-26 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS01100 a883a058ed9160569ff9f9f431d5a057 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 252 3.4E-9 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS01100 a883a058ed9160569ff9f9f431d5a057 266 Gene3D G3DSA:3.60.10.10 39 233 5.7E-7 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS04610 edf9e0457ba2158dc8434d7f9d932f40 159 Pfam PF06995 Phage P2 GpU 6 125 1.9E-44 T 22-04-2016 IPR009734 Myoviridae, GpU APECO1_RS04610 edf9e0457ba2158dc8434d7f9d932f40 159 PIRSF PIRSF029208 1 154 6.3E-63 T 22-04-2016 IPR016912 Bacteriophage P2, GpU APECO1_RS12560 c35ecb25a63b9e897f234639458c342d 379 SUPERFAMILY SSF53383 4 376 1.73E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS12560 c35ecb25a63b9e897f234639458c342d 379 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 69.984 T 22-04-2016 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87|UniPathway: UPA00030|UniPathway: UPA00032 APECO1_RS12560 c35ecb25a63b9e897f234639458c342d 379 PANTHER PTHR30244 4 379 5.8E-164 T 22-04-2016 APECO1_RS12560 c35ecb25a63b9e897f234639458c342d 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 373 2.5E-137 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APECO1_RS12560 c35ecb25a63b9e897f234639458c342d 379 PIRSF PIRSF000390 1 379 7.3E-115 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APECO1_RS12560 c35ecb25a63b9e897f234639458c342d 379 Gene3D G3DSA:3.90.1150.10 253 378 9.6E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS12560 c35ecb25a63b9e897f234639458c342d 379 Gene3D G3DSA:3.40.640.10 4 250 3.4E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS12560 c35ecb25a63b9e897f234639458c342d 379 PANTHER PTHR30244:SF3 4 379 5.8E-164 T 22-04-2016 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.158 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 SMART SM00411 3 92 1.2E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 PANTHER PTHR33175 2 99 7.3E-58 T 22-04-2016 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.6E-55 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 Gene3D G3DSA:4.10.520.10 2 93 3.4E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 SUPERFAMILY SSF47729 3 93 1.16E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.7E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 PANTHER PTHR33175:SF2 2 99 7.3E-58 T 22-04-2016 APECO1_RS09190 59ec5d46b9f3ed5fc9297c10221bdeba 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 PANTHER PTHR35037:SF2 483 765 3.9E-16 T 22-04-2016 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 Gene3D G3DSA:2.40.128.130 470 765 1.7E-71 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 PRINTS PR01484 Pertactin virulence factor family signature 636 653 8.3E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 PRINTS PR01484 Pertactin virulence factor family signature 544 568 8.3E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 PRINTS PR01484 Pertactin virulence factor family signature 720 745 8.3E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 PRINTS PR01484 Pertactin virulence factor family signature 745 765 8.3E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 PRINTS PR01484 Pertactin virulence factor family signature 503 523 8.3E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 PRINTS PR01484 Pertactin virulence factor family signature 682 703 8.3E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 SMART SM00869 503 754 1.7E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 Pfam PF03797 Autotransporter beta-domain 501 749 3.4E-46 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 Gene3D G3DSA:2.160.20.20 28 457 4.4E-16 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 SUPERFAMILY SSF51126 91 458 3.77E-17 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 PANTHER PTHR35037 483 765 3.9E-16 T 22-04-2016 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 366 765 6.2E-70 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APECO1_RS01640 2fb4294f8fd70b53b9529283e2b5e191 765 SUPERFAMILY SSF103515 472 765 1.96E-52 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS17240 e76619d94e271e399f4ceb08482679dc 319 Pfam PF11356 Type II secretion system protein C 46 185 9.6E-28 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal APECO1_RS17240 e76619d94e271e399f4ceb08482679dc 319 SUPERFAMILY SSF50156 223 317 1.13E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS17240 e76619d94e271e399f4ceb08482679dc 319 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 43 317 5.1E-43 T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 APECO1_RS17240 e76619d94e271e399f4ceb08482679dc 319 Gene3D G3DSA:2.30.42.10 247 316 4.5E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS17240 e76619d94e271e399f4ceb08482679dc 319 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 256 282 - T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 APECO1_RS20485 59601473c72ce7f543fc64ccb011c3a1 157 PANTHER PTHR11938:SF111 1 145 3.5E-80 T 22-04-2016 APECO1_RS20485 59601473c72ce7f543fc64ccb011c3a1 157 Gene3D G3DSA:3.30.70.20 64 95 2.4E-14 T 22-04-2016 APECO1_RS20485 59601473c72ce7f543fc64ccb011c3a1 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS20485 59601473c72ce7f543fc64ccb011c3a1 157 PANTHER PTHR11938 1 145 3.5E-80 T 22-04-2016 APECO1_RS20485 59601473c72ce7f543fc64ccb011c3a1 157 Pfam PF13247 4Fe-4S dicluster domain 54 142 9.5E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS20485 59601473c72ce7f543fc64ccb011c3a1 157 Gene3D G3DSA:3.30.70.20 96 150 1.6E-16 T 22-04-2016 APECO1_RS20485 59601473c72ce7f543fc64ccb011c3a1 157 Gene3D G3DSA:3.30.70.20 4 63 6.0E-10 T 22-04-2016 APECO1_RS20485 59601473c72ce7f543fc64ccb011c3a1 157 SUPERFAMILY SSF54862 1 145 2.51E-42 T 22-04-2016 APECO1_RS08155 748f52a4f2d59998f78315e9bc2457e0 195 Gene3D G3DSA:3.40.50.740 109 184 5.2E-17 T 22-04-2016 APECO1_RS08155 748f52a4f2d59998f78315e9bc2457e0 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APECO1_RS08155 748f52a4f2d59998f78315e9bc2457e0 195 PANTHER PTHR11615 41 195 8.3E-105 T 22-04-2016 APECO1_RS08155 748f52a4f2d59998f78315e9bc2457e0 195 Pfam PF00384 Molybdopterin oxidoreductase 107 139 3.4E-6 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS08155 748f52a4f2d59998f78315e9bc2457e0 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 104 3.2E-20 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS08155 748f52a4f2d59998f78315e9bc2457e0 195 SMART SM00926 43 104 1.6E-22 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APECO1_RS08155 748f52a4f2d59998f78315e9bc2457e0 195 Gene3D G3DSA:2.20.25.90 37 108 1.2E-24 T 22-04-2016 APECO1_RS08155 748f52a4f2d59998f78315e9bc2457e0 195 PANTHER PTHR11615:SF149 41 195 8.3E-105 T 22-04-2016 APECO1_RS08155 748f52a4f2d59998f78315e9bc2457e0 195 SUPERFAMILY SSF53706 36 195 4.06E-56 T 22-04-2016 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 Gene3D G3DSA:1.10.10.10 1 82 3.2E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.4E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 Pfam PF03466 LysR substrate binding domain 88 296 3.4E-46 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 PANTHER PTHR30346:SF7 1 292 2.7E-140 T 22-04-2016 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 Gene3D G3DSA:3.40.190.10 178 270 2.4E-31 T 22-04-2016 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.3E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.3E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.3E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 SUPERFAMILY SSF53850 89 296 7.48E-41 T 22-04-2016 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 Gene3D G3DSA:3.40.190.10 90 177 7.1E-28 T 22-04-2016 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 PANTHER PTHR30346 1 292 2.7E-140 T 22-04-2016 APECO1_RS08565 6a39854815259d467660d5659d1d563f 297 SUPERFAMILY SSF46785 4 89 5.37E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS23080 854846b23df2b5ff07dec70f68bdcf5b 441 PANTHER PTHR11206:SF94 8 435 6.6E-145 T 22-04-2016 APECO1_RS23080 854846b23df2b5ff07dec70f68bdcf5b 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 410 9.3E-104 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS23080 854846b23df2b5ff07dec70f68bdcf5b 441 Pfam PF01554 MatE 241 394 1.3E-10 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS23080 854846b23df2b5ff07dec70f68bdcf5b 441 Pfam PF01554 MatE 17 178 8.8E-35 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS23080 854846b23df2b5ff07dec70f68bdcf5b 441 PANTHER PTHR11206 8 435 6.6E-145 T 22-04-2016 APECO1_RS18525 c73a5224fcc4ad2145ced72152fbf0c9 291 PANTHER PTHR18964 1 291 2.3E-166 T 22-04-2016 APECO1_RS18525 c73a5224fcc4ad2145ced72152fbf0c9 291 Pfam PF00480 ROK family 4 288 3.3E-92 T 22-04-2016 IPR000600 ROK family APECO1_RS18525 c73a5224fcc4ad2145ced72152fbf0c9 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 22-04-2016 IPR000600 ROK family APECO1_RS18525 c73a5224fcc4ad2145ced72152fbf0c9 291 PANTHER PTHR18964:SF140 1 291 2.3E-166 T 22-04-2016 APECO1_RS18525 c73a5224fcc4ad2145ced72152fbf0c9 291 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 290 48.951 T 22-04-2016 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138|UniPathway: UPA00629 APECO1_RS18525 c73a5224fcc4ad2145ced72152fbf0c9 291 Gene3D G3DSA:3.30.420.40 2 133 4.9E-33 T 22-04-2016 APECO1_RS18525 c73a5224fcc4ad2145ced72152fbf0c9 291 SUPERFAMILY SSF53067 1 287 1.45E-55 T 22-04-2016 APECO1_RS18525 c73a5224fcc4ad2145ced72152fbf0c9 291 Gene3D G3DSA:3.30.420.40 134 260 1.4E-41 T 22-04-2016 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 SUPERFAMILY SSF116726 231 292 2.62E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 PANTHER PTHR10283:SF12 244 268 1.9E-246 T 22-04-2016 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 PANTHER PTHR10283:SF12 2 225 1.9E-246 T 22-04-2016 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 PANTHER PTHR10283:SF12 302 353 1.9E-246 T 22-04-2016 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 PANTHER PTHR10283:SF12 448 610 1.9E-246 T 22-04-2016 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 PANTHER PTHR10283 244 268 1.9E-246 T 22-04-2016 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 PANTHER PTHR10283 2 225 1.9E-246 T 22-04-2016 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 PANTHER PTHR10283 302 353 1.9E-246 T 22-04-2016 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 PANTHER PTHR10283 448 610 1.9E-246 T 22-04-2016 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 Gene3D G3DSA:3.30.70.1450 322 395 3.5E-20 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 Gene3D G3DSA:3.30.70.1450 232 311 7.4E-17 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 SUPERFAMILY SSF116726 321 391 7.19E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 Pfam PF02080 TrkA-C domain 231 304 6.5E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 Pfam PF02080 TrkA-C domain 326 390 1.3E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 Pfam PF03600 Citrate transporter 16 197 8.8E-36 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APECO1_RS12740 22ba4674fa614ae3ba2cdbee95c8a3fd 610 Pfam PF03600 Citrate transporter 430 608 2.5E-19 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APECO1_RS21835 9c78415eff7c4205bc79fd32f8920272 301 Gene3D G3DSA:1.10.10.10 7 82 1.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21835 9c78415eff7c4205bc79fd32f8920272 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.6E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21835 9c78415eff7c4205bc79fd32f8920272 301 SUPERFAMILY SSF46785 4 81 8.71E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21835 9c78415eff7c4205bc79fd32f8920272 301 Pfam PF03466 LysR substrate binding domain 89 290 6.7E-25 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS21835 9c78415eff7c4205bc79fd32f8920272 301 SUPERFAMILY SSF53850 89 291 1.68E-27 T 22-04-2016 APECO1_RS21835 9c78415eff7c4205bc79fd32f8920272 301 Gene3D G3DSA:3.40.190.10 186 261 1.8E-4 T 22-04-2016 APECO1_RS21835 9c78415eff7c4205bc79fd32f8920272 301 Gene3D G3DSA:3.40.190.10 95 185 1.1E-5 T 22-04-2016 APECO1_RS21835 9c78415eff7c4205bc79fd32f8920272 301 PANTHER PTHR30126:SF18 3 291 1.2E-83 T 22-04-2016 APECO1_RS21835 9c78415eff7c4205bc79fd32f8920272 301 PANTHER PTHR30126 3 291 1.2E-83 T 22-04-2016 APECO1_RS20700 6bf433ad824e5710e9d9ba7cae74ff7a 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 9.8E-47 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APECO1_RS20700 6bf433ad824e5710e9d9ba7cae74ff7a 310 PANTHER PTHR10366 1 308 1.3E-125 T 22-04-2016 APECO1_RS20700 6bf433ad824e5710e9d9ba7cae74ff7a 310 SUPERFAMILY SSF51735 1 306 3.69E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20700 6bf433ad824e5710e9d9ba7cae74ff7a 310 PANTHER PTHR10366:SF469 1 308 1.3E-125 T 22-04-2016 APECO1_RS20700 6bf433ad824e5710e9d9ba7cae74ff7a 310 Gene3D G3DSA:3.40.50.720 2 171 1.7E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20700 6bf433ad824e5710e9d9ba7cae74ff7a 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 5.0E-138 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 APECO1_RS20700 6bf433ad824e5710e9d9ba7cae74ff7a 310 Gene3D G3DSA:3.90.25.10 172 291 5.3E-37 T 22-04-2016 APECO1_RS20700 6bf433ad824e5710e9d9ba7cae74ff7a 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 58.71 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 6.2E-32 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.596 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 SUPERFAMILY SSF50486 208 309 3.3E-37 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Gene3D G3DSA:3.40.50.170 4 208 6.1E-75 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Pfam PF00551 Formyl transferase 6 183 2.3E-55 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 3.9E-125 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 Gene3D G3DSA:3.10.25.10 210 306 4.0E-38 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 SUPERFAMILY SSF53328 5 207 7.33E-68 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 PANTHER PTHR11138 5 307 9.1E-126 T 22-04-2016 APECO1_RS18905 4fa02bcb35f8cd3289d05cfb2ac78f2c 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS02860 e8cfad378685e4560076ed24b3d369f6 271 Gene3D G3DSA:3.40.50.300 8 241 7.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02860 e8cfad378685e4560076ed24b3d369f6 271 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS02860 e8cfad378685e4560076ed24b3d369f6 271 Pfam PF00005 ABC transporter 24 171 4.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS02860 e8cfad378685e4560076ed24b3d369f6 271 SUPERFAMILY SSF52540 8 233 1.36E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02860 e8cfad378685e4560076ed24b3d369f6 271 SMART SM00382 32 229 7.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS02860 e8cfad378685e4560076ed24b3d369f6 271 PANTHER PTHR24220 9 271 3.8E-166 T 22-04-2016 APECO1_RS02860 e8cfad378685e4560076ed24b3d369f6 271 PANTHER PTHR24220:SF438 9 271 3.8E-166 T 22-04-2016 APECO1_RS23620 c829b9724af43c60b70e0f10795110ed 90 PANTHER PTHR31435:SF3 1 89 8.6E-25 T 22-04-2016 APECO1_RS23620 c829b9724af43c60b70e0f10795110ed 90 Gene3D G3DSA:3.40.630.30 1 89 2.6E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS23620 c829b9724af43c60b70e0f10795110ed 90 SUPERFAMILY SSF55729 2 88 4.58E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS23620 c829b9724af43c60b70e0f10795110ed 90 PANTHER PTHR31435 1 89 8.6E-25 T 22-04-2016 APECO1_RS23620 c829b9724af43c60b70e0f10795110ed 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 88 1.1E-21 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 Gene3D G3DSA:3.30.360.10 159 314 1.4E-87 T 22-04-2016 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 1.7E-59 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.6E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 7.6E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 7.6E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 7.6E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 7.6E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.1E-72 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 SUPERFAMILY SSF55347 149 312 2.43E-82 T 22-04-2016 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 SUPERFAMILY SSF51735 3 166 1.04E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 PIRSF PIRSF000149 1 331 7.9E-137 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 SMART SM00846 3 150 4.8E-95 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.8E-134 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 PANTHER PTHR10836 1 331 1.2E-249 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APECO1_RS09530 adec9c8c296a076912033969d932bc85 331 Gene3D G3DSA:3.40.50.720 1 158 5.1E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS05970 c8c5288cf48c80a129ac8fa3b1914057 642 PANTHER PTHR34413 1 641 3.2E-297 T 22-04-2016 APECO1_RS05970 c8c5288cf48c80a129ac8fa3b1914057 642 PANTHER PTHR34413:SF2 1 641 3.2E-297 T 22-04-2016 APECO1_RS05970 c8c5288cf48c80a129ac8fa3b1914057 642 Pfam PF05876 Phage terminase large subunit (GpA) 39 601 1.2E-160 T 22-04-2016 IPR008866 Bacteriophage lambda, GpA APECO1_RS21020 aa36127220b22371712e3e38926e4ab6 394 Gene3D G3DSA:1.20.1250.20 10 191 3.1E-29 T 22-04-2016 APECO1_RS21020 aa36127220b22371712e3e38926e4ab6 394 SUPERFAMILY SSF103473 4 388 6.67E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS21020 aa36127220b22371712e3e38926e4ab6 394 Gene3D G3DSA:1.20.1250.20 234 384 2.7E-4 T 22-04-2016 APECO1_RS21020 aa36127220b22371712e3e38926e4ab6 394 Pfam PF07690 Major Facilitator Superfamily 14 349 4.5E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS21020 aa36127220b22371712e3e38926e4ab6 394 PANTHER PTHR23502 1 387 2.9E-245 T 22-04-2016 APECO1_RS21020 aa36127220b22371712e3e38926e4ab6 394 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 50 186 1.1E-39 T 22-04-2016 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 APECO1_RS21020 aa36127220b22371712e3e38926e4ab6 394 PANTHER PTHR23502:SF32 1 387 2.9E-245 T 22-04-2016 APECO1_RS04720 3c613cad0e6152bbcccc71ae2e7b1dae 440 SUPERFAMILY SSF140570 119 281 1.23E-77 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain APECO1_RS04720 3c613cad0e6152bbcccc71ae2e7b1dae 440 Pfam PF17192 MukF middle domain 121 281 4.4E-85 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain APECO1_RS04720 3c613cad0e6152bbcccc71ae2e7b1dae 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 57.981 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 APECO1_RS04720 3c613cad0e6152bbcccc71ae2e7b1dae 440 Pfam PF03882 MukF winged-helix domain 3 117 8.1E-58 T 22-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain APECO1_RS04720 3c613cad0e6152bbcccc71ae2e7b1dae 440 PIRSF PIRSF018282 1 440 3.5E-245 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 APECO1_RS04720 3c613cad0e6152bbcccc71ae2e7b1dae 440 SUPERFAMILY SSF46785 8 118 1.83E-48 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04720 3c613cad0e6152bbcccc71ae2e7b1dae 440 Gene3D G3DSA:1.10.10.10 24 118 4.7E-49 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04720 3c613cad0e6152bbcccc71ae2e7b1dae 440 Pfam PF17193 MukF C-terminal domain 283 440 5.0E-81 T 22-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 6.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 6.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 461 6.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 6.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 SUPERFAMILY SSF55052 158 222 2.41E-17 T 22-04-2016 IPR015162 CheY binding APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Pfam PF01627 Hpt domain 6 104 4.7E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Gene3D G3DSA:3.30.70.400 154 225 2.9E-30 T 22-04-2016 IPR015162 CheY binding APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Gene3D G3DSA:3.30.565.10 324 506 5.9E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Gene3D G3DSA:2.40.50.180 531 594 3.2E-15 T 22-04-2016 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Pfam PF01584 CheW-like domain 512 638 4.0E-27 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 SUPERFAMILY SSF50341 506 638 1.96E-31 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 SMART SM00387 367 507 6.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 PANTHER PTHR22617:SF20 1 638 0.0 T 22-04-2016 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 SMART SM00073 3 100 3.4E-35 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 SMART SM01231 259 322 2.7E-21 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 506 2.6E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 SUPERFAMILY SSF47384 260 323 4.71E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 SUPERFAMILY SSF55874 325 505 1.83E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Gene3D G3DSA:1.20.120.160 2 135 7.2E-43 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 SUPERFAMILY SSF47226 3 124 3.77E-33 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Gene3D G3DSA:2.30.30.40 507 528 7.9E-25 T 22-04-2016 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Gene3D G3DSA:2.30.30.40 595 638 7.9E-25 T 22-04-2016 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 SMART SM00260 499 639 2.9E-46 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 PANTHER PTHR22617 1 638 0.0 T 22-04-2016 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Pfam PF09078 CheY binding 159 221 9.4E-18 T 22-04-2016 IPR015162 CheY binding APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Gene3D G3DSA:1.10.287.560 260 323 3.6E-23 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APECO1_RS10100 a5f23950657fdd6c12cd3437c032b381 652 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 260 322 1.2E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 PANTHER PTHR10851 1 218 4.9E-112 T 22-04-2016 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.617 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 Gene3D G3DSA:2.30.110.10 22 218 6.6E-84 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 SUPERFAMILY SSF50475 21 218 1.16E-66 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 122 1.0E-23 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 PANTHER PTHR10851:SF0 1 218 4.9E-112 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 218 1.7E-104 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 PIRSF PIRSF000190 1 218 6.3E-86 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS08795 8b0b3c1f7ff8a0f6f837d8ee3c5fb4b4 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 7.5E-19 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS02250 5f1ca4d3d962e7551947c647f392f2af 123 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 55 123 3.2E-38 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain APECO1_RS02250 5f1ca4d3d962e7551947c647f392f2af 123 SMART SM00278 71 90 80.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS02250 5f1ca4d3d962e7551947c647f392f2af 123 SMART SM00278 101 120 5.6 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APECO1_RS02250 5f1ca4d3d962e7551947c647f392f2af 123 PANTHER PTHR21180 20 123 3.6E-29 T 22-04-2016 APECO1_RS02250 5f1ca4d3d962e7551947c647f392f2af 123 Pfam PF12836 Helix-hairpin-helix motif 60 118 3.6E-19 T 22-04-2016 APECO1_RS02250 5f1ca4d3d962e7551947c647f392f2af 123 Gene3D G3DSA:1.10.150.280 33 116 6.6E-17 T 22-04-2016 APECO1_RS02250 5f1ca4d3d962e7551947c647f392f2af 123 SUPERFAMILY SSF47781 44 119 9.0E-24 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 PANTHER PTHR18968 2 574 0.0 T 22-04-2016 APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 3.4E-45 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 Gene3D G3DSA:3.40.50.970 358 558 1.5E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 SUPERFAMILY SSF52467 189 362 1.36E-62 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 Gene3D G3DSA:3.40.50.970 2 173 8.6E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 Gene3D G3DSA:3.40.50.1220 190 357 5.5E-68 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 6.3E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 SUPERFAMILY SSF52518 2 179 9.51E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 1.6E-49 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 6.3E-284 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 PANTHER PTHR18968:SF116 2 574 0.0 T 22-04-2016 APECO1_RS00425 a836e0c3af12bf92547a0ef3922696b2 574 SUPERFAMILY SSF52518 371 567 1.73E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS07970 63e0bef9868b7fad4254e4b5af8f4326 178 SUPERFAMILY SSF47413 4 71 1.39E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS07970 63e0bef9868b7fad4254e4b5af8f4326 178 SMART SM00530 11 66 1.2E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS07970 63e0bef9868b7fad4254e4b5af8f4326 178 PANTHER PTHR10245:SF9 1 178 2.6E-72 T 22-04-2016 APECO1_RS07970 63e0bef9868b7fad4254e4b5af8f4326 178 Pfam PF07883 Cupin domain 104 171 8.1E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APECO1_RS07970 63e0bef9868b7fad4254e4b5af8f4326 178 Gene3D G3DSA:2.60.120.10 85 177 9.3E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS07970 63e0bef9868b7fad4254e4b5af8f4326 178 Pfam PF01381 Helix-turn-helix 12 64 1.0E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS07970 63e0bef9868b7fad4254e4b5af8f4326 178 PANTHER PTHR10245 1 178 2.6E-72 T 22-04-2016 APECO1_RS07970 63e0bef9868b7fad4254e4b5af8f4326 178 SUPERFAMILY SSF51182 51 176 2.74E-23 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS07970 63e0bef9868b7fad4254e4b5af8f4326 178 Gene3D G3DSA:1.10.260.40 2 78 1.9E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS20085 99c901452f2430495c5fd151e7b35a12 445 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 19 432 3.3E-172 T 22-04-2016 IPR026332 Putative heme utilization radical SAM enzyme HutW APECO1_RS20085 99c901452f2430495c5fd151e7b35a12 445 PANTHER PTHR13932 1 439 6.3E-142 T 22-04-2016 APECO1_RS20085 99c901452f2430495c5fd151e7b35a12 445 Gene3D G3DSA:3.80.30.20 60 259 1.0E-27 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APECO1_RS20085 99c901452f2430495c5fd151e7b35a12 445 Pfam PF04055 Radical SAM superfamily 63 230 5.6E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS20085 99c901452f2430495c5fd151e7b35a12 445 SMART SM00729 57 279 1.8E-52 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS20085 99c901452f2430495c5fd151e7b35a12 445 SUPERFAMILY SSF102114 44 428 3.27E-89 T 22-04-2016 APECO1_RS20085 99c901452f2430495c5fd151e7b35a12 445 PANTHER PTHR13932:SF5 1 439 6.3E-142 T 22-04-2016 APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 Gene3D G3DSA:2.30.330.10 52 136 4.4E-39 T 22-04-2016 APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 49 2.7E-19 T 22-04-2016 IPR031576 Flagellar motor switch protein FliN, N-terminal APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 3.3E-26 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 SUPERFAMILY SSF101801 54 135 4.32E-27 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 PANTHER PTHR22617 1 135 5.6E-38 T 22-04-2016 APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 128 8.6E-34 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.8E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.8E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.8E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APECO1_RS10390 969490a17625a7b9f8c1ae5159aa8781 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.8E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82866 296 497 6.28E-47 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 Gene3D G3DSA:3.30.2090.10 722 810 9.6E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82866 834 1026 6.28E-44 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.4E-112 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 3.4E-112 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.4E-112 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.4E-112 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.4E-112 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.4E-112 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.4E-112 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.4E-112 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.4E-112 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 Gene3D G3DSA:3.30.70.1430 38 139 5.7E-37 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82693 38 132 4.71E-28 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 Gene3D G3DSA:3.30.2090.10 181 275 3.9E-25 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82693 565 669 4.45E-29 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PANTHER PTHR32063 1 1036 0.0 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82693 672 722 1.12E-23 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82693 809 857 1.12E-23 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 Gene3D G3DSA:3.30.70.1430 567 670 4.1E-36 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82714 723 810 1.44E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 Gene3D G3DSA:1.10.3850.10 815 1028 1.2E-54 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 Gene3D G3DSA:1.10.3850.10 279 498 3.0E-57 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 PANTHER PTHR32063:SF13 1 1036 0.0 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82693 135 182 2.09E-26 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82693 274 330 2.09E-26 T 22-04-2016 APECO1_RS20145 92cc6d9c767c4ecdd7cf13c89fd86b3c 1037 SUPERFAMILY SSF82714 182 272 1.44E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS08125 c1a3b08468e3f645d522f696b50b092b 226 Gene3D G3DSA:1.20.950.20 3 217 4.7E-72 T 22-04-2016 APECO1_RS08125 c1a3b08468e3f645d522f696b50b092b 226 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 226 4.4E-125 T 22-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 APECO1_RS08125 c1a3b08468e3f645d522f696b50b092b 226 SUPERFAMILY SSF103501 3 225 1.07E-70 T 22-04-2016 IPR023234 NarG-like domain APECO1_RS08125 c1a3b08468e3f645d522f696b50b092b 226 PANTHER PTHR30598 2 226 1.8E-174 T 22-04-2016 APECO1_RS08125 c1a3b08468e3f645d522f696b50b092b 226 PANTHER PTHR30598:SF4 2 226 1.8E-174 T 22-04-2016 APECO1_RS08125 c1a3b08468e3f645d522f696b50b092b 226 Pfam PF02665 Nitrate reductase gamma subunit 6 225 5.3E-78 T 22-04-2016 IPR023234 NarG-like domain APECO1_RS14825 977ce8806a2aa645622b342adb4254db 160 PANTHER PTHR30308 1 160 2.8E-88 T 22-04-2016 APECO1_RS14825 977ce8806a2aa645622b342adb4254db 160 Pfam PF01668 SmpB protein 13 75 3.9E-28 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 APECO1_RS14825 977ce8806a2aa645622b342adb4254db 160 SUPERFAMILY SSF74982 8 138 7.19E-51 T 22-04-2016 IPR023620 Small protein B APECO1_RS14825 977ce8806a2aa645622b342adb4254db 160 PANTHER PTHR30308:SF2 1 160 2.8E-88 T 22-04-2016 APECO1_RS14825 977ce8806a2aa645622b342adb4254db 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-69 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 APECO1_RS14825 977ce8806a2aa645622b342adb4254db 160 Gene3D G3DSA:2.40.280.10 13 133 1.4E-49 T 22-04-2016 IPR023620 Small protein B APECO1_RS14825 977ce8806a2aa645622b342adb4254db 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.317 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 APECO1_RS14825 977ce8806a2aa645622b342adb4254db 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.7E-54 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 APECO1_RS14825 977ce8806a2aa645622b342adb4254db 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site APECO1_RS04375 abc501f5c77c7a30b01513b7fa11f8ce 203 SUPERFAMILY SSF89392 22 202 1.22E-57 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APECO1_RS04375 abc501f5c77c7a30b01513b7fa11f8ce 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 201 33.028 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 APECO1_RS04375 abc501f5c77c7a30b01513b7fa11f8ce 203 Gene3D G3DSA:2.50.20.10 23 203 6.7E-61 T 22-04-2016 APECO1_RS04375 abc501f5c77c7a30b01513b7fa11f8ce 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 1.1E-58 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like APECO1_RS04375 abc501f5c77c7a30b01513b7fa11f8ce 203 PANTHER PTHR35869 1 203 4.8E-64 T 22-04-2016 APECO1_RS04375 abc501f5c77c7a30b01513b7fa11f8ce 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 5.6E-124 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 APECO1_RS14885 919cfaadd5aee49ef93c04dff92eb5e3 194 PANTHER PTHR40610 2 194 1.7E-56 T 22-04-2016 APECO1_RS14885 919cfaadd5aee49ef93c04dff92eb5e3 194 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 192 1.9E-41 T 22-04-2016 IPR018755 Bacteriophage Mu, Gp48 APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 PANTHER PTHR30445:SF1 1 550 3.5E-282 T 22-04-2016 APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 58.343 T 22-04-2016 IPR023018 Transport protein YidE, putative APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 4.3E-47 T 22-04-2016 IPR006512 YidE/YbjL duplication APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 4.5E-41 T 22-04-2016 IPR006512 YidE/YbjL duplication APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 5.5E-38 T 22-04-2016 IPR006512 YidE/YbjL duplication APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 4.5E-52 T 22-04-2016 IPR006512 YidE/YbjL duplication APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 PANTHER PTHR30445 1 550 3.5E-282 T 22-04-2016 APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 Gene3D G3DSA:3.30.70.1450 288 360 5.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 Gene3D G3DSA:3.30.70.1450 213 278 1.0E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 SUPERFAMILY SSF116726 206 271 2.09E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 Pfam PF02080 TrkA-C domain 212 270 5.3E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 Pfam PF02080 TrkA-C domain 292 360 4.6E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS21055 67952cc57a0085dd9fe3198b334daadd 553 SUPERFAMILY SSF116726 286 360 1.57E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 Gene3D G3DSA:3.40.50.720 184 358 6.1E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 PANTHER PTHR21089 272 359 1.6E-153 T 22-04-2016 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 PANTHER PTHR21089 40 256 1.6E-153 T 22-04-2016 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 PIRSF PIRSF000445 1 418 1.9E-154 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 1.4E-48 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 1.9E-169 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 4.4E-49 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 7.3E-24 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 PANTHER PTHR21089:SF3 272 359 1.6E-153 T 22-04-2016 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 PANTHER PTHR21089:SF3 40 256 1.6E-153 T 22-04-2016 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 SUPERFAMILY SSF69075 317 417 1.96E-27 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 SUPERFAMILY SSF51735 162 315 1.83E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.763 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS06410 717c2fc732d226e10b0168a487309697 418 SUPERFAMILY SSF69742 1 158 3.27E-47 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 Gene3D G3DSA:3.30.360.10 145 314 7.3E-52 T 22-04-2016 APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 SUPERFAMILY SSF55347 132 319 3.87E-51 T 22-04-2016 APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 PANTHER PTHR10174:SF2 48 337 3.7E-54 T 22-04-2016 APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 Gene3D G3DSA:3.40.50.720 1 144 4.7E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 PANTHER PTHR10174 48 337 3.7E-54 T 22-04-2016 APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 6.7E-42 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 SMART SM00859 6 121 6.8E-32 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 117 1.4E-25 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 SUPERFAMILY SSF51735 5 157 6.83E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12880 c376921aa18036b93abcbf8bf8d6f45a 337 PIRSF PIRSF000148 4 337 6.6E-101 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APECO1_RS12020 25039a1482469b5f2e4756711abe51d9 332 PANTHER PTHR30036 4 332 8.7E-152 T 22-04-2016 APECO1_RS12020 25039a1482469b5f2e4756711abe51d9 332 PANTHER PTHR30036:SF2 4 332 8.7E-152 T 22-04-2016 APECO1_RS12020 25039a1482469b5f2e4756711abe51d9 332 Gene3D G3DSA:3.40.50.2300 170 315 1.7E-40 T 22-04-2016 APECO1_RS12020 25039a1482469b5f2e4756711abe51d9 332 Gene3D G3DSA:3.40.50.2300 25 169 3.1E-40 T 22-04-2016 APECO1_RS12020 25039a1482469b5f2e4756711abe51d9 332 SUPERFAMILY SSF53822 25 330 2.94E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS12020 25039a1482469b5f2e4756711abe51d9 332 Pfam PF13407 Periplasmic binding protein domain 28 299 9.8E-64 T 22-04-2016 IPR025997 Periplasmic binding protein APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 3.2E-35 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 1.2E-38 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 Gene3D G3DSA:1.10.10.10 86 168 4.0E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 PANTHER PTHR10815 1 167 3.4E-58 T 22-04-2016 APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 PANTHER PTHR10815:SF5 1 167 3.4E-58 T 22-04-2016 APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 SUPERFAMILY SSF46767 86 169 8.5E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 SUPERFAMILY SSF53155 9 91 7.45E-6 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 83 2.6E-20 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APECO1_RS07385 6d46c043ac26f96f870efc1c8a95e57c 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 4 169 40.478 T 22-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.6E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 Gene3D G3DSA:3.30.1340.10 1 83 1.8E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 7.6E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 SUPERFAMILY SSF55594 1 82 1.44E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 PANTHER PTHR33705:SF1 1 84 1.8E-40 T 22-04-2016 APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 PANTHER PTHR33705 1 84 1.8E-40 T 22-04-2016 APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APECO1_RS13600 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APECO1_RS15775 65fa8534717f4498012197a9bedf951b 545 Pfam PF06418 CTP synthase N-terminus 5 266 5.0E-126 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APECO1_RS15775 65fa8534717f4498012197a9bedf951b 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.6E-266 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APECO1_RS15775 65fa8534717f4498012197a9bedf951b 545 SUPERFAMILY SSF52317 289 542 2.06E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS15775 65fa8534717f4498012197a9bedf951b 545 Gene3D G3DSA:3.40.50.880 288 541 1.7E-97 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS15775 65fa8534717f4498012197a9bedf951b 545 Gene3D G3DSA:3.40.50.300 1 280 4.1E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15775 65fa8534717f4498012197a9bedf951b 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.8E-65 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APECO1_RS15775 65fa8534717f4498012197a9bedf951b 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 50.971 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APECO1_RS15775 65fa8534717f4498012197a9bedf951b 545 SUPERFAMILY SSF52540 3 269 4.18E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15775 65fa8534717f4498012197a9bedf951b 545 PANTHER PTHR11550 1 542 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APECO1_RS00375 a68b1b343928e34604b03ec18aeb7ae7 536 PANTHER PTHR30183 1 535 0.0 T 22-04-2016 APECO1_RS00375 a68b1b343928e34604b03ec18aeb7ae7 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 5.3E-296 T 22-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 APECO1_RS00375 a68b1b343928e34604b03ec18aeb7ae7 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 524 1.7E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS00375 a68b1b343928e34604b03ec18aeb7ae7 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 267 3.5E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS00375 a68b1b343928e34604b03ec18aeb7ae7 536 PANTHER PTHR30183:SF8 1 535 0.0 T 22-04-2016 APECO1_RS00375 a68b1b343928e34604b03ec18aeb7ae7 536 Gene3D G3DSA:1.10.3720.10 18 267 4.9E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS00375 a68b1b343928e34604b03ec18aeb7ae7 536 Gene3D G3DSA:1.10.3720.10 292 532 3.0E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS00375 a68b1b343928e34604b03ec18aeb7ae7 536 SUPERFAMILY SSF161098 289 527 1.42E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS00375 a68b1b343928e34604b03ec18aeb7ae7 536 SUPERFAMILY SSF161098 12 265 5.51E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS24610 f0d1233ca95f743a927fe329d7424072 154 SUPERFAMILY SSF102114 16 117 2.35E-6 T 22-04-2016 APECO1_RS24610 f0d1233ca95f743a927fe329d7424072 154 PIRSF PIRSF000368 1 154 2.3E-61 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- APECO1_RS24610 f0d1233ca95f743a927fe329d7424072 154 Gene3D G3DSA:3.20.20.70 22 129 8.8E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS24610 f0d1233ca95f743a927fe329d7424072 154 PANTHER PTHR30352 1 154 1.9E-75 T 22-04-2016 APECO1_RS24610 f0d1233ca95f743a927fe329d7424072 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 7.8E-53 T 22-04-2016 APECO1_RS24610 f0d1233ca95f743a927fe329d7424072 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 2.9E-66 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- APECO1_RS24610 f0d1233ca95f743a927fe329d7424072 154 PANTHER PTHR30352:SF2 1 154 1.9E-75 T 22-04-2016 APECO1_RS24610 f0d1233ca95f743a927fe329d7424072 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 SUPERFAMILY SSF158472 178 225 2.09E-5 T 22-04-2016 APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 SUPERFAMILY SSF55874 467 583 1.7E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 SMART SM00387 494 587 5.0E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 PANTHER PTHR24421:SF12 87 583 4.4E-225 T 22-04-2016 APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 130 1.6E-9 T 22-04-2016 IPR029095 NarX-like, N-terminal APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 Pfam PF07730 Histidine kinase 390 453 2.0E-18 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 PANTHER PTHR24421 87 583 4.4E-225 T 22-04-2016 APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 583 1.9E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 Pfam PF00672 HAMP domain 160 224 8.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 SMART SM00304 176 228 1.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 PIRSF PIRSF003167 1 597 3.5E-196 T 22-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 APECO1_RS06475 031ff40361fd0ffeecb54227b92046e9 598 Gene3D G3DSA:3.30.565.10 461 583 5.7E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS22375 8a56bfbc12f9b301174b33a9fc0c62ec 99 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 4 96 1.8E-38 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APECO1_RS22375 8a56bfbc12f9b301174b33a9fc0c62ec 99 PANTHER PTHR38769:SF1 1 99 8.0E-33 T 22-04-2016 APECO1_RS22375 8a56bfbc12f9b301174b33a9fc0c62ec 99 Pfam PF04175 Protein of unknown function (DUF406) 5 96 3.5E-29 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APECO1_RS22375 8a56bfbc12f9b301174b33a9fc0c62ec 99 PANTHER PTHR38769 1 99 8.0E-33 T 22-04-2016 APECO1_RS22375 8a56bfbc12f9b301174b33a9fc0c62ec 99 Gene3D G3DSA:3.30.70.860 23 99 5.5E-30 T 22-04-2016 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 SUPERFAMILY SSF159800 12 195 1.7E-53 T 22-04-2016 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 Gene3D G3DSA:3.40.50.2300 1 99 1.3E-46 T 22-04-2016 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 Gene3D G3DSA:3.40.50.10660 100 176 5.8E-37 T 22-04-2016 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 313 328 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 444 453 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 SMART SM00382 238 401 1.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 Gene3D G3DSA:3.40.50.300 221 399 2.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 Pfam PF02954 Bacterial regulatory protein, Fis family 498 527 3.7E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 Gene3D G3DSA:1.10.10.60 451 527 3.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 Gene3D G3DSA:1.20.5.170 178 220 2.9E-28 T 22-04-2016 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 8 527 5.5E-267 T 22-04-2016 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 Gene3D G3DSA:1.10.8.60 400 450 2.4E-16 T 22-04-2016 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 Pfam PF00158 Sigma-54 interaction domain 219 393 1.3E-64 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 Pfam PF06506 Propionate catabolism activator 36 196 7.9E-51 T 22-04-2016 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 SUPERFAMILY SSF46689 444 527 1.43E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 SUPERFAMILY SSF52540 217 461 2.61E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 PANTHER PTHR32071 4 528 1.4E-196 T 22-04-2016 APECO1_RS01780 836f4ddb9de597c698c07624115c5a22 528 PANTHER PTHR32071:SF32 4 528 1.4E-196 T 22-04-2016 APECO1_RS03515 3cd35766035d6143ff28ad993dd5c4c0 371 Gene3D G3DSA:1.25.40.10 264 366 2.2E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS03515 3cd35766035d6143ff28ad993dd5c4c0 371 PANTHER PTHR23083:SF364 261 366 1.4E-12 T 22-04-2016 APECO1_RS03515 3cd35766035d6143ff28ad993dd5c4c0 371 PANTHER PTHR23083 261 366 1.4E-12 T 22-04-2016 APECO1_RS03515 3cd35766035d6143ff28ad993dd5c4c0 371 Pfam PF13176 Tetratricopeptide repeat 341 368 0.03 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS03515 3cd35766035d6143ff28ad993dd5c4c0 371 Pfam PF13414 TPR repeat 272 313 1.4E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS03515 3cd35766035d6143ff28ad993dd5c4c0 371 SMART SM00028 299 332 2.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS03515 3cd35766035d6143ff28ad993dd5c4c0 371 SMART SM00028 339 371 92.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS03515 3cd35766035d6143ff28ad993dd5c4c0 371 SMART SM00028 265 298 0.0015 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS03515 3cd35766035d6143ff28ad993dd5c4c0 371 SUPERFAMILY SSF48452 262 366 6.9E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS19320 693b315dcca58aea4e10ca149cda4777 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 1.9E-84 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APECO1_RS19320 693b315dcca58aea4e10ca149cda4777 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site APECO1_RS19320 693b315dcca58aea4e10ca149cda4777 268 PANTHER PTHR30520:SF5 3 266 8.9E-131 T 22-04-2016 APECO1_RS19320 693b315dcca58aea4e10ca149cda4777 268 PANTHER PTHR30520 3 266 8.9E-131 T 22-04-2016 APECO1_RS19320 693b315dcca58aea4e10ca149cda4777 268 Pfam PF01226 Formate/nitrite transporter 20 247 1.0E-56 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APECO1_RS19320 693b315dcca58aea4e10ca149cda4777 268 Gene3D G3DSA:1.20.1080.10 24 250 3.2E-60 T 22-04-2016 IPR023271 Aquaporin-like APECO1_RS19320 693b315dcca58aea4e10ca149cda4777 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site APECO1_RS14865 038e2d267c37620e4a75230d28ac79c3 163 PANTHER PTHR35191 14 162 6.4E-17 T 22-04-2016 APECO1_RS14865 038e2d267c37620e4a75230d28ac79c3 163 Pfam PF07484 Phage Tail Collar Domain 24 71 7.9E-15 T 22-04-2016 IPR011083 Phage tail collar domain APECO1_RS14865 038e2d267c37620e4a75230d28ac79c3 163 SUPERFAMILY SSF88874 11 162 1.83E-40 T 22-04-2016 APECO1_RS14865 038e2d267c37620e4a75230d28ac79c3 163 Gene3D G3DSA:3.90.1340.10 19 76 3.7E-15 T 22-04-2016 IPR011083 Phage tail collar domain APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 SUPERFAMILY SSF50182 114 179 6.87E-17 T 22-04-2016 IPR010920 LSM domain APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 PANTHER PTHR30221 16 285 1.6E-115 T 22-04-2016 APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 Pfam PF05552 Conserved TM helix 16 64 3.2E-13 T 22-04-2016 IPR008910 Conserved TM helix APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 PANTHER PTHR30221:SF7 16 285 1.6E-115 T 22-04-2016 APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 Pfam PF00924 Mechanosensitive ion channel 72 268 1.7E-59 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 SUPERFAMILY SSF82861 28 112 7.98E-18 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 Gene3D G3DSA:3.30.70.100 182 266 6.0E-33 T 22-04-2016 APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 Gene3D G3DSA:2.30.30.60 129 178 6.0E-20 T 22-04-2016 APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 SUPERFAMILY SSF82689 181 278 2.48E-33 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APECO1_RS16555 efef4a345edb3eacc67b4b99c580b204 286 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APECO1_RS16420 8fd775744e7470db62c72962d1a30d70 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 573 4.7E-170 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 APECO1_RS16420 8fd775744e7470db62c72962d1a30d70 577 Pfam PF01368 DHH family 74 207 8.4E-11 T 22-04-2016 IPR001667 DDH domain APECO1_RS16420 8fd775744e7470db62c72962d1a30d70 577 PANTHER PTHR30255 2 576 2.4E-230 T 22-04-2016 APECO1_RS16420 8fd775744e7470db62c72962d1a30d70 577 SUPERFAMILY SSF64182 48 465 2.62E-117 T 22-04-2016 APECO1_RS16420 8fd775744e7470db62c72962d1a30d70 577 Pfam PF02272 DHHA1 domain 382 449 4.2E-16 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APECO1_RS16420 8fd775744e7470db62c72962d1a30d70 577 PANTHER PTHR30255:SF2 2 576 2.4E-230 T 22-04-2016 APECO1_RS08110 4ab1d1398028c5099f6ee34721eedf04 189 SUPERFAMILY SSF50475 7 186 2.7E-38 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS08110 4ab1d1398028c5099f6ee34721eedf04 189 Pfam PF01613 Flavin reductase like domain 19 151 5.6E-15 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APECO1_RS08110 4ab1d1398028c5099f6ee34721eedf04 189 PANTHER PTHR30466:SF6 1 186 3.5E-54 T 22-04-2016 APECO1_RS08110 4ab1d1398028c5099f6ee34721eedf04 189 PANTHER PTHR30466 1 186 3.5E-54 T 22-04-2016 APECO1_RS08110 4ab1d1398028c5099f6ee34721eedf04 189 SMART SM00903 14 158 5.7E-14 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APECO1_RS08110 4ab1d1398028c5099f6ee34721eedf04 189 Gene3D G3DSA:2.30.110.10 4 187 5.0E-47 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS18755 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.609 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APECO1_RS18755 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.0E-105 T 22-04-2016 APECO1_RS18755 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 PANTHER PTHR18895 10 290 2.0E-175 T 22-04-2016 APECO1_RS18755 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 SUPERFAMILY SSF53335 42 291 4.7E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS18755 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 PANTHER PTHR18895:SF69 10 290 2.0E-175 T 22-04-2016 APECO1_RS18755 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 5.9E-128 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APECO1_RS18755 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 Gene3D G3DSA:3.40.50.150 98 286 3.0E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS18755 1a5b4cfd7c254375c6ea0f23a4f8d07d 293 PIRSF PIRSF000401 1 293 4.8E-94 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APECO1_RS15695 40eb0d9c38ed8a0bc25c770707d129bb 86 SUPERFAMILY SSF54862 32 84 3.67E-9 T 22-04-2016 APECO1_RS15695 40eb0d9c38ed8a0bc25c770707d129bb 86 PIRSF PIRSF036548 2 86 3.8E-25 T 22-04-2016 IPR012206 Ferredoxin-like, FixX GO:0005506 APECO1_RS15695 40eb0d9c38ed8a0bc25c770707d129bb 86 PANTHER PTHR10617 7 71 4.1E-16 T 22-04-2016 APECO1_RS15695 40eb0d9c38ed8a0bc25c770707d129bb 86 PANTHER PTHR10617:SF119 7 71 4.1E-16 T 22-04-2016 APECO1_RS15695 40eb0d9c38ed8a0bc25c770707d129bb 86 Gene3D G3DSA:3.30.70.20 31 69 4.2E-6 T 22-04-2016 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 Pfam PF00267 Gram-negative porin 29 360 2.3E-154 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 Gene3D G3DSA:2.40.160.10 24 360 1.0E-107 T 22-04-2016 IPR023614 Porin domain APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 24 40 9.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 153 175 9.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 98 120 9.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 53 71 9.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 268 287 9.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 9.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 3.3E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 3.3E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 312 329 3.3E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 3.3E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 98 108 3.3E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PANTHER PTHR34501:SF4 3 360 5.2E-212 T 22-04-2016 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 PANTHER PTHR34501 3 360 5.2E-212 T 22-04-2016 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 SUPERFAMILY SSF56935 24 360 9.68E-87 T 22-04-2016 APECO1_RS10315 6b77d6eee10b831fc4b5487429214341 360 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 312 328 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 Gene3D G3DSA:2.40.128.130 938 1252 3.1E-69 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 328 359 3.9E-7 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 809 1252 4.2E-111 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 Gene3D G3DSA:2.160.20.20 462 930 9.9E-36 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 PANTHER PTHR12338 865 1252 1.9E-179 T 22-04-2016 APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 PANTHER PTHR12338 1 310 1.9E-179 T 22-04-2016 APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 PANTHER PTHR12338 327 849 1.9E-179 T 22-04-2016 APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 SUPERFAMILY SSF51126 415 922 1.1E-40 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 SUPERFAMILY SSF103515 973 1252 1.02E-30 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 SMART SM00869 986 1241 2.9E-32 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 SUPERFAMILY SSF51126 97 267 4.5E-5 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 PANTHER PTHR12338:SF5 865 1252 1.9E-179 T 22-04-2016 APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 PANTHER PTHR12338:SF5 1 310 1.9E-179 T 22-04-2016 APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 PANTHER PTHR12338:SF5 327 849 1.9E-179 T 22-04-2016 APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 Pfam PF03797 Autotransporter beta-domain 987 1231 3.2E-36 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 TIGRFAM TIGR01376 POMP_repeat: chlamydial polymorphic outer membrane protein repeat 124 146 4.8E-4 T 22-04-2016 IPR003368 Polymorphic outer membrane protein repeat APECO1_RS12455 226a6e230d6dfaac604378bd413c2989 1252 TIGRFAM TIGR01376 POMP_repeat: chlamydial polymorphic outer membrane protein repeat 228 248 2.5E-5 T 22-04-2016 IPR003368 Polymorphic outer membrane protein repeat APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 416 4.9E-237 T 22-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 Pfam PF02515 CoA-transferase family III 5 393 4.1E-94 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 416 65.257 T 22-04-2016 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695|UniPathway: UPA00540 APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 SUPERFAMILY SSF89796 1 416 2.09E-125 T 22-04-2016 IPR023606 CoA-transferase family III domain APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 PANTHER PTHR24023 255 403 5.7E-31 T 22-04-2016 APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 PANTHER PTHR24023 36 213 5.7E-31 T 22-04-2016 APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 Gene3D G3DSA:3.30.1540.10 246 326 2.4E-29 T 22-04-2016 APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 Gene3D G3DSA:3.40.50.10540 2 216 1.7E-101 T 22-04-2016 IPR023606 CoA-transferase family III domain APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 Gene3D G3DSA:3.40.50.10540 327 416 1.7E-101 T 22-04-2016 IPR023606 CoA-transferase family III domain APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 PANTHER PTHR24023:SF593 255 403 5.7E-31 T 22-04-2016 APECO1_RS13385 a1b3f0db2d213a76874f2397cd2e2bf2 416 PANTHER PTHR24023:SF593 36 213 5.7E-31 T 22-04-2016 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 Gene3D G3DSA:2.40.40.20 369 532 2.8E-43 T 22-04-2016 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 459 486 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 SUPERFAMILY SSF50692 409 547 5.65E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 PANTHER PTHR11615:SF112 1 549 5.6E-193 T 22-04-2016 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 Gene3D G3DSA:3.40.50.740 1 14 2.3E-48 T 22-04-2016 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 Gene3D G3DSA:3.40.50.740 222 353 2.3E-48 T 22-04-2016 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 SUPERFAMILY SSF53706 2 407 1.7E-145 T 22-04-2016 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 PANTHER PTHR11615 1 549 5.6E-193 T 22-04-2016 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 Pfam PF00384 Molybdopterin oxidoreductase 1 331 1.6E-88 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 Pfam PF01568 Molydopterin dinucleotide binding domain 420 526 2.1E-26 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 529 5.9E-255 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 Gene3D G3DSA:3.40.228.10 15 207 1.7E-78 T 22-04-2016 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 Gene3D G3DSA:1.20.5.460 533 559 3.5E-19 T 22-04-2016 APECO1_RS23360 85b9db011b4e0b8910a3de7ce50ac012 559 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 277 294 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 Gene3D G3DSA:3.40.50.300 10 193 2.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 SUPERFAMILY SSF52540 11 205 1.57E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 1.5E-120 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 Pfam PF07650 KH domain 209 285 2.0E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 170 1.3E-41 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.354 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 PANTHER PTHR11649 5 300 2.2E-122 T 22-04-2016 APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.2E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 PANTHER PTHR11649:SF3 5 300 2.2E-122 T 22-04-2016 APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 SUPERFAMILY SSF54814 182 297 1.96E-40 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APECO1_RS14510 2fccd1e1f3386a89238f3efe7376897d 301 Gene3D G3DSA:3.30.300.20 194 294 2.7E-40 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 SUPERFAMILY SSF52540 6 232 9.69E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 Gene3D G3DSA:1.10.10.10 835 892 5.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 890 1.9E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 Gene3D G3DSA:3.40.50.300 31 143 7.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 PANTHER PTHR26402:SF567 810 897 1.1E-19 T 22-04-2016 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 PANTHER PTHR26402:SF567 75 100 1.1E-19 T 22-04-2016 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 PANTHER PTHR26402 810 897 1.1E-19 T 22-04-2016 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 PANTHER PTHR26402 75 100 1.1E-19 T 22-04-2016 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 SUPERFAMILY SSF48452 442 803 3.8E-155 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 850 877 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 899 41.54 T 22-04-2016 IPR023768 Transcriptional regulator HTH-type, MalT APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 878 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 866 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 850 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 SMART SM00421 833 890 3.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 Gene3D G3DSA:1.25.40.10 439 808 7.7E-108 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS19550 abc17d8a730bd24e4730ea020238e777 901 SUPERFAMILY SSF46894 828 892 1.6E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS00870 a65f51736bb37722a40bc90d7096ca23 376 Pfam PF05651 Putative sugar diacid recognition 1 129 1.4E-47 T 22-04-2016 IPR008599 Putative sugar diacid recognition APECO1_RS00870 a65f51736bb37722a40bc90d7096ca23 376 Gene3D G3DSA:1.10.10.60 330 349 6.1E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS00870 a65f51736bb37722a40bc90d7096ca23 376 PANTHER PTHR33744:SF1 1 375 4.2E-179 T 22-04-2016 APECO1_RS00870 a65f51736bb37722a40bc90d7096ca23 376 PANTHER PTHR33744 1 375 4.2E-179 T 22-04-2016 APECO1_RS00870 a65f51736bb37722a40bc90d7096ca23 376 Pfam PF13556 PucR C-terminal helix-turn-helix domain 314 372 2.8E-22 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain APECO1_RS13885 ce671ab5befc3ce6428bb25b8bc0ce1c 353 PANTHER PTHR21716:SF19 1 352 2.4E-161 T 22-04-2016 APECO1_RS13885 ce671ab5befc3ce6428bb25b8bc0ce1c 353 PANTHER PTHR21716 1 352 2.4E-161 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APECO1_RS13885 ce671ab5befc3ce6428bb25b8bc0ce1c 353 Pfam PF01594 Domain of unknown function DUF20 20 345 3.0E-86 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 Pfam PF00581 Rhodanese-like domain 179 263 1.1E-11 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 Pfam PF00581 Rhodanese-like domain 297 418 8.9E-12 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 PANTHER PTHR11364:SF15 127 429 9.2E-204 T 22-04-2016 APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 SMART SM00450 26 139 6.5E-5 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 SMART SM00450 146 267 4.8E-19 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 SMART SM00450 294 422 1.8E-15 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 Gene3D G3DSA:3.40.250.10 10 128 8.0E-12 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 ProSitePatterns PS00380 Rhodanese signature 1. 181 192 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 ProSitePatterns PS00683 Rhodanese C-terminal signature. 406 416 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 Gene3D G3DSA:3.40.250.10 140 278 5.9E-36 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 SUPERFAMILY SSF52821 141 275 3.27E-27 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 SUPERFAMILY SSF52821 33 128 9.69E-9 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 Gene3D G3DSA:3.40.250.10 289 428 3.6E-32 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 PANTHER PTHR11364 127 429 9.2E-204 T 22-04-2016 APECO1_RS09415 47ece4ebf32db9e370c7c8d049f3003a 435 SUPERFAMILY SSF52821 288 428 1.44E-31 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS01880 b58610ee0c1f52981825239daeaa2024 255 Pfam PF00005 ABC transporter 17 156 3.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS01880 b58610ee0c1f52981825239daeaa2024 255 SMART SM00382 26 205 3.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS01880 b58610ee0c1f52981825239daeaa2024 255 PANTHER PTHR24220 3 243 6.6E-145 T 22-04-2016 APECO1_RS01880 b58610ee0c1f52981825239daeaa2024 255 SUPERFAMILY SSF52540 1 212 1.77E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01880 b58610ee0c1f52981825239daeaa2024 255 Gene3D G3DSA:3.40.50.300 1 210 1.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01880 b58610ee0c1f52981825239daeaa2024 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS01880 b58610ee0c1f52981825239daeaa2024 255 PANTHER PTHR24220:SF564 3 243 6.6E-145 T 22-04-2016 APECO1_RS02740 980e975bad80a6951a05581c4fe6c7fd 745 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 524 628 9.0E-18 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 APECO1_RS02740 980e975bad80a6951a05581c4fe6c7fd 745 PANTHER PTHR30258:SF2 477 700 6.0E-53 T 22-04-2016 APECO1_RS02740 980e975bad80a6951a05581c4fe6c7fd 745 SUPERFAMILY SSF53448 71 401 1.01E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS02740 980e975bad80a6951a05581c4fe6c7fd 745 PANTHER PTHR30258 477 700 6.0E-53 T 22-04-2016 APECO1_RS02740 980e975bad80a6951a05581c4fe6c7fd 745 Pfam PF13632 Glycosyl transferase family group 2 165 381 8.4E-45 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS02740 980e975bad80a6951a05581c4fe6c7fd 745 SUPERFAMILY SSF160246 485 623 8.5E-26 T 22-04-2016 APECO1_RS12100 f0b9653713cfd5c93297a4c9aa3251b9 416 PANTHER PTHR10590 1 413 7.4E-184 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS12100 f0b9653713cfd5c93297a4c9aa3251b9 416 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 2.0E-21 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS12100 f0b9653713cfd5c93297a4c9aa3251b9 416 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 412 5.9E-156 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS12100 f0b9653713cfd5c93297a4c9aa3251b9 416 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 412 1.3E-66 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 2.9E-290 T 22-04-2016 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 SUPERFAMILY SSF52540 241 485 3.29E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 Gene3D G3DSA:3.40.50.300 3 233 1.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 Pfam PF00005 ABC transporter 21 171 5.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 Pfam PF00005 ABC transporter 278 433 3.1E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 Gene3D G3DSA:3.40.50.300 249 504 8.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 SUPERFAMILY SSF52540 3 228 4.05E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 PANTHER PTHR24220:SF392 6 387 4.0E-221 T 22-04-2016 APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 PANTHER PTHR24220 6 387 4.0E-221 T 22-04-2016 APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 SMART SM00382 286 482 1.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS20450 0b4274fae1d60e261f097093839da83b 513 SMART SM00382 29 219 2.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS10875 1dfe57da234a7efdf09d2984eac983b6 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 149 1.8E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS10875 1dfe57da234a7efdf09d2984eac983b6 673 Gene3D G3DSA:2.40.170.20 153 672 2.4E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS10875 1dfe57da234a7efdf09d2984eac983b6 673 Pfam PF00593 TonB dependent receptor 434 669 6.4E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS10875 1dfe57da234a7efdf09d2984eac983b6 673 PANTHER PTHR32552 1 672 3.6E-293 T 22-04-2016 APECO1_RS10875 1dfe57da234a7efdf09d2984eac983b6 673 PANTHER PTHR32552:SF11 1 672 3.6E-293 T 22-04-2016 APECO1_RS10875 1dfe57da234a7efdf09d2984eac983b6 673 Gene3D G3DSA:2.170.130.10 22 152 2.6E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS10875 1dfe57da234a7efdf09d2984eac983b6 673 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 672 2.7E-149 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APECO1_RS10875 1dfe57da234a7efdf09d2984eac983b6 673 SUPERFAMILY SSF56935 19 672 3.66E-94 T 22-04-2016 APECO1_RS05540 ed9d1ef40ad9253240c1cbbaae08e97c 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 28.555 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APECO1_RS05540 ed9d1ef40ad9253240c1cbbaae08e97c 213 PANTHER PTHR10344 1 212 3.6E-76 T 22-04-2016 APECO1_RS05540 ed9d1ef40ad9253240c1cbbaae08e97c 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 200 2.4E-70 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APECO1_RS05540 ed9d1ef40ad9253240c1cbbaae08e97c 213 Pfam PF02223 Thymidylate kinase 8 200 5.7E-61 T 22-04-2016 APECO1_RS05540 ed9d1ef40ad9253240c1cbbaae08e97c 213 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APECO1_RS05540 ed9d1ef40ad9253240c1cbbaae08e97c 213 Gene3D G3DSA:3.40.50.300 2 209 2.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05540 ed9d1ef40ad9253240c1cbbaae08e97c 213 SUPERFAMILY SSF52540 1 209 4.19E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03225 671e9a111cf76fc000372e4c0887bf0b 554 Gene3D G3DSA:3.60.20.10 2 191 2.9E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS03225 671e9a111cf76fc000372e4c0887bf0b 554 SUPERFAMILY SSF56235 1 196 2.92E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS03225 671e9a111cf76fc000372e4c0887bf0b 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 6.5E-42 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APECO1_RS03225 671e9a111cf76fc000372e4c0887bf0b 554 Gene3D G3DSA:3.40.50.620 192 510 1.9E-120 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS03225 671e9a111cf76fc000372e4c0887bf0b 554 Pfam PF00733 Asparagine synthase 211 511 5.3E-100 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 APECO1_RS03225 671e9a111cf76fc000372e4c0887bf0b 554 PANTHER PTHR11772 2 538 0.0 T 22-04-2016 APECO1_RS03225 671e9a111cf76fc000372e4c0887bf0b 554 PANTHER PTHR11772:SF11 2 538 0.0 T 22-04-2016 APECO1_RS03225 671e9a111cf76fc000372e4c0887bf0b 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 2.1E-128 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 APECO1_RS03225 671e9a111cf76fc000372e4c0887bf0b 554 SUPERFAMILY SSF52402 210 479 7.82E-76 T 22-04-2016 APECO1_RS13595 9675ae45136a897a184c15dedd7ec1c6 323 PANTHER PTHR10314:SF110 3 318 8.7E-160 T 22-04-2016 APECO1_RS13595 9675ae45136a897a184c15dedd7ec1c6 323 PANTHER PTHR10314 3 318 8.7E-160 T 22-04-2016 APECO1_RS13595 9675ae45136a897a184c15dedd7ec1c6 323 SUPERFAMILY SSF53686 3 317 1.1E-97 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS13595 9675ae45136a897a184c15dedd7ec1c6 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 7.4E-138 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APECO1_RS13595 9675ae45136a897a184c15dedd7ec1c6 323 Gene3D G3DSA:3.40.50.1100 133 314 7.1E-73 T 22-04-2016 APECO1_RS13595 9675ae45136a897a184c15dedd7ec1c6 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 1.0E-69 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS13595 9675ae45136a897a184c15dedd7ec1c6 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APECO1_RS13595 9675ae45136a897a184c15dedd7ec1c6 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 1.2E-146 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APECO1_RS13595 9675ae45136a897a184c15dedd7ec1c6 323 Gene3D G3DSA:3.40.50.1100 36 132 1.4E-38 T 22-04-2016 APECO1_RS10710 b2bac4c0b29019e513940447c6cee1a0 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 45 67 8.03E-15 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS10710 b2bac4c0b29019e513940447c6cee1a0 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 43 8.03E-15 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS10710 b2bac4c0b29019e513940447c6cee1a0 70 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 31 67 7.0E-6 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS10710 b2bac4c0b29019e513940447c6cee1a0 70 Pfam PF01848 Hok/gef family 25 66 1.8E-20 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS10710 b2bac4c0b29019e513940447c6cee1a0 70 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 30 49 - T 22-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 APECO1_RS17615 9097f034db72cf7bc5302e52f6a1850d 315 PANTHER PTHR30532 15 315 3.3E-42 T 22-04-2016 APECO1_RS17615 9097f034db72cf7bc5302e52f6a1850d 315 Gene3D G3DSA:3.40.50.1980 23 153 2.7E-22 T 22-04-2016 APECO1_RS17615 9097f034db72cf7bc5302e52f6a1850d 315 SUPERFAMILY SSF53807 22 293 4.32E-42 T 22-04-2016 APECO1_RS17615 9097f034db72cf7bc5302e52f6a1850d 315 Pfam PF01497 Periplasmic binding protein 97 254 5.1E-20 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APECO1_RS17615 9097f034db72cf7bc5302e52f6a1850d 315 Gene3D G3DSA:3.40.50.1980 163 306 8.3E-14 T 22-04-2016 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 SUPERFAMILY SSF52499 1 209 1.31E-64 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 PIRSF PIRSF001111 1 285 1.4E-132 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 Pfam PF00550 Phosphopantetheine attachment site 217 276 1.7E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 Gene3D G3DSA:3.40.50.850 1 229 1.6E-77 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 SUPERFAMILY SSF47336 209 280 3.93E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 PRINTS PR01398 Isochorismatase signature 112 134 2.7E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 PRINTS PR01398 Isochorismatase signature 168 186 2.7E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 PRINTS PR01398 Isochorismatase signature 2 14 2.7E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 PRINTS PR01398 Isochorismatase signature 186 203 2.7E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 PRINTS PR01398 Isochorismatase signature 63 80 2.7E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 PRINTS PR01398 Isochorismatase signature 80 99 2.7E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 Gene3D G3DSA:1.10.1200.10 230 282 1.3E-5 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 PANTHER PTHR11080:SF4 6 263 6.2E-176 T 22-04-2016 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 Pfam PF00857 Isochorismatase family 32 205 3.7E-38 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS02895 d86cbc59170ea19583ca269d1d94c5c1 285 PANTHER PTHR11080 6 263 6.2E-176 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Pfam PF13247 4Fe-4S dicluster domain 53 136 3.4E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.30.70.20 94 150 1.3E-12 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.30.70.20 9 65 6.9E-10 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.50.50.60 313 409 6.0E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.50.50.60 559 631 1.4E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 188 298 3.1E-36 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.30.70.20 66 93 1.8E-13 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:1.10.1060.10 173 312 1.3E-41 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 312 334 8.2E-36 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 377 387 8.2E-36 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 335 348 8.2E-36 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 488 501 8.2E-36 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 PRINTS PR00419 Adrenodoxin reductase family signature 454 468 8.2E-36 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 PANTHER PTHR11938:SF89 264 639 0.0 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 PANTHER PTHR11938:SF89 1 106 0.0 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 PANTHER PTHR11938 264 639 0.0 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 PANTHER PTHR11938 1 106 0.0 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 SUPERFAMILY SSF51971 311 565 2.65E-64 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 312 623 2.0E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 171 635 3.8E-256 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 Gene3D G3DSA:3.50.50.60 410 558 4.2E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 SUPERFAMILY SSF54862 180 274 2.72E-41 T 22-04-2016 APECO1_RS16385 ae4ac8c5363502a10cc280934938b958 639 SUPERFAMILY SSF54862 1 153 2.72E-41 T 22-04-2016 APECO1_RS13665 fba85d05d695ab68cf36684c692a2b64 299 SUPERFAMILY SSF54909 1 296 1.45E-90 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS13665 fba85d05d695ab68cf36684c692a2b64 299 PANTHER PTHR30521 1 299 2.2E-137 T 22-04-2016 APECO1_RS13665 fba85d05d695ab68cf36684c692a2b64 299 Pfam PF04261 Dyp-type peroxidase family 5 295 3.3E-98 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APECO1_RS13665 fba85d05d695ab68cf36684c692a2b64 299 PANTHER PTHR30521:SF0 1 299 2.2E-137 T 22-04-2016 APECO1_RS13665 fba85d05d695ab68cf36684c692a2b64 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 296 1.5E-90 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 Gene3D G3DSA:2.40.30.10 193 289 8.3E-26 T 22-04-2016 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 PANTHER PTHR23115 401 595 6.7E-279 T 22-04-2016 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 PANTHER PTHR23115 2 373 6.7E-279 T 22-04-2016 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 SUPERFAMILY SSF54980 292 370 2.01E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 Gene3D G3DSA:3.30.70.240 401 489 3.8E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 Gene3D G3DSA:3.40.50.300 2 192 9.3E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.5E-52 T 22-04-2016 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 SUPERFAMILY SSF54980 399 493 3.93E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.751 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 Pfam PF00679 Elongation factor G C-terminus 399 482 3.6E-19 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 PANTHER PTHR23115:SF175 401 595 6.7E-279 T 22-04-2016 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 PANTHER PTHR23115:SF175 2 373 6.7E-279 T 22-04-2016 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.8E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.04E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.04E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.04E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.04E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.04E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 2.1E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 Gene3D G3DSA:3.30.70.870 291 369 7.8E-26 T 22-04-2016 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 SUPERFAMILY SSF52540 2 235 4.65E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.9E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APECO1_RS14525 79a96b858ca0e10779098b166a4f48c9 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.8E-301 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 APECO1_RS22880 e6759f848ab70e3800e614c19c6ae714 533 ProSitePatterns PS00510 Malate synthase signature. 266 281 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS22880 e6759f848ab70e3800e614c19c6ae714 533 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 532 7.6E-250 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS22880 e6759f848ab70e3800e614c19c6ae714 533 PANTHER PTHR21631:SF1 1 532 2.2E-280 T 22-04-2016 APECO1_RS22880 e6759f848ab70e3800e614c19c6ae714 533 Gene3D G3DSA:3.20.20.360 73 413 2.9E-123 T 22-04-2016 APECO1_RS22880 e6759f848ab70e3800e614c19c6ae714 533 PIRSF PIRSF001363 2 533 1.8E-251 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS22880 e6759f848ab70e3800e614c19c6ae714 533 Gene3D G3DSA:1.20.1220.12 414 526 4.3E-38 T 22-04-2016 APECO1_RS22880 e6759f848ab70e3800e614c19c6ae714 533 Pfam PF01274 Malate synthase 12 532 1.3E-213 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS22880 e6759f848ab70e3800e614c19c6ae714 533 PANTHER PTHR21631 1 532 2.2E-280 T 22-04-2016 APECO1_RS22880 e6759f848ab70e3800e614c19c6ae714 533 SUPERFAMILY SSF51645 11 532 4.71E-190 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APECO1_RS05885 977a8be70bc426eaf12b0d43041e9a73 175 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 2 168 3.2E-80 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 APECO1_RS05885 977a8be70bc426eaf12b0d43041e9a73 175 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 4 170 1.3E-63 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 PANTHER PTHR33823 8 149 9.5E-71 T 22-04-2016 APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.333 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 1.7E-51 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 SUPERFAMILY SSF109635 9 109 1.07E-37 T 22-04-2016 APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.93E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.93E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 22-04-2016 APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 3.0E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APECO1_RS00785 5492ee991adc2f4a849470a45e6b2141 151 PANTHER PTHR33823:SF2 8 149 9.5E-71 T 22-04-2016 APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 SUPERFAMILY SSF56784 6 217 1.79E-47 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 Gene3D G3DSA:3.40.50.1000 10 195 1.1E-28 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.45E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 1.45E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.45E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.45E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 1.3E-10 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PANTHER PTHR18901:SF7 1 222 3.3E-139 T 22-04-2016 APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 1.3E-19 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS19450 50de4a9acc2a2c50cf28b01e4ddd6a12 222 PANTHER PTHR18901 1 222 3.3E-139 T 22-04-2016 APECO1_RS07600 91f91475080d2964c72e7b58374070b9 263 SMART SM00470 8 94 2.5E-17 T 22-04-2016 IPR003115 ParB/Sulfiredoxin APECO1_RS07600 91f91475080d2964c72e7b58374070b9 263 Pfam PF02195 ParB-like nuclease domain 11 93 2.9E-14 T 22-04-2016 IPR003115 ParB/Sulfiredoxin APECO1_RS07600 91f91475080d2964c72e7b58374070b9 263 SUPERFAMILY SSF110849 7 138 6.63E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin APECO1_RS07600 91f91475080d2964c72e7b58374070b9 263 Gene3D G3DSA:3.90.1530.10 4 94 9.6E-18 T 22-04-2016 APECO1_RS20705 b97b5b23e039d433080a01450a0c0bb0 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 2.8E-91 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APECO1_RS20705 b97b5b23e039d433080a01450a0c0bb0 348 PANTHER PTHR30160:SF7 1 347 6.5E-122 T 22-04-2016 APECO1_RS20705 b97b5b23e039d433080a01450a0c0bb0 348 Gene3D G3DSA:3.40.50.2000 168 344 3.3E-55 T 22-04-2016 APECO1_RS20705 b97b5b23e039d433080a01450a0c0bb0 348 SUPERFAMILY SSF53756 1 343 6.28E-102 T 22-04-2016 APECO1_RS20705 b97b5b23e039d433080a01450a0c0bb0 348 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 9.7E-172 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 APECO1_RS20705 b97b5b23e039d433080a01450a0c0bb0 348 Gene3D G3DSA:3.40.50.2000 1 147 1.9E-59 T 22-04-2016 APECO1_RS20705 b97b5b23e039d433080a01450a0c0bb0 348 PANTHER PTHR30160 1 347 6.5E-122 T 22-04-2016 APECO1_RS00485 80169ac40b04644e64f19b23f346f32f 414 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 45 400 1.6E-134 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 APECO1_RS00485 80169ac40b04644e64f19b23f346f32f 414 PANTHER PTHR30474 24 414 4.0E-190 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APECO1_RS00485 80169ac40b04644e64f19b23f346f32f 414 PANTHER PTHR30474:SF2 24 414 4.0E-190 T 22-04-2016 APECO1_RS00485 80169ac40b04644e64f19b23f346f32f 414 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 359 383 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 APECO1_RS00485 80169ac40b04644e64f19b23f346f32f 414 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 43 410 42.309 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 APECO1_RS00485 80169ac40b04644e64f19b23f346f32f 414 Pfam PF01098 Cell cycle protein 47 402 4.1E-131 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APECO1_RS05715 d81e6b0365300b913960bf1a9e609b6c 213 PANTHER PTHR38100 2 209 2.0E-103 T 22-04-2016 APECO1_RS05715 d81e6b0365300b913960bf1a9e609b6c 213 Gene3D G3DSA:1.10.3890.10 2 209 9.3E-89 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APECO1_RS05715 d81e6b0365300b913960bf1a9e609b6c 213 SUPERFAMILY SSF101322 2 210 2.48E-82 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APECO1_RS05715 d81e6b0365300b913960bf1a9e609b6c 213 PANTHER PTHR38100:SF1 2 209 2.0E-103 T 22-04-2016 APECO1_RS05715 d81e6b0365300b913960bf1a9e609b6c 213 Pfam PF04356 Protein of unknown function (DUF489) 7 199 3.0E-75 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APECO1_RS05715 d81e6b0365300b913960bf1a9e609b6c 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 9.0E-110 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APECO1_RS05715 d81e6b0365300b913960bf1a9e609b6c 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.48 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 Pfam PF08245 Mur ligase middle domain 108 291 2.6E-18 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 Gene3D G3DSA:3.40.1190.10 92 312 2.9E-83 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 PANTHER PTHR23135 1 449 0.0 T 22-04-2016 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 Gene3D G3DSA:3.40.50.720 1 90 5.7E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 PANTHER PTHR23135:SF17 1 449 0.0 T 22-04-2016 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 Gene3D G3DSA:3.90.190.20 313 449 2.1E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 SUPERFAMILY SSF51984 1 90 1.31E-24 T 22-04-2016 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 Pfam PF01225 Mur ligase family, catalytic domain 2 101 4.7E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 SUPERFAMILY SSF53623 95 308 1.44E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.577 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 361 7.2E-10 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 2.3E-276 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 APECO1_RS24590 6b35dd90051a99c50a20aa701f4f85c3 457 SUPERFAMILY SSF53244 312 447 4.45E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS23850 39a94d5bdbe087d258934fa3a5c1282d 508 PIRSF PIRSF036410 1 508 5.5E-228 T 22-04-2016 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related UniPathway: UPA00560 APECO1_RS23850 39a94d5bdbe087d258934fa3a5c1282d 508 PANTHER PTHR11699:SF68 18 462 5.2E-144 T 22-04-2016 APECO1_RS23850 39a94d5bdbe087d258934fa3a5c1282d 508 Pfam PF00171 Aldehyde dehydrogenase family 62 462 1.3E-31 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS23850 39a94d5bdbe087d258934fa3a5c1282d 508 Gene3D G3DSA:3.40.605.10 65 293 3.3E-25 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS23850 39a94d5bdbe087d258934fa3a5c1282d 508 SUPERFAMILY SSF53720 67 498 3.8E-64 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS23850 39a94d5bdbe087d258934fa3a5c1282d 508 Gene3D G3DSA:3.40.309.10 294 467 2.3E-27 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS23850 39a94d5bdbe087d258934fa3a5c1282d 508 PANTHER PTHR11699 18 462 5.2E-144 T 22-04-2016 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 PANTHER PTHR30346 5 294 1.2E-167 T 22-04-2016 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 7.9E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 Pfam PF03466 LysR substrate binding domain 93 292 2.2E-38 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 Gene3D G3DSA:3.40.190.10 94 182 8.6E-19 T 22-04-2016 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 Gene3D G3DSA:3.40.190.10 183 269 3.0E-23 T 22-04-2016 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 SUPERFAMILY SSF46785 8 92 1.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 PANTHER PTHR30346:SF4 5 294 1.2E-167 T 22-04-2016 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 SUPERFAMILY SSF53850 94 292 1.5E-30 T 22-04-2016 APECO1_RS13540 e4856944ad1599f52eb10ab12696ef1f 294 Gene3D G3DSA:1.10.10.10 8 92 2.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS06690 fa10ca4a235be9776b7c53f2d2fe3f83 212 Pfam PF00717 Peptidase S24-like 126 196 5.3E-9 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APECO1_RS06690 fa10ca4a235be9776b7c53f2d2fe3f83 212 SMART SM00530 9 64 1.8E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS06690 fa10ca4a235be9776b7c53f2d2fe3f83 212 SUPERFAMILY SSF51306 117 211 2.09E-18 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APECO1_RS06690 fa10ca4a235be9776b7c53f2d2fe3f83 212 Gene3D G3DSA:1.10.260.40 2 67 3.7E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS06690 fa10ca4a235be9776b7c53f2d2fe3f83 212 Gene3D G3DSA:2.10.109.10 117 211 1.3E-20 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APECO1_RS06690 fa10ca4a235be9776b7c53f2d2fe3f83 212 SUPERFAMILY SSF47413 2 69 2.82E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS01005 950d0e6fc466f2e5b8339e898edb656b 181 Gene3D G3DSA:3.10.640.10 1 179 1.8E-81 T 22-04-2016 APECO1_RS01005 950d0e6fc466f2e5b8339e898edb656b 181 SUPERFAMILY SSF52980 4 178 4.29E-69 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APECO1_RS01005 950d0e6fc466f2e5b8339e898edb656b 181 PANTHER PTHR38784:SF1 1 181 6.9E-103 T 22-04-2016 APECO1_RS01005 950d0e6fc466f2e5b8339e898edb656b 181 Pfam PF07152 YaeQ protein 1 173 1.2E-71 T 22-04-2016 IPR009822 YaeQ APECO1_RS01005 950d0e6fc466f2e5b8339e898edb656b 181 SMART SM01322 1 176 2.7E-110 T 22-04-2016 IPR009822 YaeQ APECO1_RS01005 950d0e6fc466f2e5b8339e898edb656b 181 PIRSF PIRSF011484 1 180 3.4E-65 T 22-04-2016 IPR009822 YaeQ APECO1_RS01005 950d0e6fc466f2e5b8339e898edb656b 181 PANTHER PTHR38784 1 181 6.9E-103 T 22-04-2016 APECO1_RS17630 899f6f29c3ec09d3541dcaa9a311ddc6 269 SUPERFAMILY SSF52540 10 230 1.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17630 899f6f29c3ec09d3541dcaa9a311ddc6 269 SMART SM00382 34 223 7.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS17630 899f6f29c3ec09d3541dcaa9a311ddc6 269 Pfam PF00005 ABC transporter 26 173 6.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS17630 899f6f29c3ec09d3541dcaa9a311ddc6 269 PANTHER PTHR24220 11 264 4.7E-115 T 22-04-2016 APECO1_RS17630 899f6f29c3ec09d3541dcaa9a311ddc6 269 Gene3D G3DSA:3.40.50.300 10 229 2.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17630 899f6f29c3ec09d3541dcaa9a311ddc6 269 PANTHER PTHR24220:SF438 11 264 4.7E-115 T 22-04-2016 APECO1_RS19230 8853529073485b6fbece9c490dc2c2ca 601 Pfam PF00999 Sodium/hydrogen exchanger family 11 373 2.5E-68 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APECO1_RS19230 8853529073485b6fbece9c490dc2c2ca 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 47.438 T 22-04-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 APECO1_RS19230 8853529073485b6fbece9c490dc2c2ca 601 Pfam PF02254 TrkA-N domain 403 514 9.4E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APECO1_RS19230 8853529073485b6fbece9c490dc2c2ca 601 Gene3D G3DSA:3.40.50.720 395 531 9.8E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS19230 8853529073485b6fbece9c490dc2c2ca 601 PANTHER PTHR16254 1 557 2.7E-266 T 22-04-2016 APECO1_RS19230 8853529073485b6fbece9c490dc2c2ca 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 4.0E-94 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APECO1_RS19230 8853529073485b6fbece9c490dc2c2ca 601 SUPERFAMILY SSF51735 402 529 1.69E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS19230 8853529073485b6fbece9c490dc2c2ca 601 PANTHER PTHR16254:SF6 1 557 2.7E-266 T 22-04-2016 APECO1_RS06230 20109c12e4f5a7c282f39b6f2c0f83a5 108 Pfam PF05166 YcgL domain 14 86 1.8E-33 T 22-04-2016 IPR027354 YcgL domain APECO1_RS06230 20109c12e4f5a7c282f39b6f2c0f83a5 108 SUPERFAMILY SSF160191 4 106 3.4E-43 T 22-04-2016 APECO1_RS06230 20109c12e4f5a7c282f39b6f2c0f83a5 108 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 12 93 4.0E-42 T 22-04-2016 IPR027354 YcgL domain APECO1_RS06230 20109c12e4f5a7c282f39b6f2c0f83a5 108 Hamap MF_01866 Protein YcgL [ycgL]. 12 99 27.677 T 22-04-2016 IPR027354 YcgL domain APECO1_RS06230 20109c12e4f5a7c282f39b6f2c0f83a5 108 PANTHER PTHR38109 13 106 8.6E-43 T 22-04-2016 APECO1_RS11945 dacf8958b65df1f1a5cefd58154fc07b 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 5.0E-44 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 APECO1_RS09060 94908636efdf36c16faa3c2ed0674250 370 PANTHER PTHR21716 3 370 3.7E-181 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APECO1_RS09060 94908636efdf36c16faa3c2ed0674250 370 PANTHER PTHR21716:SF20 3 370 3.7E-181 T 22-04-2016 APECO1_RS09060 94908636efdf36c16faa3c2ed0674250 370 Pfam PF01594 Domain of unknown function DUF20 15 344 1.3E-65 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APECO1_RS08220 c80a0bb49fe58fa074811cb6ed29d052 384 PANTHER PTHR30032 208 376 9.3E-97 T 22-04-2016 APECO1_RS08220 c80a0bb49fe58fa074811cb6ed29d052 384 PANTHER PTHR30032 1 188 9.3E-97 T 22-04-2016 APECO1_RS08220 c80a0bb49fe58fa074811cb6ed29d052 384 Pfam PF02638 Glycosyl hydrolase-like 10 1 335 7.7E-137 T 22-04-2016 IPR003790 Glycosyl hydrolase-like 10 APECO1_RS08220 c80a0bb49fe58fa074811cb6ed29d052 384 SUPERFAMILY SSF51445 26 310 2.19E-32 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS08220 c80a0bb49fe58fa074811cb6ed29d052 384 PANTHER PTHR30032:SF2 208 376 9.3E-97 T 22-04-2016 APECO1_RS08220 c80a0bb49fe58fa074811cb6ed29d052 384 PANTHER PTHR30032:SF2 1 188 9.3E-97 T 22-04-2016 APECO1_RS08220 c80a0bb49fe58fa074811cb6ed29d052 384 Gene3D G3DSA:3.20.20.80 34 185 4.0E-9 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS18495 811a1982a6ae0bbef99fd68ed90445a0 217 Gene3D G3DSA:3.40.50.880 1 216 3.0E-102 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS18495 811a1982a6ae0bbef99fd68ed90445a0 217 PIRSF PIRSF006320 1 216 1.3E-105 T 22-04-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 APECO1_RS18495 811a1982a6ae0bbef99fd68ed90445a0 217 SUPERFAMILY SSF52317 1 216 1.02E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS18495 811a1982a6ae0bbef99fd68ed90445a0 217 PANTHER PTHR10224 1 217 1.5E-128 T 22-04-2016 APECO1_RS07445 a6a350fa3fb27f161119a59010f402f3 46 PANTHER PTHR30349:SF36 1 46 5.2E-25 T 22-04-2016 APECO1_RS07445 a6a350fa3fb27f161119a59010f402f3 46 PANTHER PTHR30349 1 46 5.2E-25 T 22-04-2016 APECO1_RS07445 a6a350fa3fb27f161119a59010f402f3 46 Gene3D G3DSA:1.10.443.10 2 38 2.2E-5 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS07770 a6a350fa3fb27f161119a59010f402f3 46 PANTHER PTHR30349:SF36 1 46 5.2E-25 T 22-04-2016 APECO1_RS07770 a6a350fa3fb27f161119a59010f402f3 46 PANTHER PTHR30349 1 46 5.2E-25 T 22-04-2016 APECO1_RS07770 a6a350fa3fb27f161119a59010f402f3 46 Gene3D G3DSA:1.10.443.10 2 38 2.2E-5 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 3.0E-177 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Gene3D G3DSA:3.30.160.20 215 288 1.6E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Pfam PF03462 PCRF domain 13 203 2.5E-76 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 SUPERFAMILY SSF75620 12 353 7.32E-138 T 22-04-2016 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Gene3D G3DSA:1.20.58.410 6 93 1.8E-18 T 22-04-2016 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Pfam PF00472 RF-1 domain 216 321 3.5E-41 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 PANTHER PTHR11075 1 356 5.4E-183 T 22-04-2016 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 PANTHER PTHR11075:SF9 1 356 5.4E-183 T 22-04-2016 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 SMART SM00937 63 178 6.8E-72 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APECO1_RS06415 ebe0a3fcfb3e5d36ef27b7a5954b597f 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.334 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APECO1_RS22330 fd6f4c335101b7d08d1a8400555fc8db 166 Pfam PF07813 LTXXQ motif family protein 41 135 7.4E-22 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 APECO1_RS22330 fd6f4c335101b7d08d1a8400555fc8db 166 PANTHER PTHR38102:SF2 1 158 1.1E-109 T 22-04-2016 APECO1_RS22330 fd6f4c335101b7d08d1a8400555fc8db 166 PIRSF PIRSF034445 2 146 6.7E-31 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 APECO1_RS22330 fd6f4c335101b7d08d1a8400555fc8db 166 PANTHER PTHR38102 1 158 1.1E-109 T 22-04-2016 APECO1_RS00720 bbc3978c908645431aedef52a7ae0ca2 294 PANTHER PTHR34611:SF3 1 293 7.3E-167 T 22-04-2016 APECO1_RS00720 bbc3978c908645431aedef52a7ae0ca2 294 Pfam PF04754 Putative transposase, YhgA-like 7 207 6.3E-85 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like APECO1_RS00720 bbc3978c908645431aedef52a7ae0ca2 294 PANTHER PTHR34611 1 293 7.3E-167 T 22-04-2016 APECO1_RS00720 bbc3978c908645431aedef52a7ae0ca2 294 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 8 291 5.7E-84 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 APECO1_RS21505 f9de714674d1b64ac6831b260f357baa 93 PANTHER PTHR10657 4 92 2.2E-37 T 22-04-2016 APECO1_RS21505 f9de714674d1b64ac6831b260f357baa 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APECO1_RS21505 f9de714674d1b64ac6831b260f357baa 93 Gene3D G3DSA:3.10.50.40 5 91 3.3E-34 T 22-04-2016 APECO1_RS21505 f9de714674d1b64ac6831b260f357baa 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.4E-20 T 22-04-2016 APECO1_RS21505 f9de714674d1b64ac6831b260f357baa 93 SUPERFAMILY SSF54534 5 90 2.03E-28 T 22-04-2016 APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 PANTHER PTHR10799 6 159 5.3E-18 T 22-04-2016 APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 PANTHER PTHR10799 207 326 5.3E-18 T 22-04-2016 APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 330 2.0E-41 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 PANTHER PTHR10799:SF710 6 159 5.3E-18 T 22-04-2016 APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 PANTHER PTHR10799:SF710 207 326 5.3E-18 T 22-04-2016 APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 Gene3D G3DSA:3.30.450.40 5 169 1.7E-16 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 SUPERFAMILY SSF55073 179 330 1.26E-38 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 Gene3D G3DSA:3.30.70.270 175 334 3.9E-44 T 22-04-2016 APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 172 334 3.8E-37 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 SUPERFAMILY SSF55781 18 167 6.11E-17 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 SMART SM00065 18 164 9.5E-17 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 Pfam PF13185 GAF domain 17 155 7.2E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS09605 dc822f02e8de67ac61043f621f8dbba7 341 SMART SM00267 163 335 1.8E-53 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS20420 95cd67b80bb704b85c7237a4a449321c 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 38.065 T 22-04-2016 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 UniPathway: UPA00566 APECO1_RS20420 95cd67b80bb704b85c7237a4a449321c 331 Pfam PF01757 Acyltransferase family 5 318 2.2E-35 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 PANTHER PTHR23115 367 717 2.6E-213 T 22-04-2016 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 PANTHER PTHR23115 742 889 2.6E-213 T 22-04-2016 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF50447 791 887 3.73E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 393 548 1.7E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 PANTHER PTHR23115:SF184 367 717 2.6E-213 T 22-04-2016 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 PANTHER PTHR23115:SF184 742 889 2.6E-213 T 22-04-2016 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF52540 389 557 1.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 887 17.643 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 ProSitePatterns PS01176 Initiation factor 2 signature. 840 862 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF50447 563 644 7.9E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:2.40.30.10 791 887 3.4E-39 T 22-04-2016 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 56 94 4.9E-16 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Pfam PF11987 Translation-initiation factor 2 674 779 3.1E-36 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:3.40.50.10050 690 768 4.1E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:3.30.56.50 2 50 9.8E-23 T 22-04-2016 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF46955 3 50 9.89E-12 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:2.40.30.10 563 653 5.7E-21 T 22-04-2016 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 889 6.1E-298 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 6.9E-15 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 52 2.5E-7 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Pfam PF00009 Elongation factor Tu GTP binding domain 394 550 2.0E-35 T 22-04-2016 APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 Gene3D G3DSA:3.40.50.300 389 549 3.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18290 32641bfd55414623aabd421d4df1573c 890 SUPERFAMILY SSF52156 667 796 3.53E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 672 36.533 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 SUPERFAMILY SSF53822 258 287 6.47E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 SUPERFAMILY SSF53822 523 676 6.47E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 SUPERFAMILY SSF53822 352 484 6.47E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 Gene3D G3DSA:3.40.50.2300 354 424 1.4E-75 T 22-04-2016 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 Gene3D G3DSA:3.40.50.2300 256 287 1.4E-75 T 22-04-2016 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 Gene3D G3DSA:3.40.50.2300 601 665 1.4E-75 T 22-04-2016 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 SUPERFAMILY SSF48435 50 150 1.57E-5 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 Pfam PF04348 LppC putative lipoprotein 346 672 1.8E-86 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 PANTHER PTHR38038:SF1 316 678 2.8E-238 T 22-04-2016 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 PANTHER PTHR38038:SF1 2 287 2.8E-238 T 22-04-2016 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 Gene3D G3DSA:1.25.40.10 69 141 2.9E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 PANTHER PTHR38038 316 678 2.8E-238 T 22-04-2016 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 PANTHER PTHR38038 2 287 2.8E-238 T 22-04-2016 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 Gene3D G3DSA:3.40.50.2300 425 485 2.1E-55 T 22-04-2016 APECO1_RS18180 be144d0b4b5addf4aa9fb2af0505fad6 678 Gene3D G3DSA:3.40.50.2300 525 600 2.1E-55 T 22-04-2016 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 PANTHER PTHR32071 322 636 4.0E-78 T 22-04-2016 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 Pfam PF00158 Sigma-54 interaction domain 343 499 1.2E-30 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 PANTHER PTHR32071:SF16 322 636 4.0E-78 T 22-04-2016 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 Gene3D G3DSA:1.10.10.60 584 636 2.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 Gene3D G3DSA:3.30.450.20 220 309 1.6E-7 T 22-04-2016 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 Pfam PF00989 PAS fold 222 317 4.6E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 SUPERFAMILY SSF52540 344 572 2.44E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 SUPERFAMILY SSF46689 545 636 1.39E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 Gene3D G3DSA:3.40.50.300 337 505 2.8E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 Gene3D G3DSA:1.10.8.60 506 582 1.8E-13 T 22-04-2016 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 364 377 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 SUPERFAMILY SSF55785 222 308 7.04E-7 T 22-04-2016 IPR000014 PAS domain APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 419 434 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS24965 8b8c17d64f0bbb168b8d1da640ab224f 644 Pfam PF02954 Bacterial regulatory protein, Fis family 593 632 1.3E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS03360 a573bee6f3207ebee0eb0e5f3f09c684 439 PANTHER PTHR11785 2 438 1.5E-226 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS03360 a573bee6f3207ebee0eb0e5f3f09c684 439 PIRSF PIRSF006060 1 437 1.0E-47 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS03360 a573bee6f3207ebee0eb0e5f3f09c684 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 433 1.1E-255 T 22-04-2016 IPR027566 Putrescine-ornithine antiporter GO:0015496|GO:0015822|GO:0015847 APECO1_RS03360 a573bee6f3207ebee0eb0e5f3f09c684 439 Pfam PF13520 Amino acid permease 10 408 1.7E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS03360 a573bee6f3207ebee0eb0e5f3f09c684 439 PANTHER PTHR11785:SF341 2 438 1.5E-226 T 22-04-2016 APECO1_RS03360 a573bee6f3207ebee0eb0e5f3f09c684 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 432 2.2E-152 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 APECO1_RS21935 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 PANTHER PTHR10566 1 461 0.0 T 22-04-2016 APECO1_RS21935 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 446 2.0E-187 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 APECO1_RS21935 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Pfam PF03109 ABC1 family 116 232 1.2E-34 T 22-04-2016 IPR004147 UbiB domain APECO1_RS21935 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.997 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 APECO1_RS21935 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 PANTHER PTHR10566:SF79 1 461 0.0 T 22-04-2016 APECO1_RS21935 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Gene3D G3DSA:3.30.200.20 127 157 4.8E-4 T 22-04-2016 APECO1_RS21935 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 Gene3D G3DSA:3.30.200.20 193 228 4.8E-4 T 22-04-2016 APECO1_RS21935 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 SUPERFAMILY SSF56112 94 159 3.27E-49 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS21935 75b0f62d3b2dde5d77e1e1680a6e0e2c 546 SUPERFAMILY SSF56112 194 438 3.27E-49 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS20365 226ef3e7f0a5987542ffd9f9732c6f5e 146 Pfam PF13673 Acetyltransferase (GNAT) domain 47 124 2.8E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS20365 226ef3e7f0a5987542ffd9f9732c6f5e 146 PANTHER PTHR23091 1 124 1.1E-21 T 22-04-2016 APECO1_RS20365 226ef3e7f0a5987542ffd9f9732c6f5e 146 SUPERFAMILY SSF55729 1 140 1.06E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS20365 226ef3e7f0a5987542ffd9f9732c6f5e 146 Gene3D G3DSA:3.40.630.30 1 142 1.3E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS20365 226ef3e7f0a5987542ffd9f9732c6f5e 146 PANTHER PTHR23091:SF237 1 124 1.1E-21 T 22-04-2016 APECO1_RS22960 9bdfb0c9e36719a56f1b0716e9d5fbe3 315 Gene3D G3DSA:1.10.10.10 13 47 2.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22960 9bdfb0c9e36719a56f1b0716e9d5fbe3 315 SUPERFAMILY SSF100950 62 315 1.42E-64 T 22-04-2016 APECO1_RS22960 9bdfb0c9e36719a56f1b0716e9d5fbe3 315 Pfam PF04198 Putative sugar-binding domain 59 315 2.1E-76 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 APECO1_RS22960 9bdfb0c9e36719a56f1b0716e9d5fbe3 315 Gene3D G3DSA:3.40.50.1360 55 315 8.9E-76 T 22-04-2016 APECO1_RS22960 9bdfb0c9e36719a56f1b0716e9d5fbe3 315 Pfam PF13936 Helix-turn-helix domain 12 45 1.6E-8 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain APECO1_RS22960 9bdfb0c9e36719a56f1b0716e9d5fbe3 315 PANTHER PTHR34294:SF2 2 315 1.1E-96 T 22-04-2016 APECO1_RS22960 9bdfb0c9e36719a56f1b0716e9d5fbe3 315 PANTHER PTHR34294 2 315 1.1E-96 T 22-04-2016 APECO1_RS22960 9bdfb0c9e36719a56f1b0716e9d5fbe3 315 SUPERFAMILY SSF46689 7 53 2.87E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS19790 6bff92cc40cf836faefe610f7836a4dc 127 Gene3D G3DSA:3.40.630.30 27 87 3.9E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS19790 6bff92cc40cf836faefe610f7836a4dc 127 Pfam PF12568 Acetyltransferase (GNAT) domain 2 125 6.7E-50 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS19790 6bff92cc40cf836faefe610f7836a4dc 127 SUPERFAMILY SSF55729 6 120 4.29E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS19790 6bff92cc40cf836faefe610f7836a4dc 127 Hamap MF_02018 PanD maturation factor [panM]. 1 126 33.24 T 22-04-2016 IPR032900 PanD maturation factor PanM GO:0015940|GO:0031638 APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 Gene3D G3DSA:3.40.50.620 1 142 1.7E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 SUPERFAMILY SSF52402 4 153 7.03E-26 T 22-04-2016 APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 PANTHER PTHR31964:SF41 244 316 5.9E-77 T 22-04-2016 APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 PANTHER PTHR31964:SF41 1 88 5.9E-77 T 22-04-2016 APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 Pfam PF00582 Universal stress protein family 174 300 5.7E-15 T 22-04-2016 IPR006016 UspA GO:0006950 APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 Pfam PF00582 Universal stress protein family 3 146 1.5E-18 T 22-04-2016 IPR006016 UspA GO:0006950 APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 SUPERFAMILY SSF52402 155 307 5.86E-25 T 22-04-2016 APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 PANTHER PTHR31964 244 316 5.9E-77 T 22-04-2016 APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 PANTHER PTHR31964 1 88 5.9E-77 T 22-04-2016 APECO1_RS07375 716e68a97fbca16b35ec7ff2a5d22076 316 Gene3D G3DSA:3.40.50.620 143 303 2.2E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS01795 2e409f9c6a831d0c6d948fe183e9a1ec 483 PANTHER PTHR16943:SF19 1 483 1.7E-279 T 22-04-2016 APECO1_RS01795 2e409f9c6a831d0c6d948fe183e9a1ec 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 483 1.7E-279 T 22-04-2016 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79|UniPathway: UPA00946 APECO1_RS01795 2e409f9c6a831d0c6d948fe183e9a1ec 483 Gene3D G3DSA:3.30.1330.120 287 426 2.8E-64 T 22-04-2016 APECO1_RS01795 2e409f9c6a831d0c6d948fe183e9a1ec 483 SUPERFAMILY SSF103378 13 482 1.03E-160 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 APECO1_RS01795 2e409f9c6a831d0c6d948fe183e9a1ec 483 PANTHER PTHR16943 1 483 1.7E-279 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 APECO1_RS01795 2e409f9c6a831d0c6d948fe183e9a1ec 483 Pfam PF03972 MmgE/PrpD family 18 462 3.3E-158 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 APECO1_RS20625 bc508bae85f7bc26816905299cfc53d4 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 5.6E-240 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APECO1_RS20625 bc508bae85f7bc26816905299cfc53d4 551 PANTHER PTHR30003:SF0 2 551 0.0 T 22-04-2016 APECO1_RS20625 bc508bae85f7bc26816905299cfc53d4 551 Pfam PF02652 L-lactate permease 16 542 2.4E-233 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APECO1_RS20625 bc508bae85f7bc26816905299cfc53d4 551 PANTHER PTHR30003 2 551 0.0 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 1.3E-78 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 9.9E-109 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 PANTHER PTHR10584 1 309 2.4E-109 T 22-04-2016 APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 176 191 9.0E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 9 30 9.0E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 36 55 9.0E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 220 231 9.0E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 PRINTS PR00990 Ribokinase signature 108 121 9.0E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 Gene3D G3DSA:3.40.1190.20 7 307 2.2E-98 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 SUPERFAMILY SSF53613 7 307 1.87E-86 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS21400 68560fdc0b6a6db66e1fbc87cf5bc402 309 PANTHER PTHR10584:SF166 1 309 2.4E-109 T 22-04-2016 APECO1_RS09660 6248f390dadad35370646b3ea31313a0 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 4.3E-69 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 APECO1_RS09660 6248f390dadad35370646b3ea31313a0 231 Gene3D G3DSA:3.30.420.40 1 133 1.8E-45 T 22-04-2016 APECO1_RS09660 6248f390dadad35370646b3ea31313a0 231 SUPERFAMILY SSF53067 3 106 2.42E-30 T 22-04-2016 APECO1_RS09660 6248f390dadad35370646b3ea31313a0 231 PANTHER PTHR11735 1 138 2.1E-63 T 22-04-2016 APECO1_RS09660 6248f390dadad35370646b3ea31313a0 231 SUPERFAMILY SSF53067 108 217 2.85E-31 T 22-04-2016 APECO1_RS09660 6248f390dadad35370646b3ea31313a0 231 Pfam PF00814 Glycoprotease family 28 131 1.1E-27 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS09660 6248f390dadad35370646b3ea31313a0 231 PANTHER PTHR11735:SF11 1 138 2.1E-63 T 22-04-2016 APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PANTHER PTHR24322 199 231 3.2E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PANTHER PTHR24322 54 183 3.2E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 275 3.9E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 3.9E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 3.9E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 3.9E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 138 3.9E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 3.9E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 291 7.2E-58 T 22-04-2016 APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 6.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 6.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 6.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 186 214 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PANTHER PTHR24322:SF399 199 231 3.2E-59 T 22-04-2016 APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 PANTHER PTHR24322:SF399 54 183 3.2E-59 T 22-04-2016 APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 SUPERFAMILY SSF51735 48 293 7.77E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17445 ff1fe5192ebf9bf29bae6e34f32801f5 294 Gene3D G3DSA:3.40.50.720 45 292 3.3E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00940 00a782218a942c1a99d326d5dc7f41eb 161 SMART SM00935 10 161 2.4E-39 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APECO1_RS00940 00a782218a942c1a99d326d5dc7f41eb 161 PANTHER PTHR35089 2 160 8.9E-57 T 22-04-2016 APECO1_RS00940 00a782218a942c1a99d326d5dc7f41eb 161 Gene3D G3DSA:3.30.910.20 11 57 2.1E-35 T 22-04-2016 APECO1_RS00940 00a782218a942c1a99d326d5dc7f41eb 161 Gene3D G3DSA:3.30.910.20 92 161 2.1E-35 T 22-04-2016 APECO1_RS00940 00a782218a942c1a99d326d5dc7f41eb 161 PANTHER PTHR35089:SF1 2 160 8.9E-57 T 22-04-2016 APECO1_RS00940 00a782218a942c1a99d326d5dc7f41eb 161 Pfam PF03938 Outer membrane protein (OmpH-like) 9 159 1.5E-29 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APECO1_RS00940 00a782218a942c1a99d326d5dc7f41eb 161 PIRSF PIRSF002094 1 161 1.0E-51 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APECO1_RS03350 98257c33755f9e76f0a0f496edf3456e 181 SUPERFAMILY SSF47598 1 35 4.45E-14 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APECO1_RS03350 98257c33755f9e76f0a0f496edf3456e 181 PIRSF PIRSF019401 1 181 1.3E-51 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 APECO1_RS03350 98257c33755f9e76f0a0f496edf3456e 181 SUPERFAMILY SSF82808 65 181 1.83E-50 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 APECO1_RS03350 98257c33755f9e76f0a0f496edf3456e 181 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 181 46.932 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 APECO1_RS03350 98257c33755f9e76f0a0f496edf3456e 181 Pfam PF03925 SeqA protein C-terminal domain 71 179 1.5E-50 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 APECO1_RS03350 98257c33755f9e76f0a0f496edf3456e 181 Gene3D G3DSA:1.20.1380.10 68 181 5.3E-56 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 APECO1_RS03350 98257c33755f9e76f0a0f496edf3456e 181 Gene3D G3DSA:1.10.1220.10 1 40 6.8E-27 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APECO1_RS23760 d393f022c9cf8134e6a98749ae268e65 77 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 21 65 2.3E-9 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) APECO1_RS15195 ea5d82e1942eaa59891fff86934e0c3b 134 Gene3D G3DSA:1.10.287.1050 1 58 3.9E-23 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 APECO1_RS15195 ea5d82e1942eaa59891fff86934e0c3b 134 Pfam PF00816 H-NS histone family 38 128 3.2E-20 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APECO1_RS15195 ea5d82e1942eaa59891fff86934e0c3b 134 SUPERFAMILY SSF81273 3 58 1.96E-18 T 22-04-2016 APECO1_RS15195 ea5d82e1942eaa59891fff86934e0c3b 134 PANTHER PTHR38097:SF2 2 134 6.8E-78 T 22-04-2016 APECO1_RS15195 ea5d82e1942eaa59891fff86934e0c3b 134 PIRSF PIRSF002096 1 134 6.9E-56 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APECO1_RS15195 ea5d82e1942eaa59891fff86934e0c3b 134 Gene3D G3DSA:4.10.430.10 91 134 5.4E-26 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APECO1_RS15195 ea5d82e1942eaa59891fff86934e0c3b 134 PANTHER PTHR38097 2 134 6.8E-78 T 22-04-2016 APECO1_RS15195 ea5d82e1942eaa59891fff86934e0c3b 134 SUPERFAMILY SSF81273 92 134 7.85E-12 T 22-04-2016 APECO1_RS15195 ea5d82e1942eaa59891fff86934e0c3b 134 SMART SM00528 87 134 1.5E-27 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APECO1_RS03620 508cfe11b3004a702745c5bc8926ffb0 239 PANTHER PTHR36122 133 238 1.0E-126 T 22-04-2016 APECO1_RS03620 508cfe11b3004a702745c5bc8926ffb0 239 PANTHER PTHR36122 1 110 1.0E-126 T 22-04-2016 APECO1_RS03620 508cfe11b3004a702745c5bc8926ffb0 239 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 231 7.0E-75 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APECO1_RS03620 508cfe11b3004a702745c5bc8926ffb0 239 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 5.8E-51 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APECO1_RS03620 508cfe11b3004a702745c5bc8926ffb0 239 PANTHER PTHR36122:SF2 133 238 1.0E-126 T 22-04-2016 APECO1_RS03620 508cfe11b3004a702745c5bc8926ffb0 239 PANTHER PTHR36122:SF2 1 110 1.0E-126 T 22-04-2016 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 SUPERFAMILY SSF100950 80 238 1.02E-25 T 22-04-2016 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 Gene3D G3DSA:1.10.10.10 8 88 2.4E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 SUPERFAMILY SSF46785 9 73 2.93E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 SMART SM01134 77 238 8.6E-58 T 22-04-2016 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 Pfam PF08220 DeoR-like helix-turn-helix domain 11 66 1.8E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 7.2E-13 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 7.2E-13 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 SMART SM00420 11 63 1.7E-24 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 Gene3D G3DSA:3.40.50.1360 89 218 3.0E-13 T 22-04-2016 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 PANTHER PTHR30363:SF19 5 261 1.7E-148 T 22-04-2016 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 PANTHER PTHR30363 5 261 1.7E-148 T 22-04-2016 APECO1_RS22125 6b8eab3a4fdbe90ba7aaac3a500254e2 262 Pfam PF00455 DeoR C terminal sensor domain 80 236 6.7E-46 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS09955 5e314b5dec9369d3b0ed876ad0e66ed4 251 Pfam PF00005 ABC transporter 20 149 2.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS09955 5e314b5dec9369d3b0ed876ad0e66ed4 251 PANTHER PTHR24220:SF466 6 250 2.4E-169 T 22-04-2016 APECO1_RS09955 5e314b5dec9369d3b0ed876ad0e66ed4 251 SUPERFAMILY SSF52540 4 215 3.53E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09955 5e314b5dec9369d3b0ed876ad0e66ed4 251 Gene3D G3DSA:3.40.50.300 3 207 8.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09955 5e314b5dec9369d3b0ed876ad0e66ed4 251 PANTHER PTHR24220 6 250 2.4E-169 T 22-04-2016 APECO1_RS09955 5e314b5dec9369d3b0ed876ad0e66ed4 251 SMART SM00382 29 199 8.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS25975 c45f2b846963e432acfc316779dc5f3f 75 PANTHER PTHR30047:SF4 1 75 1.2E-58 T 22-04-2016 APECO1_RS25975 c45f2b846963e432acfc316779dc5f3f 75 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 3 74 2.8E-14 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APECO1_RS25975 c45f2b846963e432acfc316779dc5f3f 75 PANTHER PTHR30047 1 75 1.2E-58 T 22-04-2016 APECO1_RS15625 99c94b5689d8ad50530831ac746ce0e9 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.677 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS15625 99c94b5689d8ad50530831ac746ce0e9 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 2.8E-71 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS15625 99c94b5689d8ad50530831ac746ce0e9 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS15625 99c94b5689d8ad50530831ac746ce0e9 159 SUPERFAMILY SSF69765 1 156 2.88E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS15625 99c94b5689d8ad50530831ac746ce0e9 159 Gene3D G3DSA:3.30.1330.50 1 156 6.8E-73 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS15625 99c94b5689d8ad50530831ac746ce0e9 159 PANTHER PTHR32125 1 157 8.9E-63 T 22-04-2016 APECO1_RS15625 99c94b5689d8ad50530831ac746ce0e9 159 Pfam PF02542 YgbB family 1 154 7.1E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS07095 96fd780ae070c90f446ae9433374c47f 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.915 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 APECO1_RS07095 96fd780ae070c90f446ae9433374c47f 102 Pfam PF06305 Protein of unknown function (DUF1049) 23 85 2.6E-21 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 APECO1_RS14790 02e1bca41ed82d7c403c4d61f8e3d64e 413 Gene3D G3DSA:3.30.465.10 325 403 8.3E-25 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS14790 02e1bca41ed82d7c403c4d61f8e3d64e 413 Pfam PF01595 Domain of unknown function DUF21 2 169 9.5E-49 T 22-04-2016 IPR002550 Domain of unknown function DUF21 APECO1_RS14790 02e1bca41ed82d7c403c4d61f8e3d64e 413 SUPERFAMILY SSF54631 177 314 5.98E-23 T 22-04-2016 APECO1_RS14790 02e1bca41ed82d7c403c4d61f8e3d64e 413 Pfam PF03471 Transporter associated domain 329 403 8.5E-19 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS14790 02e1bca41ed82d7c403c4d61f8e3d64e 413 Gene3D G3DSA:3.10.580.10 176 315 1.1E-12 T 22-04-2016 APECO1_RS14790 02e1bca41ed82d7c403c4d61f8e3d64e 413 Pfam PF00571 CBS domain 263 311 1.2E-4 T 22-04-2016 IPR000644 CBS domain APECO1_RS14790 02e1bca41ed82d7c403c4d61f8e3d64e 413 SUPERFAMILY SSF56176 325 407 1.2E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS14790 02e1bca41ed82d7c403c4d61f8e3d64e 413 SMART SM01091 327 405 1.7E-25 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS00450 60e578c177a169cec19325fad173e260 313 Pfam PF01795 MraW methylase family 5 310 5.6E-124 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS00450 60e578c177a169cec19325fad173e260 313 PANTHER PTHR11265:SF0 1 313 6.3E-162 T 22-04-2016 APECO1_RS00450 60e578c177a169cec19325fad173e260 313 Gene3D G3DSA:3.40.50.150 7 110 3.8E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS00450 60e578c177a169cec19325fad173e260 313 Gene3D G3DSA:3.40.50.150 216 312 3.8E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS00450 60e578c177a169cec19325fad173e260 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 2.2E-136 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS00450 60e578c177a169cec19325fad173e260 313 SUPERFAMILY SSF53335 7 113 3.63E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS00450 60e578c177a169cec19325fad173e260 313 SUPERFAMILY SSF53335 213 310 3.63E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS00450 60e578c177a169cec19325fad173e260 313 PANTHER PTHR11265 1 313 6.3E-162 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS00450 60e578c177a169cec19325fad173e260 313 SUPERFAMILY SSF81799 114 213 5.75E-36 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS00450 60e578c177a169cec19325fad173e260 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 39.581 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS00450 60e578c177a169cec19325fad173e260 313 PIRSF PIRSF004486 1 312 2.3E-104 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS00450 60e578c177a169cec19325fad173e260 313 Gene3D G3DSA:1.10.150.170 112 215 4.8E-39 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS00445 526d26ccf42f95d6dbe58659d0dea996 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 135 2.7E-21 T 22-04-2016 IPR020603 MraZ domain APECO1_RS00445 526d26ccf42f95d6dbe58659d0dea996 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 3.7E-25 T 22-04-2016 IPR020603 MraZ domain APECO1_RS00445 526d26ccf42f95d6dbe58659d0dea996 152 SUPERFAMILY SSF89447 1 135 3.98E-46 T 22-04-2016 APECO1_RS00445 526d26ccf42f95d6dbe58659d0dea996 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 6.2E-68 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APECO1_RS00445 526d26ccf42f95d6dbe58659d0dea996 152 PANTHER PTHR34701 2 151 1.6E-65 T 22-04-2016 APECO1_RS00445 526d26ccf42f95d6dbe58659d0dea996 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 58.628 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APECO1_RS00445 526d26ccf42f95d6dbe58659d0dea996 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 139 3.0E-78 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APECO1_RS18125 6411c997c6374d0b5809a22358cbf04d 259 PANTHER PTHR32502 1 259 7.4E-86 T 22-04-2016 APECO1_RS18125 6411c997c6374d0b5809a22358cbf04d 259 PANTHER PTHR32502:SF8 1 259 7.4E-86 T 22-04-2016 APECO1_RS18125 6411c997c6374d0b5809a22358cbf04d 259 Pfam PF03609 PTS system sorbose-specific iic component 5 236 4.9E-72 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS23640 55cbfb1765fa3dd4aaa0ec13787026c2 485 Pfam PF00854 POT family 76 437 6.0E-90 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23640 55cbfb1765fa3dd4aaa0ec13787026c2 485 SUPERFAMILY SSF103473 4 290 1.96E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS23640 55cbfb1765fa3dd4aaa0ec13787026c2 485 PANTHER PTHR11654 1 368 1.0E-245 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23640 55cbfb1765fa3dd4aaa0ec13787026c2 485 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23640 55cbfb1765fa3dd4aaa0ec13787026c2 485 PANTHER PTHR11654:SF135 1 368 1.0E-245 T 22-04-2016 APECO1_RS23640 55cbfb1765fa3dd4aaa0ec13787026c2 485 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 457 3.3E-80 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APECO1_RS23640 55cbfb1765fa3dd4aaa0ec13787026c2 485 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 64 88 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23640 55cbfb1765fa3dd4aaa0ec13787026c2 485 Gene3D G3DSA:1.20.1250.20 18 185 1.2E-19 T 22-04-2016 APECO1_RS23640 55cbfb1765fa3dd4aaa0ec13787026c2 485 SUPERFAMILY SSF103473 213 472 6.28E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS10755 8e312427e63dd60741ebce04c901140d 84 Gene3D G3DSA:1.10.260.40 14 61 1.1E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS10755 8e312427e63dd60741ebce04c901140d 84 ProDom PD057771 CRO REGULATORY TRANSCRIPTION CP-933R REPRESSOR DNA-BINDING REGULATION BACTERIOPHAGE PROTEIN REGULATOR 4 71 1.0E-22 T 22-04-2016 IPR020114 Cro repressor, HK022-type APECO1_RS14370 3a2a66b47b00ebf8def1495bc445c5c9 284 Pfam PF12146 Serine aminopeptidase, S33 77 187 4.1E-13 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 APECO1_RS14370 3a2a66b47b00ebf8def1495bc445c5c9 284 PANTHER PTHR12277 14 282 2.6E-64 T 22-04-2016 APECO1_RS14370 3a2a66b47b00ebf8def1495bc445c5c9 284 SUPERFAMILY SSF53474 21 280 1.85E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS14370 3a2a66b47b00ebf8def1495bc445c5c9 284 Gene3D G3DSA:3.40.50.1820 39 276 5.8E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS17350 37cb04b55fbec2cb6f936ed0971dbca6 252 Gene3D G3DSA:3.40.50.300 23 240 8.9E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17350 37cb04b55fbec2cb6f936ed0971dbca6 252 SUPERFAMILY SSF52540 23 47 4.94E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17350 37cb04b55fbec2cb6f936ed0971dbca6 252 SUPERFAMILY SSF52540 96 196 4.94E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19045 d44845a02f8ee59d1e9b327b0534f8f6 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19045 d44845a02f8ee59d1e9b327b0534f8f6 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.1E-51 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APECO1_RS19045 d44845a02f8ee59d1e9b327b0534f8f6 110 PANTHER PTHR13501 1 109 6.2E-54 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APECO1_RS19045 d44845a02f8ee59d1e9b327b0534f8f6 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.067 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APECO1_RS19045 d44845a02f8ee59d1e9b327b0534f8f6 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 7.3E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19045 d44845a02f8ee59d1e9b327b0534f8f6 110 SUPERFAMILY SSF54843 1 109 4.06E-43 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19045 d44845a02f8ee59d1e9b327b0534f8f6 110 Gene3D G3DSA:3.90.470.10 1 109 3.1E-43 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APECO1_RS04170 9ffdf18182857a96a2180abdb7226f77 281 PANTHER PTHR30222 15 279 6.1E-91 T 22-04-2016 APECO1_RS04170 9ffdf18182857a96a2180abdb7226f77 281 SUPERFAMILY SSF161098 8 266 1.12E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04170 9ffdf18182857a96a2180abdb7226f77 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 273 2.3E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04170 9ffdf18182857a96a2180abdb7226f77 281 Gene3D G3DSA:1.10.3720.10 11 270 2.3E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04170 9ffdf18182857a96a2180abdb7226f77 281 PANTHER PTHR30222:SF1 15 279 6.1E-91 T 22-04-2016 APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 Gene3D G3DSA:1.10.1060.10 107 231 6.3E-37 T 22-04-2016 APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 7.6E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 SUPERFAMILY SSF54292 4 106 7.27E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 Gene3D G3DSA:3.10.20.30 2 106 3.3E-33 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 SUPERFAMILY SSF46548 107 229 1.48E-31 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 3.0E-31 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 9.0E-99 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 PANTHER PTHR11921 2 229 5.3E-101 T 22-04-2016 APECO1_RS24170 8a393143a34af79d0a0789affafed487 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 Pfam PF00128 Alpha amylase, catalytic domain 83 338 2.2E-19 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 Gene3D G3DSA:3.20.20.80 209 481 3.9E-110 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 Gene3D G3DSA:3.20.20.80 46 133 3.9E-110 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 PANTHER PTHR10357:SF132 389 542 5.0E-189 T 22-04-2016 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 PANTHER PTHR10357:SF132 80 340 5.0E-189 T 22-04-2016 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 PANTHER PTHR10357 389 542 5.0E-189 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 PANTHER PTHR10357 80 340 5.0E-189 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 SMART SM00642 48 477 4.2E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 SUPERFAMILY SSF51445 397 505 1.41E-76 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 SUPERFAMILY SSF51445 44 357 1.41E-76 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 PIRSF PIRSF003059 2 559 8.3E-218 T 22-04-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 Gene3D G3DSA:3.90.400.10 134 203 1.9E-23 T 22-04-2016 APECO1_RS07250 77a9b74b3a59ea3b96643a2428995e35 559 Gene3D G3DSA:2.60.40.1180 491 559 1.2E-20 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APECO1_RS13455 ffdb15eded2cbc4a89b6e9ece42b30e9 108 SUPERFAMILY SSF52794 4 101 1.2E-29 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS13455 ffdb15eded2cbc4a89b6e9ece42b30e9 108 PANTHER PTHR30505:SF0 2 108 6.7E-29 T 22-04-2016 APECO1_RS13455 ffdb15eded2cbc4a89b6e9ece42b30e9 108 Gene3D G3DSA:3.40.50.2300 2 102 8.0E-36 T 22-04-2016 APECO1_RS13455 ffdb15eded2cbc4a89b6e9ece42b30e9 108 PANTHER PTHR30505 2 108 6.7E-29 T 22-04-2016 APECO1_RS13455 ffdb15eded2cbc4a89b6e9ece42b30e9 108 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 90 5.7E-27 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APECO1_RS13455 ffdb15eded2cbc4a89b6e9ece42b30e9 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 98 2.1E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 SUPERFAMILY SSF51445 2 471 1.58E-162 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 PANTHER PTHR10353:SF74 1 474 0.0 T 22-04-2016 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 PANTHER PTHR10353 1 474 0.0 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 Pfam PF00232 Glycosyl hydrolase family 1 3 470 6.9E-135 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 Gene3D G3DSA:3.20.20.80 3 473 9.9E-153 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 8.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 8.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 8.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 8.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 8.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS15455 a45ee87b62d9214916aaf0bbed5b8673 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 PANTHER PTHR22993 1 269 2.7E-143 T 22-04-2016 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 Gene3D G3DSA:1.10.8.50 130 269 7.5E-52 T 22-04-2016 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 SMART SM00898 2 115 2.8E-55 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 SMART SM01232 129 221 3.8E-50 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 Gene3D G3DSA:3.20.190.10 2 129 7.1E-39 T 22-04-2016 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 SUPERFAMILY SSF57716 217 269 2.85E-17 T 22-04-2016 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.8E-32 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 SUPERFAMILY SSF46946 130 222 3.93E-31 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 PANTHER PTHR22993:SF15 1 269 2.7E-143 T 22-04-2016 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.0E-9 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.769 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.2E-108 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 SUPERFAMILY SSF81624 2 138 4.84E-45 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APECO1_RS20770 db028f41466ab64661a2627c5336d2c4 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.1E-31 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APECO1_RS03100 58413cfcb60f535f5da06861980ea456 203 SMART SM00855 2 156 3.6E-21 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APECO1_RS03100 58413cfcb60f535f5da06861980ea456 203 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 194 2.0E-54 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APECO1_RS03100 58413cfcb60f535f5da06861980ea456 203 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 181 1.0E-60 T 22-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 APECO1_RS03100 58413cfcb60f535f5da06861980ea456 203 PIRSF PIRSF000709 1 185 6.6E-17 T 22-04-2016 APECO1_RS03100 58413cfcb60f535f5da06861980ea456 203 PANTHER PTHR23029 1 195 2.6E-56 T 22-04-2016 APECO1_RS03100 58413cfcb60f535f5da06861980ea456 203 SUPERFAMILY SSF53254 1 195 1.24E-56 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS03100 58413cfcb60f535f5da06861980ea456 203 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APECO1_RS03100 58413cfcb60f535f5da06861980ea456 203 PANTHER PTHR23029:SF1 1 195 2.6E-56 T 22-04-2016 APECO1_RS03100 58413cfcb60f535f5da06861980ea456 203 Gene3D G3DSA:3.40.50.1240 1 195 2.3E-57 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS21395 19be1fe83a694bc8fcd9e001003ab5fe 296 Pfam PF13407 Periplasmic binding protein domain 29 281 2.2E-58 T 22-04-2016 IPR025997 Periplasmic binding protein APECO1_RS21395 19be1fe83a694bc8fcd9e001003ab5fe 296 PANTHER PTHR32196:SF9 13 295 6.4E-112 T 22-04-2016 APECO1_RS21395 19be1fe83a694bc8fcd9e001003ab5fe 296 SUPERFAMILY SSF53822 26 295 1.1E-88 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS21395 19be1fe83a694bc8fcd9e001003ab5fe 296 Gene3D G3DSA:3.40.50.2300 145 295 6.8E-55 T 22-04-2016 APECO1_RS21395 19be1fe83a694bc8fcd9e001003ab5fe 296 Gene3D G3DSA:3.40.50.2300 27 144 4.1E-44 T 22-04-2016 APECO1_RS21395 19be1fe83a694bc8fcd9e001003ab5fe 296 PANTHER PTHR32196 13 295 6.4E-112 T 22-04-2016 APECO1_RS15020 ae72f9afcb50f1487fd007adc7ac44dc 101 Pfam PF16083 LydA holin phage, holin superfamily III 14 90 2.9E-21 T 22-04-2016 IPR032126 LydA-like holin APECO1_RS21370 7459c4a5d879d50a6652bc6419387ba8 498 Pfam PF12592 Protein of unknown function (DUF3763) 444 497 3.6E-22 T 22-04-2016 IPR022547 ATPase, RavA, C-terminal GO:0016820 APECO1_RS21370 7459c4a5d879d50a6652bc6419387ba8 498 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 2.1E-24 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 APECO1_RS21370 7459c4a5d879d50a6652bc6419387ba8 498 Gene3D G3DSA:3.40.50.300 25 183 1.1E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21370 7459c4a5d879d50a6652bc6419387ba8 498 PANTHER PTHR32204 7 497 5.5E-148 T 22-04-2016 APECO1_RS21370 7459c4a5d879d50a6652bc6419387ba8 498 SUPERFAMILY SSF52540 12 264 3.18E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21370 7459c4a5d879d50a6652bc6419387ba8 498 SMART SM00382 38 187 1.6E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS21370 7459c4a5d879d50a6652bc6419387ba8 498 Hamap MF_01625 ATPase RavA [ravA]. 1 498 58.993 T 22-04-2016 IPR023671 ATPase RavA GO:0005737|GO:0016887 APECO1_RS13230 7a8bd9eea98340aab78364de3a9d2175 458 SUPERFAMILY SSF48024 3 102 6.93E-14 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APECO1_RS13230 7a8bd9eea98340aab78364de3a9d2175 458 Pfam PF00772 DnaB-like helicase N terminal domain 3 95 1.3E-12 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APECO1_RS13230 7a8bd9eea98340aab78364de3a9d2175 458 Gene3D G3DSA:3.40.50.300 156 423 4.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS13230 7a8bd9eea98340aab78364de3a9d2175 458 Pfam PF03796 DnaB-like helicase C terminal domain 171 423 3.0E-77 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 APECO1_RS13230 7a8bd9eea98340aab78364de3a9d2175 458 SMART SM00382 187 412 0.0098 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS13230 7a8bd9eea98340aab78364de3a9d2175 458 Gene3D G3DSA:1.10.860.10 4 95 3.9E-12 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APECO1_RS13230 7a8bd9eea98340aab78364de3a9d2175 458 PANTHER PTHR30153 4 434 4.4E-98 T 22-04-2016 APECO1_RS13230 7a8bd9eea98340aab78364de3a9d2175 458 SUPERFAMILY SSF52540 170 424 2.39E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 SMART SM00487 28 234 1.4E-52 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 Gene3D G3DSA:3.40.50.300 232 386 1.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 Pfam PF00271 Helicase conserved C-terminal domain 243 351 3.1E-28 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 PANTHER PTHR24031:SF173 1 421 2.0E-283 T 22-04-2016 APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 Gene3D G3DSA:3.40.50.300 8 231 3.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 Pfam PF00270 DEAD/DEAH box helicase 33 206 2.3E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 PANTHER PTHR24031 1 421 2.0E-283 T 22-04-2016 APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.868 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 SUPERFAMILY SSF52540 84 363 4.68E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21520 9e62102c3fed86ead29103fc484a13af 421 SMART SM00490 270 351 8.2E-31 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS09125 12ed670c8b9818e65696cd98b68801a5 97 PIRSF PIRSF036548 3 97 1.9E-37 T 22-04-2016 IPR012206 Ferredoxin-like, FixX GO:0005506 APECO1_RS09125 12ed670c8b9818e65696cd98b68801a5 97 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS09125 12ed670c8b9818e65696cd98b68801a5 97 SUPERFAMILY SSF54862 42 92 2.7E-8 T 22-04-2016 APECO1_RS09125 12ed670c8b9818e65696cd98b68801a5 97 PANTHER PTHR10617:SF112 1 82 1.2E-63 T 22-04-2016 APECO1_RS09125 12ed670c8b9818e65696cd98b68801a5 97 Gene3D G3DSA:3.30.70.20 42 78 9.0E-6 T 22-04-2016 APECO1_RS09125 12ed670c8b9818e65696cd98b68801a5 97 PANTHER PTHR10617 1 82 1.2E-63 T 22-04-2016 APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 PANTHER PTHR24220 5 295 4.7E-166 T 22-04-2016 APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 Gene3D G3DSA:3.40.50.300 3 235 5.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 Pfam PF00005 ABC transporter 21 162 2.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 PANTHER PTHR24220:SF151 5 295 4.7E-166 T 22-04-2016 APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 SUPERFAMILY SSF52540 4 243 3.64E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 Pfam PF08402 TOBE domain 281 351 1.1E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 Gene3D G3DSA:2.40.50.140 286 344 1.2E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 SUPERFAMILY SSF50331 237 359 7.05E-28 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 Gene3D G3DSA:2.40.50.100 345 359 4.1E-20 T 22-04-2016 APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 Gene3D G3DSA:2.40.50.100 240 285 4.1E-20 T 22-04-2016 APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS07295 b1980a73a0a73f7f0ca72af9e96e827f 360 SMART SM00382 29 219 6.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 PANTHER PTHR11751 121 139 2.5E-16 T 22-04-2016 APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 PANTHER PTHR11751 33 102 2.5E-16 T 22-04-2016 APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 SMART SM00345 36 95 2.3E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 Pfam PF07729 FCD domain 125 246 3.4E-20 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 95 9.5E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 Gene3D G3DSA:1.20.120.530 117 258 1.5E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 SMART SM00895 123 247 1.0E-16 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 Gene3D G3DSA:1.10.10.10 29 102 2.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 5.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 5.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 SUPERFAMILY SSF46785 28 99 3.8E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 SUPERFAMILY SSF48008 120 252 4.18E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS18545 98ef6d7f195026ab846b6fddb1407773 263 Hamap MF_01236 Transcriptional regulator NanR [nanR]. 4 263 59.781 T 22-04-2016 IPR023730 Transcriptional regulator NanR APECO1_RS25605 f461a173cff87b17162b1764f384757a 94 PANTHER PTHR36511:SF2 1 92 1.4E-34 T 22-04-2016 APECO1_RS25605 f461a173cff87b17162b1764f384757a 94 SMART SM00530 34 88 1.8E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS25605 f461a173cff87b17162b1764f384757a 94 Pfam PF01381 Helix-turn-helix 35 79 1.5E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS25605 f461a173cff87b17162b1764f384757a 94 SUPERFAMILY SSF47413 35 82 1.18E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS25605 f461a173cff87b17162b1764f384757a 94 Gene3D G3DSA:1.10.260.40 34 85 7.8E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS25605 f461a173cff87b17162b1764f384757a 94 PANTHER PTHR36511 1 92 1.4E-34 T 22-04-2016 APECO1_RS18645 bf4261e3f361fd60412d60414a7bbaf5 197 PANTHER PTHR11746 119 187 4.2E-19 T 22-04-2016 APECO1_RS18645 bf4261e3f361fd60412d60414a7bbaf5 197 SUPERFAMILY SSF52972 2 184 1.11E-63 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APECO1_RS18645 bf4261e3f361fd60412d60414a7bbaf5 197 PIRSF PIRSF006305 1 191 2.5E-57 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APECO1_RS18645 bf4261e3f361fd60412d60414a7bbaf5 197 Gene3D G3DSA:3.90.950.10 2 185 4.6E-72 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APECO1_RS18645 bf4261e3f361fd60412d60414a7bbaf5 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.7E-75 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APECO1_RS18645 bf4261e3f361fd60412d60414a7bbaf5 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.971 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APECO1_RS18645 bf4261e3f361fd60412d60414a7bbaf5 197 Pfam PF02545 Maf-like protein 4 184 3.0E-59 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APECO1_RS12840 64c47a44fefdd67a0dc725472ab6d306 189 SUPERFAMILY SSF52507 2 178 2.88E-59 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APECO1_RS12840 64c47a44fefdd67a0dc725472ab6d306 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 3.0E-70 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APECO1_RS12840 64c47a44fefdd67a0dc725472ab6d306 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 37.006 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APECO1_RS12840 64c47a44fefdd67a0dc725472ab6d306 189 Pfam PF02441 Flavoprotein 2 127 1.6E-26 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APECO1_RS12840 64c47a44fefdd67a0dc725472ab6d306 189 Gene3D G3DSA:3.40.50.1950 2 188 1.6E-77 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APECO1_RS12840 64c47a44fefdd67a0dc725472ab6d306 189 PANTHER PTHR30108:SF10 2 188 2.6E-127 T 22-04-2016 APECO1_RS12840 64c47a44fefdd67a0dc725472ab6d306 189 PANTHER PTHR30108 2 188 2.6E-127 T 22-04-2016 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 277 4.7E-71 T 22-04-2016 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 Gene3D G3DSA:3.40.190.10 131 221 1.2E-11 T 22-04-2016 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 291 8.8E-113 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 SUPERFAMILY SSF53850 54 244 1.61E-44 T 22-04-2016 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 Gene3D G3DSA:3.40.190.10 55 130 1.1E-4 T 22-04-2016 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 3 254 4.0E-94 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 PANTHER PTHR30043 172 278 4.4E-198 T 22-04-2016 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 PANTHER PTHR30043 297 338 4.4E-198 T 22-04-2016 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 PANTHER PTHR30043 1 139 4.4E-198 T 22-04-2016 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 PANTHER PTHR30043:SF4 172 278 4.4E-198 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 PANTHER PTHR30043:SF4 297 338 4.4E-198 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 APECO1_RS23500 68952e880aed857a83e3de3fd1135321 338 PANTHER PTHR30043:SF4 1 139 4.4E-198 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 SMART SM00530 6 62 6.9E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 SUPERFAMILY SSF47413 6 59 4.15E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 Gene3D G3DSA:3.40.50.300 231 400 2.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 2.4E-166 T 22-04-2016 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 Gene3D G3DSA:3.40.50.620 63 230 2.9E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 SUPERFAMILY SSF52540 232 386 7.49E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 PANTHER PTHR37512 14 410 2.6E-154 T 22-04-2016 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 Gene3D G3DSA:1.10.260.40 5 58 1.7E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 SUPERFAMILY SSF52374 66 229 1.66E-18 T 22-04-2016 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 Pfam PF13521 AAA domain 234 394 4.3E-31 T 22-04-2016 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 Pfam PF01381 Helix-turn-helix 7 59 3.6E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 PIRSF PIRSF004776 2 410 4.0E-214 T 22-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 APECO1_RS25595 73779966da8cdcea287876e7b73c7d90 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 5.3E-20 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APECO1_RS12255 96c7356b0885fe2c3a3de0777c744eab 350 Pfam PF03918 Cytochrome C biogenesis protein 7 128 9.7E-51 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family APECO1_RS12255 96c7356b0885fe2c3a3de0777c744eab 350 PANTHER PTHR30009:SF10 149 340 9.2E-56 T 22-04-2016 APECO1_RS12255 96c7356b0885fe2c3a3de0777c744eab 350 Gene3D G3DSA:1.25.40.10 156 258 1.9E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS12255 96c7356b0885fe2c3a3de0777c744eab 350 SUPERFAMILY SSF48452 218 327 2.04E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS12255 96c7356b0885fe2c3a3de0777c744eab 350 PANTHER PTHR30009 149 340 9.2E-56 T 22-04-2016 APECO1_RS12255 96c7356b0885fe2c3a3de0777c744eab 350 Gene3D G3DSA:1.25.40.10 259 343 1.2E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS06330 a3e1456bf6aacadba34986ed013cbc40 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS06330 a3e1456bf6aacadba34986ed013cbc40 252 Pfam PF00005 ABC transporter 19 167 2.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS06330 a3e1456bf6aacadba34986ed013cbc40 252 SMART SM00382 28 216 2.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS06330 a3e1456bf6aacadba34986ed013cbc40 252 PANTHER PTHR24220 5 245 2.1E-84 T 22-04-2016 APECO1_RS06330 a3e1456bf6aacadba34986ed013cbc40 252 PANTHER PTHR24220:SF582 5 245 2.1E-84 T 22-04-2016 APECO1_RS06330 a3e1456bf6aacadba34986ed013cbc40 252 Gene3D G3DSA:3.40.50.300 3 233 2.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06330 a3e1456bf6aacadba34986ed013cbc40 252 SUPERFAMILY SSF52540 8 221 2.72E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01695 acecae10d42c15e3f02014758582c20e 310 Gene3D G3DSA:3.40.190.10 183 259 8.7E-4 T 22-04-2016 APECO1_RS01695 acecae10d42c15e3f02014758582c20e 310 Pfam PF03466 LysR substrate binding domain 91 280 1.2E-19 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS01695 acecae10d42c15e3f02014758582c20e 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 4.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01695 acecae10d42c15e3f02014758582c20e 310 SUPERFAMILY SSF53850 91 293 3.44E-19 T 22-04-2016 APECO1_RS01695 acecae10d42c15e3f02014758582c20e 310 PANTHER PTHR30126:SF18 4 277 1.9E-123 T 22-04-2016 APECO1_RS01695 acecae10d42c15e3f02014758582c20e 310 Gene3D G3DSA:1.10.10.10 9 89 9.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01695 acecae10d42c15e3f02014758582c20e 310 SUPERFAMILY SSF46785 8 91 6.24E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01695 acecae10d42c15e3f02014758582c20e 310 Gene3D G3DSA:3.40.190.10 107 182 2.2E-6 T 22-04-2016 APECO1_RS01695 acecae10d42c15e3f02014758582c20e 310 PANTHER PTHR30126 4 277 1.9E-123 T 22-04-2016 APECO1_RS04920 b39bfa938221d3624fb3e59b2337251e 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 3.8E-35 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 APECO1_RS04920 b39bfa938221d3624fb3e59b2337251e 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 9.3E-19 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 APECO1_RS04920 b39bfa938221d3624fb3e59b2337251e 105 SMART SM00992 3 102 3.3E-33 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 APECO1_RS04920 b39bfa938221d3624fb3e59b2337251e 105 PANTHER PTHR31350:SF6 1 90 2.6E-28 T 22-04-2016 APECO1_RS04920 b39bfa938221d3624fb3e59b2337251e 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 37.369 T 22-04-2016 IPR022866 Heat shock protein HspQ APECO1_RS04920 b39bfa938221d3624fb3e59b2337251e 105 SUPERFAMILY SSF141255 4 95 7.06E-30 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 APECO1_RS04920 b39bfa938221d3624fb3e59b2337251e 105 PANTHER PTHR31350 1 90 2.6E-28 T 22-04-2016 APECO1_RS06390 ed402733be04ca84f7ab3f7de2420112 550 PANTHER PTHR11814:SF112 1 550 7.0E-290 T 22-04-2016 APECO1_RS06390 ed402733be04ca84f7ab3f7de2420112 550 Gene3D G3DSA:3.30.750.24 444 548 1.8E-12 T 22-04-2016 IPR002645 STAS domain APECO1_RS06390 ed402733be04ca84f7ab3f7de2420112 550 ProSitePatterns PS01130 SLC26A transporters signature. 49 70 - T 22-04-2016 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 APECO1_RS06390 ed402733be04ca84f7ab3f7de2420112 550 Pfam PF00916 Sulfate permease family 20 402 1.5E-75 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APECO1_RS06390 ed402733be04ca84f7ab3f7de2420112 550 SUPERFAMILY SSF52091 443 548 1.04E-14 T 22-04-2016 IPR002645 STAS domain APECO1_RS06390 ed402733be04ca84f7ab3f7de2420112 550 Pfam PF01740 STAS domain 444 544 9.0E-12 T 22-04-2016 IPR002645 STAS domain APECO1_RS06390 ed402733be04ca84f7ab3f7de2420112 550 TIGRFAM TIGR00815 sulP: sulfate permease 9 546 1.6E-150 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APECO1_RS06390 ed402733be04ca84f7ab3f7de2420112 550 PANTHER PTHR11814 1 550 7.0E-290 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APECO1_RS21685 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 SUPERFAMILY SSF54506 2 273 1.02E-56 T 22-04-2016 APECO1_RS21685 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 6.5E-105 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS21685 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 PANTHER PTHR31689 1 272 7.6E-143 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS21685 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.819 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS21685 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Pfam PF01678 Diaminopimelate epimerase 3 123 6.2E-35 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS21685 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Pfam PF01678 Diaminopimelate epimerase 152 267 4.6E-35 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS21685 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Gene3D G3DSA:3.10.310.10 1 120 4.8E-50 T 22-04-2016 APECO1_RS21685 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 Gene3D G3DSA:3.10.310.10 121 262 9.3E-53 T 22-04-2016 APECO1_RS21685 8a2d9e50c5c8f8c6aa8d3d35d6818e19 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APECO1_RS18300 4065641b410de42ba87d75d453d9c75c 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 24.786 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APECO1_RS18300 4065641b410de42ba87d75d453d9c75c 150 Gene3D G3DSA:2.30.30.180 87 147 1.3E-13 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APECO1_RS18300 4065641b410de42ba87d75d453d9c75c 150 PANTHER PTHR33867 1 150 4.9E-60 T 22-04-2016 APECO1_RS18300 4065641b410de42ba87d75d453d9c75c 150 PANTHER PTHR33867:SF1 1 150 4.9E-60 T 22-04-2016 APECO1_RS18300 4065641b410de42ba87d75d453d9c75c 150 SUPERFAMILY SSF75420 3 82 4.45E-25 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APECO1_RS18300 4065641b410de42ba87d75d453d9c75c 150 Pfam PF02576 Putative ribosome maturation factor RimP 12 146 6.8E-49 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APECO1_RS18300 4065641b410de42ba87d75d453d9c75c 150 SUPERFAMILY SSF74942 83 150 3.4E-17 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APECO1_RS18300 4065641b410de42ba87d75d453d9c75c 150 Gene3D G3DSA:3.30.300.70 2 79 2.6E-33 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APECO1_RS17635 857df4aa66b29c75b83187b310efeb96 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 7.0E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS17635 857df4aa66b29c75b83187b310efeb96 713 Gene3D G3DSA:2.170.130.10 49 176 1.9E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS17635 857df4aa66b29c75b83187b310efeb96 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 73 713 6.0E-112 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APECO1_RS17635 857df4aa66b29c75b83187b310efeb96 713 PANTHER PTHR32552 38 713 3.8E-219 T 22-04-2016 APECO1_RS17635 857df4aa66b29c75b83187b310efeb96 713 PANTHER PTHR32552:SF6 38 713 3.8E-219 T 22-04-2016 APECO1_RS17635 857df4aa66b29c75b83187b310efeb96 713 Pfam PF00593 TonB dependent receptor 475 711 7.4E-35 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS17635 857df4aa66b29c75b83187b310efeb96 713 SUPERFAMILY SSF56935 36 713 2.09E-127 T 22-04-2016 APECO1_RS17635 857df4aa66b29c75b83187b310efeb96 713 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 696 713 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APECO1_RS17635 857df4aa66b29c75b83187b310efeb96 713 Gene3D G3DSA:2.40.170.20 183 713 9.3E-145 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS11970 0fce27d4f1889da18e5823320779c3b7 316 PIRSF PIRSF006621 1 315 2.5E-83 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS11970 0fce27d4f1889da18e5823320779c3b7 316 PANTHER PTHR11082:SF26 1 311 7.8E-203 T 22-04-2016 APECO1_RS11970 0fce27d4f1889da18e5823320779c3b7 316 PANTHER PTHR11082 1 311 7.8E-203 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS11970 0fce27d4f1889da18e5823320779c3b7 316 Gene3D G3DSA:3.20.20.70 2 240 2.5E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS11970 0fce27d4f1889da18e5823320779c3b7 316 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.002 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 APECO1_RS11970 0fce27d4f1889da18e5823320779c3b7 316 SUPERFAMILY SSF51395 1 302 8.61E-71 T 22-04-2016 APECO1_RS11970 0fce27d4f1889da18e5823320779c3b7 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS11970 0fce27d4f1889da18e5823320779c3b7 316 Pfam PF01207 Dihydrouridine synthase (Dus) 5 306 3.8E-96 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 19 823 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 SMART SM00490 245 343 4.8E-13 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 Pfam PF08482 ATP-dependent helicase C-terminal 679 811 3.1E-54 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 PIRSF PIRSF005496 14 824 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 Gene3D G3DSA:3.40.50.300 200 359 2.5E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 Gene3D G3DSA:3.40.50.300 18 175 7.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 SMART SM00487 14 201 8.9E-22 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 Pfam PF00271 Helicase conserved C-terminal domain 223 342 5.6E-10 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 Pfam PF00270 DEAD/DEAH box helicase 27 178 2.7E-10 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 SMART SM00847 403 491 2.2E-12 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 SUPERFAMILY SSF52540 21 446 1.77E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 Pfam PF04408 Helicase associated domain (HA2) 404 459 1.3E-9 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 APECO1_RS00800 75eb1a970063a85bc37dc37f1988cc78 824 PANTHER PTHR18934 18 442 5.7E-156 T 22-04-2016 APECO1_RS20400 675678ed15c3e500584ca420074d8870 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 46 3.0E-20 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS20400 675678ed15c3e500584ca420074d8870 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 4.7E-13 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS20400 675678ed15c3e500584ca420074d8870 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 4.7E-13 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS20400 675678ed15c3e500584ca420074d8870 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 22-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 APECO1_RS20400 675678ed15c3e500584ca420074d8870 50 Pfam PF01848 Hok/gef family 5 46 2.5E-22 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 Gene3D G3DSA:3.40.228.10 152 261 1.3E-71 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 Gene3D G3DSA:3.40.228.10 1 108 1.3E-71 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 Gene3D G3DSA:2.40.40.20 605 804 8.5E-49 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615:SF149 574 647 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615:SF149 668 804 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615:SF149 1 182 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615:SF149 397 481 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615:SF149 286 380 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615:SF149 210 247 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 Pfam PF00384 Molybdopterin oxidoreductase 2 378 1.5E-20 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 Pfam PF01568 Molydopterin dinucleotide binding domain 682 797 3.4E-16 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 803 0.0 T 22-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615 574 647 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615 668 804 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615 1 182 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615 397 481 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615 286 380 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 PANTHER PTHR11615 210 247 0.0 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 SUPERFAMILY SSF53706 1 639 5.76E-231 T 22-04-2016 APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 SUPERFAMILY SSF50692 675 804 2.07E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 SUPERFAMILY SSF50692 624 648 2.07E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS22230 b8f698fdb02e5708cd8743711bf52059 804 Gene3D G3DSA:3.40.50.740 320 470 3.4E-58 T 22-04-2016 APECO1_RS00045 13f3c35a9df55b8e0032f2564af2a00c 317 SUPERFAMILY SSF51569 1 316 5.05E-118 T 22-04-2016 APECO1_RS00045 13f3c35a9df55b8e0032f2564af2a00c 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 1.5E-167 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS00045 13f3c35a9df55b8e0032f2564af2a00c 317 Pfam PF00923 Transaldolase 14 313 7.1E-103 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS00045 13f3c35a9df55b8e0032f2564af2a00c 317 PANTHER PTHR10683 1 313 1.4E-178 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS00045 13f3c35a9df55b8e0032f2564af2a00c 317 PANTHER PTHR10683:SF18 1 313 1.4E-178 T 22-04-2016 APECO1_RS00045 13f3c35a9df55b8e0032f2564af2a00c 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.598 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS00045 13f3c35a9df55b8e0032f2564af2a00c 317 Gene3D G3DSA:3.20.20.70 3 315 1.9E-134 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS00045 13f3c35a9df55b8e0032f2564af2a00c 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS00045 13f3c35a9df55b8e0032f2564af2a00c 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 PANTHER PTHR12725:SF63 4 188 1.8E-52 T 22-04-2016 APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 184 4.1E-21 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 50 184 8.8E-13 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 SUPERFAMILY SSF56784 3 194 4.21E-45 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 Gene3D G3DSA:1.10.150.240 17 81 4.4E-36 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.1E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 3.1E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 3.1E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.1E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 PANTHER PTHR12725 4 188 1.8E-52 T 22-04-2016 APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 Gene3D G3DSA:3.40.50.1000 83 196 4.7E-36 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS22165 5fc111bbeaee0080b409b15e2ec57e7c 199 Gene3D G3DSA:3.40.50.1000 3 16 4.7E-36 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS09270 f11f1c5addf6fff4a3cda70723959ef2 196 PANTHER PTHR35531 1 194 2.1E-69 T 22-04-2016 APECO1_RS09270 f11f1c5addf6fff4a3cda70723959ef2 196 PIRSF PIRSF030780 1 195 1.6E-126 T 22-04-2016 IPR016956 Inner membrane protein YdjM APECO1_RS09270 f11f1c5addf6fff4a3cda70723959ef2 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 2.9E-34 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase APECO1_RS09270 f11f1c5addf6fff4a3cda70723959ef2 196 PANTHER PTHR35531:SF1 1 194 2.1E-69 T 22-04-2016 APECO1_RS05855 89ae249bd7427075d57d2d471efff850 71 Gene3D G3DSA:1.10.260.40 2 67 3.4E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS05855 89ae249bd7427075d57d2d471efff850 71 SUPERFAMILY SSF47413 3 52 3.05E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS05855 89ae249bd7427075d57d2d471efff850 71 Pfam PF01381 Helix-turn-helix 4 52 6.9E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS05855 89ae249bd7427075d57d2d471efff850 71 SMART SM00530 3 58 1.6E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 Pfam PF01979 Amidohydrolase family 15 307 8.0E-22 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 PANTHER PTHR11647:SF59 8 334 2.4E-156 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 63.333 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 PIRSF PIRSF001237 4 348 2.0E-141 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 Gene3D G3DSA:3.20.20.140 6 347 2.5E-134 T 22-04-2016 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 8.8E-168 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 PANTHER PTHR11647 8 334 2.4E-156 T 22-04-2016 APECO1_RS05360 a5867551cfcf15330f798bcb2a76647b 348 SUPERFAMILY SSF51556 8 347 5.26E-149 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS10540 46e422f638f6cae33618874fa121f733 686 Gene3D G3DSA:2.60.40.1120 5 81 8.2E-7 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain APECO1_RS10540 46e422f638f6cae33618874fa121f733 686 SUPERFAMILY SSF49464 5 81 3.57E-6 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APECO1_RS10540 46e422f638f6cae33618874fa121f733 686 Pfam PF08400 Prophage tail fibre N-terminal 1 131 6.5E-69 T 22-04-2016 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal APECO1_RS10540 46e422f638f6cae33618874fa121f733 686 PANTHER PTHR35191 2 218 2.3E-39 T 22-04-2016 APECO1_RS10540 46e422f638f6cae33618874fa121f733 686 Gene3D G3DSA:2.60.120.200 528 684 1.4E-7 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APECO1_RS10540 46e422f638f6cae33618874fa121f733 686 SUPERFAMILY SSF49899 533 684 2.71E-6 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APECO1_RS06065 46e422f638f6cae33618874fa121f733 686 Gene3D G3DSA:2.60.40.1120 5 81 8.2E-7 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain APECO1_RS06065 46e422f638f6cae33618874fa121f733 686 SUPERFAMILY SSF49464 5 81 3.57E-6 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APECO1_RS06065 46e422f638f6cae33618874fa121f733 686 Pfam PF08400 Prophage tail fibre N-terminal 1 131 6.5E-69 T 22-04-2016 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal APECO1_RS06065 46e422f638f6cae33618874fa121f733 686 PANTHER PTHR35191 2 218 2.3E-39 T 22-04-2016 APECO1_RS06065 46e422f638f6cae33618874fa121f733 686 Gene3D G3DSA:2.60.120.200 528 684 1.4E-7 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APECO1_RS06065 46e422f638f6cae33618874fa121f733 686 SUPERFAMILY SSF49899 533 684 2.71E-6 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APECO1_RS19920 044ddba053477e65f227875e9fad2ea1 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 271 1.9E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19920 044ddba053477e65f227875e9fad2ea1 277 PANTHER PTHR30465 13 273 1.1E-91 T 22-04-2016 APECO1_RS19920 044ddba053477e65f227875e9fad2ea1 277 SUPERFAMILY SSF161098 66 255 4.41E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19920 044ddba053477e65f227875e9fad2ea1 277 PANTHER PTHR30465:SF2 13 273 1.1E-91 T 22-04-2016 APECO1_RS19920 044ddba053477e65f227875e9fad2ea1 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 12 268 9.6E-120 T 22-04-2016 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 478 598 1.4E-44 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 SUPERFAMILY SSF51261 475 622 1.27E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 Pfam PF02378 Phosphotransferase system, EIIC 106 389 3.9E-29 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 Gene3D G3DSA:2.70.70.10 477 623 3.5E-56 T 22-04-2016 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 622 4.3E-213 T 22-04-2016 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 Pfam PF00367 phosphotransferase system, EIIB 7 38 9.6E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 PANTHER PTHR30175 3 573 0.0 T 22-04-2016 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 26 106 1.8E-14 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 540 552 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 17 34 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 148 433 7.7E-88 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 PANTHER PTHR30175:SF1 3 573 0.0 T 22-04-2016 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 478 601 2.2E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 SUPERFAMILY SSF55604 4 77 1.96E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS21250 6494ada35f2a03736e3f0fbfe0ffa4d6 624 Gene3D G3DSA:3.30.1360.60 2 79 4.4E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS11160 248235a66c5342a26344114c212f3159 37 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 8 37 1.1E-9 T 22-04-2016 IPR009301 Protein of unknown function DUF957 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 SMART SM00382 207 350 1.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 Gene3D G3DSA:3.30.450.40 7 167 2.1E-16 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 PANTHER PTHR32071:SF35 186 502 2.1E-214 T 22-04-2016 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 Pfam PF01590 GAF domain 23 154 2.0E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 PANTHER PTHR32071 186 502 2.1E-214 T 22-04-2016 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 SMART SM00065 20 167 1.3E-20 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 Pfam PF00158 Sigma-54 interaction domain 187 353 4.8E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 Gene3D G3DSA:1.10.8.60 360 410 5.2E-18 T 22-04-2016 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 Gene3D G3DSA:1.10.10.60 411 502 1.3E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 SUPERFAMILY SSF46689 451 502 6.72E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 SUPERFAMILY SSF52540 187 421 2.57E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 SUPERFAMILY SSF55781 22 170 1.37E-17 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 503 61.617 T 22-04-2016 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 UniPathway: UPA00638 APECO1_RS15420 3abb6f3add89001f533f792e2684c2cb 504 Gene3D G3DSA:3.40.50.300 184 359 4.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 28 7.3E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 2.0E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 PANTHER PTHR30093:SF9 1 141 6.9E-74 T 22-04-2016 APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 1.3E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 1.3E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 8 138 3.0E-55 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 SUPERFAMILY SSF54523 35 140 4.13E-38 T 22-04-2016 APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 Gene3D G3DSA:3.30.700.10 10 74 6.5E-10 T 22-04-2016 APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 PANTHER PTHR30093 1 141 6.9E-74 T 22-04-2016 APECO1_RS19115 bc1dc24fab86562c3462933fd74e04c8 145 Pfam PF08334 Type II secretion system (T2SS), protein G 32 138 1.4E-37 T 22-04-2016 IPR013545 Type II secretion system protein G APECO1_RS07990 e483a204d9e67b61f5154d780c4b5e08 468 SUPERFAMILY SSF53383 91 466 6.05E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS07990 e483a204d9e67b61f5154d780c4b5e08 468 Gene3D G3DSA:3.40.640.10 144 356 1.6E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS07990 e483a204d9e67b61f5154d780c4b5e08 468 Gene3D G3DSA:1.10.10.10 1 67 1.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07990 e483a204d9e67b61f5154d780c4b5e08 468 SUPERFAMILY SSF46785 2 75 4.08E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07990 e483a204d9e67b61f5154d780c4b5e08 468 PANTHER PTHR11751:SF314 84 466 4.3E-208 T 22-04-2016 APECO1_RS07990 e483a204d9e67b61f5154d780c4b5e08 468 PANTHER PTHR11751 84 466 4.3E-208 T 22-04-2016 APECO1_RS07990 e483a204d9e67b61f5154d780c4b5e08 468 Pfam PF00155 Aminotransferase class I and II 145 445 8.9E-32 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS07990 e483a204d9e67b61f5154d780c4b5e08 468 SMART SM00345 7 66 1.9E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS07990 e483a204d9e67b61f5154d780c4b5e08 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.4E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 Gene3D G3DSA:3.40.640.10 43 309 2.1E-93 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 SUPERFAMILY SSF53383 5 403 1.07E-132 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 1 402 1.2E-178 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 PANTHER PTHR11986:SF8 1 410 1.7E-213 T 22-04-2016 APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 Gene3D G3DSA:3.90.1150.10 313 404 1.8E-53 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 Gene3D G3DSA:3.90.1150.10 1 42 1.8E-53 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 Pfam PF00202 Aminotransferase class-III 8 401 3.2E-132 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 PANTHER PTHR11986 1 410 1.7E-213 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS03745 da07f81ed3a73a3f3519d4d498041b1c 410 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 405 48.358 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 APECO1_RS13620 e4954e4ca6f0054f855bffc75db879ce 122 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 1 107 3.0E-58 T 22-04-2016 APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 44.983 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 1.4E-117 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 SMART SM00518 3 279 5.1E-146 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 PANTHER PTHR21445:SF0 1 282 6.4E-158 T 22-04-2016 APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 PANTHER PTHR21445 1 282 6.4E-158 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 SUPERFAMILY SSF51658 1 277 1.44E-104 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 5.2E-44 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 Gene3D G3DSA:3.20.20.150 1 278 1.1E-121 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 APECO1_RS12080 9f9a3f4f7211988868b62611daf50c46 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 APECO1_RS07365 20a7224aa69d08dc5778aaf39ef54940 343 SUPERFAMILY SSF50182 162 228 6.87E-18 T 22-04-2016 IPR010920 LSM domain APECO1_RS07365 20a7224aa69d08dc5778aaf39ef54940 343 Gene3D G3DSA:2.30.30.60 178 228 9.6E-16 T 22-04-2016 APECO1_RS07365 20a7224aa69d08dc5778aaf39ef54940 343 SUPERFAMILY SSF82861 79 160 1.96E-10 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APECO1_RS07365 20a7224aa69d08dc5778aaf39ef54940 343 PANTHER PTHR30566 21 343 3.3E-103 T 22-04-2016 APECO1_RS07365 20a7224aa69d08dc5778aaf39ef54940 343 SUPERFAMILY SSF82689 231 335 8.37E-22 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APECO1_RS07365 20a7224aa69d08dc5778aaf39ef54940 343 Gene3D G3DSA:3.30.70.100 233 321 2.7E-16 T 22-04-2016 APECO1_RS07365 20a7224aa69d08dc5778aaf39ef54940 343 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 194 228 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APECO1_RS07365 20a7224aa69d08dc5778aaf39ef54940 343 Pfam PF00924 Mechanosensitive ion channel 120 323 8.4E-64 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APECO1_RS14210 ac6d2371bf486ef895c0e3e4002b317a 219 Pfam PF00149 Calcineurin-like phosphoesterase 14 187 5.6E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS14210 ac6d2371bf486ef895c0e3e4002b317a 219 PANTHER PTHR24032 1 218 2.3E-57 T 22-04-2016 APECO1_RS14210 ac6d2371bf486ef895c0e3e4002b317a 219 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 72 77 - T 22-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 APECO1_RS14210 ac6d2371bf486ef895c0e3e4002b317a 219 Gene3D G3DSA:3.60.21.10 13 218 1.8E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS14210 ac6d2371bf486ef895c0e3e4002b317a 219 PANTHER PTHR24032:SF33 1 218 2.3E-57 T 22-04-2016 APECO1_RS14210 ac6d2371bf486ef895c0e3e4002b317a 219 SUPERFAMILY SSF56300 14 217 5.63E-47 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 6.1E-24 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 6.1E-24 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 6.1E-24 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 6.1E-24 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.8E-114 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 SUPERFAMILY SSF55920 3 255 4.32E-93 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 PANTHER PTHR10804 1 260 9.5E-190 T 22-04-2016 APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 PANTHER PTHR10804:SF75 1 260 9.5E-190 T 22-04-2016 APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 44.081 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 Gene3D G3DSA:3.90.230.10 3 259 1.5E-102 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 Pfam PF00557 Metallopeptidase family M24 12 242 6.1E-54 T 22-04-2016 IPR000994 Peptidase M24, structural domain APECO1_RS00890 c168653e3c8d2bb35f52032fea2ce506 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APECO1_RS19010 1a6377b3ef5b5fc6796affa39279224a 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.826 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19010 1a6377b3ef5b5fc6796affa39279224a 179 SUPERFAMILY SSF55282 4 179 2.35E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain APECO1_RS19010 1a6377b3ef5b5fc6796affa39279224a 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19010 1a6377b3ef5b5fc6796affa39279224a 179 PIRSF PIRSF002161 1 179 1.5E-66 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19010 1a6377b3ef5b5fc6796affa39279224a 179 Gene3D G3DSA:3.30.1440.10 2 179 7.2E-81 T 22-04-2016 IPR022803 Ribosomal protein L5 domain APECO1_RS19010 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.0E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal APECO1_RS19010 1a6377b3ef5b5fc6796affa39279224a 179 Pfam PF00281 Ribosomal protein L5 24 80 9.4E-29 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal APECO1_RS19010 1a6377b3ef5b5fc6796affa39279224a 179 PANTHER PTHR11994 1 178 1.2E-103 T 22-04-2016 APECO1_RS18200 635a1be656ecebc7ea54e97525682ec9 346 Pfam PF03773 Predicted permease 72 340 2.5E-29 T 22-04-2016 IPR005524 Predicted permease DUF318 APECO1_RS18200 635a1be656ecebc7ea54e97525682ec9 346 Pfam PF03773 Predicted permease 57 151 2.0E-12 T 22-04-2016 IPR005524 Predicted permease DUF318 APECO1_RS18200 635a1be656ecebc7ea54e97525682ec9 346 PANTHER PTHR34184 40 343 5.5E-139 T 22-04-2016 APECO1_RS18200 635a1be656ecebc7ea54e97525682ec9 346 PANTHER PTHR34184:SF3 40 343 5.5E-139 T 22-04-2016 APECO1_RS25100 4c86d2f5f17b8dfedf1e66966b0ec734 423 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 418 8.4E-107 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APECO1_RS25100 4c86d2f5f17b8dfedf1e66966b0ec734 423 PIRSF PIRSF006066 1 423 6.7E-125 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APECO1_RS25100 4c86d2f5f17b8dfedf1e66966b0ec734 423 PANTHER PTHR33362 1 422 2.1E-129 T 22-04-2016 APECO1_RS25100 4c86d2f5f17b8dfedf1e66966b0ec734 423 PANTHER PTHR33362:SF4 1 422 2.1E-129 T 22-04-2016 APECO1_RS25100 4c86d2f5f17b8dfedf1e66966b0ec734 423 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 422 2.5E-120 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APECO1_RS16155 055fc13b7e7913831fbb12d8b9a2c59d 135 Pfam PF10713 Protein of unknown function (DUF2509) 15 132 2.1E-32 T 22-04-2016 IPR019652 Protein of unknown function DUF2509 APECO1_RS15380 35aba7bb0c720b2d727bc9b18c712ebb 361 PANTHER PTHR30163 1 361 4.1E-220 T 22-04-2016 IPR011757 Lytic transglycosylase MltB APECO1_RS15380 35aba7bb0c720b2d727bc9b18c712ebb 361 Gene3D G3DSA:1.10.530.10 113 166 1.1E-58 T 22-04-2016 APECO1_RS15380 35aba7bb0c720b2d727bc9b18c712ebb 361 Gene3D G3DSA:1.10.530.10 247 356 1.1E-58 T 22-04-2016 APECO1_RS15380 35aba7bb0c720b2d727bc9b18c712ebb 361 SUPERFAMILY SSF53955 46 356 5.06E-103 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS15380 35aba7bb0c720b2d727bc9b18c712ebb 361 PANTHER PTHR30163:SF0 1 361 4.1E-220 T 22-04-2016 APECO1_RS15380 35aba7bb0c720b2d727bc9b18c712ebb 361 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 355 1.1E-130 T 22-04-2016 IPR011757 Lytic transglycosylase MltB APECO1_RS15380 35aba7bb0c720b2d727bc9b18c712ebb 361 Pfam PF13406 Transglycosylase SLT domain 57 353 3.0E-92 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 Pfam PF13377 Periplasmic binding protein-like domain 166 326 1.2E-40 T 22-04-2016 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 4.5E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 SUPERFAMILY SSF47413 1 56 4.02E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 Gene3D G3DSA:1.10.260.40 1 50 4.2E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 PANTHER PTHR30146 1 326 2.0E-242 T 22-04-2016 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 SUPERFAMILY SSF53822 58 326 4.71E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 SMART SM00354 1 68 9.8E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 Gene3D G3DSA:3.40.50.2300 51 173 4.6E-43 T 22-04-2016 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 PANTHER PTHR30146:SF38 1 326 2.0E-242 T 22-04-2016 APECO1_RS21405 83a93fdba599a771f425ec0da844abc1 327 Gene3D G3DSA:3.40.50.2300 174 303 3.3E-54 T 22-04-2016 APECO1_RS10230 33fb3d053aad10fe4b94b1aac17a4bd1 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 2.1E-36 T 22-04-2016 IPR019705 Protein of unknown function DUF2594 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 Pfam PF02911 Formyl transferase, C-terminal domain 202 294 4.2E-19 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 PIRSF PIRSF036506 1 660 0.0 T 22-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 Pfam PF00551 Formyl transferase 53 175 4.4E-24 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 Gene3D G3DSA:3.40.50.720 306 553 1.7E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 SUPERFAMILY SSF50486 204 304 1.73E-24 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 66.945 T 22-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 Gene3D G3DSA:3.40.50.170 1 199 4.1E-49 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 SUPERFAMILY SSF51735 317 652 2.38E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 Gene3D G3DSA:3.10.25.10 204 305 7.7E-24 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 2.1E-46 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 Gene3D G3DSA:3.90.25.10 570 641 3.7E-45 T 22-04-2016 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 PANTHER PTHR10366 317 659 1.9E-200 T 22-04-2016 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 PANTHER PTHR10366:SF253 317 659 1.9E-200 T 22-04-2016 APECO1_RS12570 c750bf8729dd6cdeb55dcda4ee84e0cc 660 SUPERFAMILY SSF53328 1 202 3.01E-54 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 SUPERFAMILY SSF52540 4 170 1.07E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 Gene3D G3DSA:3.40.50.300 2 172 1.4E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 Pfam PF01202 Shikimate kinase 13 170 9.7E-57 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.319 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 PANTHER PTHR21087 1 173 2.2E-73 T 22-04-2016 APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.5E-29 T 22-04-2016 APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.5E-29 T 22-04-2016 APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.5E-29 T 22-04-2016 APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.5E-29 T 22-04-2016 APECO1_RS19405 dee49c32c984d17a3904a2dc6dbfef34 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.5E-29 T 22-04-2016 APECO1_RS17285 a49e4f59a1e02d4f88895893aa385063 350 Gene3D G3DSA:1.10.45.10 324 346 9.4E-5 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APECO1_RS17285 a49e4f59a1e02d4f88895893aa385063 350 Pfam PF01565 FAD binding domain 13 136 1.2E-17 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APECO1_RS17285 a49e4f59a1e02d4f88895893aa385063 350 PANTHER PTHR11748:SF1 9 346 4.0E-121 T 22-04-2016 APECO1_RS17285 a49e4f59a1e02d4f88895893aa385063 350 SUPERFAMILY SSF56176 12 174 1.59E-30 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS17285 a49e4f59a1e02d4f88895893aa385063 350 PANTHER PTHR11748 9 346 4.0E-121 T 22-04-2016 APECO1_RS17285 a49e4f59a1e02d4f88895893aa385063 350 SUPERFAMILY SSF55103 134 346 2.75E-14 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APECO1_RS17285 a49e4f59a1e02d4f88895893aa385063 350 Gene3D G3DSA:3.30.465.10 53 174 3.0E-21 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 Gene3D G3DSA:1.10.1660.10 56 131 3.6E-25 T 22-04-2016 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 Gene3D G3DSA:1.10.1660.10 1 55 3.1E-23 T 22-04-2016 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.6E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.6E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.6E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 PANTHER PTHR30204 1 134 2.1E-86 T 22-04-2016 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 PANTHER PTHR30204:SF16 1 134 2.1E-86 T 22-04-2016 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 SMART SM00422 1 70 4.4E-30 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 SUPERFAMILY SSF46955 1 126 1.76E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 Pfam PF13411 MerR HTH family regulatory protein 1 66 6.0E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS02490 93273a8d3884c844995ff9341e533415 135 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.7E-62 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 APECO1_RS05975 1258ac303dfd1574db6ffe93df0d1679 68 Gene3D G3DSA:3.30.1580.10 1 67 1.7E-29 T 22-04-2016 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 APECO1_RS05975 1258ac303dfd1574db6ffe93df0d1679 68 Pfam PF02831 gpW 2 67 9.1E-20 T 22-04-2016 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 APECO1_RS05975 1258ac303dfd1574db6ffe93df0d1679 68 SUPERFAMILY SSF64210 1 58 4.32E-21 T 22-04-2016 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 APECO1_RS05975 1258ac303dfd1574db6ffe93df0d1679 68 ProDom PD019366 PROPHAGE HEAD JOINING GP3 COMPLETION HEAD-TO-TAIL W PROPHAGE-DERIVED DNA HEAD-TAIL 23 68 2.0E-19 T 22-04-2016 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 APECO1_RS09775 d922a4d0a3dc2483031b1aa12fe83d0c 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 21.379 T 22-04-2016 IPR020907 PhoP/PhoQ regulator MgrB APECO1_RS09775 d922a4d0a3dc2483031b1aa12fe83d0c 47 Pfam PF13998 MgrB protein 19 47 3.3E-16 T 22-04-2016 IPR020907 PhoP/PhoQ regulator MgrB APECO1_RS21350 315c3c6d1888c48ab72dc67845ee412f 147 PANTHER PTHR19384:SF81 1 147 5.7E-62 T 22-04-2016 APECO1_RS21350 315c3c6d1888c48ab72dc67845ee412f 147 PANTHER PTHR19384 1 147 5.7E-62 T 22-04-2016 APECO1_RS21350 315c3c6d1888c48ab72dc67845ee412f 147 Gene3D G3DSA:3.40.50.360 1 146 2.9E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS21350 315c3c6d1888c48ab72dc67845ee412f 147 SUPERFAMILY SSF52218 1 146 2.3E-37 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS21350 315c3c6d1888c48ab72dc67845ee412f 147 Pfam PF00258 Flavodoxin 7 138 2.0E-22 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APECO1_RS14860 12d51382c8fe2b3684bc7f82e0038417 42 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 APECO1_RS14860 12d51382c8fe2b3684bc7f82e0038417 42 Pfam PF00239 Resolvase, N terminal domain 3 40 6.3E-9 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APECO1_RS14860 12d51382c8fe2b3684bc7f82e0038417 42 SUPERFAMILY SSF53041 1 40 9.16E-11 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APECO1_RS14860 12d51382c8fe2b3684bc7f82e0038417 42 Gene3D G3DSA:3.40.50.1390 1 40 4.4E-12 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 SUPERFAMILY SSF103088 103 218 9.42E-39 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 Gene3D G3DSA:3.30.1330.60 103 216 1.2E-40 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01021 OMPA domain signature 116 138 1.6E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01021 OMPA domain signature 161 177 1.6E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01021 OMPA domain signature 146 161 1.6E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 Pfam PF00691 OmpA family 115 210 3.9E-23 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 Pfam PF13488 Glycine zipper 37 85 2.4E-12 T 22-04-2016 APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 PANTHER PTHR30128 15 219 7.3E-73 T 22-04-2016 APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 2.7E-6 T 22-04-2016 APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 2.7E-6 T 22-04-2016 APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 2.7E-6 T 22-04-2016 APECO1_RS20375 3c99c897a67a85a5760a74472b7ca318 219 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 APECO1_RS10895 3f33988d532c51b61201d5ec7a399457 350 Gene3D G3DSA:3.40.50.2000 205 325 1.1E-16 T 22-04-2016 APECO1_RS10895 3f33988d532c51b61201d5ec7a399457 350 PANTHER PTHR30160:SF7 6 318 3.2E-59 T 22-04-2016 APECO1_RS10895 3f33988d532c51b61201d5ec7a399457 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 232 320 5.5E-7 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APECO1_RS10895 3f33988d532c51b61201d5ec7a399457 350 PANTHER PTHR30160 6 318 3.2E-59 T 22-04-2016 APECO1_RS10895 3f33988d532c51b61201d5ec7a399457 350 SUPERFAMILY SSF53756 30 349 8.48E-34 T 22-04-2016 APECO1_RS20090 fde4df801c9080e508a33099a04bfa66 164 PIRSF PIRSF030840 1 162 2.3E-84 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like APECO1_RS20090 fde4df801c9080e508a33099a04bfa66 164 Pfam PF06228 Haem utilisation ChuX/HutX 22 156 2.7E-30 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like APECO1_RS20090 fde4df801c9080e508a33099a04bfa66 164 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 6 156 4.7E-63 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like APECO1_RS20090 fde4df801c9080e508a33099a04bfa66 164 Gene3D G3DSA:3.40.1570.10 5 161 1.7E-67 T 22-04-2016 APECO1_RS20090 fde4df801c9080e508a33099a04bfa66 164 SUPERFAMILY SSF144064 6 159 7.32E-46 T 22-04-2016 APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 SUPERFAMILY SSF56784 4 203 2.97E-47 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 Gene3D G3DSA:3.40.50.1000 63 213 1.1E-50 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 PANTHER PTHR18901 1 215 4.0E-153 T 22-04-2016 APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 Gene3D G3DSA:1.10.150.240 19 62 8.2E-6 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.6E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 3.6E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 3.6E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 3.6E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 1.0E-26 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 6 163 9.1E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 PANTHER PTHR18901:SF20 1 215 4.0E-153 T 22-04-2016 APECO1_RS12745 595d921c88a4a33c96ac80ed3d405d7d 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 37 181 4.2E-19 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS02280 fdecdfd75b85ce8d6ee69eb4c9784e20 590 Pfam PF00005 ABC transporter 352 500 9.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS02280 fdecdfd75b85ce8d6ee69eb4c9784e20 590 Pfam PF00664 ABC transporter transmembrane region 22 291 1.1E-35 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS02280 fdecdfd75b85ce8d6ee69eb4c9784e20 590 Gene3D G3DSA:1.20.1560.10 7 319 1.1E-69 T 22-04-2016 APECO1_RS02280 fdecdfd75b85ce8d6ee69eb4c9784e20 590 SMART SM00382 361 547 8.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS02280 fdecdfd75b85ce8d6ee69eb4c9784e20 590 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS02280 fdecdfd75b85ce8d6ee69eb4c9784e20 590 SUPERFAMILY SSF52540 330 572 1.41E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02280 fdecdfd75b85ce8d6ee69eb4c9784e20 590 SUPERFAMILY SSF90123 7 323 8.37E-71 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS02280 fdecdfd75b85ce8d6ee69eb4c9784e20 590 PANTHER PTHR24221 2 586 9.4E-199 T 22-04-2016 APECO1_RS02280 fdecdfd75b85ce8d6ee69eb4c9784e20 590 Gene3D G3DSA:3.40.50.300 340 565 3.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12815 5d5678182ef2a5d2964a53f0bb22c17e 257 Pfam PF00005 ABC transporter 21 181 1.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS12815 5d5678182ef2a5d2964a53f0bb22c17e 257 PANTHER PTHR24220 7 257 1.4E-189 T 22-04-2016 APECO1_RS12815 5d5678182ef2a5d2964a53f0bb22c17e 257 Gene3D G3DSA:3.40.50.300 6 252 1.6E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12815 5d5678182ef2a5d2964a53f0bb22c17e 257 PIRSF PIRSF039085 2 257 2.0E-122 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APECO1_RS12815 5d5678182ef2a5d2964a53f0bb22c17e 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS12815 5d5678182ef2a5d2964a53f0bb22c17e 257 SMART SM00382 30 229 7.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS12815 5d5678182ef2a5d2964a53f0bb22c17e 257 PANTHER PTHR24220:SF347 7 257 1.4E-189 T 22-04-2016 APECO1_RS12815 5d5678182ef2a5d2964a53f0bb22c17e 257 SUPERFAMILY SSF52540 6 251 3.24E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14310 0de1879287dcf91ba97e2c0ae860f5e1 258 Pfam PF07179 SseB protein N-terminal domain 8 119 1.4E-25 T 22-04-2016 IPR009839 SseB protein N-terminal domain APECO1_RS14310 0de1879287dcf91ba97e2c0ae860f5e1 258 Pfam PF14581 SseB protein C-terminal domain 137 243 1.7E-31 T 22-04-2016 IPR027945 SseB protein, C-terminal APECO1_RS14250 8fec2a074035782ead9102f498f08ddc 71 Pfam PF07191 zinc-ribbons 4 68 4.7E-30 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 APECO1_RS14250 8fec2a074035782ead9102f498f08ddc 71 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 71 3.0E-36 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 APECO1_RS14250 8fec2a074035782ead9102f498f08ddc 71 Gene3D G3DSA:2.10.290.10 1 69 2.4E-33 T 22-04-2016 IPR029037 YfgJ-like APECO1_RS14250 8fec2a074035782ead9102f498f08ddc 71 SUPERFAMILY SSF161187 1 69 3.79E-29 T 22-04-2016 IPR029037 YfgJ-like APECO1_RS20635 85f1a7af3b63c6f05c564b62d72ae451 396 PANTHER PTHR10578 7 377 4.7E-165 T 22-04-2016 APECO1_RS20635 85f1a7af3b63c6f05c564b62d72ae451 396 PANTHER PTHR10578:SF65 7 377 4.7E-165 T 22-04-2016 APECO1_RS20635 85f1a7af3b63c6f05c564b62d72ae451 396 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 22-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 APECO1_RS20635 85f1a7af3b63c6f05c564b62d72ae451 396 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.226 T 22-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 APECO1_RS20635 85f1a7af3b63c6f05c564b62d72ae451 396 Gene3D G3DSA:3.20.20.70 6 376 3.0E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS20635 85f1a7af3b63c6f05c564b62d72ae451 396 Pfam PF01070 FMN-dependent dehydrogenase 13 375 6.8E-124 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 APECO1_RS20635 85f1a7af3b63c6f05c564b62d72ae451 396 PIRSF PIRSF000138 2 379 6.0E-120 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 APECO1_RS20635 85f1a7af3b63c6f05c564b62d72ae451 396 SUPERFAMILY SSF51395 6 376 3.66E-99 T 22-04-2016 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.833 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 SUPERFAMILY SSF55681 8 292 2.61E-134 T 22-04-2016 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 Gene3D G3DSA:3.30.930.10 4 213 9.5E-107 T 22-04-2016 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 301 2.3E-178 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 PANTHER PTHR30075 1 302 2.2E-281 T 22-04-2016 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 5.5E-150 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20410 2455e392b06fb0d63a60f5dde5dbac53 303 Gene3D G3DSA:1.20.58.180 215 298 5.4E-37 T 22-04-2016 APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 Pfam PF04055 Radical SAM superfamily 146 323 3.1E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 SMART SM00729 140 365 5.5E-56 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 96 2.2E-21 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 SUPERFAMILY SSF102114 107 371 5.89E-54 T 22-04-2016 APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 Gene3D G3DSA:2.40.50.140 380 441 1.3E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 PANTHER PTHR11918:SF57 1 441 1.3E-251 T 22-04-2016 APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 Gene3D G3DSA:3.80.30.20 138 377 2.8E-76 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 64.107 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 1.7E-110 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 PANTHER PTHR11918 1 441 1.3E-251 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APECO1_RS04055 e3026565cedf656eb1b5c27a5c72c4fd 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 9.2E-203 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APECO1_RS13140 7b16742a1c7e103de7b18ba480cd0520 80 ProDom PD865026 ORF80 HKBM GENE GP15-GP3 ORF46 ORF-118 1 80 2.0E-40 T 22-04-2016 IPR022544 Bacteriophage P22, Orf80 APECO1_RS13140 7b16742a1c7e103de7b18ba480cd0520 80 Pfam PF10834 Protein of unknown function (DUF2560) 5 76 8.3E-44 T 22-04-2016 IPR022544 Bacteriophage P22, Orf80 APECO1_RS09455 4251deb9aa763b913725cbacba3d2c63 183 SUPERFAMILY SSF55469 1 168 1.44E-40 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APECO1_RS09455 4251deb9aa763b913725cbacba3d2c63 183 PANTHER PTHR23026:SF107 1 167 9.9E-95 T 22-04-2016 APECO1_RS09455 4251deb9aa763b913725cbacba3d2c63 183 PIRSF PIRSF000232 1 182 1.0E-70 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- APECO1_RS09455 4251deb9aa763b913725cbacba3d2c63 183 Pfam PF00881 Nitroreductase family 9 161 5.7E-27 T 22-04-2016 IPR029479 Nitroreductase APECO1_RS09455 4251deb9aa763b913725cbacba3d2c63 183 Gene3D G3DSA:3.40.109.10 1 168 3.0E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APECO1_RS09455 4251deb9aa763b913725cbacba3d2c63 183 PANTHER PTHR23026 1 167 9.9E-95 T 22-04-2016 APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 Pfam PF03958 Bacterial type II/III secretion system short domain 145 206 1.7E-10 T 22-04-2016 IPR005644 NolW-like APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 Pfam PF03958 Bacterial type II/III secretion system short domain 211 277 3.1E-16 T 22-04-2016 IPR005644 NolW-like APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 Pfam PF03958 Bacterial type II/III secretion system short domain 285 362 6.5E-16 T 22-04-2016 IPR005644 NolW-like APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 Pfam PF00263 Bacterial type II and III secretion system protein 465 626 4.5E-51 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PRINTS PR01032 Gene IV protein signature 446 469 3.3E-16 T 22-04-2016 APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PRINTS PR01032 Gene IV protein signature 553 581 3.3E-16 T 22-04-2016 APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PRINTS PR01032 Gene IV protein signature 486 509 3.3E-16 T 22-04-2016 APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PRINTS PR01032 Gene IV protein signature 606 628 3.3E-16 T 22-04-2016 APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PANTHER PTHR30332 37 653 5.7E-233 T 22-04-2016 APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 461 485 5.9E-37 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 362 372 5.9E-37 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 590 608 5.9E-37 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 496 506 5.9E-37 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PRINTS PR00811 Bacterial general secretion pathway protein D signature 613 627 5.9E-37 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 PANTHER PTHR30332:SF3 37 653 5.7E-233 T 22-04-2016 APECO1_RS17235 78bf14f74552c8647b6280b258568f38 686 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 47 634 6.3E-166 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 APECO1_RS16100 2a576af98296431e83baef673a657fbd 198 SUPERFAMILY SSF53697 10 195 1.44E-44 T 22-04-2016 APECO1_RS16100 2a576af98296431e83baef673a657fbd 198 PANTHER PTHR38418 44 196 4.0E-38 T 22-04-2016 APECO1_RS16100 2a576af98296431e83baef673a657fbd 198 Pfam PF01380 SIS domain 42 170 3.6E-26 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS16100 2a576af98296431e83baef673a657fbd 198 PANTHER PTHR38418:SF1 44 196 4.0E-38 T 22-04-2016 APECO1_RS16100 2a576af98296431e83baef673a657fbd 198 Gene3D G3DSA:3.40.50.10490 16 190 3.7E-41 T 22-04-2016 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 Gene3D G3DSA:3.20.80.10 123 289 1.0E-64 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 8.0E-22 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 PANTHER PTHR11019:SF84 6 112 1.3E-65 T 22-04-2016 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 SMART SM00342 21 104 3.6E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 Gene3D G3DSA:1.10.10.60 3 57 1.5E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 Gene3D G3DSA:1.10.10.60 58 119 1.8E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 SUPERFAMILY SSF55136 122 288 2.01E-57 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 PANTHER PTHR11019 6 112 1.3E-65 T 22-04-2016 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 SUPERFAMILY SSF46689 6 55 1.2E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 SMART SM00871 126 288 1.0E-13 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 SUPERFAMILY SSF46689 57 108 4.44E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS25635 321d927db6ca6ed72ffd13df944ad554 289 Pfam PF12833 Helix-turn-helix domain 27 105 1.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 PIRSF PIRSF001174 1 775 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 7.1E-57 T 22-04-2016 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 7.1E-57 T 22-04-2016 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 7.1E-57 T 22-04-2016 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 7.1E-57 T 22-04-2016 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 7.1E-57 T 22-04-2016 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 Gene3D G3DSA:3.30.230.10 590 771 3.1E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 Gene3D G3DSA:3.40.50.300 310 499 3.4E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 SUPERFAMILY SSF54211 595 771 1.1E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.567 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.1E-97 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 PANTHER PTHR10046:SF43 8 776 0.0 T 22-04-2016 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.1E-42 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 SMART SM00382 348 492 4.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 SUPERFAMILY SSF52540 313 587 5.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 SUPERFAMILY SSF88697 10 201 2.98E-52 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 SMART SM00464 10 202 6.5E-88 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 PANTHER PTHR10046 8 776 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.9E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS02235 3ecc64decd78cbb83e0b38983cbf8fcb 784 Gene3D G3DSA:1.10.8.60 500 584 4.4E-33 T 22-04-2016 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 PANTHER PTHR11938:SF93 23 472 0.0 T 22-04-2016 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 Gene3D G3DSA:3.40.50.720 150 236 5.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 Gene3D G3DSA:3.40.50.720 401 470 5.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 SUPERFAMILY SSF46548 7 157 1.1E-41 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 PANTHER PTHR11938 23 472 0.0 T 22-04-2016 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 4.8E-38 T 22-04-2016 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 4.8E-38 T 22-04-2016 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 4.8E-38 T 22-04-2016 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 4.8E-38 T 22-04-2016 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 4.8E-38 T 22-04-2016 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 5.8E-38 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 Gene3D G3DSA:3.50.50.60 237 400 5.6E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 6.2E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 4.9E-271 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 SUPERFAMILY SSF51971 145 401 1.12E-69 T 22-04-2016 APECO1_RS18515 fd5b03aa30b8e17b029fc42aeea0a135 472 Gene3D G3DSA:1.10.1060.10 5 149 8.8E-48 T 22-04-2016 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Gene3D G3DSA:3.30.750.60 141 212 9.2E-25 T 22-04-2016 IPR024429 Endosialidase, N-terminal extension domain APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Pfam PF12217 Catalytic beta propeller domain of bacteriophage endosialidase 213 662 3.5E-287 T 22-04-2016 IPR024428 Endosialidase, beta propeller domain APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Gene3D G3DSA:4.10.1090.10 664 817 1.3E-84 T 22-04-2016 IPR024430 Endosialidase, C-terminal domain APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Pfam PF09008 Head binding 1 113 5.4E-64 T 22-04-2016 IPR009093 Bacteriophage P22 tailspike, N-terminal GO:0009405 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Pfam PF13884 Chaperone of endosialidase 818 874 5.6E-8 T 22-04-2016 IPR030392 Intramolecular chaperone auto-processing domain APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Pfam PF12218 N terminal extension of bacteriophage endosialidase 146 212 6.0E-37 T 22-04-2016 IPR024429 Endosialidase, N-terminal extension domain APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Gene3D G3DSA:2.40.30.20 325 410 2.5E-37 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Gene3D G3DSA:2.120.10.10 213 323 1.6E-200 T 22-04-2016 IPR011040 Sialidases APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Gene3D G3DSA:2.120.10.10 411 663 1.6E-200 T 22-04-2016 IPR011040 Sialidases APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Gene3D G3DSA:2.170.14.10 6 109 2.1E-54 T 22-04-2016 IPR009093 Bacteriophage P22 tailspike, N-terminal GO:0009405 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 SUPERFAMILY SSF51327 7 109 1.83E-46 T 22-04-2016 IPR009093 Bacteriophage P22 tailspike, N-terminal GO:0009405 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 PRINTS PR00849 Glycosyl hydrolase family 58 signature 710 736 2.7E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 PRINTS PR00849 Glycosyl hydrolase family 58 signature 279 307 2.7E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 PRINTS PR00849 Glycosyl hydrolase family 58 signature 742 769 2.7E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 PRINTS PR00849 Glycosyl hydrolase family 58 signature 553 579 2.7E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 PRINTS PR00849 Glycosyl hydrolase family 58 signature 609 633 2.7E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 PRINTS PR00849 Glycosyl hydrolase family 58 signature 475 501 2.7E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 PRINTS PR00849 Glycosyl hydrolase family 58 signature 214 238 2.7E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 PRINTS PR00849 Glycosyl hydrolase family 58 signature 398 421 2.7E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 SUPERFAMILY SSF69349 668 817 8.63E-69 T 22-04-2016 APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 Pfam PF12219 Catalytic domain of bacteriophage endosialidase 663 817 8.2E-78 T 22-04-2016 IPR024430 Endosialidase, C-terminal domain APECO1_RS13035 c4ae9cfdeb625f3b3256c46b62347768 981 SUPERFAMILY SSF50939 145 667 0.0 T 22-04-2016 IPR011040 Sialidases APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 6.4E-27 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 Gene3D G3DSA:3.90.180.10 2 190 2.3E-69 T 22-04-2016 IPR011032 GroES-like APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 PANTHER PTHR11695 128 369 1.1E-215 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 PANTHER PTHR11695 15 108 1.1E-215 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 SUPERFAMILY SSF51735 161 333 6.83E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 PANTHER PTHR11695:SF560 128 369 1.1E-215 T 22-04-2016 APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 PANTHER PTHR11695:SF560 15 108 1.1E-215 T 22-04-2016 APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 SUPERFAMILY SSF50129 1 185 3.5E-71 T 22-04-2016 IPR011032 GroES-like APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.1E-224 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 SMART SM00829 12 367 5.4E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 SUPERFAMILY SSF50129 318 369 4.71E-12 T 22-04-2016 IPR011032 GroES-like APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 6.3E-21 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS01845 dbaa6f89b460872200e97dc7cdb3cd10 369 Gene3D G3DSA:3.40.50.720 191 309 1.3E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 PANTHER PTHR24220:SF86 314 323 2.8E-112 T 22-04-2016 APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 PANTHER PTHR24220:SF86 6 235 2.8E-112 T 22-04-2016 APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 Pfam PF12704 MacB-like periplasmic core domain 272 491 9.1E-41 T 22-04-2016 IPR025857 MacB-like periplasmic core domain APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 SMART SM00382 33 220 1.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 SUPERFAMILY SSF52540 4 228 2.28E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 Gene3D G3DSA:3.40.50.300 2 224 4.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 Pfam PF00005 ABC transporter 24 172 3.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 Pfam PF02687 FtsX-like permease family 527 641 2.3E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 PANTHER PTHR24220 314 323 2.8E-112 T 22-04-2016 APECO1_RS04285 470fd813c5e3faa7cf7bfe7b1dbf759a 648 PANTHER PTHR24220 6 235 2.8E-112 T 22-04-2016 APECO1_RS23995 b203f0189a8873eedbd18a9245fde95d 489 PANTHER PTHR11785 7 481 7.6E-153 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS23995 b203f0189a8873eedbd18a9245fde95d 489 PANTHER PTHR11785:SF77 7 481 7.6E-153 T 22-04-2016 APECO1_RS23995 b203f0189a8873eedbd18a9245fde95d 489 Pfam PF13520 Amino acid permease 14 426 5.0E-50 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS23995 b203f0189a8873eedbd18a9245fde95d 489 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 9 483 2.0E-146 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 APECO1_RS23995 b203f0189a8873eedbd18a9245fde95d 489 PIRSF PIRSF006060 1 461 4.8E-53 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS16215 02c62f307fe2cb6722c924c7482b7176 346 PANTHER PTHR11732 1 139 1.8E-216 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS16215 02c62f307fe2cb6722c924c7482b7176 346 PANTHER PTHR11732 157 346 1.8E-216 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS16215 02c62f307fe2cb6722c924c7482b7176 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.4E-72 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS16215 02c62f307fe2cb6722c924c7482b7176 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.9E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS16215 02c62f307fe2cb6722c924c7482b7176 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 2.9E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS16215 02c62f307fe2cb6722c924c7482b7176 346 PANTHER PTHR11732:SF112 1 139 1.8E-216 T 22-04-2016 APECO1_RS16215 02c62f307fe2cb6722c924c7482b7176 346 PANTHER PTHR11732:SF112 157 346 1.8E-216 T 22-04-2016 APECO1_RS16215 02c62f307fe2cb6722c924c7482b7176 346 Gene3D G3DSA:3.20.20.100 1 343 2.0E-105 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS16215 02c62f307fe2cb6722c924c7482b7176 346 SUPERFAMILY SSF51430 1 344 8.12E-106 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS15255 fe608134b246f55e317b9bff40c83132 330 Gene3D G3DSA:3.40.190.100 113 262 3.5E-58 T 22-04-2016 APECO1_RS15255 fe608134b246f55e317b9bff40c83132 330 Gene3D G3DSA:3.40.190.10 23 112 3.3E-58 T 22-04-2016 APECO1_RS15255 fe608134b246f55e317b9bff40c83132 330 Gene3D G3DSA:3.40.190.10 263 329 3.3E-58 T 22-04-2016 APECO1_RS15255 fe608134b246f55e317b9bff40c83132 330 SUPERFAMILY SSF53850 24 328 1.93E-97 T 22-04-2016 APECO1_RS15255 fe608134b246f55e317b9bff40c83132 330 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 312 6.7E-57 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 Pfam PF00571 CBS domain 265 306 8.4E-5 T 22-04-2016 IPR000644 CBS domain APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 SUPERFAMILY SSF54631 264 306 2.75E-6 T 22-04-2016 APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 PANTHER PTHR24220 3 296 4.3E-186 T 22-04-2016 APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 SMART SM00382 26 212 2.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 PANTHER PTHR24220:SF434 3 296 4.3E-186 T 22-04-2016 APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 Pfam PF00005 ABC transporter 18 162 6.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 Gene3D G3DSA:3.10.580.10 232 306 4.9E-5 T 22-04-2016 APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 Gene3D G3DSA:3.40.50.300 1 231 1.5E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11915 165d06ad1b2ead2c8bdb44fbf4d0bf10 308 SUPERFAMILY SSF52540 1 239 3.69E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03740 4efb495197c638234c35892befd7eca0 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 157 1.7E-38 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APECO1_RS03740 4efb495197c638234c35892befd7eca0 158 Gene3D G3DSA:3.90.280.10 1 158 5.3E-58 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APECO1_RS03740 4efb495197c638234c35892befd7eca0 158 PANTHER PTHR30289:SF3 1 157 9.0E-134 T 22-04-2016 APECO1_RS03740 4efb495197c638234c35892befd7eca0 158 SUPERFAMILY SSF49777 1 157 2.88E-52 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APECO1_RS03740 4efb495197c638234c35892befd7eca0 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 157 3.1E-58 T 22-04-2016 IPR005247 YbhB/YbcL APECO1_RS03740 4efb495197c638234c35892befd7eca0 158 PANTHER PTHR30289 1 157 9.0E-134 T 22-04-2016 APECO1_RS09170 14ee02223112b6f73995d3e2cfa73487 154 Pfam PF00877 NlpC/P60 family 47 153 4.3E-31 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS09170 14ee02223112b6f73995d3e2cfa73487 154 Gene3D G3DSA:3.90.1720.10 38 154 3.9E-40 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS09170 14ee02223112b6f73995d3e2cfa73487 154 PANTHER PTHR21666 6 154 7.2E-43 T 22-04-2016 APECO1_RS09170 14ee02223112b6f73995d3e2cfa73487 154 SUPERFAMILY SSF54001 34 154 2.42E-39 T 22-04-2016 APECO1_RS13255 bddb85a162b30dedc65406256a88e73c 216 SUPERFAMILY SSF51306 85 209 6.45E-29 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APECO1_RS13255 bddb85a162b30dedc65406256a88e73c 216 Gene3D G3DSA:1.10.260.40 6 68 8.4E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS13255 bddb85a162b30dedc65406256a88e73c 216 PANTHER PTHR33516:SF3 85 208 8.9E-51 T 22-04-2016 APECO1_RS13255 bddb85a162b30dedc65406256a88e73c 216 SMART SM00530 9 64 2.9E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS13255 bddb85a162b30dedc65406256a88e73c 216 Pfam PF01381 Helix-turn-helix 10 64 1.3E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS13255 bddb85a162b30dedc65406256a88e73c 216 PANTHER PTHR33516 85 208 8.9E-51 T 22-04-2016 APECO1_RS13255 bddb85a162b30dedc65406256a88e73c 216 SUPERFAMILY SSF47413 1 70 2.63E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS13255 bddb85a162b30dedc65406256a88e73c 216 Pfam PF00717 Peptidase S24-like 128 200 2.4E-18 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APECO1_RS13255 bddb85a162b30dedc65406256a88e73c 216 Gene3D G3DSA:2.10.109.10 120 210 3.9E-34 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APECO1_RS01650 735114747499e7d7b8be2ca30884dc2f 264 SUPERFAMILY SSF46894 117 190 1.7E-11 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS01650 735114747499e7d7b8be2ca30884dc2f 264 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 179 2.7E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS01650 735114747499e7d7b8be2ca30884dc2f 264 Gene3D G3DSA:1.10.10.10 127 181 1.3E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01650 735114747499e7d7b8be2ca30884dc2f 264 SMART SM00421 132 189 4.1E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10030 772a86beab13d5d12158e259812cd083 366 PANTHER PTHR30333 1 365 5.1E-242 T 22-04-2016 APECO1_RS10030 772a86beab13d5d12158e259812cd083 366 SUPERFAMILY SSF48695 18 179 1.17E-47 T 22-04-2016 IPR011031 Multihaem cytochrome APECO1_RS10030 772a86beab13d5d12158e259812cd083 366 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 6 174 2.0E-66 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal APECO1_RS10030 772a86beab13d5d12158e259812cd083 366 Gene3D G3DSA:1.10.3820.10 312 318 3.5E-27 T 22-04-2016 APECO1_RS10030 772a86beab13d5d12158e259812cd083 366 Gene3D G3DSA:1.10.3820.10 5 176 3.5E-27 T 22-04-2016 APECO1_RS10030 772a86beab13d5d12158e259812cd083 366 PANTHER PTHR30333:SF3 1 365 5.1E-242 T 22-04-2016 APECO1_RS10030 772a86beab13d5d12158e259812cd083 366 PIRSF PIRSF000014 1 366 5.5E-155 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 APECO1_RS20030 99f9f5d9a261d8ef338974ed9b740f61 280 SUPERFAMILY SSF53335 9 279 3.74E-100 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS20030 99f9f5d9a261d8ef338974ed9b740f61 280 PANTHER PTHR37426:SF1 2 280 4.2E-168 T 22-04-2016 APECO1_RS20030 99f9f5d9a261d8ef338974ed9b740f61 280 PANTHER PTHR37426 2 280 4.2E-168 T 22-04-2016 APECO1_RS20030 99f9f5d9a261d8ef338974ed9b740f61 280 Gene3D G3DSA:3.40.50.150 1 280 1.7E-120 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS20030 99f9f5d9a261d8ef338974ed9b740f61 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS20030 99f9f5d9a261d8ef338974ed9b740f61 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS20030 99f9f5d9a261d8ef338974ed9b740f61 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.922 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APECO1_RS20030 99f9f5d9a261d8ef338974ed9b740f61 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 4.3E-119 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 Gene3D G3DSA:2.40.128.90 24 316 9.9E-123 T 22-04-2016 IPR023619 Peptidase A26 GO:0004190 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 ProSitePatterns PS00834 Aspartyl proteases, omptin family signature 1. 115 124 - T 22-04-2016 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PIRSF PIRSF001522 1 316 3.5E-137 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 Pfam PF01278 Omptin family 28 316 7.6E-121 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PRINTS PR00482 Omptin serine protease signature 239 259 2.0E-114 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PRINTS PR00482 Omptin serine protease signature 143 170 2.0E-114 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PRINTS PR00482 Omptin serine protease signature 211 232 2.0E-114 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PRINTS PR00482 Omptin serine protease signature 82 107 2.0E-114 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PRINTS PR00482 Omptin serine protease signature 260 280 2.0E-114 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PRINTS PR00482 Omptin serine protease signature 115 142 2.0E-114 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PRINTS PR00482 Omptin serine protease signature 56 81 2.0E-114 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PRINTS PR00482 Omptin serine protease signature 189 210 2.0E-114 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 PRINTS PR00482 Omptin serine protease signature 36 50 2.0E-114 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 SUPERFAMILY SSF69917 23 316 4.45E-114 T 22-04-2016 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 APECO1_RS07760 3d3caed6c4d0e3762d7a4653fbbd90f7 316 ProSitePatterns PS00835 Aspartyl proteases, omptin family signature 2. 152 168 - T 22-04-2016 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 Pfam PF12833 Helix-turn-helix domain 180 256 1.7E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 Gene3D G3DSA:1.10.10.60 158 212 6.2E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 SUPERFAMILY SSF46689 213 258 1.97E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 SUPERFAMILY SSF51182 23 181 8.22E-13 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 SMART SM00342 173 256 3.7E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 Gene3D G3DSA:2.60.120.10 32 93 9.1E-9 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 Gene3D G3DSA:1.10.10.60 222 255 2.2E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 Pfam PF02311 AraC-like ligand binding domain 22 98 7.6E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 PANTHER PTHR11019:SF66 4 264 2.2E-163 T 22-04-2016 APECO1_RS09585 048778298db497ea725fc4ec41675aad 273 PANTHER PTHR11019 4 264 2.2E-163 T 22-04-2016 APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 SUPERFAMILY SSF51604 145 397 4.06E-55 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 67 157 3.1E-8 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 Hamap MF_01288 L-rhamnonate dehydratase [rhmD]. 1 401 79.558 T 22-04-2016 IPR023444 L-rhamnonate dehydratase GO:0050032 KEGG: 00051+4.2.1.90|MetaCyc: PWY-6713|MetaCyc: PWY-6714 APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 SMART SM00922 163 269 1.3E-7 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 Gene3D G3DSA:3.30.390.10 2 162 2.6E-43 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 PANTHER PTHR13794:SF59 25 401 0.0 T 22-04-2016 APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 PANTHER PTHR13794 25 401 0.0 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 132 157 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 Pfam PF13378 Enolase C-terminal domain-like 183 392 1.6E-36 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 Gene3D G3DSA:3.20.20.120 163 390 7.1E-57 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS12530 3e53af072acf9990bbdaaca47dce1cf2 401 SUPERFAMILY SSF54826 41 158 1.4E-23 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS20760 0c2270faf377c68dcab186c598afa185 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 1.8E-67 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 APECO1_RS20760 0c2270faf377c68dcab186c598afa185 425 SUPERFAMILY SSF53756 57 420 2.06E-19 T 22-04-2016 APECO1_RS20760 0c2270faf377c68dcab186c598afa185 425 PANTHER PTHR23417 1 111 2.9E-155 T 22-04-2016 APECO1_RS20760 0c2270faf377c68dcab186c598afa185 425 PANTHER PTHR23417 190 423 2.9E-155 T 22-04-2016 APECO1_RS20760 0c2270faf377c68dcab186c598afa185 425 PANTHER PTHR23417 130 140 2.9E-155 T 22-04-2016 APECO1_RS20760 0c2270faf377c68dcab186c598afa185 425 Pfam PF00534 Glycosyl transferases group 1 240 398 1.1E-11 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APECO1_RS20760 0c2270faf377c68dcab186c598afa185 425 PANTHER PTHR23417:SF2 1 111 2.9E-155 T 22-04-2016 APECO1_RS20760 0c2270faf377c68dcab186c598afa185 425 PANTHER PTHR23417:SF2 190 423 2.9E-155 T 22-04-2016 APECO1_RS20760 0c2270faf377c68dcab186c598afa185 425 PANTHER PTHR23417:SF2 130 140 2.9E-155 T 22-04-2016 APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 283 5.5E-24 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 PANTHER PTHR11908 6 288 2.9E-145 T 22-04-2016 APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 SMART SM01092 181 283 5.2E-25 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 Gene3D G3DSA:3.30.390.50 180 288 7.4E-29 T 22-04-2016 APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 SUPERFAMILY SSF55447 181 284 6.8E-25 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 PANTHER PTHR11908:SF70 6 288 2.9E-145 T 22-04-2016 APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 Gene3D G3DSA:3.30.43.10 6 56 1.6E-14 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 173 1.4E-51 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 SUPERFAMILY SSF56176 6 173 1.96E-51 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS16290 afdfdd0e034bc51e760a17f11f637e19 292 Gene3D G3DSA:3.30.465.10 57 173 2.6E-36 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS17550 88d77487609a0384c4f8b4fc5089a0d1 245 PANTHER PTHR10434:SF20 1 245 1.1E-179 T 22-04-2016 APECO1_RS17550 88d77487609a0384c4f8b4fc5089a0d1 245 SUPERFAMILY SSF69593 2 240 4.45E-62 T 22-04-2016 APECO1_RS17550 88d77487609a0384c4f8b4fc5089a0d1 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 7.7E-52 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 APECO1_RS17550 88d77487609a0384c4f8b4fc5089a0d1 245 PANTHER PTHR10434 1 245 1.1E-179 T 22-04-2016 APECO1_RS17550 88d77487609a0384c4f8b4fc5089a0d1 245 SMART SM00563 67 182 2.0E-39 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APECO1_RS17550 88d77487609a0384c4f8b4fc5089a0d1 245 Pfam PF01553 Acyltransferase 54 180 3.5E-32 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APECO1_RS17550 88d77487609a0384c4f8b4fc5089a0d1 245 Gene3D G3DSA:3.40.1130.10 64 233 3.7E-16 T 22-04-2016 APECO1_RS00705 8c2ce3a5d3d99a5b1d666928890d7940 146 Pfam PF03610 PTS system fructose IIA component 3 116 5.8E-30 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS00705 8c2ce3a5d3d99a5b1d666928890d7940 146 Gene3D G3DSA:3.40.50.510 1 133 5.4E-31 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS00705 8c2ce3a5d3d99a5b1d666928890d7940 146 SUPERFAMILY SSF53062 1 124 5.49E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS00705 8c2ce3a5d3d99a5b1d666928890d7940 146 PANTHER PTHR33799 2 146 1.0E-67 T 22-04-2016 APECO1_RS00705 8c2ce3a5d3d99a5b1d666928890d7940 146 PANTHER PTHR33799:SF1 2 146 1.0E-67 T 22-04-2016 APECO1_RS13000 1de40c116bd26f06f23127c4d2cb796e 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 3.9E-47 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APECO1_RS13000 1de40c116bd26f06f23127c4d2cb796e 94 PANTHER PTHR38769 1 94 1.1E-32 T 22-04-2016 APECO1_RS13000 1de40c116bd26f06f23127c4d2cb796e 94 PANTHER PTHR38769:SF1 1 94 1.1E-32 T 22-04-2016 APECO1_RS13000 1de40c116bd26f06f23127c4d2cb796e 94 Gene3D G3DSA:3.30.70.860 23 94 3.4E-35 T 22-04-2016 APECO1_RS13000 1de40c116bd26f06f23127c4d2cb796e 94 Pfam PF04175 Protein of unknown function (DUF406) 3 94 6.7E-39 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APECO1_RS25310 3b3d118a8164d9b50bba9dc2348ec238 317 Pfam PF06147 Protein of unknown function (DUF968) 117 314 1.4E-88 T 22-04-2016 IPR010373 Protein of unknown function DUF968 APECO1_RS25310 3b3d118a8164d9b50bba9dc2348ec238 317 SMART SM00507 234 283 1.9E-5 T 22-04-2016 IPR003615 HNH nuclease APECO1_RS15700 c317c829e12f496268bed2f3f3bfd3db 191 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 12 184 8.8E-63 T 22-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 APECO1_RS15700 c317c829e12f496268bed2f3f3bfd3db 191 PIRSF PIRSF016897 1 190 1.0E-68 T 22-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 APECO1_RS15700 c317c829e12f496268bed2f3f3bfd3db 191 SUPERFAMILY SSF110391 11 185 2.75E-56 T 22-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 APECO1_RS15700 c317c829e12f496268bed2f3f3bfd3db 191 PANTHER PTHR35787 2 190 8.2E-73 T 22-04-2016 APECO1_RS15700 c317c829e12f496268bed2f3f3bfd3db 191 Gene3D G3DSA:3.20.20.400 3 186 1.0E-68 T 22-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 APECO1_RS07700 4462edb34ae98080f8e6eaa1e2bcea93 247 SMART SM00232 1 119 0.0032 T 22-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 APECO1_RS07700 4462edb34ae98080f8e6eaa1e2bcea93 247 SUPERFAMILY SSF102712 6 97 2.75E-16 T 22-04-2016 APECO1_RS07700 4462edb34ae98080f8e6eaa1e2bcea93 247 PANTHER PTHR34858:SF1 3 230 3.5E-68 T 22-04-2016 APECO1_RS07700 4462edb34ae98080f8e6eaa1e2bcea93 247 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 98 2.1E-13 T 22-04-2016 IPR028090 JAB domain, prokaryotic APECO1_RS07700 4462edb34ae98080f8e6eaa1e2bcea93 247 Pfam PF00877 NlpC/P60 family 111 223 9.6E-14 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS07700 4462edb34ae98080f8e6eaa1e2bcea93 247 PANTHER PTHR34858 3 230 3.5E-68 T 22-04-2016 APECO1_RS07700 4462edb34ae98080f8e6eaa1e2bcea93 247 Gene3D G3DSA:3.40.140.10 5 114 1.2E-17 T 22-04-2016 APECO1_RS07700 4462edb34ae98080f8e6eaa1e2bcea93 247 SUPERFAMILY SSF54001 101 228 4.12E-17 T 22-04-2016 APECO1_RS07700 4462edb34ae98080f8e6eaa1e2bcea93 247 Gene3D G3DSA:3.90.1720.10 115 227 4.2E-17 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 Gene3D G3DSA:3.40.1390.20 226 366 2.8E-30 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 392 707 3.4E-129 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 SUPERFAMILY SSF52540 4 241 1.59E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 Gene3D G3DSA:3.40.50.10750 525 683 1.0E-67 T 22-04-2016 APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 PANTHER PTHR23406 179 714 7.6E-58 T 22-04-2016 APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 Pfam PF13500 AAA domain 5 230 1.9E-47 T 22-04-2016 APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 Gene3D G3DSA:3.40.50.300 3 224 2.5E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 Pfam PF07085 DRTGG domain 234 345 1.8E-29 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 407 707 5.1E-139 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 SUPERFAMILY SSF53659 393 711 1.44E-94 T 22-04-2016 APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 SUPERFAMILY SSF75138 230 354 2.75E-25 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 PIRSF PIRSF006107 1 714 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APECO1_RS12770 c2b0ce4eb3a42e05471340542ba944d9 714 PANTHER PTHR23406:SF3 179 714 7.6E-58 T 22-04-2016 APECO1_RS19190 8e96038d70f7e04647cfa404b02419d5 95 PANTHER PTHR37526 1 95 7.3E-36 T 22-04-2016 APECO1_RS19190 8e96038d70f7e04647cfa404b02419d5 95 Pfam PF04077 DsrH like protein 7 91 9.7E-30 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 APECO1_RS19190 8e96038d70f7e04647cfa404b02419d5 95 SUPERFAMILY SSF75169 1 95 3.83E-32 T 22-04-2016 IPR027396 DsrEFH-like APECO1_RS19190 8e96038d70f7e04647cfa404b02419d5 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 1.3E-33 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 APECO1_RS19190 8e96038d70f7e04647cfa404b02419d5 95 Gene3D G3DSA:3.40.1260.10 1 94 9.8E-35 T 22-04-2016 IPR027396 DsrEFH-like APECO1_RS19190 8e96038d70f7e04647cfa404b02419d5 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 30.492 T 22-04-2016 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 PANTHER PTHR33121:SF1 113 354 2.3E-77 T 22-04-2016 APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 SMART SM00052 105 351 6.9E-113 T 22-04-2016 IPR001633 EAL domain APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 SUPERFAMILY SSF46894 17 74 8.5E-10 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 Pfam PF00196 Bacterial regulatory proteins, luxR family 26 73 1.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 Gene3D G3DSA:3.20.20.450 112 353 3.3E-72 T 22-04-2016 IPR001633 EAL domain APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 SMART SM00421 22 79 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 Pfam PF00563 EAL domain 112 346 1.2E-60 T 22-04-2016 IPR001633 EAL domain APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 SUPERFAMILY SSF141868 112 354 1.96E-71 T 22-04-2016 IPR001633 EAL domain APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 Gene3D G3DSA:1.10.10.10 26 73 4.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01690 708ef893d10de5ff794037cacca7fb87 362 PANTHER PTHR33121 113 354 2.3E-77 T 22-04-2016 APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 SUPERFAMILY SSF56784 1 271 1.5E-63 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 PANTHER PTHR10000 1 272 6.4E-86 T 22-04-2016 APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 Gene3D G3DSA:3.40.50.1000 176 271 3.8E-50 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 Gene3D G3DSA:3.40.50.1000 1 73 3.8E-50 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 2.7E-21 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 5.7E-73 T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 22-04-2016 APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 2.1E-64 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS03705 52173d1df1f11001b823614af4f01bcb 272 PANTHER PTHR10000:SF8 1 272 6.4E-86 T 22-04-2016 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 Gene3D G3DSA:3.30.300.30 466 563 6.5E-30 T 22-04-2016 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 SUPERFAMILY SSF56801 23 566 7.33E-155 T 22-04-2016 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 PANTHER PTHR24096 187 564 9.5E-187 T 22-04-2016 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 PANTHER PTHR24096 25 164 9.5E-187 T 22-04-2016 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 Gene3D G3DSA:3.40.50.980 196 227 4.3E-43 T 22-04-2016 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 Gene3D G3DSA:3.40.50.980 34 163 4.3E-43 T 22-04-2016 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 Pfam PF00501 AMP-binding enzyme 40 471 3.1E-114 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 222 233 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 Gene3D G3DSA:3.40.50.980 228 390 9.0E-41 T 22-04-2016 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 Gene3D G3DSA:2.30.38.10 391 462 5.0E-31 T 22-04-2016 APECO1_RS09650 1397a1fc76f5c13b43e0ff7781abc222 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 554 2.8E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APECO1_RS11485 8374b7c4b145b566ffcf8d38afb9e249 646 Gene3D G3DSA:1.10.150.20 516 552 8.9E-6 T 22-04-2016 APECO1_RS11485 8374b7c4b145b566ffcf8d38afb9e249 646 Gene3D G3DSA:1.10.510.10 112 223 6.0E-7 T 22-04-2016 APECO1_RS11485 8374b7c4b145b566ffcf8d38afb9e249 646 SUPERFAMILY SSF56112 83 227 1.07E-11 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS11485 8374b7c4b145b566ffcf8d38afb9e249 646 PIRSF PIRSF030823 1 646 0.0 T 22-04-2016 IPR016960 Uncharacterised conserved protein UCP030823, kinase, HhH DNA-binding APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 SUPERFAMILY SSF52518 121 546 8.1E-89 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 Gene3D G3DSA:3.40.50.970 162 550 6.3E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 SMART SM00861 591 784 1.6E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.0E-15 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 PANTHER PTHR23152 1 933 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 788 930 3.0E-54 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 SUPERFAMILY SSF52518 575 791 4.04E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 Pfam PF00676 Dehydrogenase E1 component 218 511 1.1E-48 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 PIRSF PIRSF000157 1 932 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 PANTHER PTHR23152:SF4 1 933 0.0 T 22-04-2016 APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 Pfam PF02779 Transketolase, pyrimidine binding domain 591 785 4.6E-67 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 930 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APECO1_RS03495 5cf06ce62b9e2618a775454fd37dbb54 933 Gene3D G3DSA:3.40.50.970 592 787 3.1E-26 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS07360 e280c5718cd52f58b3d7f1c492b16510 537 Gene3D G3DSA:3.10.105.10 291 505 1.1E-64 T 22-04-2016 APECO1_RS07360 e280c5718cd52f58b3d7f1c492b16510 537 PIRSF PIRSF002741 2 537 1.0E-112 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APECO1_RS07360 e280c5718cd52f58b3d7f1c492b16510 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 453 1.1E-87 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS07360 e280c5718cd52f58b3d7f1c492b16510 537 PANTHER PTHR30290 5 537 0.0 T 22-04-2016 APECO1_RS07360 e280c5718cd52f58b3d7f1c492b16510 537 PANTHER PTHR30290:SF23 5 537 0.0 T 22-04-2016 APECO1_RS07360 e280c5718cd52f58b3d7f1c492b16510 537 SUPERFAMILY SSF53850 32 528 2.61E-140 T 22-04-2016 APECO1_RS07360 e280c5718cd52f58b3d7f1c492b16510 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 104 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site APECO1_RS07360 e280c5718cd52f58b3d7f1c492b16510 537 Gene3D G3DSA:3.90.76.10 44 216 2.0E-48 T 22-04-2016 APECO1_RS04345 ad0d16ef036357f8ef18780fa0e726de 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 9.5E-71 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APECO1_RS04345 ad0d16ef036357f8ef18780fa0e726de 234 PANTHER PTHR30098:SF2 1 233 8.7E-95 T 22-04-2016 APECO1_RS04345 ad0d16ef036357f8ef18780fa0e726de 234 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 231 1.5E-95 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APECO1_RS04345 ad0d16ef036357f8ef18780fa0e726de 234 SUPERFAMILY SSF55729 2 228 4.24E-94 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS04345 ad0d16ef036357f8ef18780fa0e726de 234 PANTHER PTHR30098 1 233 8.7E-95 T 22-04-2016 APECO1_RS04345 ad0d16ef036357f8ef18780fa0e726de 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 97.461 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 SUPERFAMILY SSF140990 402 602 3.79E-73 T 22-04-2016 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 3.7E-248 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 Pfam PF06480 FtsH Extracellular 5 93 1.5E-16 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 PANTHER PTHR23076 1 629 0.0 T 22-04-2016 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 SUPERFAMILY SSF52540 141 391 7.38E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.2E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 612 37.49 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 Pfam PF01434 Peptidase family M41 382 591 8.2E-83 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 Gene3D G3DSA:3.40.50.300 144 331 2.9E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 Gene3D G3DSA:1.10.8.60 332 406 5.6E-29 T 22-04-2016 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APECO1_RS18340 be9a89b705d157b2d7358a7f019fb0f8 644 SMART SM00382 184 323 1.9E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS14955 ee76ab80ea1f798304478e867c587f9d 107 Pfam PF05135 Phage gp6-like head-tail connector protein 4 103 4.2E-19 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein APECO1_RS19845 37921dab3e2edc0b45927b528e3c125e 222 SUPERFAMILY SSF52540 1 216 1.86E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19845 37921dab3e2edc0b45927b528e3c125e 222 PANTHER PTHR24220 3 216 2.5E-128 T 22-04-2016 APECO1_RS19845 37921dab3e2edc0b45927b528e3c125e 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS19845 37921dab3e2edc0b45927b528e3c125e 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 6.3E-94 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 APECO1_RS19845 37921dab3e2edc0b45927b528e3c125e 222 SMART SM00382 27 214 2.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19845 37921dab3e2edc0b45927b528e3c125e 222 Gene3D G3DSA:3.40.50.300 1 215 8.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19845 37921dab3e2edc0b45927b528e3c125e 222 Pfam PF00005 ABC transporter 18 165 1.6E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19845 37921dab3e2edc0b45927b528e3c125e 222 PANTHER PTHR24220:SF470 3 216 2.5E-128 T 22-04-2016 APECO1_RS07440 e4472bd92f93db2dd6114c9a9ca65902 311 PANTHER PTHR11807 9 288 2.1E-123 T 22-04-2016 APECO1_RS07440 e4472bd92f93db2dd6114c9a9ca65902 311 PANTHER PTHR11807:SF16 9 288 2.1E-123 T 22-04-2016 APECO1_RS07440 e4472bd92f93db2dd6114c9a9ca65902 311 SUPERFAMILY SSF52402 17 235 2.72E-53 T 22-04-2016 APECO1_RS07440 e4472bd92f93db2dd6114c9a9ca65902 311 PIRSF PIRSF004976 2 273 3.1E-77 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 APECO1_RS07440 e4472bd92f93db2dd6114c9a9ca65902 311 Gene3D G3DSA:3.40.50.620 23 206 1.1E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS07440 e4472bd92f93db2dd6114c9a9ca65902 311 Pfam PF01171 PP-loop family 42 204 3.2E-13 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APECO1_RS07440 e4472bd92f93db2dd6114c9a9ca65902 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.85 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.2E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 34.312 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 Gene3D G3DSA:3.10.50.30 80 157 5.0E-33 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 Gene3D G3DSA:1.10.287.180 1 75 8.8E-36 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 PIRSF PIRSF006092 1 158 5.6E-56 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 SUPERFAMILY SSF46557 3 78 2.35E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 7.7E-61 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 SUPERFAMILY SSF54534 81 157 4.05E-25 T 22-04-2016 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 PANTHER PTHR30437 1 157 1.2E-77 T 22-04-2016 APECO1_RS18355 f95204fe2fc7c5121ae469e673ef6f03 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.9E-32 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 4.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 4.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 4.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 4.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 4.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 Pfam PF00248 Aldo/keto reductase family 9 250 5.0E-49 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 PIRSF PIRSF000097 1 265 5.9E-67 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 PANTHER PTHR11732 1 267 4.2E-178 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 SUPERFAMILY SSF51430 2 257 3.8E-81 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 Gene3D G3DSA:3.20.20.100 1 259 5.1E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS01090 f1f0c3adca141614555cc303d34762b4 267 PANTHER PTHR11732:SF100 1 267 4.2E-178 T 22-04-2016 APECO1_RS01175 0002fd732c1b627978520b63ba99d428 251 Pfam PF09850 Type VI secretion system protein DotU 31 231 2.5E-54 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU APECO1_RS01175 0002fd732c1b627978520b63ba99d428 251 PANTHER PTHR38033:SF1 1 251 3.1E-72 T 22-04-2016 APECO1_RS01175 0002fd732c1b627978520b63ba99d428 251 PANTHER PTHR38033 1 251 3.1E-72 T 22-04-2016 APECO1_RS01175 0002fd732c1b627978520b63ba99d428 251 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 30 240 5.9E-65 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 Pfam PF13604 AAA domain 155 318 1.8E-32 T 22-04-2016 APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 SMART SM00382 163 320 0.0093 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 Pfam PF13538 UvrD-like helicase C-terminal domain 534 579 1.0E-14 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 PANTHER PTHR10887 152 319 8.2E-94 T 22-04-2016 APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 Gene3D G3DSA:3.40.50.300 153 296 1.8E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 Gene3D G3DSA:3.40.50.300 418 464 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 Gene3D G3DSA:3.40.50.300 297 310 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 Gene3D G3DSA:3.40.50.300 521 592 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 Gene3D G3DSA:3.40.50.300 354 380 3.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 PANTHER PTHR10887:SF351 152 319 8.2E-94 T 22-04-2016 APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 SUPERFAMILY SSF52540 281 378 7.97E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 SUPERFAMILY SSF52540 434 602 7.97E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 602 1.6E-197 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 15 604 57.096 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 APECO1_RS16130 1f611c136f420465acf9d00c3cdb79e9 608 SUPERFAMILY SSF52540 6 360 1.28E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22155 986dcf3e4da9e0e9cf0024dd3b0dd689 449 Gene3D G3DSA:1.20.1250.20 18 227 7.3E-23 T 22-04-2016 APECO1_RS22155 986dcf3e4da9e0e9cf0024dd3b0dd689 449 Gene3D G3DSA:1.20.1250.20 245 437 3.6E-18 T 22-04-2016 APECO1_RS22155 986dcf3e4da9e0e9cf0024dd3b0dd689 449 Pfam PF07690 Major Facilitator Superfamily 54 392 7.5E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS22155 986dcf3e4da9e0e9cf0024dd3b0dd689 449 PANTHER PTHR23508:SF1 1 449 5.8E-157 T 22-04-2016 APECO1_RS22155 986dcf3e4da9e0e9cf0024dd3b0dd689 449 PANTHER PTHR23508 1 449 5.8E-157 T 22-04-2016 APECO1_RS22155 986dcf3e4da9e0e9cf0024dd3b0dd689 449 SUPERFAMILY SSF103473 15 435 8.63E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS11880 73d6084f437c6796efb795249317dc71 153 PANTHER PTHR40578 1 153 2.5E-54 T 22-04-2016 APECO1_RS11880 73d6084f437c6796efb795249317dc71 153 Gene3D G3DSA:3.30.1830.10 27 153 1.4E-45 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 APECO1_RS11880 73d6084f437c6796efb795249317dc71 153 PIRSF PIRSF006187 1 153 6.5E-59 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 APECO1_RS11880 73d6084f437c6796efb795249317dc71 153 SUPERFAMILY SSF160704 24 153 6.28E-40 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 APECO1_RS11880 73d6084f437c6796efb795249317dc71 153 PANTHER PTHR40578:SF1 1 153 2.5E-54 T 22-04-2016 APECO1_RS11880 73d6084f437c6796efb795249317dc71 153 Pfam PF06998 Protein of unknown function (DUF1307) 28 150 1.5E-41 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 APECO1_RS16535 04c97773f19056f8a72c5728a9cc4c6f 292 Pfam PF01642 Methylmalonyl-CoA mutase 28 289 3.7E-109 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 APECO1_RS16535 04c97773f19056f8a72c5728a9cc4c6f 292 SUPERFAMILY SSF51703 4 291 3.3E-105 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 APECO1_RS16535 04c97773f19056f8a72c5728a9cc4c6f 292 PANTHER PTHR23408 5 288 7.5E-168 T 22-04-2016 APECO1_RS16535 04c97773f19056f8a72c5728a9cc4c6f 292 PANTHER PTHR23408:SF1 5 288 7.5E-168 T 22-04-2016 APECO1_RS16535 04c97773f19056f8a72c5728a9cc4c6f 292 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 28 291 2.3E-137 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 APECO1_RS16535 04c97773f19056f8a72c5728a9cc4c6f 292 Gene3D G3DSA:3.20.20.240 28 291 1.4E-120 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 APECO1_RS12405 264e24997204dbd0b3839e380534dcae 216 SUPERFAMILY SSF100950 2 211 1.06E-67 T 22-04-2016 APECO1_RS12405 264e24997204dbd0b3839e380534dcae 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 22-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 APECO1_RS12405 264e24997204dbd0b3839e380534dcae 216 Pfam PF01144 Coenzyme A transferase 5 179 2.1E-37 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS12405 264e24997204dbd0b3839e380534dcae 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 204 1.7E-92 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 APECO1_RS12405 264e24997204dbd0b3839e380534dcae 216 PANTHER PTHR13707 1 215 8.9E-120 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS12405 264e24997204dbd0b3839e380534dcae 216 SMART SM00882 5 198 3.6E-65 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS12405 264e24997204dbd0b3839e380534dcae 216 Gene3D G3DSA:3.40.810.20 3 209 8.9E-84 T 22-04-2016 APECO1_RS09245 9dbc91605b8fb4b58765db853b16df49 309 PIRSF PIRSF000535 1 309 4.2E-112 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APECO1_RS09245 9dbc91605b8fb4b58765db853b16df49 309 Gene3D G3DSA:3.40.1190.20 35 305 1.5E-75 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS09245 9dbc91605b8fb4b58765db853b16df49 309 Pfam PF00294 pfkB family carbohydrate kinase 12 296 3.4E-65 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS09245 9dbc91605b8fb4b58765db853b16df49 309 SUPERFAMILY SSF53613 4 297 9.82E-64 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS09245 9dbc91605b8fb4b58765db853b16df49 309 PANTHER PTHR10584:SF54 13 309 7.6E-144 T 22-04-2016 APECO1_RS09245 9dbc91605b8fb4b58765db853b16df49 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS09245 9dbc91605b8fb4b58765db853b16df49 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 4.4E-97 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APECO1_RS09245 9dbc91605b8fb4b58765db853b16df49 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS09245 9dbc91605b8fb4b58765db853b16df49 309 PANTHER PTHR10584 13 309 7.6E-144 T 22-04-2016 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 Gene3D G3DSA:3.50.50.60 470 533 7.9E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 Gene3D G3DSA:3.50.50.60 190 318 7.9E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 Gene3D G3DSA:3.50.50.60 2 127 7.9E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 60.397 T 22-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 SUPERFAMILY SSF51905 2 293 1.38E-86 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 SUPERFAMILY SSF51905 476 535 1.38E-86 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 Pfam PF00732 GMC oxidoreductase 3 300 1.0E-104 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 Pfam PF05199 GMC oxidoreductase 393 527 8.2E-42 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 PANTHER PTHR11552 2 553 1.3E-262 T 22-04-2016 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 SUPERFAMILY SSF54373 295 477 4.61E-67 T 22-04-2016 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 0.0 T 22-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 PIRSF PIRSF000137 1 538 2.1E-140 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 APECO1_RS01665 d43ed1ea4ce92de50454db9c1aef477d 562 PANTHER PTHR11552:SF135 2 553 1.3E-262 T 22-04-2016 APECO1_RS05465 9e3d442faec54d07c993843dd9f7e77c 317 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 192 1.7E-72 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 APECO1_RS05465 9e3d442faec54d07c993843dd9f7e77c 317 SUPERFAMILY SSF64518 1 315 1.11E-63 T 22-04-2016 APECO1_RS05465 9e3d442faec54d07c993843dd9f7e77c 317 Gene3D G3DSA:1.20.1330.10 217 260 4.5E-22 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APECO1_RS05465 9e3d442faec54d07c993843dd9f7e77c 317 Gene3D G3DSA:1.20.1330.10 69 174 4.5E-22 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APECO1_RS05465 9e3d442faec54d07c993843dd9f7e77c 317 PANTHER PTHR30244 1 316 8.7E-109 T 22-04-2016 APECO1_RS05465 9e3d442faec54d07c993843dd9f7e77c 317 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 2.0E-37 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APECO1_RS05465 9e3d442faec54d07c993843dd9f7e77c 317 PANTHER PTHR30244:SF5 1 316 8.7E-109 T 22-04-2016 APECO1_RS22295 268e0de497971646b24039d835b0da1e 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 343 3.3E-217 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 APECO1_RS22295 268e0de497971646b24039d835b0da1e 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 7 342 2.0E-114 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 APECO1_RS22295 268e0de497971646b24039d835b0da1e 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 46.412 T 22-04-2016 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 SUPERFAMILY SSF52540 274 484 4.95E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 SUPERFAMILY SSF52540 6 230 7.68E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 PANTHER PTHR24220:SF516 9 381 1.3E-231 T 22-04-2016 APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 Pfam PF00005 ABC transporter 23 172 2.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 Pfam PF00005 ABC transporter 275 427 1.4E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 Gene3D G3DSA:3.40.50.300 274 491 7.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 SMART SM00382 281 476 1.6E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 SMART SM00382 32 220 2.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 Gene3D G3DSA:3.40.50.300 3 230 2.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10145 80005a281cc292f75cccb8395b0cd7cd 504 PANTHER PTHR24220 9 381 1.3E-231 T 22-04-2016 APECO1_RS03260 17387cd3dc66369656031bd6fb3604aa 156 Gene3D G3DSA:2.60.120.370 1 153 8.6E-32 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS03260 17387cd3dc66369656031bd6fb3604aa 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 1.5E-27 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS03260 17387cd3dc66369656031bd6fb3604aa 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 1.0E-27 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS03260 17387cd3dc66369656031bd6fb3604aa 156 PANTHER PTHR34986 2 155 8.7E-28 T 22-04-2016 APECO1_RS03260 17387cd3dc66369656031bd6fb3604aa 156 SUPERFAMILY SSF51197 1 154 4.94E-30 T 22-04-2016 APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 SUPERFAMILY SSF52518 317 504 9.94E-58 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 SUPERFAMILY SSF52922 491 619 1.83E-32 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 SUPERFAMILY SSF52518 10 199 3.76E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 SUPERFAMILY SSF52518 243 381 3.76E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 Gene3D G3DSA:3.40.50.970 335 495 1.9E-34 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 PANTHER PTHR11624 241 619 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 Pfam PF02780 Transketolase, C-terminal domain 495 610 2.8E-27 T 22-04-2016 IPR033248 Transketolase, C-terminal domain APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 PANTHER PTHR11624:SF20 241 619 0.0 T 22-04-2016 APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 Gene3D G3DSA:3.40.50.920 496 619 1.6E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 Gene3D G3DSA:3.40.50.970 26 201 3.5E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 Gene3D G3DSA:3.40.50.970 242 334 3.5E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 0.0 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 SMART SM00861 319 484 8.7E-69 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.648 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 5.1E-40 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS02135 2c6d07552b49c5148ceb929e5a7118e9 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 1.3E-116 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS04580 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 1.6E-8 T 22-04-2016 IPR013690 IstB-like ATP binding N-terminal APECO1_RS04580 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF01695 IstB-like ATP binding protein 53 228 1.3E-57 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APECO1_RS04580 5ba390d0e5804538aead3f2b2372c087 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04580 5ba390d0e5804538aead3f2b2372c087 248 PIRSF PIRSF003073 1 247 3.5E-68 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APECO1_RS04580 5ba390d0e5804538aead3f2b2372c087 248 Gene3D G3DSA:3.40.50.300 53 228 6.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04580 5ba390d0e5804538aead3f2b2372c087 248 PANTHER PTHR30050 4 238 2.1E-57 T 22-04-2016 APECO1_RS04580 5ba390d0e5804538aead3f2b2372c087 248 PANTHER PTHR30050:SF6 4 238 2.1E-57 T 22-04-2016 APECO1_RS04580 5ba390d0e5804538aead3f2b2372c087 248 SMART SM00382 97 230 0.0028 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS16040 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 1.6E-8 T 22-04-2016 IPR013690 IstB-like ATP binding N-terminal APECO1_RS16040 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF01695 IstB-like ATP binding protein 53 228 1.3E-57 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APECO1_RS16040 5ba390d0e5804538aead3f2b2372c087 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16040 5ba390d0e5804538aead3f2b2372c087 248 PIRSF PIRSF003073 1 247 3.5E-68 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APECO1_RS16040 5ba390d0e5804538aead3f2b2372c087 248 Gene3D G3DSA:3.40.50.300 53 228 6.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16040 5ba390d0e5804538aead3f2b2372c087 248 PANTHER PTHR30050 4 238 2.1E-57 T 22-04-2016 APECO1_RS16040 5ba390d0e5804538aead3f2b2372c087 248 PANTHER PTHR30050:SF6 4 238 2.1E-57 T 22-04-2016 APECO1_RS16040 5ba390d0e5804538aead3f2b2372c087 248 SMART SM00382 97 230 0.0028 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS11600 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 1.6E-8 T 22-04-2016 IPR013690 IstB-like ATP binding N-terminal APECO1_RS11600 5ba390d0e5804538aead3f2b2372c087 248 Pfam PF01695 IstB-like ATP binding protein 53 228 1.3E-57 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APECO1_RS11600 5ba390d0e5804538aead3f2b2372c087 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11600 5ba390d0e5804538aead3f2b2372c087 248 PIRSF PIRSF003073 1 247 3.5E-68 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APECO1_RS11600 5ba390d0e5804538aead3f2b2372c087 248 Gene3D G3DSA:3.40.50.300 53 228 6.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11600 5ba390d0e5804538aead3f2b2372c087 248 PANTHER PTHR30050 4 238 2.1E-57 T 22-04-2016 APECO1_RS11600 5ba390d0e5804538aead3f2b2372c087 248 PANTHER PTHR30050:SF6 4 238 2.1E-57 T 22-04-2016 APECO1_RS11600 5ba390d0e5804538aead3f2b2372c087 248 SMART SM00382 97 230 0.0028 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS25420 f7268ebf189f3ece92ceb5dce8b311aa 247 SMART SM00635 160 240 2.0E-19 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 APECO1_RS25420 f7268ebf189f3ece92ceb5dce8b311aa 247 SUPERFAMILY SSF49373 157 241 7.85E-7 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS25420 f7268ebf189f3ece92ceb5dce8b311aa 247 Pfam PF16461 Lambda phage tail tube protein, TTP 2 154 3.6E-79 T 22-04-2016 IPR032494 Lambda phage tail tube protein APECO1_RS25420 f7268ebf189f3ece92ceb5dce8b311aa 247 Pfam PF02368 Bacterial Ig-like domain (group 2) 161 238 9.5E-12 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 APECO1_RS25420 f7268ebf189f3ece92ceb5dce8b311aa 247 Gene3D G3DSA:2.60.40.1080 159 243 1.7E-9 T 22-04-2016 APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 SUPERFAMILY SSF50249 176 556 2.63E-116 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 Pfam PF08206 Ribonuclease B OB domain 24 80 2.4E-19 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 Pfam PF00575 S1 RNA binding domain 559 636 2.2E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 2.5E-255 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 SUPERFAMILY SSF50249 8 80 1.39E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 SMART SM00955 189 517 3.0E-129 T 22-04-2016 APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 SUPERFAMILY SSF50249 560 643 1.11E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 SMART SM00357 23 79 1.7E-15 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 PANTHER PTHR23355:SF37 23 643 0.0 T 22-04-2016 APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 SUPERFAMILY SSF50249 83 171 9.42E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 PANTHER PTHR23355 23 643 0.0 T 22-04-2016 APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 Pfam PF00773 RNB domain 189 516 5.1E-85 T 22-04-2016 APECO1_RS07140 3527c1cf4ac600e36ff6942cffda7d00 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.182 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SUPERFAMILY SSF49373 786 880 5.23E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SUPERFAMILY SSF49373 1199 1288 5.49E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Pfam PF09134 Invasin, domain 3 684 783 5.4E-11 T 22-04-2016 IPR015217 Invasin, domain 3 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Pfam PF09134 Invasin, domain 3 893 980 8.2E-11 T 22-04-2016 IPR015217 Invasin, domain 3 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Pfam PF09134 Invasin, domain 3 474 565 3.4E-12 T 22-04-2016 IPR015217 Invasin, domain 3 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Pfam PF09134 Invasin, domain 3 789 885 8.3E-13 T 22-04-2016 IPR015217 Invasin, domain 3 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Pfam PF09134 Invasin, domain 3 579 680 7.0E-16 T 22-04-2016 IPR015217 Invasin, domain 3 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SUPERFAMILY SSF49373 890 986 4.97E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SUPERFAMILY SSF49373 990 1087 1.24E-18 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Pfam PF11924 Invasin beta-domain of outer membrane 76 350 3.1E-114 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SUPERFAMILY SSF49373 474 567 2.2E-10 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Gene3D G3DSA:2.60.40.920 1313 1408 6.5E-6 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Gene3D G3DSA:2.60.40.920 1093 1194 3.1E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SMART SM00634 1097 1188 9.2E-22 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SMART SM00634 583 674 1.9E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SMART SM00634 999 1087 8.0E-24 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SMART SM00634 1199 1290 9.2E-25 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SUPERFAMILY SSF49373 684 780 3.4E-13 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SUPERFAMILY SSF49373 1088 1194 2.55E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 PANTHER PTHR39576 1 453 5.9E-159 T 22-04-2016 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 SUPERFAMILY SSF49373 579 663 1.28E-14 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Pfam PF02369 Bacterial Ig-like domain (group 1) 1099 1185 7.5E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Pfam PF02369 Bacterial Ig-like domain (group 1) 1199 1287 3.9E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Pfam PF02369 Bacterial Ig-like domain (group 1) 999 1086 1.2E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Gene3D G3DSA:2.60.40.920 458 573 1.9E-16 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Gene3D G3DSA:2.60.40.920 1195 1298 6.0E-19 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Gene3D G3DSA:2.60.40.920 783 879 1.9E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Gene3D G3DSA:2.60.40.920 577 675 6.5E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Gene3D G3DSA:2.60.40.920 992 1090 7.4E-24 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Gene3D G3DSA:2.60.40.920 680 781 3.9E-18 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 Gene3D G3DSA:2.60.40.920 885 989 3.8E-20 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 PRINTS PR01369 Intimin signature 386 398 2.5E-14 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 PRINTS PR01369 Intimin signature 230 249 2.5E-14 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 PRINTS PR01369 Intimin signature 298 317 2.5E-14 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 APECO1_RS01580 9467e2a5a23e89ff9dd8ef0c09009dd4 1416 PRINTS PR01369 Intimin signature 202 217 2.5E-14 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 APECO1_RS19640 b3d0eb51d9af43bb4f1451713c68723b 815 PANTHER PTHR11468:SF3 13 815 0.0 T 22-04-2016 APECO1_RS19640 b3d0eb51d9af43bb4f1451713c68723b 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS19640 b3d0eb51d9af43bb4f1451713c68723b 815 Gene3D G3DSA:3.40.50.2000 11 479 5.8E-209 T 22-04-2016 APECO1_RS19640 b3d0eb51d9af43bb4f1451713c68723b 815 SUPERFAMILY SSF53756 9 814 0.0 T 22-04-2016 APECO1_RS19640 b3d0eb51d9af43bb4f1451713c68723b 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS19640 b3d0eb51d9af43bb4f1451713c68723b 815 Gene3D G3DSA:3.40.50.2000 480 795 1.7E-142 T 22-04-2016 APECO1_RS19640 b3d0eb51d9af43bb4f1451713c68723b 815 PANTHER PTHR11468 13 815 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS19640 b3d0eb51d9af43bb4f1451713c68723b 815 PIRSF PIRSF000460 2 815 1.3E-235 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS19640 b3d0eb51d9af43bb4f1451713c68723b 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 SUPERFAMILY SSF64518 285 584 3.92E-38 T 22-04-2016 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 SUPERFAMILY SSF64518 1 353 1.96E-74 T 22-04-2016 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 PANTHER PTHR30244:SF1 2 187 3.3E-127 T 22-04-2016 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 PANTHER PTHR30244:SF1 420 584 3.3E-127 T 22-04-2016 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 Gene3D G3DSA:1.20.1330.10 54 170 5.6E-56 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 Gene3D G3DSA:1.20.1330.10 486 540 5.6E-56 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 Pfam PF12445 Flagellin protein 337 489 1.2E-26 T 22-04-2016 IPR032826 Flagellin, H7-serospecific domain APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.1E-45 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 Pfam PF00700 Bacterial flagellin C-terminal helical region 499 583 5.7E-30 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 PANTHER PTHR30244 2 187 3.3E-127 T 22-04-2016 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 PANTHER PTHR30244 420 584 3.3E-127 T 22-04-2016 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 PRINTS PR00207 Flagellin signature 111 134 2.1E-31 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 PRINTS PR00207 Flagellin signature 37 54 2.1E-31 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APECO1_RS10270 d6124142258e0834595db9525ff501ad 585 PRINTS PR00207 Flagellin signature 76 95 2.1E-31 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APECO1_RS03025 8dc342df9199a8fe6628b7219dd68527 186 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 37 183 7.8E-66 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 APECO1_RS03025 8dc342df9199a8fe6628b7219dd68527 186 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 33 174 1.0E-79 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 APECO1_RS03025 8dc342df9199a8fe6628b7219dd68527 186 SUPERFAMILY SSF56925 26 186 2.59E-82 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS03025 8dc342df9199a8fe6628b7219dd68527 186 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 3 186 42.734 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 APECO1_RS03025 8dc342df9199a8fe6628b7219dd68527 186 Gene3D G3DSA:2.40.160.20 26 186 1.9E-88 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS08205 cfd687fd1fa894ef7f3338804d828ac2 143 SUPERFAMILY SSF82784 1 141 1.57E-41 T 22-04-2016 IPR003718 OsmC/Ohr family APECO1_RS08205 cfd687fd1fa894ef7f3338804d828ac2 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 5.3E-61 T 22-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 APECO1_RS08205 cfd687fd1fa894ef7f3338804d828ac2 143 Pfam PF02566 OsmC-like protein 43 138 3.6E-19 T 22-04-2016 IPR003718 OsmC/Ohr family APECO1_RS08205 cfd687fd1fa894ef7f3338804d828ac2 143 PANTHER PTHR33797 1 143 3.5E-66 T 22-04-2016 APECO1_RS08205 cfd687fd1fa894ef7f3338804d828ac2 143 PANTHER PTHR33797:SF1 1 143 3.5E-66 T 22-04-2016 APECO1_RS08205 cfd687fd1fa894ef7f3338804d828ac2 143 Gene3D G3DSA:3.30.300.20 3 141 6.7E-54 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APECO1_RS08595 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 PANTHER PTHR30561:SF2 1 112 1.9E-77 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 APECO1_RS08595 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 SUPERFAMILY SSF103481 8 107 8.37E-17 T 22-04-2016 APECO1_RS08595 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 PANTHER PTHR30561 1 112 1.9E-77 T 22-04-2016 APECO1_RS08595 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 2 121 29.763 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 APECO1_RS08595 b5a4baf3fdd1848d2adfdb8aa5d83a74 121 Pfam PF00893 Small Multidrug Resistance protein 4 94 3.1E-26 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APECO1_RS23930 b9c81aeb1d57e44be8c785cbc684046a 594 PANTHER PTHR22674 193 382 2.7E-19 T 22-04-2016 APECO1_RS23930 b9c81aeb1d57e44be8c785cbc684046a 594 Gene3D G3DSA:3.40.50.300 175 251 1.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23930 b9c81aeb1d57e44be8c785cbc684046a 594 Gene3D G3DSA:3.40.50.300 34 114 1.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23930 b9c81aeb1d57e44be8c785cbc684046a 594 Pfam PF07693 KAP family P-loop domain 18 379 1.2E-51 T 22-04-2016 IPR011646 KAP family P-loop domain APECO1_RS23930 b9c81aeb1d57e44be8c785cbc684046a 594 SUPERFAMILY SSF52540 34 111 3.46E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23930 b9c81aeb1d57e44be8c785cbc684046a 594 SUPERFAMILY SSF52540 168 289 3.46E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17165 febbcaf400b752d54f7248a622491c58 418 Gene3D G3DSA:3.90.550.10 4 225 2.9E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS17165 febbcaf400b752d54f7248a622491c58 418 PANTHER PTHR21485 4 217 5.2E-44 T 22-04-2016 APECO1_RS17165 febbcaf400b752d54f7248a622491c58 418 SUPERFAMILY SSF53448 4 223 6.57E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS17165 febbcaf400b752d54f7248a622491c58 418 Gene3D G3DSA:3.40.50.1110 226 415 8.7E-30 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APECO1_RS17165 febbcaf400b752d54f7248a622491c58 418 Pfam PF02348 Cytidylyltransferase 6 233 2.0E-29 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APECO1_RS17165 febbcaf400b752d54f7248a622491c58 418 SUPERFAMILY SSF52266 218 417 7.99E-33 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APECO1_RS17165 febbcaf400b752d54f7248a622491c58 418 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 271 407 7.9E-12 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APECO1_RS02605 74f1922b3758ba475b17590394863491 433 PANTHER PTHR11119:SF4 8 431 2.6E-218 T 22-04-2016 APECO1_RS02605 74f1922b3758ba475b17590394863491 433 PANTHER PTHR11119 8 431 2.6E-218 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS02605 74f1922b3758ba475b17590394863491 433 Pfam PF00860 Permease family 9 394 5.7E-98 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS05355 46aeaec8f464c962863c5da2c65b296e 81 Pfam PF06183 DinI-like family 14 78 2.3E-28 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APECO1_RS05355 46aeaec8f464c962863c5da2c65b296e 81 Gene3D G3DSA:3.30.910.10 1 80 2.9E-36 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APECO1_RS05355 46aeaec8f464c962863c5da2c65b296e 81 PANTHER PTHR36572 1 81 4.9E-47 T 22-04-2016 APECO1_RS05355 46aeaec8f464c962863c5da2c65b296e 81 SUPERFAMILY SSF54857 1 80 5.75E-29 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APECO1_RS05355 46aeaec8f464c962863c5da2c65b296e 81 PANTHER PTHR36572:SF2 1 81 4.9E-47 T 22-04-2016 APECO1_RS12675 26e88bb20aa45666ba298fd045b8a027 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.378 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APECO1_RS12675 26e88bb20aa45666ba298fd045b8a027 100 PANTHER PTHR11434:SF4 3 100 1.3E-65 T 22-04-2016 APECO1_RS12675 26e88bb20aa45666ba298fd045b8a027 100 PANTHER PTHR11434 3 100 1.3E-65 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APECO1_RS12675 26e88bb20aa45666ba298fd045b8a027 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 5.0E-21 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APECO1_RS17120 c4a3a9d0cf563cda2d038bd61e2c397d 327 Gene3D G3DSA:3.40.50.10490 24 203 1.9E-48 T 22-04-2016 APECO1_RS17120 c4a3a9d0cf563cda2d038bd61e2c397d 327 Gene3D G3DSA:3.10.580.10 204 325 8.2E-33 T 22-04-2016 APECO1_RS17120 c4a3a9d0cf563cda2d038bd61e2c397d 327 PIRSF PIRSF004692 6 327 3.4E-130 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APECO1_RS17120 c4a3a9d0cf563cda2d038bd61e2c397d 327 Pfam PF00571 CBS domain 279 324 2.1E-7 T 22-04-2016 IPR000644 CBS domain APECO1_RS17120 c4a3a9d0cf563cda2d038bd61e2c397d 327 Pfam PF00571 CBS domain 213 267 3.1E-7 T 22-04-2016 IPR000644 CBS domain APECO1_RS17120 c4a3a9d0cf563cda2d038bd61e2c397d 327 Pfam PF01380 SIS domain 54 184 5.2E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS17120 c4a3a9d0cf563cda2d038bd61e2c397d 327 PANTHER PTHR38418 18 327 5.5E-42 T 22-04-2016 APECO1_RS17120 c4a3a9d0cf563cda2d038bd61e2c397d 327 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 57 323 7.1E-103 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APECO1_RS17120 c4a3a9d0cf563cda2d038bd61e2c397d 327 SUPERFAMILY SSF53697 23 296 4.0E-62 T 22-04-2016 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.3E-17 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 SUPERFAMILY SSF55681 108 287 1.7E-106 T 22-04-2016 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 SUPERFAMILY SSF55681 420 584 1.7E-106 T 22-04-2016 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 SUPERFAMILY SSF55261 288 419 4.58E-48 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 Gene3D G3DSA:3.30.1360.30 276 414 9.3E-49 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 PANTHER PTHR22594 370 571 1.0E-257 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 PANTHER PTHR22594 1 296 1.0E-257 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 1.0E-106 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 37.227 T 22-04-2016 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 Gene3D G3DSA:2.40.50.140 1 106 6.6E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 5.9E-281 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 SUPERFAMILY SSF50249 1 105 1.18E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 Pfam PF02938 GAD domain 307 406 2.0E-32 T 22-04-2016 IPR029351 GAD domain APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 PANTHER PTHR22594:SF5 370 571 1.0E-257 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 PANTHER PTHR22594:SF5 1 296 1.0E-257 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 Gene3D G3DSA:3.30.930.10 415 585 3.5E-112 T 22-04-2016 APECO1_RS09995 a27aa26c03e859b884736b45522b185c 590 Gene3D G3DSA:3.30.930.10 131 275 3.5E-112 T 22-04-2016 APECO1_RS13915 a610e0a9418524829200a75a49dc0507 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 46.983 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS13915 a610e0a9418524829200a75a49dc0507 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 1.8E-39 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS13915 a610e0a9418524829200a75a49dc0507 345 Gene3D G3DSA:3.30.1330.10 22 170 6.9E-62 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS13915 a610e0a9418524829200a75a49dc0507 345 SUPERFAMILY SSF56042 171 341 8.37E-65 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS13915 a610e0a9418524829200a75a49dc0507 345 PANTHER PTHR10520 4 333 1.2E-226 T 22-04-2016 APECO1_RS13915 a610e0a9418524829200a75a49dc0507 345 SUPERFAMILY SSF55326 7 170 1.64E-52 T 22-04-2016 APECO1_RS13915 a610e0a9418524829200a75a49dc0507 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 3.3E-155 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APECO1_RS13915 a610e0a9418524829200a75a49dc0507 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 2.4E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS13915 a610e0a9418524829200a75a49dc0507 345 Gene3D G3DSA:3.90.650.10 171 343 3.4E-69 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS15220 e9df53447dcd9b622dea162926b566bf 143 SUPERFAMILY SSF69118 8 143 1.96E-43 T 22-04-2016 IPR029032 AhpD-like APECO1_RS15220 e9df53447dcd9b622dea162926b566bf 143 Gene3D G3DSA:1.20.1290.10 8 143 8.3E-52 T 22-04-2016 IPR029032 AhpD-like APECO1_RS15220 e9df53447dcd9b622dea162926b566bf 143 PANTHER PTHR34846:SF2 26 142 6.0E-14 T 22-04-2016 APECO1_RS15220 e9df53447dcd9b622dea162926b566bf 143 PANTHER PTHR34846 26 142 6.0E-14 T 22-04-2016 APECO1_RS15220 e9df53447dcd9b622dea162926b566bf 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 94 3.5E-20 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APECO1_RS15220 e9df53447dcd9b622dea162926b566bf 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 77 3.2E-15 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APECO1_RS20945 2e47f6a6e2a4521047315d410be5395c 307 SUPERFAMILY SSF103481 43 148 9.68E-7 T 22-04-2016 APECO1_RS20945 2e47f6a6e2a4521047315d410be5395c 307 PANTHER PTHR22911 1 307 7.7E-74 T 22-04-2016 APECO1_RS20945 2e47f6a6e2a4521047315d410be5395c 307 PANTHER PTHR22911:SF23 1 307 7.7E-74 T 22-04-2016 APECO1_RS20945 2e47f6a6e2a4521047315d410be5395c 307 Pfam PF00892 EamA-like transporter family 158 290 1.5E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS20945 2e47f6a6e2a4521047315d410be5395c 307 Pfam PF00892 EamA-like transporter family 6 145 4.9E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS20945 2e47f6a6e2a4521047315d410be5395c 307 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 18 287 2.3E-78 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 APECO1_RS20945 2e47f6a6e2a4521047315d410be5395c 307 SUPERFAMILY SSF103481 191 296 2.48E-13 T 22-04-2016 APECO1_RS13615 4aac05317a8102d6f20dd92634c9557f 283 SUPERFAMILY SSF53613 18 274 1.56E-59 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS13615 4aac05317a8102d6f20dd92634c9557f 283 Pfam PF08543 Phosphomethylpyrimidine kinase 88 265 2.7E-25 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APECO1_RS13615 4aac05317a8102d6f20dd92634c9557f 283 Hamap MF_01638 Pyridoxine kinase [pdxK]. 1 283 55.625 T 22-04-2016 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS13615 4aac05317a8102d6f20dd92634c9557f 283 PANTHER PTHR10534:SF6 6 276 1.7E-166 T 22-04-2016 APECO1_RS13615 4aac05317a8102d6f20dd92634c9557f 283 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 16 275 2.9E-51 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS13615 4aac05317a8102d6f20dd92634c9557f 283 Gene3D G3DSA:3.40.1190.20 18 276 1.9E-68 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS13615 4aac05317a8102d6f20dd92634c9557f 283 PANTHER PTHR10534 6 276 1.7E-166 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 2 291 3.7E-155 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 160 7.8E-47 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 Gene3D G3DSA:3.40.50.720 1 161 2.9E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 SUPERFAMILY SSF48179 162 289 3.51E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 PANTHER PTHR22981:SF70 1 291 1.1E-136 T 22-04-2016 APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 SUPERFAMILY SSF51735 1 160 6.73E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 PANTHER PTHR22981 1 291 1.1E-136 T 22-04-2016 APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 283 1.5E-36 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 PIRSF PIRSF000103 1 291 3.8E-71 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APECO1_RS02590 6795328f7495837738b36f15db8b99ba 292 Gene3D G3DSA:1.10.1040.10 163 290 4.8E-39 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 Gene3D G3DSA:3.20.20.450 398 638 4.2E-35 T 22-04-2016 IPR001633 EAL domain APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 381 4.5E-12 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 PANTHER PTHR33121:SF16 225 634 3.9E-23 T 22-04-2016 APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 380 2.1E-32 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 SMART SM00052 395 635 2.2E-61 T 22-04-2016 IPR001633 EAL domain APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 Gene3D G3DSA:3.30.70.270 227 391 2.3E-25 T 22-04-2016 APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 6.0E-33 T 22-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 SMART SM00267 213 385 7.9E-43 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 SUPERFAMILY SSF141868 403 642 1.05E-35 T 22-04-2016 IPR001633 EAL domain APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 Pfam PF00563 EAL domain 403 628 8.9E-38 T 22-04-2016 IPR001633 EAL domain APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 SUPERFAMILY SSF55073 230 387 2.28E-22 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS18670 036006813228dbce401fb9329bdc6d38 646 PANTHER PTHR33121 225 634 3.9E-23 T 22-04-2016 APECO1_RS05160 eeca582801c2225b6480897c960ce8d2 262 Gene3D G3DSA:3.40.50.300 57 261 2.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05160 eeca582801c2225b6480897c960ce8d2 262 PANTHER PTHR30473 1 262 2.0E-230 T 22-04-2016 APECO1_RS05160 eeca582801c2225b6480897c960ce8d2 262 Pfam PF02562 PhoH-like protein 57 261 9.5E-77 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 APECO1_RS05160 eeca582801c2225b6480897c960ce8d2 262 PANTHER PTHR30473:SF3 1 262 2.0E-230 T 22-04-2016 APECO1_RS05160 eeca582801c2225b6480897c960ce8d2 262 SUPERFAMILY SSF52540 56 239 1.87E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21710 dda23cf2bb205a9c6ffc65bd6eeb1281 300 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 26 290 8.5E-74 T 22-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase APECO1_RS21710 dda23cf2bb205a9c6ffc65bd6eeb1281 300 PIRSF PIRSF006779 20 296 2.3E-105 T 22-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase APECO1_RS21710 dda23cf2bb205a9c6ffc65bd6eeb1281 300 SUPERFAMILY SSF101852 189 293 2.35E-25 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal APECO1_RS21710 dda23cf2bb205a9c6ffc65bd6eeb1281 300 SUPERFAMILY SSF102522 23 179 2.09E-56 T 22-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal APECO1_RS21710 dda23cf2bb205a9c6ffc65bd6eeb1281 300 Gene3D G3DSA:2.40.30.90 186 294 6.2E-29 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal APECO1_RS21710 dda23cf2bb205a9c6ffc65bd6eeb1281 300 PANTHER PTHR35092:SF2 21 300 2.5E-113 T 22-04-2016 APECO1_RS21710 dda23cf2bb205a9c6ffc65bd6eeb1281 300 PANTHER PTHR35092 21 300 2.5E-113 T 22-04-2016 APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 Pfam PF00571 CBS domain 302 358 8.3E-5 T 22-04-2016 IPR000644 CBS domain APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 Pfam PF00571 CBS domain 372 422 9.7E-7 T 22-04-2016 IPR000644 CBS domain APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 SUPERFAMILY SSF56176 437 521 1.58E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 Pfam PF03741 Integral membrane protein TerC family 14 203 2.2E-50 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 PANTHER PTHR22777:SF14 1 527 0.0 T 22-04-2016 APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 SMART SM01091 439 518 3.0E-25 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 PANTHER PTHR22777 1 527 0.0 T 22-04-2016 APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 SUPERFAMILY SSF54631 290 424 8.73E-27 T 22-04-2016 APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 Gene3D G3DSA:3.10.580.10 288 416 5.8E-15 T 22-04-2016 APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 Pfam PF03471 Transporter associated domain 440 516 2.4E-19 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 SMART SM00116 311 361 4.0 T 22-04-2016 IPR000644 CBS domain APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 SMART SM00116 374 422 2.8 T 22-04-2016 IPR000644 CBS domain APECO1_RS11440 62009d054fa9d9d2b578f39a5ba878fb 527 Gene3D G3DSA:3.30.465.10 417 516 2.6E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS05610 d5d1db229ec4f16d8c3f3ca7b3be09c2 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 3.5E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS05610 d5d1db229ec4f16d8c3f3ca7b3be09c2 85 PANTHER PTHR34156 2 85 1.9E-61 T 22-04-2016 APECO1_RS05610 d5d1db229ec4f16d8c3f3ca7b3be09c2 85 SUPERFAMILY SSF159871 3 85 4.32E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS05610 d5d1db229ec4f16d8c3f3ca7b3be09c2 85 Gene3D G3DSA:3.30.1660.10 18 85 1.5E-26 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS05610 d5d1db229ec4f16d8c3f3ca7b3be09c2 85 PANTHER PTHR34156:SF10 2 85 1.9E-61 T 22-04-2016 APECO1_RS02995 2bf4dbadb6f030f580754e5d6a4776b1 302 PANTHER PTHR32308:SF0 1 302 5.4E-120 T 22-04-2016 APECO1_RS02995 2bf4dbadb6f030f580754e5d6a4776b1 302 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 234 1.9E-83 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 APECO1_RS02995 2bf4dbadb6f030f580754e5d6a4776b1 302 Gene3D G3DSA:3.20.20.60 9 245 1.8E-73 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS02995 2bf4dbadb6f030f580754e5d6a4776b1 302 PIRSF PIRSF015582 1 302 1.0E-75 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like APECO1_RS02995 2bf4dbadb6f030f580754e5d6a4776b1 302 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 12 299 1.7E-136 T 22-04-2016 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 APECO1_RS02995 2bf4dbadb6f030f580754e5d6a4776b1 302 SUPERFAMILY SSF51621 11 244 6.28E-62 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS02995 2bf4dbadb6f030f580754e5d6a4776b1 302 PANTHER PTHR32308 1 302 5.4E-120 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like APECO1_RS18385 94214a9033df8e1cec0b07d02a05275f 323 PANTHER PTHR12001:SF47 8 323 4.3E-128 T 22-04-2016 APECO1_RS18385 94214a9033df8e1cec0b07d02a05275f 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APECO1_RS18385 94214a9033df8e1cec0b07d02a05275f 323 Gene3D G3DSA:1.10.600.10 3 322 1.9E-104 T 22-04-2016 IPR008949 Isoprenoid synthase domain APECO1_RS18385 94214a9033df8e1cec0b07d02a05275f 323 PANTHER PTHR12001 8 323 4.3E-128 T 22-04-2016 IPR017446 Polyprenyl synthetase-related APECO1_RS18385 94214a9033df8e1cec0b07d02a05275f 323 Pfam PF00348 Polyprenyl synthetase 30 263 9.5E-76 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APECO1_RS18385 94214a9033df8e1cec0b07d02a05275f 323 SUPERFAMILY SSF48576 6 322 8.06E-101 T 22-04-2016 IPR008949 Isoprenoid synthase domain APECO1_RS18385 94214a9033df8e1cec0b07d02a05275f 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APECO1_RS04585 f247d3303b4d14364addd49140ab7153 276 Pfam PF04984 Phage tail sheath protein 3 262 1.0E-53 T 22-04-2016 IPR007067 Tail sheath protein APECO1_RS04585 f247d3303b4d14364addd49140ab7153 276 PANTHER PTHR35861 1 274 8.0E-111 T 22-04-2016 APECO1_RS04585 f247d3303b4d14364addd49140ab7153 276 PANTHER PTHR35861:SF1 1 274 8.0E-111 T 22-04-2016 APECO1_RS11595 f247d3303b4d14364addd49140ab7153 276 Pfam PF04984 Phage tail sheath protein 3 262 1.0E-53 T 22-04-2016 IPR007067 Tail sheath protein APECO1_RS11595 f247d3303b4d14364addd49140ab7153 276 PANTHER PTHR35861 1 274 8.0E-111 T 22-04-2016 APECO1_RS11595 f247d3303b4d14364addd49140ab7153 276 PANTHER PTHR35861:SF1 1 274 8.0E-111 T 22-04-2016 APECO1_RS20600 6bffe874abbd7f3339a7a8e731213078 196 PANTHER PTHR37941 1 195 8.7E-58 T 22-04-2016 APECO1_RS20600 6bffe874abbd7f3339a7a8e731213078 196 Gene3D G3DSA:1.20.120.330 22 189 1.5E-79 T 22-04-2016 APECO1_RS20600 6bffe874abbd7f3339a7a8e731213078 196 SUPERFAMILY SSF158668 27 188 6.54E-59 T 22-04-2016 APECO1_RS20600 6bffe874abbd7f3339a7a8e731213078 196 Pfam PF05068 Mannitol repressor 30 188 1.3E-62 T 22-04-2016 IPR007761 Mannitol repressor APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 235 247 8.5E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 8.5E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 315 332 8.5E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 8.5E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 150 161 8.5E-19 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 315 331 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PANTHER PTHR34501 2 363 5.5E-288 T 22-04-2016 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 SUPERFAMILY SSF56935 22 363 3.05E-80 T 22-04-2016 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 Gene3D G3DSA:2.40.160.10 22 363 1.5E-101 T 22-04-2016 IPR023614 Porin domain APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 8.2E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 241 258 8.2E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 8.2E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 148 170 8.2E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 270 289 8.2E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 8.2E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 PANTHER PTHR34501:SF1 2 363 5.5E-288 T 22-04-2016 APECO1_RS12365 b1a869c1508564988660f05a1ce426e9 363 Pfam PF00267 Gram-negative porin 27 363 1.9E-149 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS03245 884a1f2ffa4258b2a97a4732ced1b997 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.893 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APECO1_RS03245 884a1f2ffa4258b2a97a4732ced1b997 266 SUPERFAMILY SSF100950 1 263 6.7E-105 T 22-04-2016 APECO1_RS03245 884a1f2ffa4258b2a97a4732ced1b997 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.5E-144 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APECO1_RS03245 884a1f2ffa4258b2a97a4732ced1b997 266 PANTHER PTHR11280 1 263 1.1E-180 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APECO1_RS03245 884a1f2ffa4258b2a97a4732ced1b997 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 5.9E-22 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APECO1_RS03245 884a1f2ffa4258b2a97a4732ced1b997 266 Gene3D G3DSA:3.40.50.1360 1 264 1.4E-112 T 22-04-2016 APECO1_RS03245 884a1f2ffa4258b2a97a4732ced1b997 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APECO1_RS19720 8b34d5a25e83430876a69f53299c2a29 94 Pfam PF15567 Immunity protein 35 5 83 1.0E-20 T 22-04-2016 IPR029082 Immunity protein 35 APECO1_RS12115 bce844589f7aec391faa2cbb16ced590 563 SUPERFAMILY SSF52794 4 88 1.62E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS12115 bce844589f7aec391faa2cbb16ced590 563 PANTHER PTHR30505 23 560 4.3E-275 T 22-04-2016 APECO1_RS12115 bce844589f7aec391faa2cbb16ced590 563 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 107 190 7.1E-40 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APECO1_RS12115 bce844589f7aec391faa2cbb16ced590 563 Gene3D G3DSA:3.40.50.2300 102 206 2.3E-42 T 22-04-2016 APECO1_RS12115 bce844589f7aec391faa2cbb16ced590 563 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 108 194 1.4E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS12115 bce844589f7aec391faa2cbb16ced590 563 PANTHER PTHR30505:SF0 23 560 4.3E-275 T 22-04-2016 APECO1_RS12115 bce844589f7aec391faa2cbb16ced590 563 Pfam PF02378 Phosphotransferase system, EIIC 233 496 9.4E-19 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS12115 bce844589f7aec391faa2cbb16ced590 563 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 213 552 8.1E-151 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APECO1_RS12115 bce844589f7aec391faa2cbb16ced590 563 SUPERFAMILY SSF52794 105 206 3.84E-35 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS10245 ccfb4a7497fbd98dafee3c38a9c78618 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.7E-34 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS10245 ccfb4a7497fbd98dafee3c38a9c78618 222 SUPERFAMILY SSF161098 13 203 1.31E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS10245 ccfb4a7497fbd98dafee3c38a9c78618 222 Gene3D G3DSA:1.10.3720.10 12 216 2.5E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS10245 ccfb4a7497fbd98dafee3c38a9c78618 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 2.8E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS10245 ccfb4a7497fbd98dafee3c38a9c78618 222 PANTHER PTHR30614 5 220 1.9E-125 T 22-04-2016 APECO1_RS10245 ccfb4a7497fbd98dafee3c38a9c78618 222 PANTHER PTHR30614:SF18 5 220 1.9E-125 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 Gene3D G3DSA:2.40.40.20 603 803 6.4E-52 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615:SF149 1 182 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615:SF149 397 481 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615:SF149 286 380 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615:SF149 665 802 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615:SF149 573 646 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615:SF149 210 247 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 Gene3D G3DSA:3.40.50.740 320 470 9.7E-60 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 Pfam PF00384 Molybdopterin oxidoreductase 2 377 2.6E-21 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615 1 182 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615 397 481 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615 286 380 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615 665 802 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615 573 646 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 PANTHER PTHR11615 210 247 1.0E-303 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 22-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 SUPERFAMILY SSF50692 641 803 4.97E-45 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 Gene3D G3DSA:3.40.228.10 1 108 1.0E-70 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 Gene3D G3DSA:3.40.228.10 152 261 1.0E-70 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 SUPERFAMILY SSF53706 1 638 2.88E-234 T 22-04-2016 APECO1_RS08160 6559a881232f9be0eabe6af35d37e0ea 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 8.2E-17 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS02610 e81e2535eb7ceea48acbd1b8e2ac8739 381 PANTHER PTHR21599:SF4 1 377 2.3E-190 T 22-04-2016 APECO1_RS02610 e81e2535eb7ceea48acbd1b8e2ac8739 381 Pfam PF02595 Glycerate kinase family 3 373 7.2E-146 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS02610 e81e2535eb7ceea48acbd1b8e2ac8739 381 PANTHER PTHR21599 1 377 2.3E-190 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS02610 e81e2535eb7ceea48acbd1b8e2ac8739 381 SUPERFAMILY SSF110738 1 375 4.84E-136 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS02610 e81e2535eb7ceea48acbd1b8e2ac8739 381 PIRSF PIRSF006078 1 376 4.0E-133 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS02610 e81e2535eb7ceea48acbd1b8e2ac8739 381 Gene3D G3DSA:3.90.1510.10 42 275 3.6E-99 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APECO1_RS02610 e81e2535eb7ceea48acbd1b8e2ac8739 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.7E-170 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS21365 8137841048cbc729a6136125735eb677 483 Pfam PF05762 VWA domain containing CoxE-like protein 306 458 1.6E-10 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like APECO1_RS21365 8137841048cbc729a6136125735eb677 483 Hamap MF_01626 Protein ViaA [viaA]. 1 483 60.411 T 22-04-2016 IPR023481 Uncharacterised protein family ViaA APECO1_RS21365 8137841048cbc729a6136125735eb677 483 PANTHER PTHR36846 1 483 8.9E-141 T 22-04-2016 APECO1_RS21365 8137841048cbc729a6136125735eb677 483 SUPERFAMILY SSF53300 318 459 4.79E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS21365 8137841048cbc729a6136125735eb677 483 SMART SM00327 319 483 2.1E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS21880 e42351c71aaa243c0fc9f8fa2fbdcf07 269 PANTHER PTHR17630:SF42 33 265 5.5E-120 T 22-04-2016 APECO1_RS21880 e42351c71aaa243c0fc9f8fa2fbdcf07 269 SUPERFAMILY SSF53474 33 264 3.6E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS21880 e42351c71aaa243c0fc9f8fa2fbdcf07 269 PANTHER PTHR17630 33 265 5.5E-120 T 22-04-2016 APECO1_RS21880 e42351c71aaa243c0fc9f8fa2fbdcf07 269 Pfam PF01738 Dienelactone hydrolase family 42 265 5.8E-78 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 APECO1_RS21880 e42351c71aaa243c0fc9f8fa2fbdcf07 269 Gene3D G3DSA:3.40.50.1820 34 264 4.1E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS11745 4fb159bd103dbaf0e750ffb1d7efc7c4 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 4.0E-75 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APECO1_RS11745 4fb159bd103dbaf0e750ffb1d7efc7c4 350 SMART SM01133 68 326 5.5E-42 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APECO1_RS11745 4fb159bd103dbaf0e750ffb1d7efc7c4 350 SUPERFAMILY SSF51569 56 242 5.13E-66 T 22-04-2016 APECO1_RS11745 4fb159bd103dbaf0e750ffb1d7efc7c4 350 SUPERFAMILY SSF51569 270 344 5.13E-66 T 22-04-2016 APECO1_RS11745 4fb159bd103dbaf0e750ffb1d7efc7c4 350 Gene3D G3DSA:3.20.20.70 52 345 8.8E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS11395 c1eccf67913739186b53f78b4899205a 182 PANTHER PTHR23416:SF36 1 182 6.1E-129 T 22-04-2016 APECO1_RS11395 c1eccf67913739186b53f78b4899205a 182 Gene3D G3DSA:2.160.10.10 21 180 9.9E-42 T 22-04-2016 APECO1_RS11395 c1eccf67913739186b53f78b4899205a 182 TIGRFAM TIGR04008 WcaF: colanic acid biosynthesis acetyltransferase WcaF 1 180 8.6E-121 T 22-04-2016 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00936 APECO1_RS11395 c1eccf67913739186b53f78b4899205a 182 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS11395 c1eccf67913739186b53f78b4899205a 182 SUPERFAMILY SSF51161 21 177 6.65E-38 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS11395 c1eccf67913739186b53f78b4899205a 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 157 9.9E-7 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS11395 c1eccf67913739186b53f78b4899205a 182 PANTHER PTHR23416 1 182 6.1E-129 T 22-04-2016 APECO1_RS19365 fb0526c8bd23ed8050ed6a505eeb00a9 120 SUPERFAMILY SSF63520 15 111 7.32E-7 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS19365 fb0526c8bd23ed8050ed6a505eeb00a9 120 Gene3D G3DSA:1.10.1790.10 15 108 9.0E-7 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS15665 166d79398dc297af7908df9964585539 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 6.0E-21 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS15665 166d79398dc297af7908df9964585539 50 Pfam PF01848 Hok/gef family 5 46 6.0E-19 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS15665 166d79398dc297af7908df9964585539 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 1.322412E-10 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS15665 166d79398dc297af7908df9964585539 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 1.322412E-10 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS06605 e4a9978f3aa4586a84e711727bddb5a4 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 35.64 T 22-04-2016 IPR007376 dsDNA mimic, putative APECO1_RS06605 e4a9978f3aa4586a84e711727bddb5a4 109 Gene3D G3DSA:3.10.450.140 9 109 2.9E-50 T 22-04-2016 IPR007376 dsDNA mimic, putative APECO1_RS06605 e4a9978f3aa4586a84e711727bddb5a4 109 PIRSF PIRSF004916 1 109 8.2E-58 T 22-04-2016 IPR007376 dsDNA mimic, putative APECO1_RS06605 e4a9978f3aa4586a84e711727bddb5a4 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 5.5E-46 T 22-04-2016 IPR007376 dsDNA mimic, putative APECO1_RS06605 e4a9978f3aa4586a84e711727bddb5a4 109 SUPERFAMILY SSF102816 3 109 1.83E-50 T 22-04-2016 IPR007376 dsDNA mimic, putative APECO1_RS06605 e4a9978f3aa4586a84e711727bddb5a4 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 8.0E-53 T 22-04-2016 IPR007376 dsDNA mimic, putative APECO1_RS13710 fb13c61731e75f4a875ed2bacd1b7153 295 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 65 293 9.2E-79 T 22-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 APECO1_RS13710 fb13c61731e75f4a875ed2bacd1b7153 295 PIRSF PIRSF018982 46 295 4.6E-103 T 22-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 APECO1_RS13710 fb13c61731e75f4a875ed2bacd1b7153 295 PANTHER PTHR39330 2 295 1.6E-135 T 22-04-2016 APECO1_RS13710 fb13c61731e75f4a875ed2bacd1b7153 295 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 57 294 40.838 T 22-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 SMART SM00257 97 142 4.4E-6 T 22-04-2016 IPR018392 LysM domain APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 Gene3D G3DSA:3.10.350.10 97 139 8.5E-7 T 22-04-2016 IPR018392 LysM domain APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 SUPERFAMILY SSF51261 169 408 1.88E-69 T 22-04-2016 IPR011055 Duplicated hybrid motif APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 SUPERFAMILY SSF54106 96 139 9.42E-5 T 22-04-2016 IPR018392 LysM domain APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 Pfam PF01476 LysM domain 98 141 2.3E-7 T 22-04-2016 IPR018392 LysM domain APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 Gene3D G3DSA:2.70.70.10 266 409 2.6E-50 T 22-04-2016 APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 2.8E-9 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 Pfam PF01551 Peptidase family M23 313 407 4.5E-33 T 22-04-2016 IPR016047 Peptidase M23 APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 PANTHER PTHR21666 1 434 3.5E-283 T 22-04-2016 APECO1_RS09945 4bc84463339c742e9ca0a93695173902 440 PANTHER PTHR21666:SF207 1 434 3.5E-283 T 22-04-2016 APECO1_RS17740 e2e15b734d4d1bdca288272416229083 99 PANTHER PTHR38040:SF1 2 95 3.8E-42 T 22-04-2016 APECO1_RS17740 e2e15b734d4d1bdca288272416229083 99 Pfam PF04380 Membrane fusogenic activity 1 78 9.5E-29 T 22-04-2016 IPR007475 Membrane fusogenic activity APECO1_RS17740 e2e15b734d4d1bdca288272416229083 99 PANTHER PTHR38040 2 95 3.8E-42 T 22-04-2016 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 SUPERFAMILY SSF48256 22 382 2.22E-124 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 Gene3D G3DSA:1.10.580.10 26 250 6.4E-79 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 ProSitePatterns PS00480 Citrate synthase signature. 271 283 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 PIRSF PIRSF001369 15 389 1.6E-111 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 PANTHER PTHR11739:SF4 22 389 2.5E-159 T 22-04-2016 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 Gene3D G3DSA:1.10.230.10 251 335 5.3E-28 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 21 388 4.9E-168 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 Pfam PF00285 Citrate synthase, C-terminal domain 22 370 5.9E-116 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 PRINTS PR00143 Citrate synthase signature 139 152 1.8E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 PRINTS PR00143 Citrate synthase signature 264 284 1.8E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 PRINTS PR00143 Citrate synthase signature 211 239 1.8E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 PRINTS PR00143 Citrate synthase signature 321 337 1.8E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 PRINTS PR00143 Citrate synthase signature 189 204 1.8E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 PRINTS PR00143 Citrate synthase signature 341 355 1.8E-37 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS01790 4e8d4e0fb4bb0935ee536468abc937c3 389 PANTHER PTHR11739 22 389 2.5E-159 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APECO1_RS07545 725d3fe0dda1fd74df9a0fe4bcb78489 161 PANTHER PTHR39426 2 156 8.7E-40 T 22-04-2016 APECO1_RS07545 725d3fe0dda1fd74df9a0fe4bcb78489 161 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 11 130 1.1E-35 T 22-04-2016 IPR006440 Death on curing protein GO:0016301 APECO1_RS07545 725d3fe0dda1fd74df9a0fe4bcb78489 161 PANTHER PTHR39426:SF1 2 156 8.7E-40 T 22-04-2016 APECO1_RS07545 725d3fe0dda1fd74df9a0fe4bcb78489 161 SUPERFAMILY SSF140931 9 112 1.44E-6 T 22-04-2016 IPR003812 Fido domain APECO1_RS07545 725d3fe0dda1fd74df9a0fe4bcb78489 161 Pfam PF02661 Fic/DOC family 10 93 5.1E-10 T 22-04-2016 IPR003812 Fido domain APECO1_RS07545 725d3fe0dda1fd74df9a0fe4bcb78489 161 Gene3D G3DSA:1.10.3290.10 50 99 9.3E-5 T 22-04-2016 IPR003812 Fido domain APECO1_RS15045 a8b3533ccd3ce18d51a5a16981af2f25 129 PIRSF PIRSF001007 1 125 4.8E-49 T 22-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 APECO1_RS15045 a8b3533ccd3ce18d51a5a16981af2f25 129 SUPERFAMILY SSF103084 2 120 9.55E-30 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS15045 a8b3533ccd3ce18d51a5a16981af2f25 129 Pfam PF05866 Endodeoxyribonuclease RusA 6 118 1.5E-17 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS15045 a8b3533ccd3ce18d51a5a16981af2f25 129 Gene3D G3DSA:3.30.1330.70 1 123 1.5E-35 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS17475 5917cc2556bba37b4f47bb5f05ffcac6 299 PANTHER PTHR11019:SF134 1 298 2.0E-186 T 22-04-2016 APECO1_RS17475 5917cc2556bba37b4f47bb5f05ffcac6 299 PANTHER PTHR11019 1 298 2.0E-186 T 22-04-2016 APECO1_RS17475 5917cc2556bba37b4f47bb5f05ffcac6 299 SMART SM00342 207 290 2.4E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS17475 5917cc2556bba37b4f47bb5f05ffcac6 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 178 5.7E-38 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal APECO1_RS17475 5917cc2556bba37b4f47bb5f05ffcac6 299 Pfam PF12833 Helix-turn-helix domain 213 288 1.6E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS17475 5917cc2556bba37b4f47bb5f05ffcac6 299 SUPERFAMILY SSF46689 191 241 1.15E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS17475 5917cc2556bba37b4f47bb5f05ffcac6 299 Gene3D G3DSA:1.10.10.60 245 288 1.5E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS17475 5917cc2556bba37b4f47bb5f05ffcac6 299 Gene3D G3DSA:1.10.10.60 192 244 1.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS17475 5917cc2556bba37b4f47bb5f05ffcac6 299 SUPERFAMILY SSF46689 243 293 4.21E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 PANTHER PTHR13847 1 63 5.6E-261 T 22-04-2016 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 PANTHER PTHR13847 107 431 5.6E-261 T 22-04-2016 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 SUPERFAMILY SSF54373 269 359 7.85E-17 T 22-04-2016 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 Pfam PF01266 FAD dependent oxidoreductase 2 397 2.0E-69 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 SUPERFAMILY SSF51905 107 271 2.07E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 SUPERFAMILY SSF51905 1 54 2.07E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 SUPERFAMILY SSF51905 359 418 2.07E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 55.739 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 Gene3D G3DSA:3.30.9.10 270 352 8.1E-15 T 22-04-2016 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 Gene3D G3DSA:3.30.9.10 135 193 8.1E-15 T 22-04-2016 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 PANTHER PTHR13847:SF148 1 63 5.6E-261 T 22-04-2016 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 PANTHER PTHR13847:SF148 107 431 5.6E-261 T 22-04-2016 APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 Gene3D G3DSA:3.40.50.720 1 96 5.9E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 Gene3D G3DSA:3.40.50.720 194 269 5.9E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS06280 8c3ed8ebf7b222c131c218715bf9eebe 432 Gene3D G3DSA:3.40.50.720 353 415 5.9E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS14645 7e1f44a0f1bac6fa6c76a7c651989b7a 74 Gene3D G3DSA:1.10.340.30 31 73 0.001 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APECO1_RS08180 86ffb39f6256cc348a1461c7efae08be 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 92 9.0E-20 T 22-04-2016 IPR007711 Toxin HigB-1 APECO1_RS08180 86ffb39f6256cc348a1461c7efae08be 92 PANTHER PTHR40266:SF2 1 92 1.3E-17 T 22-04-2016 APECO1_RS08180 86ffb39f6256cc348a1461c7efae08be 92 PANTHER PTHR40266 1 92 1.3E-17 T 22-04-2016 APECO1_RS08180 86ffb39f6256cc348a1461c7efae08be 92 SUPERFAMILY SSF143011 1 92 7.98E-15 T 22-04-2016 APECO1_RS09745 2e547cbfa43d1e49e46c633015a4edae 188 PANTHER PTHR35529 2 188 6.5E-78 T 22-04-2016 APECO1_RS09745 2e547cbfa43d1e49e46c633015a4edae 188 Pfam PF02659 Putative manganese efflux pump 31 182 1.0E-53 T 22-04-2016 IPR003810 Putative manganese efflux pump APECO1_RS09745 2e547cbfa43d1e49e46c633015a4edae 188 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 185 25.746 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP APECO1_RS10310 9c80a0fc9c3bc14e22f50cbfd441dd24 222 PANTHER PTHR13604 2 222 8.5E-67 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS10310 9c80a0fc9c3bc14e22f50cbfd441dd24 222 Pfam PF02586 SOS response associated peptidase (SRAP) 1 211 2.4E-47 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS10310 9c80a0fc9c3bc14e22f50cbfd441dd24 222 Gene3D G3DSA:3.90.1680.10 1 222 4.0E-65 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS10310 9c80a0fc9c3bc14e22f50cbfd441dd24 222 SUPERFAMILY SSF143081 2 222 3.27E-59 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS23480 d6fc7b2fc394c56903c888911ffb9b9a 194 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 9.2E-63 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 APECO1_RS23480 d6fc7b2fc394c56903c888911ffb9b9a 194 PIRSF PIRSF020680 1 194 3.9E-66 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 APECO1_RS23480 d6fc7b2fc394c56903c888911ffb9b9a 194 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 190 1.7E-61 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 APECO1_RS23480 d6fc7b2fc394c56903c888911ffb9b9a 194 SUPERFAMILY SSF159709 13 193 1.31E-58 T 22-04-2016 APECO1_RS21855 6931e78a3770a5f7a86303fbf2abaacd 474 Gene3D G3DSA:3.90.1710.10 153 300 4.2E-74 T 22-04-2016 APECO1_RS21855 6931e78a3770a5f7a86303fbf2abaacd 474 Gene3D G3DSA:1.10.10.660 91 152 4.7E-37 T 22-04-2016 IPR024033 Uncharacterised domain, YlbE APECO1_RS21855 6931e78a3770a5f7a86303fbf2abaacd 474 Pfam PF06545 Protein of unknown function (DUF1116) 140 354 8.1E-99 T 22-04-2016 IPR009499 Protein of unknown function DUF1116 APECO1_RS21855 6931e78a3770a5f7a86303fbf2abaacd 474 Gene3D G3DSA:3.90.1700.10 302 467 2.7E-74 T 22-04-2016 APECO1_RS12425 929bfe95fd6b73eb3b730b82efcfffb5 549 Pfam PF08486 Stage II sporulation protein 313 374 1.3E-5 T 22-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal APECO1_RS12425 929bfe95fd6b73eb3b730b82efcfffb5 549 Pfam PF10062 Predicted secreted protein (DUF2300) 84 205 1.3E-38 T 22-04-2016 IPR018748 Domain of unknown function DUF2300, secreted APECO1_RS12425 929bfe95fd6b73eb3b730b82efcfffb5 549 Pfam PF10062 Predicted secreted protein (DUF2300) 412 531 3.9E-40 T 22-04-2016 IPR018748 Domain of unknown function DUF2300, secreted APECO1_RS12425 929bfe95fd6b73eb3b730b82efcfffb5 549 SUPERFAMILY SSF56601 52 225 4.6E-8 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS01155 031044435a68a06ad69f3353b2e3ef45 1175 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 33 1172 8.6E-283 T 22-04-2016 IPR017731 Type VI secretion system, IcmF APECO1_RS01155 031044435a68a06ad69f3353b2e3ef45 1175 Pfam PF06744 Type VI secretion protein IcmF C-terminal 928 1123 2.3E-48 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal APECO1_RS01155 031044435a68a06ad69f3353b2e3ef45 1175 Gene3D G3DSA:3.40.50.300 140 297 2.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01155 031044435a68a06ad69f3353b2e3ef45 1175 PANTHER PTHR36153 8 1175 0.0 T 22-04-2016 APECO1_RS01155 031044435a68a06ad69f3353b2e3ef45 1175 Pfam PF06761 Intracellular multiplication and human macrophage-killing 508 819 7.6E-68 T 22-04-2016 IPR009612 ImcF-related APECO1_RS01155 031044435a68a06ad69f3353b2e3ef45 1175 Pfam PF14331 ImcF-related N-terminal domain 210 455 1.6E-59 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain APECO1_RS01155 031044435a68a06ad69f3353b2e3ef45 1175 PANTHER PTHR36153:SF1 8 1175 0.0 T 22-04-2016 APECO1_RS01155 031044435a68a06ad69f3353b2e3ef45 1175 SUPERFAMILY SSF52540 135 287 7.41E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21230 f150dbfee458e398aed1b2bf240ebcfa 240 PANTHER PTHR11280:SF10 1 239 5.0E-167 T 22-04-2016 APECO1_RS21230 f150dbfee458e398aed1b2bf240ebcfa 240 PANTHER PTHR11280 1 239 5.0E-167 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APECO1_RS21230 f150dbfee458e398aed1b2bf240ebcfa 240 SUPERFAMILY SSF100950 1 237 1.57E-56 T 22-04-2016 APECO1_RS21230 f150dbfee458e398aed1b2bf240ebcfa 240 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 113 131 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APECO1_RS21230 f150dbfee458e398aed1b2bf240ebcfa 240 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 14 220 1.7E-15 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APECO1_RS21230 f150dbfee458e398aed1b2bf240ebcfa 240 Gene3D G3DSA:3.40.50.1360 1 237 8.6E-60 T 22-04-2016 APECO1_RS20840 4181cf83cf26ea2fecc18adef347d76c 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.6E-15 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS20840 4181cf83cf26ea2fecc18adef347d76c 91 SUPERFAMILY SSF63562 1 79 8.2E-25 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS20840 4181cf83cf26ea2fecc18adef347d76c 91 Gene3D G3DSA:3.90.940.10 1 78 2.6E-15 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS20840 4181cf83cf26ea2fecc18adef347d76c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.321 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS20840 4181cf83cf26ea2fecc18adef347d76c 91 PANTHER PTHR34476 2 91 7.5E-33 T 22-04-2016 APECO1_RS20840 4181cf83cf26ea2fecc18adef347d76c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-30 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS20840 4181cf83cf26ea2fecc18adef347d76c 91 SMART SM01409 8 61 1.3E-15 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 PANTHER PTHR24422:SF13 14 286 2.7E-162 T 22-04-2016 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 PIRSF PIRSF000410 10 285 5.5E-105 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 Gene3D G3DSA:3.40.50.150 91 282 2.3E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 Pfam PF03705 CheR methyltransferase, all-alpha domain 26 77 9.4E-19 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 PANTHER PTHR24422 14 286 2.7E-162 T 22-04-2016 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 Pfam PF01739 CheR methyltransferase, SAM binding domain 92 280 1.7E-62 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 Gene3D G3DSA:1.10.155.10 14 90 5.9E-34 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 SUPERFAMILY SSF47757 14 91 4.58E-24 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 SMART SM00138 24 284 1.4E-140 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 5.3E-48 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 5.3E-48 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 PRINTS PR00996 Glutamate methyltransferase family signature 46 59 5.3E-48 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 5.3E-48 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 PRINTS PR00996 Glutamate methyltransferase family signature 85 97 5.3E-48 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 5.3E-48 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APECO1_RS10080 7cc65b8887d3911b65f17f7ac973a93e 286 SUPERFAMILY SSF53335 92 281 5.68E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 PIRSF PIRSF001356 1 263 6.4E-156 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 2.4E-30 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 1.3E-148 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 175.398 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 SUPERFAMILY SSF56276 112 173 5.1E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 SUPERFAMILY SSF56276 41 84 5.1E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 PANTHER PTHR33866:SF1 112 263 6.3E-172 T 22-04-2016 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 PANTHER PTHR33866 112 263 6.3E-172 T 22-04-2016 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 PANTHER PTHR33866 15 84 6.3E-172 T 22-04-2016 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 PANTHER PTHR33866:SF1 15 84 6.3E-172 T 22-04-2016 APECO1_RS00660 f39415536b3dfb8db659f958b26477a4 264 Gene3D G3DSA:3.60.90.10 33 186 5.3E-47 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APECO1_RS17715 e2ccd58a65d29e57bb0427ae707fcd17 187 Pfam PF00419 Fimbrial protein 34 187 7.5E-19 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS17715 e2ccd58a65d29e57bb0427ae707fcd17 187 SUPERFAMILY SSF49401 33 187 4.77E-34 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS17715 e2ccd58a65d29e57bb0427ae707fcd17 187 Gene3D G3DSA:2.60.40.1090 32 187 3.4E-38 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS17715 e2ccd58a65d29e57bb0427ae707fcd17 187 PANTHER PTHR33420:SF11 1 187 1.5E-60 T 22-04-2016 APECO1_RS17715 e2ccd58a65d29e57bb0427ae707fcd17 187 PANTHER PTHR33420 1 187 1.5E-60 T 22-04-2016 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Pfam PF02310 B12 binding domain 748 840 3.0E-18 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 1.1E-127 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Gene3D G3DSA:3.20.20.330 3 363 1.8E-128 T 22-04-2016 IPR003726 Homocysteine-binding domain APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 SUPERFAMILY SSF47644 652 739 4.05E-29 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Pfam PF00809 Pterin binding enzyme 360 598 5.8E-62 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 SUPERFAMILY SSF51717 356 630 4.71E-88 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 PIRSF PIRSF000381 1 1195 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Gene3D G3DSA:3.40.50.280 745 894 7.4E-66 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 SUPERFAMILY SSF56507 902 1226 2.88E-136 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Pfam PF02607 B12 binding domain 660 733 3.2E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Gene3D G3DSA:3.10.196.10 957 1227 3.7E-117 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 9.5E-92 T 22-04-2016 IPR003726 Homocysteine-binding domain APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Gene3D G3DSA:1.10.1240.10 650 737 1.9E-40 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 SUPERFAMILY SSF82282 7 399 1.83E-119 T 22-04-2016 IPR003726 Homocysteine-binding domain APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 SUPERFAMILY SSF52242 743 894 2.35E-48 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 PANTHER PTHR21091 12 398 5.5E-169 T 22-04-2016 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 Gene3D G3DSA:3.20.20.20 364 636 6.1E-114 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 PANTHER PTHR21091:SF97 12 398 5.5E-169 T 22-04-2016 APECO1_RS22900 12b36c28bc6d68b2568d9c75bd12e1e8 1227 SMART SM01018 657 740 5.0E-45 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APECO1_RS03145 bc349f7f8df2734ffd8537ed0b956f81 246 SUPERFAMILY SSF161098 24 223 1.1E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03145 bc349f7f8df2734ffd8537ed0b956f81 246 PANTHER PTHR30085 1 244 7.7E-160 T 22-04-2016 APECO1_RS03145 bc349f7f8df2734ffd8537ed0b956f81 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 3.4E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS03145 bc349f7f8df2734ffd8537ed0b956f81 246 Gene3D G3DSA:1.10.3720.10 23 238 7.9E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03145 bc349f7f8df2734ffd8537ed0b956f81 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 238 4.3E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03145 bc349f7f8df2734ffd8537ed0b956f81 246 PANTHER PTHR30085:SF4 1 244 7.7E-160 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 APECO1_RS10070 46c87d695d1bb4dccb2a4f707bac9d32 129 SUPERFAMILY SSF52172 5 125 1.71E-35 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS10070 46c87d695d1bb4dccb2a4f707bac9d32 129 Pfam PF00072 Response regulator receiver domain 9 120 6.3E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS10070 46c87d695d1bb4dccb2a4f707bac9d32 129 SMART SM00448 6 120 6.7E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS10070 46c87d695d1bb4dccb2a4f707bac9d32 129 Gene3D G3DSA:3.40.50.2300 4 126 2.9E-38 T 22-04-2016 APECO1_RS10070 46c87d695d1bb4dccb2a4f707bac9d32 129 PANTHER PTHR26402 6 126 1.3E-41 T 22-04-2016 APECO1_RS03935 91e1fc09c4c0571f784e7272bf3d625a 248 Gene3D G3DSA:3.40.190.10 103 206 8.8E-33 T 22-04-2016 APECO1_RS03935 91e1fc09c4c0571f784e7272bf3d625a 248 SMART SM00062 26 246 5.7E-74 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS03935 91e1fc09c4c0571f784e7272bf3d625a 248 PANTHER PTHR18966 25 248 2.6E-62 T 22-04-2016 APECO1_RS03935 91e1fc09c4c0571f784e7272bf3d625a 248 Gene3D G3DSA:3.40.190.10 24 102 2.8E-48 T 22-04-2016 APECO1_RS03935 91e1fc09c4c0571f784e7272bf3d625a 248 Gene3D G3DSA:3.40.190.10 207 246 2.8E-48 T 22-04-2016 APECO1_RS03935 91e1fc09c4c0571f784e7272bf3d625a 248 SMART SM00079 26 245 1.3E-7 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APECO1_RS03935 91e1fc09c4c0571f784e7272bf3d625a 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APECO1_RS03935 91e1fc09c4c0571f784e7272bf3d625a 248 SUPERFAMILY SSF53850 7 245 8.25E-75 T 22-04-2016 APECO1_RS03935 91e1fc09c4c0571f784e7272bf3d625a 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 1.1E-70 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS01190 7f9e75a0dadb76eb21617bddfe0e9edd 426 SUPERFAMILY SSF49879 10 114 1.57E-6 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 APECO1_RS01190 7f9e75a0dadb76eb21617bddfe0e9edd 426 Gene3D G3DSA:2.60.200.20 8 108 2.3E-5 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 APECO1_RS01190 7f9e75a0dadb76eb21617bddfe0e9edd 426 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 13 418 3.3E-127 T 22-04-2016 IPR017735 Type VI secretion system, FHA domain-containing protein APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 PANTHER PTHR40609:SF2 32 261 5.2E-120 T 22-04-2016 APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 36 261 3.8E-118 T 22-04-2016 IPR030984 Microcompartment protein PduB GO:0005198 APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 PANTHER PTHR40609 32 261 5.2E-120 T 22-04-2016 APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 SUPERFAMILY SSF143414 175 245 1.7E-9 T 22-04-2016 APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 PIRSF PIRSF012290 14 261 1.8E-106 T 22-04-2016 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 SUPERFAMILY SSF143414 69 148 2.09E-9 T 22-04-2016 APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 Pfam PF00936 BMC domain 176 246 1.3E-12 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 Pfam PF00936 BMC domain 70 138 2.4E-10 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 SMART SM00877 175 250 5.3E-13 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS23855 1d7605835ffb8235202bd3e1a81396ab 261 SMART SM00877 69 150 2.4E-10 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS22760 1be19e13ce3b88bcc5950d59cfb7db80 256 PANTHER PTHR34266 1 256 1.9E-158 T 22-04-2016 APECO1_RS22760 1be19e13ce3b88bcc5950d59cfb7db80 256 SUPERFAMILY SSF110399 1 235 8.76E-82 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 APECO1_RS22760 1be19e13ce3b88bcc5950d59cfb7db80 256 Gene3D G3DSA:3.20.20.70 1 254 2.0E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS22760 1be19e13ce3b88bcc5950d59cfb7db80 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 2.0E-110 T 22-04-2016 APECO1_RS22760 1be19e13ce3b88bcc5950d59cfb7db80 256 PANTHER PTHR34266:SF2 1 256 1.9E-158 T 22-04-2016 APECO1_RS22760 1be19e13ce3b88bcc5950d59cfb7db80 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.731 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 13 146 1.1E-57 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 PANTHER PTHR30093 5 150 4.8E-70 T 22-04-2016 APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 Gene3D G3DSA:3.30.700.10 14 78 7.0E-9 T 22-04-2016 APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 PANTHER PTHR30093:SF9 5 150 4.8E-70 T 22-04-2016 APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 Pfam PF08334 Type II secretion system (T2SS), protein G 36 145 2.0E-42 T 22-04-2016 IPR013545 Type II secretion system protein G APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 2.4E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 3.5E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 3.5E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 9 32 3.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17220 6206270ba912172db7ccef5a3637ea08 151 SUPERFAMILY SSF54523 39 146 6.28E-40 T 22-04-2016 APECO1_RS12215 97c3950730c482500df03b8d263116d4 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 47.377 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 APECO1_RS12215 97c3950730c482500df03b8d263116d4 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.9E-99 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 APECO1_RS12215 97c3950730c482500df03b8d263116d4 335 PANTHER PTHR38772 2 335 3.4E-186 T 22-04-2016 APECO1_RS07525 62668d0968169cb4e8bd1fc8a484509d 138 Pfam PF06163 Bacterial protein of unknown function (DUF977) 1 135 5.8E-33 T 22-04-2016 IPR010382 Protein of unknown function DUF977 APECO1_RS25395 4af589aabb0d4fa949a9f139ad0983c5 652 PANTHER PTHR10381 8 229 1.2E-86 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APECO1_RS25395 4af589aabb0d4fa949a9f139ad0983c5 652 PANTHER PTHR10381:SF23 8 229 1.2E-86 T 22-04-2016 APECO1_RS25395 4af589aabb0d4fa949a9f139ad0983c5 652 PRINTS PR00127 Clp protease catalytic subunit P signature 146 165 1.1E-8 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS25395 4af589aabb0d4fa949a9f139ad0983c5 652 PRINTS PR00127 Clp protease catalytic subunit P signature 39 59 1.1E-8 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS25395 4af589aabb0d4fa949a9f139ad0983c5 652 PRINTS PR00127 Clp protease catalytic subunit P signature 70 87 1.1E-8 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS25395 4af589aabb0d4fa949a9f139ad0983c5 652 Pfam PF10124 Mu-like prophage major head subunit gpT 511 584 9.5E-5 T 22-04-2016 IPR018774 Bacteriophage Mu, GpT APECO1_RS25395 4af589aabb0d4fa949a9f139ad0983c5 652 Gene3D G3DSA:3.90.226.10 8 178 5.3E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS25395 4af589aabb0d4fa949a9f139ad0983c5 652 Pfam PF00574 Clp protease 23 168 7.8E-37 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APECO1_RS25395 4af589aabb0d4fa949a9f139ad0983c5 652 SUPERFAMILY SSF52096 7 175 1.04E-47 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS08705 3a427bd5ff7c727430a77fb75c5cfd99 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 1.5E-113 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 APECO1_RS08705 3a427bd5ff7c727430a77fb75c5cfd99 390 Pfam PF00155 Aminotransferase class I and II 30 379 2.2E-59 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS08705 3a427bd5ff7c727430a77fb75c5cfd99 390 PANTHER PTHR11751:SF361 5 389 8.0E-289 T 22-04-2016 APECO1_RS08705 3a427bd5ff7c727430a77fb75c5cfd99 390 Gene3D G3DSA:3.90.1150.10 251 387 8.5E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS08705 3a427bd5ff7c727430a77fb75c5cfd99 390 Gene3D G3DSA:3.40.640.10 44 250 3.7E-42 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS08705 3a427bd5ff7c727430a77fb75c5cfd99 390 PANTHER PTHR11751 5 389 8.0E-289 T 22-04-2016 APECO1_RS08705 3a427bd5ff7c727430a77fb75c5cfd99 390 SUPERFAMILY SSF53383 1 386 6.45E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS05410 12710df2e76489c69ef85f37579fb44c 219 SMART SM00858 95 157 1.5E-8 T 22-04-2016 IPR013974 SAF domain APECO1_RS05410 12710df2e76489c69ef85f37579fb44c 219 PANTHER PTHR36307 1 218 9.7E-49 T 22-04-2016 APECO1_RS05410 12710df2e76489c69ef85f37579fb44c 219 Pfam PF13144 Chaperone for flagella basal body P-ring formation 26 215 1.4E-36 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal APECO1_RS05410 12710df2e76489c69ef85f37579fb44c 219 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 1.7E-36 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal APECO1_RS19680 6e5c840dbf791cfd79f4ff1222c7a038 175 SUPERFAMILY SSF52540 4 172 1.51E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19680 6e5c840dbf791cfd79f4ff1222c7a038 175 Pfam PF01202 Shikimate kinase 17 171 7.9E-12 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS19680 6e5c840dbf791cfd79f4ff1222c7a038 175 PANTHER PTHR11603 1 173 3.6E-150 T 22-04-2016 APECO1_RS19680 6e5c840dbf791cfd79f4ff1222c7a038 175 Gene3D G3DSA:3.40.50.300 4 172 2.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19680 6e5c840dbf791cfd79f4ff1222c7a038 175 PANTHER PTHR11603:SF154 1 173 3.6E-150 T 22-04-2016 APECO1_RS19680 6e5c840dbf791cfd79f4ff1222c7a038 175 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 173 3.0E-72 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 PANTHER PTHR11082 1 320 1.4E-152 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 PANTHER PTHR11082:SF25 1 320 1.4E-152 T 22-04-2016 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 Gene3D G3DSA:1.10.1200.80 252 319 2.6E-17 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 SUPERFAMILY SSF51395 10 319 1.83E-87 T 22-04-2016 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 5.2E-143 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 PIRSF PIRSF006621 1 321 1.6E-99 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 Gene3D G3DSA:3.20.20.70 7 244 7.4E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.407 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 APECO1_RS18760 b4444db13d93a430c75b1f22d9459e45 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 6.5E-117 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS02570 4298361e7774cce96599f947f4c3d064 160 PANTHER PTHR21221 1 160 7.4E-107 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 APECO1_RS02570 4298361e7774cce96599f947f4c3d064 160 Gene3D G3DSA:2.60.120.480 2 155 6.0E-53 T 22-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 APECO1_RS02570 4298361e7774cce96599f947f4c3d064 160 Hamap MF_00616 Ureidoglycolate lyase [allA]. 1 160 37.82 T 22-04-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 APECO1_RS02570 4298361e7774cce96599f947f4c3d064 160 PIRSF PIRSF017306 1 160 9.8E-109 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 APECO1_RS02570 4298361e7774cce96599f947f4c3d064 160 Pfam PF04115 Ureidoglycolate lyase 2 154 1.5E-45 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 APECO1_RS02570 4298361e7774cce96599f947f4c3d064 160 PANTHER PTHR21221:SF2 1 160 7.4E-107 T 22-04-2016 APECO1_RS02570 4298361e7774cce96599f947f4c3d064 160 SUPERFAMILY SSF51182 2 156 2.36E-54 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 SMART SM00382 164 366 4.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 465 9.2E-188 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.1E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 Pfam PF11638 DnaA N-terminal domain 4 64 1.4E-19 T 22-04-2016 IPR024633 DnaA N-terminal domain APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 Gene3D G3DSA:1.10.8.60 298 365 5.6E-30 T 22-04-2016 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 PANTHER PTHR30050 1 104 4.1E-250 T 22-04-2016 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 PANTHER PTHR30050 130 467 4.1E-250 T 22-04-2016 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 SMART SM00760 375 444 6.1E-45 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 SUPERFAMILY SSF52540 133 343 2.22E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 466 34.474 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 SUPERFAMILY SSF48295 363 466 3.66E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 PANTHER PTHR30050:SF2 1 104 4.1E-250 T 22-04-2016 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 PANTHER PTHR30050:SF2 130 467 4.1E-250 T 22-04-2016 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 Gene3D G3DSA:3.40.50.300 122 296 4.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 Pfam PF00308 Bacterial dnaA protein 133 349 3.8E-99 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APECO1_RS21150 d32b2a2387fb39205c9d044690deb228 467 Gene3D G3DSA:1.10.1750.10 366 466 7.3E-43 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.632 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 SUPERFAMILY SSF55653 60 149 1.07E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-59 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 Gene3D G3DSA:3.40.5.10 1 52 1.5E-25 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 SUPERFAMILY SSF55658 1 57 3.31E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.3E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 Gene3D G3DSA:3.10.430.100 61 149 1.7E-28 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 PANTHER PTHR21368 1 149 2.4E-53 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS24425 32db77dafcb2b4bb72dcbe9329a202fe 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 2.1E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal APECO1_RS14720 56a38ea72f0be578bfef7f17b93bd275 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 7.2E-22 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APECO1_RS14720 56a38ea72f0be578bfef7f17b93bd275 113 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 7.1E-36 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APECO1_RS14720 56a38ea72f0be578bfef7f17b93bd275 113 PANTHER PTHR33231:SF3 1 113 1.9E-71 T 22-04-2016 APECO1_RS14720 56a38ea72f0be578bfef7f17b93bd275 113 SUPERFAMILY SSF69754 3 111 8.37E-34 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APECO1_RS14720 56a38ea72f0be578bfef7f17b93bd275 113 PANTHER PTHR33231 1 113 1.9E-71 T 22-04-2016 APECO1_RS14720 56a38ea72f0be578bfef7f17b93bd275 113 Gene3D G3DSA:3.30.160.100 3 91 1.2E-32 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APECO1_RS14320 e4776e4a90b74421af46968294e1b9ec 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 9.9E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APECO1_RS14320 e4776e4a90b74421af46968294e1b9ec 66 PANTHER PTHR37532:SF1 1 66 3.4E-36 T 22-04-2016 APECO1_RS14320 e4776e4a90b74421af46968294e1b9ec 66 SUPERFAMILY SSF140319 3 64 3.79E-27 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APECO1_RS14320 e4776e4a90b74421af46968294e1b9ec 66 PIRSF PIRSF039003 3 66 3.2E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APECO1_RS14320 e4776e4a90b74421af46968294e1b9ec 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 3.1E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APECO1_RS14320 e4776e4a90b74421af46968294e1b9ec 66 Gene3D G3DSA:1.10.10.600 1 66 6.3E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APECO1_RS14320 e4776e4a90b74421af46968294e1b9ec 66 PANTHER PTHR37532 1 66 3.4E-36 T 22-04-2016 APECO1_RS15610 abd6cb9adf4e989af652d31e664f37fa 208 PANTHER PTHR11579 7 203 4.6E-92 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APECO1_RS15610 abd6cb9adf4e989af652d31e664f37fa 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 7.8E-99 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APECO1_RS15610 abd6cb9adf4e989af652d31e664f37fa 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APECO1_RS15610 abd6cb9adf4e989af652d31e664f37fa 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.988 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APECO1_RS15610 abd6cb9adf4e989af652d31e664f37fa 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 5 206 1.9E-81 T 22-04-2016 APECO1_RS15610 abd6cb9adf4e989af652d31e664f37fa 208 SUPERFAMILY SSF53335 12 204 4.87E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS15610 abd6cb9adf4e989af652d31e664f37fa 208 Gene3D G3DSA:3.40.50.150 12 205 2.2E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06090 975bab807d21c340a6b320522d8cc960 275 PANTHER PTHR24220 8 273 2.8E-152 T 22-04-2016 APECO1_RS06090 975bab807d21c340a6b320522d8cc960 275 SMART SM00382 32 248 5.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS06090 975bab807d21c340a6b320522d8cc960 275 Gene3D G3DSA:3.40.50.300 3 235 1.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06090 975bab807d21c340a6b320522d8cc960 275 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS06090 975bab807d21c340a6b320522d8cc960 275 PANTHER PTHR24220:SF533 8 273 2.8E-152 T 22-04-2016 APECO1_RS06090 975bab807d21c340a6b320522d8cc960 275 SUPERFAMILY SSF52540 6 233 1.43E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06090 975bab807d21c340a6b320522d8cc960 275 Pfam PF00005 ABC transporter 23 170 1.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19695 4119975554819a036fe99989730267cd 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 239 4.2E-16 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APECO1_RS19695 4119975554819a036fe99989730267cd 345 PANTHER PTHR22604:SF116 1 336 5.8E-224 T 22-04-2016 APECO1_RS19695 4119975554819a036fe99989730267cd 345 Gene3D G3DSA:3.30.360.10 146 335 3.9E-27 T 22-04-2016 APECO1_RS19695 4119975554819a036fe99989730267cd 345 SUPERFAMILY SSF51735 3 158 1.4E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS19695 4119975554819a036fe99989730267cd 345 SUPERFAMILY SSF55347 130 271 1.46E-20 T 22-04-2016 APECO1_RS19695 4119975554819a036fe99989730267cd 345 Gene3D G3DSA:3.40.50.720 3 145 4.7E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS19695 4119975554819a036fe99989730267cd 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 7.9E-28 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APECO1_RS19695 4119975554819a036fe99989730267cd 345 PANTHER PTHR22604 1 336 5.8E-224 T 22-04-2016 APECO1_RS22790 1f9e3097831fa1489f38be3465c1b3e7 257 PANTHER PTHR22769:SF7 85 257 7.4E-60 T 22-04-2016 APECO1_RS22790 1f9e3097831fa1489f38be3465c1b3e7 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.9E-10 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 APECO1_RS22790 1f9e3097831fa1489f38be3465c1b3e7 257 SUPERFAMILY SSF55811 79 241 2.3E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS22790 1f9e3097831fa1489f38be3465c1b3e7 257 SUPERFAMILY SSF55811 3 96 1.34E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS22790 1f9e3097831fa1489f38be3465c1b3e7 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS22790 1f9e3097831fa1489f38be3465c1b3e7 257 Gene3D G3DSA:3.90.79.10 93 246 2.5E-43 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS22790 1f9e3097831fa1489f38be3465c1b3e7 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 47.856 T 22-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 APECO1_RS22790 1f9e3097831fa1489f38be3465c1b3e7 257 Pfam PF00293 NUDIX domain 132 234 1.0E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS22790 1f9e3097831fa1489f38be3465c1b3e7 257 PANTHER PTHR22769 85 257 7.4E-60 T 22-04-2016 APECO1_RS15525 f0970f28fccf2cd20f9d4245d98d798a 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 372 1.7E-180 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 APECO1_RS15525 f0970f28fccf2cd20f9d4245d98d798a 373 Pfam PF01924 Hydrogenase formation hypA family 15 367 1.1E-151 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 APECO1_RS15525 f0970f28fccf2cd20f9d4245d98d798a 373 PANTHER PTHR30149 2 372 1.9E-213 T 22-04-2016 APECO1_RS15525 f0970f28fccf2cd20f9d4245d98d798a 373 PIRSF PIRSF005622 1 372 3.8E-160 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 APECO1_RS15525 f0970f28fccf2cd20f9d4245d98d798a 373 PANTHER PTHR30149:SF0 2 372 1.9E-213 T 22-04-2016 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 1 83 3.3E-28 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 Pfam PF02772 S-adenosylmethionine synthetase, central domain 97 213 2.4E-41 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 PIRSF PIRSF000497 1 363 4.5E-150 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 Gene3D G3DSA:3.30.300.10 1 117 1.7E-39 T 22-04-2016 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 SUPERFAMILY SSF55973 93 214 2.0E-48 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 1 359 3.9E-167 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 98 108 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 363 48.792 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 SUPERFAMILY SSF55973 1 90 1.29E-31 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 241 249 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 Gene3D G3DSA:3.30.300.10 226 361 2.4E-62 T 22-04-2016 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 SUPERFAMILY SSF55973 215 360 1.61E-65 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 215 351 2.4E-63 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 Gene3D G3DSA:3.30.300.10 118 215 8.3E-40 T 22-04-2016 APECO1_RS23795 aaa32501c19e3de42cfe3f7fbc7570b5 365 PANTHER PTHR11964 1 360 1.4E-216 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APECO1_RS20575 ab62ad045881a1db51ccb8c31c23ddcb 378 PANTHER PTHR30386 1 378 3.2E-158 T 22-04-2016 APECO1_RS20575 ab62ad045881a1db51ccb8c31c23ddcb 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 301 7.3E-9 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS20575 ab62ad045881a1db51ccb8c31c23ddcb 378 SUPERFAMILY SSF111369 198 267 9.29E-12 T 22-04-2016 APECO1_RS20575 ab62ad045881a1db51ccb8c31c23ddcb 378 SUPERFAMILY SSF111369 60 118 9.29E-12 T 22-04-2016 APECO1_RS20575 ab62ad045881a1db51ccb8c31c23ddcb 378 Pfam PF00529 HlyD membrane-fusion protein of T1SS 13 367 1.9E-13 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS20575 ab62ad045881a1db51ccb8c31c23ddcb 378 PANTHER PTHR30386:SF7 1 378 3.2E-158 T 22-04-2016 APECO1_RS20575 ab62ad045881a1db51ccb8c31c23ddcb 378 Gene3D G3DSA:2.40.50.100 66 96 9.1E-13 T 22-04-2016 APECO1_RS20575 ab62ad045881a1db51ccb8c31c23ddcb 378 Gene3D G3DSA:2.40.50.100 219 243 9.1E-13 T 22-04-2016 APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 SUPERFAMILY SSF52540 573 597 2.52E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 SUPERFAMILY SSF52540 38 88 2.52E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 SUPERFAMILY SSF52540 477 542 2.52E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 SMART SM00491 474 603 3.8E-55 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 PANTHER PTHR11472 13 621 9.6E-246 T 22-04-2016 APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 Gene3D G3DSA:3.40.50.300 448 597 2.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 SUPERFAMILY SSF52540 13 232 1.26E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 Pfam PF04851 Type III restriction enzyme, res subunit 18 232 8.0E-6 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 PANTHER PTHR11472:SF37 13 621 9.6E-246 T 22-04-2016 APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 SMART SM00487 16 286 0.0022 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 Gene3D G3DSA:3.40.50.300 190 233 2.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 Gene3D G3DSA:3.40.50.300 8 116 2.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09665 e418102e29198d713f2f8a26d3e6dc21 636 Pfam PF13307 Helicase C-terminal domain 459 616 1.7E-34 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APECO1_RS08925 24ca7fdde295550202e49198b8180a5f 457 Pfam PF01554 MatE 17 177 1.8E-41 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS08925 24ca7fdde295550202e49198b8180a5f 457 Pfam PF01554 MatE 244 405 2.4E-38 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS08925 24ca7fdde295550202e49198b8180a5f 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 54.74 T 22-04-2016 IPR022913 Multidrug resistance protein MdtK APECO1_RS08925 24ca7fdde295550202e49198b8180a5f 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 7.3E-127 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS08925 24ca7fdde295550202e49198b8180a5f 457 PANTHER PTHR11206 2 441 1.6E-235 T 22-04-2016 APECO1_RS08925 24ca7fdde295550202e49198b8180a5f 457 PANTHER PTHR11206:SF153 2 441 1.6E-235 T 22-04-2016 APECO1_RS08925 24ca7fdde295550202e49198b8180a5f 457 PIRSF PIRSF006603 4 453 3.4E-59 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS14380 358ef9478a0f4b54d3036a5a62eb1427 379 SUPERFAMILY SSF103473 7 371 1.23E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS14380 358ef9478a0f4b54d3036a5a62eb1427 379 TIGRFAM TIGR00902 2A0127: MFS transporter, phenyl propionate permease (PPP) family 1 379 1.1E-213 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter APECO1_RS14380 358ef9478a0f4b54d3036a5a62eb1427 379 PANTHER PTHR23522 1 378 5.4E-152 T 22-04-2016 APECO1_RS14380 358ef9478a0f4b54d3036a5a62eb1427 379 PANTHER PTHR23522:SF3 1 378 5.4E-152 T 22-04-2016 APECO1_RS14380 358ef9478a0f4b54d3036a5a62eb1427 379 Pfam PF12832 MFS_1 like family 8 358 2.1E-44 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain APECO1_RS14380 358ef9478a0f4b54d3036a5a62eb1427 379 Gene3D G3DSA:1.20.1250.20 204 371 3.9E-20 T 22-04-2016 APECO1_RS14380 358ef9478a0f4b54d3036a5a62eb1427 379 Gene3D G3DSA:1.20.1250.20 8 182 3.0E-15 T 22-04-2016 APECO1_RS14380 358ef9478a0f4b54d3036a5a62eb1427 379 PIRSF PIRSF004925 1 379 3.6E-121 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 PANTHER PTHR10192 1 410 1.1E-262 T 22-04-2016 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 Gene3D G3DSA:2.40.340.10 330 402 9.7E-35 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 3.6E-34 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 4.3E-40 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 Gene3D G3DSA:3.90.105.10 143 163 1.7E-25 T 22-04-2016 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 Gene3D G3DSA:3.90.105.10 27 50 1.7E-25 T 22-04-2016 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 SUPERFAMILY SSF63882 7 177 6.67E-59 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 Gene3D G3DSA:2.170.190.11 51 142 3.8E-35 T 22-04-2016 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 Gene3D G3DSA:3.40.980.10 164 327 8.8E-65 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 PANTHER PTHR10192:SF11 1 410 1.1E-262 T 22-04-2016 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 SUPERFAMILY SSF53218 178 321 7.85E-44 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 SMART SM00852 181 318 4.9E-44 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 SUPERFAMILY SSF63867 328 407 1.23E-24 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 Pfam PF00994 Probable molybdopterin binding domain 182 317 1.7E-27 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 Pfam PF03454 MoeA C-terminal region (domain IV) 332 404 1.3E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS04015 974d84b2c91cdad70dd4c5b7670772aa 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 SUPERFAMILY SSF51905 372 427 6.2E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 SUPERFAMILY SSF51905 17 180 6.2E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 Gene3D G3DSA:3.50.50.60 16 162 1.4E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 Gene3D G3DSA:3.50.50.60 243 300 1.4E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 Gene3D G3DSA:3.50.50.60 376 450 1.4E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 18 40 4.9E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 51 66 4.9E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 PANTHER PTHR22912 3 63 6.9E-17 T 22-04-2016 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 Pfam PF12831 FAD dependent oxidoreductase 18 448 2.0E-90 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS24970 da2175b90676f6bc4c073be01b4ae746 456 PANTHER PTHR22912:SF179 3 63 6.9E-17 T 22-04-2016 APECO1_RS03035 4dd5a755e2791c6c7a18454ca9bf5dd6 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.396 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APECO1_RS03035 4dd5a755e2791c6c7a18454ca9bf5dd6 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 121 6.6E-45 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APECO1_RS03035 4dd5a755e2791c6c7a18454ca9bf5dd6 127 PANTHER PTHR28259 2 121 5.1E-43 T 22-04-2016 APECO1_RS03035 4dd5a755e2791c6c7a18454ca9bf5dd6 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 5.9E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APECO1_RS22415 e33e309e47c92294ed69b6e0de4a6d79 308 PANTHER PTHR13929:SF0 1 306 5.3E-103 T 22-04-2016 APECO1_RS22415 e33e309e47c92294ed69b6e0de4a6d79 308 PIRSF PIRSF005355 1 306 7.7E-100 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 APECO1_RS22415 e33e309e47c92294ed69b6e0de4a6d79 308 PANTHER PTHR13929 1 306 5.3E-103 T 22-04-2016 APECO1_RS22415 e33e309e47c92294ed69b6e0de4a6d79 308 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 8 301 21.068 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APECO1_RS22415 e33e309e47c92294ed69b6e0de4a6d79 308 Pfam PF01040 UbiA prenyltransferase family 26 273 4.5E-37 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APECO1_RS22415 e33e309e47c92294ed69b6e0de4a6d79 308 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 17 300 8.5E-153 T 22-04-2016 APECO1_RS06200 e2edbd1f9b17cb64a32f3b239ed287a5 108 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 7 108 2.1E-21 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APECO1_RS06200 e2edbd1f9b17cb64a32f3b239ed287a5 108 PANTHER PTHR12338:SF7 1 108 4.8E-54 T 22-04-2016 APECO1_RS06200 e2edbd1f9b17cb64a32f3b239ed287a5 108 Pfam PF03797 Autotransporter beta-domain 4 91 2.0E-11 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS06200 e2edbd1f9b17cb64a32f3b239ed287a5 108 PANTHER PTHR12338 1 108 4.8E-54 T 22-04-2016 APECO1_RS06200 e2edbd1f9b17cb64a32f3b239ed287a5 108 Gene3D G3DSA:2.40.128.130 1 108 5.9E-20 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS06200 e2edbd1f9b17cb64a32f3b239ed287a5 108 SUPERFAMILY SSF103515 4 108 1.05E-12 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS14355 de6f99239b4941ac1360cd737b466eb9 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site APECO1_RS14355 de6f99239b4941ac1360cd737b466eb9 162 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.9E-66 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 APECO1_RS14355 de6f99239b4941ac1360cd737b466eb9 162 Gene3D G3DSA:1.10.10.10 1 134 6.1E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS14355 de6f99239b4941ac1360cd737b466eb9 162 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 162 45.923 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 APECO1_RS14355 de6f99239b4941ac1360cd737b466eb9 162 SUPERFAMILY SSF46785 2 133 6.18E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS14355 de6f99239b4941ac1360cd737b466eb9 162 PANTHER PTHR33221 2 152 3.7E-74 T 22-04-2016 APECO1_RS14355 de6f99239b4941ac1360cd737b466eb9 162 Pfam PF02082 Transcriptional regulator 1 83 2.7E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APECO1_RS14355 de6f99239b4941ac1360cd737b466eb9 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 7.4E-47 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APECO1_RS14355 de6f99239b4941ac1360cd737b466eb9 162 PANTHER PTHR33221:SF1 2 152 3.7E-74 T 22-04-2016 APECO1_RS02395 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.604 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APECO1_RS02395 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Gene3D G3DSA:3.30.1310.10 1 109 1.2E-51 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APECO1_RS02395 a7c2dce10c2ff34d22b8aa674aa75c8c 109 PANTHER PTHR33449 1 109 3.6E-56 T 22-04-2016 APECO1_RS02395 a7c2dce10c2ff34d22b8aa674aa75c8c 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 1.7E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APECO1_RS02395 a7c2dce10c2ff34d22b8aa674aa75c8c 109 SUPERFAMILY SSF82607 11 103 1.44E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APECO1_RS02395 a7c2dce10c2ff34d22b8aa674aa75c8c 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.3E-42 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APECO1_RS02395 a7c2dce10c2ff34d22b8aa674aa75c8c 109 PANTHER PTHR33449:SF1 1 109 3.6E-56 T 22-04-2016 APECO1_RS02395 a7c2dce10c2ff34d22b8aa674aa75c8c 109 PIRSF PIRSF004555 3 109 1.5E-39 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APECO1_RS04305 7423c720e51f5319c9a010571e614496 327 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 14 320 4.4E-166 T 22-04-2016 IPR019857 CRISPR-associated protein Cas1, YPEST subtype APECO1_RS04305 7423c720e51f5319c9a010571e614496 327 Pfam PF01867 CRISPR associated protein Cas1 27 316 1.1E-28 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 APECO1_RS04305 7423c720e51f5319c9a010571e614496 327 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 3 326 9.406 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 APECO1_RS04305 7423c720e51f5319c9a010571e614496 327 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 21 322 4.3E-65 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 APECO1_RS01150 d11aaddbdcde8b0d24e04ba936c78df3 452 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 113 6.7E-20 T 22-04-2016 IPR010657 ImpA, N-terminal APECO1_RS01150 d11aaddbdcde8b0d24e04ba936c78df3 452 PANTHER PTHR37024:SF1 7 205 3.6E-49 T 22-04-2016 APECO1_RS01150 d11aaddbdcde8b0d24e04ba936c78df3 452 Pfam PF12486 Type VI secretion system, EvfB, or VasL 288 433 2.1E-27 T 22-04-2016 IPR021069 ImpA, C-terminal APECO1_RS01150 d11aaddbdcde8b0d24e04ba936c78df3 452 PANTHER PTHR37024 7 205 3.6E-49 T 22-04-2016 APECO1_RS18880 2d79d9ad725796419426e7aaea97526e 190 PANTHER PTHR17490:SF8 4 185 3.6E-117 T 22-04-2016 APECO1_RS18880 2d79d9ad725796419426e7aaea97526e 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 41.06 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 APECO1_RS18880 2d79d9ad725796419426e7aaea97526e 190 Pfam PF01300 Telomere recombination 16 189 9.4E-42 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 APECO1_RS18880 2d79d9ad725796419426e7aaea97526e 190 Gene3D G3DSA:3.90.870.10 3 190 5.1E-55 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APECO1_RS18880 2d79d9ad725796419426e7aaea97526e 190 SUPERFAMILY SSF55821 4 187 3.66E-56 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APECO1_RS18880 2d79d9ad725796419426e7aaea97526e 190 PANTHER PTHR17490 4 185 3.6E-117 T 22-04-2016 APECO1_RS20490 f5ef854849275147dff9964a9a0b435e 282 SMART SM00346 23 113 6.4E-41 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS20490 f5ef854849275147dff9964a9a0b435e 282 Pfam PF09339 IclR helix-turn-helix domain 25 74 4.2E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS20490 f5ef854849275147dff9964a9a0b435e 282 PANTHER PTHR30136:SF19 1 282 4.8E-207 T 22-04-2016 APECO1_RS20490 f5ef854849275147dff9964a9a0b435e 282 PANTHER PTHR30136 1 282 4.8E-207 T 22-04-2016 APECO1_RS20490 f5ef854849275147dff9964a9a0b435e 282 Gene3D G3DSA:1.10.10.10 15 91 4.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20490 f5ef854849275147dff9964a9a0b435e 282 Pfam PF01614 Bacterial transcriptional regulator 143 268 5.3E-45 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APECO1_RS20490 f5ef854849275147dff9964a9a0b435e 282 SUPERFAMILY SSF46785 24 97 1.3E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20490 f5ef854849275147dff9964a9a0b435e 282 SUPERFAMILY SSF55781 90 272 5.43E-46 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS20490 f5ef854849275147dff9964a9a0b435e 282 Gene3D G3DSA:3.30.450.40 92 273 8.6E-57 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.53 T 22-04-2016 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6|UniPathway: UPA00081 APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 SMART SM00922 125 230 1.0E-17 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 PANTHER PTHR13794:SF4 1 382 3.6E-159 T 22-04-2016 APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Pfam PF13378 Enolase C-terminal domain-like 135 355 2.3E-53 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 9.1E-31 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 SUPERFAMILY SSF54826 1 112 1.13E-32 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 PANTHER PTHR13794 1 382 3.6E-159 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Gene3D G3DSA:3.20.20.120 117 341 1.5E-76 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 SUPERFAMILY SSF51604 95 359 4.85E-72 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS21095 2c4bc2a637e0f55c1b8382b99ba2a64b 382 Gene3D G3DSA:3.30.390.10 1 116 2.5E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS24400 d65578b90f9ff9693fd0afcf7c4d1870 91 PANTHER PTHR34156:SF6 1 91 4.0E-60 T 22-04-2016 APECO1_RS24400 d65578b90f9ff9693fd0afcf7c4d1870 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 2.0E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS24400 d65578b90f9ff9693fd0afcf7c4d1870 91 Gene3D G3DSA:3.30.1660.10 23 91 1.1E-25 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS24400 d65578b90f9ff9693fd0afcf7c4d1870 91 SUPERFAMILY SSF159871 3 91 3.27E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS24400 d65578b90f9ff9693fd0afcf7c4d1870 91 PANTHER PTHR34156 1 91 4.0E-60 T 22-04-2016 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 SMART SM00981 56 154 1.2E-19 T 22-04-2016 IPR004114 THUMP domain GO:0003723 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 Pfam PF02926 THUMP domain 23 153 2.9E-20 T 22-04-2016 IPR004114 THUMP domain GO:0003723 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 4.8E-5 T 22-04-2016 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 4.8E-5 T 22-04-2016 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 Gene3D G3DSA:3.40.50.150 432 700 2.5E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 SUPERFAMILY SSF53335 396 698 1.14E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 PIRSF PIRSF037618 1 702 9.7E-296 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 SUPERFAMILY SSF53335 145 217 7.6E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 SUPERFAMILY SSF53335 258 373 7.6E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 475 658 7.6E-20 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.733 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 1.1E-64 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 PANTHER PTHR18895:SF62 401 681 1.9E-135 T 22-04-2016 APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 Gene3D G3DSA:3.40.50.150 147 214 4.3E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 Gene3D G3DSA:3.40.50.150 255 334 4.3E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04820 518b9079a2201521928404eed51db9e0 702 PANTHER PTHR18895 401 681 1.9E-135 T 22-04-2016 APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 PIRSF PIRSF005303 1 322 3.2E-87 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 299 1.8E-9 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 PANTHER PTHR30270 1 325 1.3E-152 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 PANTHER PTHR30270:SF0 1 325 1.3E-152 T 22-04-2016 APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 SUPERFAMILY SSF56042 143 307 1.38E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 Gene3D G3DSA:3.90.650.10 145 322 1.1E-54 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 Gene3D G3DSA:3.30.1330.10 3 139 8.3E-46 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 SUPERFAMILY SSF55326 4 138 1.41E-34 T 22-04-2016 APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 5.6E-120 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.431 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APECO1_RS02120 dad5c3404a7cbb501851087af9277516 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 4.8E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS17990 fa1a4201301f9503dd5d51aa06fb8a10 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 5.8E-31 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB APECO1_RS17990 fa1a4201301f9503dd5d51aa06fb8a10 101 PANTHER PTHR35893:SF2 1 101 2.9E-74 T 22-04-2016 APECO1_RS17990 fa1a4201301f9503dd5d51aa06fb8a10 101 PANTHER PTHR35893 1 101 2.9E-74 T 22-04-2016 APECO1_RS16110 d30873a739c2df2ac2ba927f00aadad0 526 SUPERFAMILY SSF55604 449 524 2.09E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS16110 d30873a739c2df2ac2ba927f00aadad0 526 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 412 509 9.8E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS16110 d30873a739c2df2ac2ba927f00aadad0 526 Pfam PF02378 Phosphotransferase system, EIIC 14 353 1.2E-74 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS16110 d30873a739c2df2ac2ba927f00aadad0 526 PANTHER PTHR30009 7 519 3.3E-128 T 22-04-2016 APECO1_RS16110 d30873a739c2df2ac2ba927f00aadad0 526 Gene3D G3DSA:3.30.1360.60 448 524 8.9E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS16110 d30873a739c2df2ac2ba927f00aadad0 526 PANTHER PTHR30009:SF1 7 519 3.3E-128 T 22-04-2016 APECO1_RS16110 d30873a739c2df2ac2ba927f00aadad0 526 Pfam PF00367 phosphotransferase system, EIIB 452 484 3.8E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS16110 d30873a739c2df2ac2ba927f00aadad0 526 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 462 479 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS14445 a5364b8750f40c6ba3fc39407f5b7580 237 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 27 218 4.0E-93 T 22-04-2016 APECO1_RS14445 a5364b8750f40c6ba3fc39407f5b7580 237 Pfam PF13942 YfhG lipoprotein 45 217 3.9E-76 T 22-04-2016 IPR025262 Quorum-sensing regulator protein G APECO1_RS25490 34e29f4f7976980d5e73dac15cf967bc 196 Pfam PF02796 Helix-turn-helix domain of resolvase 147 190 6.0E-11 T 22-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 APECO1_RS25490 34e29f4f7976980d5e73dac15cf967bc 196 Pfam PF00239 Resolvase, N terminal domain 5 144 3.9E-36 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APECO1_RS25490 34e29f4f7976980d5e73dac15cf967bc 196 Gene3D G3DSA:1.10.10.60 146 189 1.1E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS25490 34e29f4f7976980d5e73dac15cf967bc 196 PANTHER PTHR30461 3 192 6.7E-56 T 22-04-2016 APECO1_RS25490 34e29f4f7976980d5e73dac15cf967bc 196 ProSitePatterns PS00398 Site-specific recombinases signature 2. 63 75 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 APECO1_RS25490 34e29f4f7976980d5e73dac15cf967bc 196 SMART SM00857 4 145 4.2E-49 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APECO1_RS25490 34e29f4f7976980d5e73dac15cf967bc 196 SUPERFAMILY SSF46689 147 187 5.73E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS25490 34e29f4f7976980d5e73dac15cf967bc 196 Gene3D G3DSA:3.40.50.1390 3 127 1.3E-35 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APECO1_RS25490 34e29f4f7976980d5e73dac15cf967bc 196 SUPERFAMILY SSF53041 3 144 2.62E-37 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 SUPERFAMILY SSF51905 40 276 1.6E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 SUPERFAMILY SSF51905 441 498 1.6E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 Gene3D G3DSA:3.50.50.60 433 493 1.2E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 Gene3D G3DSA:3.50.50.60 40 279 1.2E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 Pfam PF00890 FAD binding domain 46 475 7.5E-19 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 PANTHER PTHR11632:SF6 3 561 2.4E-52 T 22-04-2016 APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 PANTHER PTHR11632 3 561 2.4E-52 T 22-04-2016 APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 Gene3D G3DSA:1.20.58.100 518 591 3.0E-4 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 45 64 1.4E-6 T 22-04-2016 APECO1_RS23110 01c71859bbd39b696e70d2cbba7fc31f 682 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 462 1.4E-6 T 22-04-2016 APECO1_RS01340 44d85376964d57b5eb45933d8948df1f 379 SUPERFAMILY SSF103365 8 372 2.88E-105 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APECO1_RS01340 44d85376964d57b5eb45933d8948df1f 379 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 12 367 8.5E-188 T 22-04-2016 IPR017510 Release factor H-coupled RctB family protein APECO1_RS01340 44d85376964d57b5eb45933d8948df1f 379 PANTHER PTHR11118 19 373 3.5E-96 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APECO1_RS01340 44d85376964d57b5eb45933d8948df1f 379 Pfam PF01139 tRNA-splicing ligase RtcB 110 372 4.5E-59 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APECO1_RS01340 44d85376964d57b5eb45933d8948df1f 379 Pfam PF01139 tRNA-splicing ligase RtcB 29 101 1.8E-10 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APECO1_RS25450 d607b3b86b6686601303538fbe09f922 199 Gene3D G3DSA:3.90.1720.10 67 179 5.4E-17 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS25450 d607b3b86b6686601303538fbe09f922 199 PANTHER PTHR34858:SF1 1 182 5.2E-53 T 22-04-2016 APECO1_RS25450 d607b3b86b6686601303538fbe09f922 199 Gene3D G3DSA:3.40.140.10 10 66 9.2E-9 T 22-04-2016 APECO1_RS25450 d607b3b86b6686601303538fbe09f922 199 Pfam PF00877 NlpC/P60 family 63 175 4.0E-13 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS25450 d607b3b86b6686601303538fbe09f922 199 PANTHER PTHR34858 1 182 5.2E-53 T 22-04-2016 APECO1_RS25450 d607b3b86b6686601303538fbe09f922 199 SUPERFAMILY SSF102712 3 49 1.01E-8 T 22-04-2016 APECO1_RS25450 d607b3b86b6686601303538fbe09f922 199 SUPERFAMILY SSF54001 53 180 2.8E-17 T 22-04-2016 APECO1_RS20740 f5830fd3002f2815885618f0869cadb2 338 Pfam PF08437 Glycosyl transferase family 8 C-terminal 279 335 3.0E-23 T 22-04-2016 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 UniPathway: UPA00958 APECO1_RS20740 f5830fd3002f2815885618f0869cadb2 338 Pfam PF01501 Glycosyl transferase family 8 31 277 4.8E-70 T 22-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 APECO1_RS20740 f5830fd3002f2815885618f0869cadb2 338 Gene3D G3DSA:3.90.550.10 30 300 3.1E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS20740 f5830fd3002f2815885618f0869cadb2 338 PANTHER PTHR13778:SF10 5 313 1.2E-74 T 22-04-2016 APECO1_RS20740 f5830fd3002f2815885618f0869cadb2 338 PANTHER PTHR13778 5 313 1.2E-74 T 22-04-2016 APECO1_RS20740 f5830fd3002f2815885618f0869cadb2 338 SUPERFAMILY SSF53448 31 300 1.21E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS08545 e21e7e5abaf4cc0ebc3cbacd0366826a 204 PANTHER PTHR34227 1 204 8.2E-103 T 22-04-2016 APECO1_RS08545 e21e7e5abaf4cc0ebc3cbacd0366826a 204 Pfam PF02613 Nitrate reductase delta subunit 51 163 3.3E-23 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS08545 e21e7e5abaf4cc0ebc3cbacd0366826a 204 Gene3D G3DSA:1.10.3480.10 4 204 1.8E-62 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS08545 e21e7e5abaf4cc0ebc3cbacd0366826a 204 PANTHER PTHR34227:SF5 1 204 8.2E-103 T 22-04-2016 APECO1_RS08545 e21e7e5abaf4cc0ebc3cbacd0366826a 204 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 5 204 41.869 T 22-04-2016 IPR028611 Tat proofreading chaperone DmsD GO:0005048 APECO1_RS08545 e21e7e5abaf4cc0ebc3cbacd0366826a 204 SUPERFAMILY SSF89155 3 200 5.36E-58 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS08545 e21e7e5abaf4cc0ebc3cbacd0366826a 204 PIRSF PIRSF004690 2 204 1.9E-63 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type APECO1_RS00690 2598500e69621de88d63518ae2dfba2f 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APECO1_RS00690 2598500e69621de88d63518ae2dfba2f 220 Pfam PF00484 Carbonic anhydrase 38 187 2.9E-50 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APECO1_RS00690 2598500e69621de88d63518ae2dfba2f 220 PANTHER PTHR11002 1 207 2.8E-180 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APECO1_RS00690 2598500e69621de88d63518ae2dfba2f 220 SMART SM00947 30 192 1.3E-69 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APECO1_RS00690 2598500e69621de88d63518ae2dfba2f 220 SUPERFAMILY SSF53056 2 211 3.4E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APECO1_RS00690 2598500e69621de88d63518ae2dfba2f 220 PANTHER PTHR11002:SF23 1 207 2.8E-180 T 22-04-2016 APECO1_RS00690 2598500e69621de88d63518ae2dfba2f 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APECO1_RS00690 2598500e69621de88d63518ae2dfba2f 220 Gene3D G3DSA:3.40.1050.10 1 216 2.6E-77 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 SUPERFAMILY SSF50129 1 173 2.28E-54 T 22-04-2016 IPR011032 GroES-like APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 2.5E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.2E-31 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 61.264 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 PANTHER PTHR11695 13 341 5.3E-163 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 SMART SM00829 12 338 1.4E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 SUPERFAMILY SSF51735 141 305 4.49E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 PANTHER PTHR11695:SF285 13 341 5.3E-163 T 22-04-2016 APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 Gene3D G3DSA:3.90.180.10 1 172 1.1E-51 T 22-04-2016 IPR011032 GroES-like APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 6.5E-192 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 APECO1_RS20690 1d71819d7db9781f8d65e35d185ffe70 341 Gene3D G3DSA:3.40.50.720 173 287 4.8E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 Pfam PF03150 Di-haem cytochrome c peroxidase 185 332 1.2E-47 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 PANTHER PTHR30600:SF7 48 463 2.2E-198 T 22-04-2016 APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 Gene3D G3DSA:1.10.760.10 337 460 3.4E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 Gene3D G3DSA:1.10.760.10 174 336 1.1E-50 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 Pfam PF00034 Cytochrome c 340 453 3.4E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 SMART SM01235 16 155 9.3E-54 T 22-04-2016 IPR025992 Haem-binding domain APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 SUPERFAMILY SSF46626 170 320 3.63E-46 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 SUPERFAMILY SSF46626 319 460 4.73E-40 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 PANTHER PTHR30600 48 463 2.2E-198 T 22-04-2016 APECO1_RS20165 30cfa9d5586337452fe7e7c762cd6c4b 465 Pfam PF14376 Haem-binding domain 18 152 6.3E-34 T 22-04-2016 IPR025992 Haem-binding domain APECO1_RS01205 0f727cb682c0d40c943e5ecc25380a3c 141 SUPERFAMILY SSF160719 32 135 3.14E-18 T 22-04-2016 APECO1_RS01205 0f727cb682c0d40c943e5ecc25380a3c 141 Pfam PF04965 Gene 25-like lysozyme 32 119 3.0E-15 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD APECO1_RS01205 0f727cb682c0d40c943e5ecc25380a3c 141 Gene3D G3DSA:3.10.450.40 33 132 5.4E-14 T 22-04-2016 APECO1_RS01205 0f727cb682c0d40c943e5ecc25380a3c 141 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 10 140 1.6E-39 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein APECO1_RS18050 806d23732eecf3a07d4a5478b9c46f34 129 SUPERFAMILY SSF55298 3 127 4.87E-42 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APECO1_RS18050 806d23732eecf3a07d4a5478b9c46f34 129 PANTHER PTHR11803 1 129 4.2E-52 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APECO1_RS18050 806d23732eecf3a07d4a5478b9c46f34 129 Gene3D G3DSA:3.30.1330.40 2 127 3.5E-46 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APECO1_RS18050 806d23732eecf3a07d4a5478b9c46f34 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 22-04-2016 IPR019897 RidA, conserved site APECO1_RS18050 806d23732eecf3a07d4a5478b9c46f34 129 Pfam PF01042 Endoribonuclease L-PSP 8 126 3.3E-44 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APECO1_RS18050 806d23732eecf3a07d4a5478b9c46f34 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 126 5.4E-54 T 22-04-2016 IPR006056 RidA family APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 1.0E-31 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 PANTHER PTHR10000 1 270 4.9E-169 T 22-04-2016 APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 Gene3D G3DSA:3.40.50.1000 184 269 4.0E-61 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 Gene3D G3DSA:3.40.50.1000 1 76 4.0E-61 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 22-04-2016 APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.1E-76 T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 PANTHER PTHR10000:SF29 1 270 4.9E-169 T 22-04-2016 APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 1.9E-67 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 SUPERFAMILY SSF56784 1 269 1.88E-76 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS21120 5ead7332b2e590892871a22450e06376 270 Gene3D G3DSA:3.30.1240.10 88 183 3.1E-41 T 22-04-2016 APECO1_RS03900 1cdf8418689d7da7fec5502da3634bab 225 SUPERFAMILY SSF51197 4 177 3.79E-9 T 22-04-2016 APECO1_RS03900 1cdf8418689d7da7fec5502da3634bab 225 PANTHER PTHR41536:SF1 2 225 4.4E-137 T 22-04-2016 APECO1_RS03900 1cdf8418689d7da7fec5502da3634bab 225 SMART SM00702 1 176 2.1E-34 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 APECO1_RS03900 1cdf8418689d7da7fec5502da3634bab 225 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 225 45.881 T 22-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 APECO1_RS03900 1cdf8418689d7da7fec5502da3634bab 225 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 175 6.8E-15 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APECO1_RS03900 1cdf8418689d7da7fec5502da3634bab 225 PANTHER PTHR41536 2 225 4.4E-137 T 22-04-2016 APECO1_RS04595 4121b82578f17e12df74c89b43ed5747 91 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 7 85 8.8E-11 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative APECO1_RS22385 18467adf8b90bba7057ff4216453ba64 248 PANTHER PTHR19370:SF98 4 227 1.5E-121 T 22-04-2016 APECO1_RS22385 18467adf8b90bba7057ff4216453ba64 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 3.2E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APECO1_RS22385 18467adf8b90bba7057ff4216453ba64 248 SUPERFAMILY SSF63380 3 100 1.43E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APECO1_RS22385 18467adf8b90bba7057ff4216453ba64 248 Gene3D G3DSA:3.40.50.80 97 248 1.3E-47 T 22-04-2016 APECO1_RS22385 18467adf8b90bba7057ff4216453ba64 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.3E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APECO1_RS22385 18467adf8b90bba7057ff4216453ba64 248 Gene3D G3DSA:2.40.30.10 2 96 1.3E-32 T 22-04-2016 APECO1_RS22385 18467adf8b90bba7057ff4216453ba64 248 PANTHER PTHR19370 4 227 1.5E-121 T 22-04-2016 APECO1_RS22385 18467adf8b90bba7057ff4216453ba64 248 SUPERFAMILY SSF52343 103 248 2.62E-38 T 22-04-2016 APECO1_RS18630 c638711cbdded3bee890efdd9a8123be 481 Pfam PF01523 Putative modulator of DNA gyrase 36 332 2.0E-63 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS18630 c638711cbdded3bee890efdd9a8123be 481 PIRSF PIRSF004919 14 481 1.9E-158 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS18630 c638711cbdded3bee890efdd9a8123be 481 PANTHER PTHR30624 9 481 1.3E-264 T 22-04-2016 APECO1_RS18630 c638711cbdded3bee890efdd9a8123be 481 SUPERFAMILY SSF111283 22 480 1.57E-132 T 22-04-2016 APECO1_RS18630 c638711cbdded3bee890efdd9a8123be 481 PANTHER PTHR30624:SF4 9 481 1.3E-264 T 22-04-2016 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PANTHER PTHR11686 5 577 3.4E-244 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PANTHER PTHR11686:SF9 5 577 3.4E-244 T 22-04-2016 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 46 568 8.4E-237 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 Pfam PF01019 Gamma-glutamyltranspeptidase 61 569 1.9E-191 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 SUPERFAMILY SSF56235 38 569 3.86E-197 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 406 9.7E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 258 274 9.7E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 477 494 9.7E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 288 307 9.7E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 159 178 9.7E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 68 93 9.7E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 412 430 9.7E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 141 159 9.7E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 453 468 9.7E-81 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS19725 992b8fc9c4dc4ea004215cd783e3e983 577 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 388 412 - T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 Gene3D G3DSA:2.60.40.1180 408 491 6.0E-31 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 SMART SM00642 4 402 5.0E-58 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 416 491 6.4E-6 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 SUPERFAMILY SSF51011 405 491 1.03E-29 T 22-04-2016 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 Gene3D G3DSA:3.20.20.80 2 406 4.0E-69 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 PANTHER PTHR10357:SF156 6 110 1.6E-183 T 22-04-2016 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 PANTHER PTHR10357:SF156 160 491 1.6E-183 T 22-04-2016 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 PIRSF PIRSF001021 1 494 3.1E-208 T 22-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 SUPERFAMILY SSF51445 6 378 7.83E-88 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 Pfam PF00128 Alpha amylase, catalytic domain 28 367 1.5E-20 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 PANTHER PTHR10357 6 110 1.6E-183 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS10290 a754d9bad04d88ee66592042aa6a9456 495 PANTHER PTHR10357 160 491 1.6E-183 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS09615 455f98bebfeb521aa6aa9acd749a3b4e 82 PANTHER PTHR33884 1 82 1.4E-37 T 22-04-2016 APECO1_RS09615 455f98bebfeb521aa6aa9acd749a3b4e 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.7E-17 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 APECO1_RS09615 455f98bebfeb521aa6aa9acd749a3b4e 82 PANTHER PTHR33884:SF1 1 82 1.4E-37 T 22-04-2016 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 Gene3D G3DSA:3.30.9.10 212 314 7.5E-53 T 22-04-2016 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 Gene3D G3DSA:3.30.9.10 59 146 7.5E-53 T 22-04-2016 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 PANTHER PTHR10961 1 372 7.7E-115 T 22-04-2016 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 PANTHER PTHR10961:SF7 1 372 7.7E-115 T 22-04-2016 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 Gene3D G3DSA:3.50.50.60 147 209 8.2E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 Gene3D G3DSA:3.50.50.60 1 57 8.2E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 Gene3D G3DSA:3.50.50.60 317 372 8.2E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 372 75.851 T 22-04-2016 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 Pfam PF01266 FAD dependent oxidoreductase 4 352 4.1E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 SUPERFAMILY SSF51905 2 217 4.75E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 SUPERFAMILY SSF51905 314 371 4.75E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS05345 237c92954283279e961fe9a6231ad4e4 372 SUPERFAMILY SSF54373 213 314 4.71E-17 T 22-04-2016 APECO1_RS13610 eee28c230b565de59322e7a02f56dcc3 169 SUPERFAMILY SSF51261 12 167 4.36E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif APECO1_RS13610 eee28c230b565de59322e7a02f56dcc3 169 Gene3D G3DSA:2.70.70.10 14 167 1.8E-60 T 22-04-2016 APECO1_RS13610 eee28c230b565de59322e7a02f56dcc3 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.9E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS13610 eee28c230b565de59322e7a02f56dcc3 169 PANTHER PTHR30175 1 118 8.7E-58 T 22-04-2016 APECO1_RS13610 eee28c230b565de59322e7a02f56dcc3 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.0E-51 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS13610 eee28c230b565de59322e7a02f56dcc3 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 PANTHER PTHR11706 7 412 7.2E-260 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 3.3E-99 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 6.3E-127 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 PANTHER PTHR11706:SF42 7 412 7.2E-260 T 22-04-2016 APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.3E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.3E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.3E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.3E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.3E-29 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APECO1_RS13480 c2e754c9a91b75c862fef2772e28db8c 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 39.192 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APECO1_RS05730 8b4f643342053b0d571d149f88d7f625 217 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 45 216 1.0E-60 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APECO1_RS05730 8b4f643342053b0d571d149f88d7f625 217 PANTHER PTHR21600 5 142 5.1E-103 T 22-04-2016 APECO1_RS05730 8b4f643342053b0d571d149f88d7f625 217 PANTHER PTHR21600 160 213 5.1E-103 T 22-04-2016 APECO1_RS05730 8b4f643342053b0d571d149f88d7f625 217 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 76 90 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APECO1_RS05730 8b4f643342053b0d571d149f88d7f625 217 SUPERFAMILY SSF55120 38 215 1.33E-42 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS05730 8b4f643342053b0d571d149f88d7f625 217 PANTHER PTHR21600:SF23 5 142 5.1E-103 T 22-04-2016 APECO1_RS05730 8b4f643342053b0d571d149f88d7f625 217 PANTHER PTHR21600:SF23 160 213 5.1E-103 T 22-04-2016 APECO1_RS05730 8b4f643342053b0d571d149f88d7f625 217 Pfam PF00849 RNA pseudouridylate synthase 41 186 4.5E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 PANTHER PTHR11451 1 319 1.8E-103 T 22-04-2016 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 Gene3D G3DSA:1.10.1160.10 233 314 1.2E-36 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.1E-124 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 Gene3D G3DSA:1.10.10.350 363 462 1.2E-31 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 Gene3D G3DSA:3.90.800.10 69 180 1.1E-39 T 22-04-2016 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 Gene3D G3DSA:3.40.50.620 2 68 4.7E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 Gene3D G3DSA:3.40.50.620 181 231 4.7E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 463 2.1E-212 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 34.142 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 5.902938E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 5.902938E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.902938E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.902938E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.902938E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 SUPERFAMILY SSF48163 299 461 8.76E-46 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APECO1_RS13515 f1b1c1be117b4d15bf177f4575bab2fb 471 SUPERFAMILY SSF52374 3 298 4.56E-114 T 22-04-2016 APECO1_RS16645 ae0be99beb547c04624d8e2d28047874 306 PANTHER PTHR11358:SF26 10 301 8.7E-110 T 22-04-2016 APECO1_RS16645 ae0be99beb547c04624d8e2d28047874 306 Gene3D G3DSA:3.40.800.10 11 302 4.0E-97 T 22-04-2016 IPR023696 Ureohydrolase domain APECO1_RS16645 ae0be99beb547c04624d8e2d28047874 306 Pfam PF00491 Arginase family 34 297 9.2E-86 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APECO1_RS16645 ae0be99beb547c04624d8e2d28047874 306 PANTHER PTHR11358 10 301 8.7E-110 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APECO1_RS16645 ae0be99beb547c04624d8e2d28047874 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 APECO1_RS16645 ae0be99beb547c04624d8e2d28047874 306 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 9.6E-119 T 22-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 APECO1_RS16645 ae0be99beb547c04624d8e2d28047874 306 PIRSF PIRSF036979 12 304 6.8E-102 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APECO1_RS16645 ae0be99beb547c04624d8e2d28047874 306 Hamap MF_01418 Agmatinase [speB]. 1 304 70.558 T 22-04-2016 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 APECO1_RS16645 ae0be99beb547c04624d8e2d28047874 306 SUPERFAMILY SSF52768 13 301 4.5E-91 T 22-04-2016 APECO1_RS05930 3c780bcdb1054c3c777f61879fd4eb58 165 SUPERFAMILY SSF53955 17 163 1.79E-54 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS05930 3c780bcdb1054c3c777f61879fd4eb58 165 Gene3D G3DSA:1.10.530.40 34 163 2.7E-54 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 APECO1_RS05930 3c780bcdb1054c3c777f61879fd4eb58 165 PANTHER PTHR38107:SF2 1 165 8.9E-79 T 22-04-2016 APECO1_RS05930 3c780bcdb1054c3c777f61879fd4eb58 165 PANTHER PTHR38107 1 165 8.9E-79 T 22-04-2016 APECO1_RS05930 3c780bcdb1054c3c777f61879fd4eb58 165 Pfam PF00959 Phage lysozyme 48 154 1.7E-32 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 PANTHER PTHR18901 1 200 2.3E-93 T 22-04-2016 APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 190 6.4E-19 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 1.2E-22 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 Gene3D G3DSA:3.40.50.1000 1 16 8.6E-32 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 Gene3D G3DSA:3.40.50.1000 96 208 8.6E-32 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 Gene3D G3DSA:1.10.150.240 17 92 4.1E-27 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 4 190 1.6E-67 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 SUPERFAMILY SSF56784 3 198 1.65E-42 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 3.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 3.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 PANTHER PTHR18901:SF19 1 200 2.3E-93 T 22-04-2016 APECO1_RS07290 7a3bac556131ca5278c4bb3c1286248e 219 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 3 191 1.7E-80 T 22-04-2016 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-6317|MetaCyc: PWY-7459 APECO1_RS03640 b6bc9f3056db3fd9c81f53233d013fcd 350 Pfam PF00793 DAHP synthetase I family 38 338 1.3E-112 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APECO1_RS03640 b6bc9f3056db3fd9c81f53233d013fcd 350 PIRSF PIRSF001361 1 350 1.3E-167 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS03640 b6bc9f3056db3fd9c81f53233d013fcd 350 Gene3D G3DSA:3.20.20.70 9 349 1.2E-163 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS03640 b6bc9f3056db3fd9c81f53233d013fcd 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.9E-183 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS03640 b6bc9f3056db3fd9c81f53233d013fcd 350 PANTHER PTHR21225 1 349 7.9E-279 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS03640 b6bc9f3056db3fd9c81f53233d013fcd 350 SUPERFAMILY SSF51569 7 348 9.32E-141 T 22-04-2016 APECO1_RS03640 b6bc9f3056db3fd9c81f53233d013fcd 350 PANTHER PTHR21225:SF7 1 349 7.9E-279 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 515 532 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 PANTHER PTHR11615 460 835 0.0 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 PANTHER PTHR11615 1 321 0.0 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 PANTHER PTHR11615 340 439 0.0 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 730 757 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 Gene3D G3DSA:3.40.228.10 197 407 1.1E-51 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 SUPERFAMILY SSF53706 57 674 2.36E-161 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 7 835 0.0 T 22-04-2016 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 Pfam PF01568 Molydopterin dinucleotide binding domain 690 811 7.1E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 Gene3D G3DSA:3.90.55.10 517 620 7.1E-34 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 PANTHER PTHR11615:SF133 460 835 0.0 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 PANTHER PTHR11615:SF133 1 321 0.0 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 PANTHER PTHR11615:SF133 340 439 0.0 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 Gene3D G3DSA:2.40.40.20 663 827 4.2E-59 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 Gene3D G3DSA:3.40.50.740 408 516 7.9E-48 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 Gene3D G3DSA:3.40.50.740 92 193 7.9E-48 T 22-04-2016 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 Pfam PF00384 Molybdopterin oxidoreductase 99 572 1.6E-105 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 SUPERFAMILY SSF50692 684 832 3.39E-44 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS05045 6ecc236947c52631d4c95163348ac6f3 848 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 56 835 0.0 T 22-04-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 APECO1_RS22410 09de6da6b58575e022e59620ac8a4c4e 161 Gene3D G3DSA:3.50.30.40 1 156 3.8E-46 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APECO1_RS22410 09de6da6b58575e022e59620ac8a4c4e 161 PANTHER PTHR33254:SF7 1 161 1.7E-109 T 22-04-2016 APECO1_RS22410 09de6da6b58575e022e59620ac8a4c4e 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 1.3E-36 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APECO1_RS22410 09de6da6b58575e022e59620ac8a4c4e 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 6.6E-90 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 APECO1_RS22410 09de6da6b58575e022e59620ac8a4c4e 161 SUPERFAMILY SSF89562 2 158 7.06E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APECO1_RS22410 09de6da6b58575e022e59620ac8a4c4e 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.865 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 APECO1_RS22410 09de6da6b58575e022e59620ac8a4c4e 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.0E-62 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 APECO1_RS22410 09de6da6b58575e022e59620ac8a4c4e 161 PANTHER PTHR33254 1 161 1.7E-109 T 22-04-2016 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 PANTHER PTHR11019 20 282 2.0E-179 T 22-04-2016 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 282 52.5 T 22-04-2016 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 SUPERFAMILY SSF46689 228 276 8.06E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 Pfam PF12833 Helix-turn-helix domain 199 275 9.8E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 3.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 3.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 SUPERFAMILY SSF46689 177 227 8.15E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 PANTHER PTHR11019:SF107 20 282 2.0E-179 T 22-04-2016 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 Gene3D G3DSA:2.60.120.280 27 162 1.9E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 SMART SM00342 192 275 6.9E-32 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 Gene3D G3DSA:1.10.10.60 171 228 9.2E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 SUPERFAMILY SSF51182 7 154 3.91E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 Gene3D G3DSA:1.10.10.60 229 276 7.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22290 f4b2fc2ec3b027a6054fa7b250847f39 282 Pfam PF02311 AraC-like ligand binding domain 23 140 4.2E-22 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APECO1_RS16455 e0325ef50a69a1d0c677adb2e29fff2d 219 Pfam PF03006 Haemolysin-III related 12 209 2.3E-37 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APECO1_RS16455 e0325ef50a69a1d0c677adb2e29fff2d 219 PANTHER PTHR20855:SF3 15 216 1.4E-72 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 APECO1_RS16455 e0325ef50a69a1d0c677adb2e29fff2d 219 PANTHER PTHR20855 15 216 1.4E-72 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APECO1_RS16455 e0325ef50a69a1d0c677adb2e29fff2d 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 1.2E-72 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 APECO1_RS16735 ad470f3f509a19e537edc85bd31c3789 197 Pfam PF01725 Ham1 family 4 191 9.9E-57 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APECO1_RS16735 ad470f3f509a19e537edc85bd31c3789 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 52.034 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APECO1_RS16735 ad470f3f509a19e537edc85bd31c3789 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 5.1E-73 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APECO1_RS16735 ad470f3f509a19e537edc85bd31c3789 197 PANTHER PTHR11067 1 196 5.7E-91 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APECO1_RS16735 ad470f3f509a19e537edc85bd31c3789 197 Gene3D G3DSA:3.90.950.10 1 195 1.7E-84 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APECO1_RS16735 ad470f3f509a19e537edc85bd31c3789 197 PANTHER PTHR11067:SF9 1 196 5.7E-91 T 22-04-2016 APECO1_RS16735 ad470f3f509a19e537edc85bd31c3789 197 SUPERFAMILY SSF52972 1 195 9.68E-76 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APECO1_RS17930 ceb83eaea746dfc385e5c910dbcbfc16 230 PANTHER PTHR30336 1 230 5.0E-181 T 22-04-2016 APECO1_RS17930 ceb83eaea746dfc385e5c910dbcbfc16 230 Pfam PF02698 DUF218 domain 64 176 2.3E-19 T 22-04-2016 IPR003848 Domain of unknown function DUF218 APECO1_RS17930 ceb83eaea746dfc385e5c910dbcbfc16 230 PANTHER PTHR30336:SF6 1 230 5.0E-181 T 22-04-2016 APECO1_RS17930 ceb83eaea746dfc385e5c910dbcbfc16 230 Gene3D G3DSA:3.40.50.620 74 172 1.3E-10 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-41 T 22-04-2016 APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.6E-100 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 SMART SM00322 60 125 1.6E-6 T 22-04-2016 IPR004087 K Homology domain GO:0003676 APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.1140.32 108 207 5.9E-48 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 PANTHER PTHR11760:SF19 2 233 1.3E-149 T 22-04-2016 APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.300.20 18 107 1.1E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF07650 KH domain 38 111 9.5E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54821 108 206 6.93E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.15 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 PANTHER PTHR11760 2 233 1.3E-149 T 22-04-2016 APECO1_RS19040 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54814 2 106 1.6E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APECO1_RS23145 beabbb2a688d17c26783de66e59517c7 185 Pfam PF04973 Nicotinamide mononucleotide transporter 3 180 2.2E-46 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APECO1_RS23145 beabbb2a688d17c26783de66e59517c7 185 PANTHER PTHR36122 1 185 9.7E-37 T 22-04-2016 APECO1_RS23145 beabbb2a688d17c26783de66e59517c7 185 PANTHER PTHR36122:SF1 1 185 9.7E-37 T 22-04-2016 APECO1_RS23145 beabbb2a688d17c26783de66e59517c7 185 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 3 181 1.1E-21 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APECO1_RS22080 3480cd573d47a9957acf9fa3fe3f7b3c 210 Pfam PF01926 50S ribosome-binding GTPase 28 146 8.5E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS22080 3480cd573d47a9957acf9fa3fe3f7b3c 210 SUPERFAMILY SSF52540 17 198 3.42E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22080 3480cd573d47a9957acf9fa3fe3f7b3c 210 PANTHER PTHR11649 2 206 4.5E-59 T 22-04-2016 APECO1_RS22080 3480cd573d47a9957acf9fa3fe3f7b3c 210 Gene3D G3DSA:3.40.50.300 6 198 1.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22080 3480cd573d47a9957acf9fa3fe3f7b3c 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.758 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APECO1_RS22080 3480cd573d47a9957acf9fa3fe3f7b3c 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 7.1E-76 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 PANTHER PTHR23508 6 228 0.0 T 22-04-2016 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 PANTHER PTHR23508 266 478 0.0 T 22-04-2016 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 Gene3D G3DSA:1.20.1250.20 273 450 6.1E-16 T 22-04-2016 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 Gene3D G3DSA:1.20.1250.20 17 202 3.9E-32 T 22-04-2016 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 PANTHER PTHR23508:SF3 6 228 0.0 T 22-04-2016 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 PANTHER PTHR23508:SF3 266 478 0.0 T 22-04-2016 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 TIGRFAM TIGR00891 2A0112: MFS transporter, sialate:H+ symporter (SHS) family 9 442 9.4E-194 T 22-04-2016 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 Pfam PF07690 Major Facilitator Superfamily 26 287 1.9E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 Hamap MF_01238 Putative sialic acid transporter [nanT]. 1 488 55.958 T 22-04-2016 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 SUPERFAMILY SSF103473 267 452 3.27E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS18535 3575d8462e2ad4bbdadc4bf6af301f38 496 SUPERFAMILY SSF103473 8 203 3.27E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS03530 b9f03a52e78ffa0c5f3d4d4301c34388 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 3.9E-210 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APECO1_RS03530 b9f03a52e78ffa0c5f3d4d4301c34388 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 7.5E-112 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APECO1_RS03530 b9f03a52e78ffa0c5f3d4d4301c34388 379 PANTHER PTHR30365:SF6 1 379 4.2E-203 T 22-04-2016 APECO1_RS03530 b9f03a52e78ffa0c5f3d4d4301c34388 379 PANTHER PTHR30365 1 379 4.2E-203 T 22-04-2016 APECO1_RS03530 b9f03a52e78ffa0c5f3d4d4301c34388 379 PIRSF PIRSF000267 2 378 6.5E-137 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APECO1_RS21600 45c5cf657784bdcee3a32b7984f0df06 246 PANTHER PTHR34136:SF1 2 240 5.4E-104 T 22-04-2016 APECO1_RS21600 45c5cf657784bdcee3a32b7984f0df06 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 66 231 2.2E-53 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 APECO1_RS21600 45c5cf657784bdcee3a32b7984f0df06 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 60.885 T 22-04-2016 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 APECO1_RS21600 45c5cf657784bdcee3a32b7984f0df06 246 PANTHER PTHR34136 2 240 5.4E-104 T 22-04-2016 APECO1_RS21600 45c5cf657784bdcee3a32b7984f0df06 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 9.6E-82 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 APECO1_RS09280 68c359d55d559528829177f51c90d467 80 Hamap MF_01580 Cell division activator CedA [cedA]. 1 80 37.647 T 22-04-2016 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 APECO1_RS09280 68c359d55d559528829177f51c90d467 80 Pfam PF10729 Cell division activator CedA 3 78 1.1E-45 T 22-04-2016 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 SMART SM00363 7 68 1.2E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 Pfam PF01479 S4 domain 7 52 5.5E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 PANTHER PTHR21600:SF24 1 264 4.5E-152 T 22-04-2016 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 4.9E-54 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 SUPERFAMILY SSF55120 69 229 2.37E-38 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 Pfam PF00849 RNA pseudouridylate synthase 69 195 5.1E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 PANTHER PTHR21600 1 264 4.5E-152 T 22-04-2016 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 Gene3D G3DSA:3.10.290.10 6 60 6.0E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS22965 c6b243224139cd4ff7b42a70519a2bdf 290 SUPERFAMILY SSF55174 7 62 5.72E-14 T 22-04-2016 APECO1_RS13005 5dbbf721907153af1906875c65e17d27 446 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 446 2.2E-155 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) APECO1_RS13005 5dbbf721907153af1906875c65e17d27 446 Gene3D G3DSA:2.40.160.60 26 446 2.1E-141 T 22-04-2016 APECO1_RS13005 5dbbf721907153af1906875c65e17d27 446 SUPERFAMILY SSF56935 26 446 1.6E-114 T 22-04-2016 APECO1_RS13005 5dbbf721907153af1906875c65e17d27 446 PANTHER PTHR35093 3 446 0.0 T 22-04-2016 APECO1_RS13005 5dbbf721907153af1906875c65e17d27 446 PANTHER PTHR35093:SF3 3 446 0.0 T 22-04-2016 APECO1_RS20140 e1312420412aa2874eb17739de4e32f7 385 Gene3D G3DSA:2.40.50.100 169 203 5.6E-22 T 22-04-2016 APECO1_RS20140 e1312420412aa2874eb17739de4e32f7 385 Gene3D G3DSA:2.40.50.100 61 94 5.6E-22 T 22-04-2016 APECO1_RS20140 e1312420412aa2874eb17739de4e32f7 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 356 1.3E-9 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS20140 e1312420412aa2874eb17739de4e32f7 385 PANTHER PTHR30158:SF3 1 381 2.8E-188 T 22-04-2016 APECO1_RS20140 e1312420412aa2874eb17739de4e32f7 385 PANTHER PTHR30158 1 381 2.8E-188 T 22-04-2016 APECO1_RS20140 e1312420412aa2874eb17739de4e32f7 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 369 7.9E-80 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS20140 e1312420412aa2874eb17739de4e32f7 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 289 6.9E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS20140 e1312420412aa2874eb17739de4e32f7 385 SUPERFAMILY SSF111369 50 296 7.19E-81 T 22-04-2016 APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 Pfam PF00576 HIUase/Transthyretin family 29 136 4.2E-38 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 SMART SM00095 24 136 8.1E-4 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 ProSitePatterns PS00769 Transthyretin signature 2. 120 132 - T 22-04-2016 IPR023419 Transthyretin, conserved site APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 Gene3D G3DSA:2.60.40.180 25 137 5.1E-44 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 PANTHER PTHR10395 23 137 1.2E-45 T 22-04-2016 APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 ProSitePatterns PS00768 Transthyretin signature 1. 32 47 - T 22-04-2016 IPR023418 Transthyretin, thyroxine binding site APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 PRINTS PR00189 Transthyretin signature 28 48 1.1E-13 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 PRINTS PR00189 Transthyretin signature 115 137 1.1E-13 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 PRINTS PR00189 Transthyretin signature 60 85 1.1E-13 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 27 137 5.9E-45 T 22-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 PANTHER PTHR10395:SF7 23 137 1.2E-45 T 22-04-2016 APECO1_RS10500 d2746611cc5570bac58fe123700fa606 137 SUPERFAMILY SSF49472 26 137 3.66E-43 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 PANTHER PTHR32071:SF3 1 513 1.9E-211 T 22-04-2016 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 SMART SM00091 80 147 2.1E-4 T 22-04-2016 IPR000014 PAS domain APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 Gene3D G3DSA:1.10.10.60 450 507 2.2E-28 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 SMART SM00382 226 363 7.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 SUPERFAMILY SSF55021 2 69 3.51E-5 T 22-04-2016 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 PANTHER PTHR32071 1 513 1.9E-211 T 22-04-2016 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 SUPERFAMILY SSF46689 454 507 4.93E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 SUPERFAMILY SSF52540 206 440 3.38E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 Gene3D G3DSA:3.30.450.20 78 183 2.4E-14 T 22-04-2016 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 Gene3D G3DSA:3.40.50.300 203 371 1.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 SUPERFAMILY SSF55785 82 174 1.47E-8 T 22-04-2016 IPR000014 PAS domain APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 Pfam PF00158 Sigma-54 interaction domain 207 365 1.1E-55 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 Pfam PF13188 PAS domain 82 135 6.8E-5 T 22-04-2016 IPR000014 PAS domain APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 Gene3D G3DSA:1.10.8.60 372 442 7.0E-19 T 22-04-2016 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 460 507 2.3E-28 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 APECO1_RS07320 48fd5e744227f9792c45c859d7ac0687 513 Gene3D G3DSA:3.30.70.260 2 68 2.3E-5 T 22-04-2016 APECO1_RS00320 fc63d1f4f94bb3c023f8785f47c453de 219 PANTHER PTHR11079:SF86 3 218 6.3E-81 T 22-04-2016 APECO1_RS00320 fc63d1f4f94bb3c023f8785f47c453de 219 SUPERFAMILY SSF55120 8 216 1.17E-63 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS00320 fc63d1f4f94bb3c023f8785f47c453de 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 6 218 7.2E-61 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS00320 fc63d1f4f94bb3c023f8785f47c453de 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 5.4E-30 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS00320 fc63d1f4f94bb3c023f8785f47c453de 219 PANTHER PTHR11079 3 218 6.3E-81 T 22-04-2016 APECO1_RS00320 fc63d1f4f94bb3c023f8785f47c453de 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS22940 ab20af98c43bf5eaf536fa3df4f523d4 265 PANTHER PTHR32502:SF4 1 265 3.7E-127 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS22940 ab20af98c43bf5eaf536fa3df4f523d4 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 2.6E-72 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS22940 ab20af98c43bf5eaf536fa3df4f523d4 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 264 1.7E-127 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS22940 ab20af98c43bf5eaf536fa3df4f523d4 265 PANTHER PTHR32502 1 265 3.7E-127 T 22-04-2016 APECO1_RS21375 a2ea77af70193144cfef5c74f92f70d7 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.363 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup APECO1_RS21375 a2ea77af70193144cfef5c74f92f70d7 622 PANTHER PTHR30540:SF7 16 622 3.3E-281 T 22-04-2016 APECO1_RS21375 a2ea77af70193144cfef5c74f92f70d7 622 Pfam PF02705 K+ potassium transporter 14 544 9.8E-206 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 APECO1_RS21375 a2ea77af70193144cfef5c74f92f70d7 622 TIGRFAM TIGR00794 kup: potassium uptake protein 97 550 8.0E-202 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 APECO1_RS21375 a2ea77af70193144cfef5c74f92f70d7 622 PANTHER PTHR30540 16 622 3.3E-281 T 22-04-2016 APECO1_RS22990 e4386405623630cb92b2727b635c689f 212 Gene3D G3DSA:2.40.360.10 16 211 5.0E-81 T 22-04-2016 IPR023373 YmcC-like domain APECO1_RS22990 e4386405623630cb92b2727b635c689f 212 SUPERFAMILY SSF159270 20 208 1.18E-56 T 22-04-2016 IPR023373 YmcC-like domain APECO1_RS22990 e4386405623630cb92b2727b635c689f 212 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 206 1.2E-61 T 22-04-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB APECO1_RS22735 bb3e0d7cf8c73e995b255695bc36b470 165 PANTHER PTHR11560 1 165 1.3E-61 T 22-04-2016 APECO1_RS22735 bb3e0d7cf8c73e995b255695bc36b470 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.856 T 22-04-2016 IPR022973 Ribosomal protein L10 APECO1_RS22735 bb3e0d7cf8c73e995b255695bc36b470 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22735 bb3e0d7cf8c73e995b255695bc36b470 165 Pfam PF00466 Ribosomal protein L10 5 101 6.2E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APECO1_RS22735 bb3e0d7cf8c73e995b255695bc36b470 165 SUPERFAMILY SSF160369 4 160 2.48E-48 T 22-04-2016 APECO1_RS22735 bb3e0d7cf8c73e995b255695bc36b470 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 22-04-2016 APECO1_RS00675 771216469561b72a00428adf3476bd23 516 Pfam PF00394 Multicopper oxidase 203 292 9.5E-6 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 APECO1_RS00675 771216469561b72a00428adf3476bd23 516 Pfam PF07731 Multicopper oxidase 399 516 5.0E-24 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 APECO1_RS00675 771216469561b72a00428adf3476bd23 516 Gene3D G3DSA:2.60.40.420 33 170 3.7E-34 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS00675 771216469561b72a00428adf3476bd23 516 PANTHER PTHR11709:SF2 56 516 8.0E-125 T 22-04-2016 APECO1_RS00675 771216469561b72a00428adf3476bd23 516 Gene3D G3DSA:2.60.40.420 352 516 4.3E-31 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS00675 771216469561b72a00428adf3476bd23 516 SUPERFAMILY SSF49503 172 288 7.32E-33 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS00675 771216469561b72a00428adf3476bd23 516 SUPERFAMILY SSF49503 374 394 7.32E-33 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS00675 771216469561b72a00428adf3476bd23 516 SUPERFAMILY SSF49503 348 516 1.93E-31 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS00675 771216469561b72a00428adf3476bd23 516 ProSitePatterns PS00080 Multicopper oxidases signature 2. 499 510 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 APECO1_RS00675 771216469561b72a00428adf3476bd23 516 Gene3D G3DSA:2.60.40.420 171 320 2.8E-31 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS00675 771216469561b72a00428adf3476bd23 516 SUPERFAMILY SSF49503 32 167 1.56E-31 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS00675 771216469561b72a00428adf3476bd23 516 Pfam PF07732 Multicopper oxidase 55 165 2.7E-31 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 APECO1_RS00675 771216469561b72a00428adf3476bd23 516 PANTHER PTHR11709 56 516 8.0E-125 T 22-04-2016 APECO1_RS02875 41510b6be82a7e4e218d3c47d7f54e77 416 Gene3D G3DSA:1.20.1250.20 239 403 8.0E-13 T 22-04-2016 APECO1_RS02875 41510b6be82a7e4e218d3c47d7f54e77 416 Pfam PF05977 Transmembrane secretion effector 16 405 4.2E-21 T 22-04-2016 IPR010290 Transmembrane secretion effector APECO1_RS02875 41510b6be82a7e4e218d3c47d7f54e77 416 Gene3D G3DSA:1.20.1250.20 16 206 4.1E-22 T 22-04-2016 APECO1_RS02875 41510b6be82a7e4e218d3c47d7f54e77 416 PANTHER PTHR23513 1 410 3.7E-140 T 22-04-2016 APECO1_RS02875 41510b6be82a7e4e218d3c47d7f54e77 416 SUPERFAMILY SSF103473 16 403 9.94E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS02875 41510b6be82a7e4e218d3c47d7f54e77 416 Hamap MF_01436 Enterobactin exporter EntS [entS]. 1 414 43.539 T 22-04-2016 IPR023722 Enterobactin exporter, EntS GO:0005886|GO:0042930|GO:0042931 APECO1_RS02875 41510b6be82a7e4e218d3c47d7f54e77 416 PANTHER PTHR23513:SF9 1 410 3.7E-140 T 22-04-2016 APECO1_RS21955 d1bf2e3b27b777555481e04e5c262d58 260 Hamap MF_00901 Tat-linked quality control protein TatD [tatD]. 1 259 65.835 T 22-04-2016 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 APECO1_RS21955 d1bf2e3b27b777555481e04e5c262d58 260 PIRSF PIRSF005902 1 260 1.1E-76 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS21955 d1bf2e3b27b777555481e04e5c262d58 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APECO1_RS21955 d1bf2e3b27b777555481e04e5c262d58 260 PANTHER PTHR10060:SF13 1 260 7.0E-171 T 22-04-2016 APECO1_RS21955 d1bf2e3b27b777555481e04e5c262d58 260 Pfam PF01026 TatD related DNase 2 256 5.4E-70 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS21955 d1bf2e3b27b777555481e04e5c262d58 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APECO1_RS21955 d1bf2e3b27b777555481e04e5c262d58 260 Gene3D G3DSA:3.20.20.140 1 258 4.3E-87 T 22-04-2016 APECO1_RS21955 d1bf2e3b27b777555481e04e5c262d58 260 SUPERFAMILY SSF51556 1 258 9.4E-86 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS21955 d1bf2e3b27b777555481e04e5c262d58 260 PANTHER PTHR10060 1 260 7.0E-171 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS13700 75ddc9a0da2345f1dbea98d2c8ab1b29 166 Gene3D G3DSA:1.10.10.10 108 165 2.5E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS13700 75ddc9a0da2345f1dbea98d2c8ab1b29 166 Pfam PF00936 BMC domain 4 79 2.0E-21 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13700 75ddc9a0da2345f1dbea98d2c8ab1b29 166 SUPERFAMILY SSF143414 3 92 1.01E-23 T 22-04-2016 APECO1_RS13700 75ddc9a0da2345f1dbea98d2c8ab1b29 166 Pfam PF16365 Ethanolamine utilization protein EutK C-terminus 109 162 3.8E-35 T 22-04-2016 IPR032298 Ethanolamine utilization protein EutK, C-terminal UniPathway: UPA00560 APECO1_RS13700 75ddc9a0da2345f1dbea98d2c8ab1b29 166 PANTHER PTHR33941 1 162 3.3E-55 T 22-04-2016 APECO1_RS13700 75ddc9a0da2345f1dbea98d2c8ab1b29 166 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 22-04-2016 IPR020808 Bacterial microcompartments protein, conserved site APECO1_RS13700 75ddc9a0da2345f1dbea98d2c8ab1b29 166 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 47 5.0E-9 T 22-04-2016 APECO1_RS13700 75ddc9a0da2345f1dbea98d2c8ab1b29 166 SMART SM00877 3 79 1.4E-26 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13700 75ddc9a0da2345f1dbea98d2c8ab1b29 166 PANTHER PTHR33941:SF3 1 162 3.3E-55 T 22-04-2016 APECO1_RS03625 859379a94b8c6957497f8125302bcc1e 313 Gene3D G3DSA:3.30.70.1350 227 290 5.5E-4 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APECO1_RS03625 859379a94b8c6957497f8125302bcc1e 313 SUPERFAMILY SSF161111 16 214 1.07E-60 T 22-04-2016 APECO1_RS03625 859379a94b8c6957497f8125302bcc1e 313 PANTHER PTHR11562 3 301 9.5E-120 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APECO1_RS03625 859379a94b8c6957497f8125302bcc1e 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 293 4.0E-102 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APECO1_RS03625 859379a94b8c6957497f8125302bcc1e 313 SUPERFAMILY SSF160240 227 292 8.5E-10 T 22-04-2016 APECO1_RS03625 859379a94b8c6957497f8125302bcc1e 313 Gene3D G3DSA:1.20.1510.10 18 213 2.3E-67 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain APECO1_RS03625 859379a94b8c6957497f8125302bcc1e 313 Pfam PF01545 Cation efflux family 22 213 6.4E-52 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APECO1_RS03625 859379a94b8c6957497f8125302bcc1e 313 PANTHER PTHR11562:SF17 3 301 9.5E-120 T 22-04-2016 APECO1_RS03625 859379a94b8c6957497f8125302bcc1e 313 Hamap MF_00552 Zinc transporter ZitB [zitB]. 3 312 66.76 T 22-04-2016 IPR023500 Zinc transporter ZitB GO:0005385|GO:0006829|GO:0016020 APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 564 40.715 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 Gene3D G3DSA:2.60.40.1250 24 142 1.0E-47 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 ProSitePatterns PS00194 Thioredoxin family active site. 472 490 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 Pfam PF11412 Disulphide bond corrector protein DsbC 28 138 9.4E-36 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 Pfam PF13899 Thioredoxin-like 462 536 1.5E-12 T 22-04-2016 APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 SUPERFAMILY SSF74863 27 141 6.15E-42 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 171 376 1.5E-18 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 SUPERFAMILY SSF52833 444 561 6.77E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 Gene3D G3DSA:3.40.30.10 452 561 1.0E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 PANTHER PTHR32234 1 564 7.2E-252 T 22-04-2016 APECO1_RS24075 020e569b7a7f63183ac5ee0599ee5399 565 PANTHER PTHR32234:SF0 1 564 7.2E-252 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 PANTHER PTHR30050 1 224 5.7E-119 T 22-04-2016 APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 35 55 1.5E-7 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 123 150 1.5E-7 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 1 225 55.593 T 22-04-2016 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 1 224 7.1E-83 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 Gene3D G3DSA:1.10.8.60 159 224 5.5E-31 T 22-04-2016 APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 PANTHER PTHR30050:SF5 1 224 5.7E-119 T 22-04-2016 APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 SUPERFAMILY SSF52540 10 203 5.58E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 Pfam PF00308 Bacterial dnaA protein 8 204 1.1E-16 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APECO1_RS13900 63727e825b5c302220c114748aa0a08d 225 Gene3D G3DSA:3.40.50.300 2 156 3.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19200 91f93bb983f053978240c3ebb5f29112 128 Gene3D G3DSA:3.40.1260.10 1 128 4.8E-31 T 22-04-2016 IPR027396 DsrEFH-like APECO1_RS19200 91f93bb983f053978240c3ebb5f29112 128 Pfam PF02635 DsrE/DsrF-like family 1 128 4.1E-29 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APECO1_RS19200 91f93bb983f053978240c3ebb5f29112 128 SUPERFAMILY SSF75169 1 128 1.06E-38 T 22-04-2016 IPR027396 DsrEFH-like APECO1_RS19200 91f93bb983f053978240c3ebb5f29112 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 6.5E-55 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 APECO1_RS19200 91f93bb983f053978240c3ebb5f29112 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 41.151 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 APECO1_RS19200 91f93bb983f053978240c3ebb5f29112 128 PANTHER PTHR34874 1 128 1.3E-66 T 22-04-2016 APECO1_RS19200 91f93bb983f053978240c3ebb5f29112 128 PANTHER PTHR34874:SF1 1 128 1.3E-66 T 22-04-2016 APECO1_RS23210 c189e8ebe62acb28884ad96e737e0523 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APECO1_RS23210 c189e8ebe62acb28884ad96e737e0523 138 SUPERFAMILY SSF111038 1 138 9.29E-47 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APECO1_RS23210 c189e8ebe62acb28884ad96e737e0523 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 1.5E-35 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APECO1_RS23210 c189e8ebe62acb28884ad96e737e0523 138 PIRSF PIRSF004681 1 138 6.1E-43 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APECO1_RS23210 c189e8ebe62acb28884ad96e737e0523 138 PANTHER PTHR30615 1 138 2.7E-73 T 22-04-2016 APECO1_RS23210 c189e8ebe62acb28884ad96e737e0523 138 Gene3D G3DSA:2.60.120.460 1 138 3.9E-55 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APECO1_RS23210 c189e8ebe62acb28884ad96e737e0523 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 138 3.7E-54 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APECO1_RS22935 656b467cd540f5345ae547209c91a8d2 274 PANTHER PTHR32502:SF9 1 274 7.2E-134 T 22-04-2016 APECO1_RS22935 656b467cd540f5345ae547209c91a8d2 274 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 5 273 1.8E-142 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 APECO1_RS22935 656b467cd540f5345ae547209c91a8d2 274 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 273 1.0E-104 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APECO1_RS22935 656b467cd540f5345ae547209c91a8d2 274 PANTHER PTHR32502 1 274 7.2E-134 T 22-04-2016 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 SUPERFAMILY SSF53901 1 259 1.92E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 Gene3D G3DSA:3.40.47.10 184 267 1.9E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 Gene3D G3DSA:3.40.47.10 4 126 1.9E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 2.5E-49 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 SUPERFAMILY SSF53901 262 386 1.5E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 Gene3D G3DSA:3.40.47.10 268 386 5.5E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 Gene3D G3DSA:3.40.47.10 143 183 5.5E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 3.0E-87 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.4E-242 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 PIRSF PIRSF000429 1 387 7.8E-132 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.3E-145 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 PANTHER PTHR18919:SF69 1 387 2.4E-205 T 22-04-2016 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 62.344 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APECO1_RS21980 05131b15357becb9c88ea54edd33ef4c 387 PANTHER PTHR18919 1 387 2.4E-205 T 22-04-2016 APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 353 3.1E-177 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Gene3D G3DSA:3.90.25.10 206 247 1.1E-52 T 22-04-2016 APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Gene3D G3DSA:3.90.25.10 304 363 1.1E-52 T 22-04-2016 APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 346 9.9E-162 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Gene3D G3DSA:3.40.50.720 4 205 8.6E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 356 56.612 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 PANTHER PTHR10366:SF32 4 282 1.7E-218 T 22-04-2016 APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 PANTHER PTHR10366:SF32 310 373 1.7E-218 T 22-04-2016 APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 SUPERFAMILY SSF51735 2 353 4.28E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 PANTHER PTHR10366 4 282 1.7E-218 T 22-04-2016 APECO1_RS11390 d6a0ba6bed90c6f7d54a08c3fbbcd213 373 PANTHER PTHR10366 310 373 1.7E-218 T 22-04-2016 APECO1_RS00520 bf027aecde1ae723b927b94a26fa4936 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 49.147 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APECO1_RS00520 bf027aecde1ae723b927b94a26fa4936 305 PANTHER PTHR33694 1 305 3.8E-148 T 22-04-2016 APECO1_RS00520 bf027aecde1ae723b927b94a26fa4936 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 2.6E-164 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APECO1_RS00520 bf027aecde1ae723b927b94a26fa4936 305 SUPERFAMILY SSF54211 134 278 3.34E-54 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS00520 bf027aecde1ae723b927b94a26fa4936 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 8.1E-109 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APECO1_RS00520 bf027aecde1ae723b927b94a26fa4936 305 Gene3D G3DSA:3.30.230.20 3 124 1.7E-45 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APECO1_RS00520 bf027aecde1ae723b927b94a26fa4936 305 Gene3D G3DSA:3.30.1700.10 129 283 3.0E-63 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APECO1_RS00520 bf027aecde1ae723b927b94a26fa4936 305 SUPERFAMILY SSF54211 3 124 1.29E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS00520 bf027aecde1ae723b927b94a26fa4936 305 PANTHER PTHR33694:SF1 1 305 3.8E-148 T 22-04-2016 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 607 56.042 T 22-04-2016 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 2.4E-61 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 PANTHER PTHR16254 1 556 0.0 T 22-04-2016 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 Gene3D G3DSA:3.40.50.720 395 530 2.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 SUPERFAMILY SSF51735 401 530 1.05E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 Pfam PF02254 TrkA-N domain 402 512 3.5E-26 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 2.0E-8 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 2.0E-8 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 2.0E-8 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 2.0E-8 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 PANTHER PTHR16254:SF28 1 556 0.0 T 22-04-2016 APECO1_RS00265 b11fd5062f7a49c5f6bd036604830f9b 620 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 2.4E-93 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 Gene3D G3DSA:3.90.226.10 335 533 8.8E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 Gene3D G3DSA:3.90.226.10 646 675 8.8E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 SMART SM00245 326 531 5.2E-82 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 SUPERFAMILY SSF52096 194 264 1.51E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 SUPERFAMILY SSF52096 350 537 1.51E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 SUPERFAMILY SSF50156 219 345 6.03E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 Gene3D G3DSA:3.30.750.44 199 251 7.3E-4 T 22-04-2016 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 Pfam PF03572 Peptidase family S41 356 529 1.8E-53 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 SMART SM00228 246 323 1.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 Gene3D G3DSA:2.30.42.10 252 334 6.2E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 PANTHER PTHR32060:SF11 1 604 0.0 T 22-04-2016 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 536 667 1.1E-39 T 22-04-2016 IPR020992 Tail specific protease, C-terminal APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 PANTHER PTHR32060 1 604 0.0 T 22-04-2016 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 6.2E-131 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APECO1_RS09800 66db6ecf2573042bea3fcddc42f40c03 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 6.0E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00065 052f9b9bbc7cdbd64f60bf0e732b9d84 237 Pfam PF03981 Ubiquinol-cytochrome C chaperone 59 220 3.7E-23 T 22-04-2016 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 APECO1_RS00065 052f9b9bbc7cdbd64f60bf0e732b9d84 237 Pfam PF13099 Domain of unknown function (DUF3944) 5 39 3.7E-15 T 22-04-2016 IPR025217 Domain of unknown function DUF3944 APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 Gene3D G3DSA:3.40.50.1820 172 302 2.5E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 Gene3D G3DSA:3.40.50.1820 351 474 2.5E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 Gene3D G3DSA:3.40.50.1820 50 138 2.5E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 Pfam PF00561 alpha/beta hydrolase fold 89 461 6.6E-52 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 PANTHER PTHR10992 363 476 2.6E-33 T 22-04-2016 APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 PANTHER PTHR10992 174 263 2.6E-33 T 22-04-2016 APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 PANTHER PTHR10992 20 137 2.6E-33 T 22-04-2016 APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 PANTHER PTHR10992:SF878 363 476 2.6E-33 T 22-04-2016 APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 PANTHER PTHR10992:SF878 174 263 2.6E-33 T 22-04-2016 APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 PANTHER PTHR10992:SF878 20 137 2.6E-33 T 22-04-2016 APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 SUPERFAMILY SSF53474 85 139 2.51E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 SUPERFAMILY SSF53474 373 460 2.51E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07755 16b5e6ce091b99064d95b14405d84dec 494 SUPERFAMILY SSF53474 174 228 2.51E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS16730 8aaa1ae42d0eef8631f3e60598bb4e9d 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 4 91 3.4E-35 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 APECO1_RS16730 8aaa1ae42d0eef8631f3e60598bb4e9d 96 PANTHER PTHR13420 6 94 1.0E-28 T 22-04-2016 APECO1_RS16730 8aaa1ae42d0eef8631f3e60598bb4e9d 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 4.7E-25 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APECO1_RS16730 8aaa1ae42d0eef8631f3e60598bb4e9d 96 Gene3D G3DSA:3.30.1200.10 2 91 1.2E-30 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APECO1_RS16730 8aaa1ae42d0eef8631f3e60598bb4e9d 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.455 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APECO1_RS16730 8aaa1ae42d0eef8631f3e60598bb4e9d 96 SMART SM01152 7 83 2.3E-37 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APECO1_RS16730 8aaa1ae42d0eef8631f3e60598bb4e9d 96 SUPERFAMILY SSF69786 2 95 1.44E-32 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APECO1_RS24600 6bd08da5ebf2b3c07a5c4470b7e04317 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 3.8E-54 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS24600 6bd08da5ebf2b3c07a5c4470b7e04317 450 SUPERFAMILY SSF111283 17 449 4.32E-133 T 22-04-2016 APECO1_RS24600 6bd08da5ebf2b3c07a5c4470b7e04317 450 PANTHER PTHR30624:SF1 6 450 7.1E-197 T 22-04-2016 APECO1_RS24600 6bd08da5ebf2b3c07a5c4470b7e04317 450 PANTHER PTHR30624 6 450 7.1E-197 T 22-04-2016 APECO1_RS03130 e167a6497b4d458777556cab6fbc71c0 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 22-04-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 APECO1_RS03130 e167a6497b4d458777556cab6fbc71c0 311 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 82.607 T 22-04-2016 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 APECO1_RS03130 e167a6497b4d458777556cab6fbc71c0 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 300 2.7E-78 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APECO1_RS03130 e167a6497b4d458777556cab6fbc71c0 311 PANTHER PTHR12304 1 310 1.5E-198 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase APECO1_RS03130 e167a6497b4d458777556cab6fbc71c0 311 SUPERFAMILY SSF53590 4 308 2.88E-108 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APECO1_RS03130 e167a6497b4d458777556cab6fbc71c0 311 Gene3D G3DSA:3.90.245.10 4 308 2.6E-116 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APECO1_RS03130 e167a6497b4d458777556cab6fbc71c0 311 PANTHER PTHR12304:SF19 1 310 1.5E-198 T 22-04-2016 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 Gene3D G3DSA:3.40.50.10380 17 268 1.0E-116 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PANTHER PTHR23406:SF25 8 565 0.0 T 22-04-2016 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 SUPERFAMILY SSF53223 7 270 2.88E-110 T 22-04-2016 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PANTHER PTHR23406 8 565 0.0 T 22-04-2016 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 SMART SM01274 81 261 5.2E-108 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 Gene3D G3DSA:3.40.50.720 269 562 1.3E-108 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 5.8E-104 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PIRSF PIRSF000106 1 563 1.0E-226 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 SMART SM00919 271 531 3.0E-130 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 SUPERFAMILY SSF51735 271 562 5.03E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 408 424 3.1E-74 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 183 205 3.1E-74 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 267 283 3.1E-74 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 242 260 3.1E-74 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 298 314 3.1E-74 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 87 111 3.1E-74 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 PRINTS PR00072 Malic enzyme signature 147 176 3.1E-74 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 72.724 T 22-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 APECO1_RS08190 03df312d10c6d3d3b40c9b5d3442532a 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 4.6E-80 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APECO1_RS25085 e4883ecf868b5d7d9f5e0656a6c8d1bb 716 Pfam PF02554 Carbon starvation protein CstA 34 405 1.6E-162 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 APECO1_RS25085 e4883ecf868b5d7d9f5e0656a6c8d1bb 716 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 487 614 1.2E-34 T 22-04-2016 IPR025299 CstA, C-terminal domain APECO1_RS25085 e4883ecf868b5d7d9f5e0656a6c8d1bb 716 PANTHER PTHR30252:SF3 429 715 0.0 T 22-04-2016 APECO1_RS25085 e4883ecf868b5d7d9f5e0656a6c8d1bb 716 PANTHER PTHR30252:SF3 8 403 0.0 T 22-04-2016 APECO1_RS25085 e4883ecf868b5d7d9f5e0656a6c8d1bb 716 PANTHER PTHR30252 429 715 0.0 T 22-04-2016 APECO1_RS25085 e4883ecf868b5d7d9f5e0656a6c8d1bb 716 PANTHER PTHR30252 8 403 0.0 T 22-04-2016 APECO1_RS17820 b9f58c8e73f48c10bddd1dac4690d710 201 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 176 2.1E-77 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS17820 b9f58c8e73f48c10bddd1dac4690d710 201 SUPERFAMILY SSF117457 3 174 1.57E-57 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS17820 b9f58c8e73f48c10bddd1dac4690d710 201 Pfam PF05683 Fumarase C-terminus 9 175 7.5E-40 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS17820 b9f58c8e73f48c10bddd1dac4690d710 201 Gene3D G3DSA:3.20.130.10 1 174 7.1E-68 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS17820 b9f58c8e73f48c10bddd1dac4690d710 201 PANTHER PTHR30389 1 197 4.8E-106 T 22-04-2016 APECO1_RS13470 adc094a4c3e74979cd3f427bcde1f6e3 108 Pfam PF10697 Protein of unknown function (DUF2502) 23 106 2.1E-19 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 SUPERFAMILY SSF51905 2 335 2.75E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PANTHER PTHR22912:SF93 1 461 6.6E-300 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PIRSF PIRSF000350 2 463 6.6E-70 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 3.4E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 70.383 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.4E-25 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 9.4E-25 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 9.4E-25 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 9.4E-25 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 9.4E-25 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PANTHER PTHR22912 1 461 6.6E-300 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-49 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.1E-49 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.1E-49 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.1E-49 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.1E-49 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.1E-49 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.1E-49 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.1E-49 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-49 T 22-04-2016 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 Gene3D G3DSA:3.50.50.60 157 278 1.7E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 Gene3D G3DSA:3.50.50.60 279 338 4.6E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 Gene3D G3DSA:3.50.50.60 5 150 4.6E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 Gene3D G3DSA:3.30.390.30 345 460 2.7E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 SUPERFAMILY SSF55424 345 463 1.05E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APECO1_RS22610 b41e72a4c433caa23623d4acc83b24c6 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 1.7E-30 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 Gene3D G3DSA:3.40.630.30 1 150 2.7E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 Gene3D G3DSA:3.40.630.30 218 246 2.7E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 PANTHER PTHR30420 1 344 1.5E-218 T 22-04-2016 APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 SUPERFAMILY SSF55729 1 337 1.19E-133 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 3.4E-154 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 PANTHER PTHR30420:SF1 1 344 1.5E-218 T 22-04-2016 APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 3.2E-167 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 Gene3D G3DSA:2.40.40.20 273 337 1.1E-11 T 22-04-2016 APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 6.4E-145 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 APECO1_RS09365 4af1fbaea72b0fc0fcae89c0324839ed 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 344 70.232 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 Gene3D G3DSA:3.40.50.180 155 341 5.1E-84 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.342 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 Gene3D G3DSA:3.40.50.2300 2 108 6.4E-28 T 22-04-2016 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 PIRSF PIRSF000876 1 346 4.0E-137 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 SUPERFAMILY SSF52172 1 108 1.01E-27 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 PANTHER PTHR24421:SF21 3 349 7.7E-190 T 22-04-2016 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 Pfam PF01339 CheB methylesterase 159 336 4.7E-62 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 SUPERFAMILY SSF52738 156 342 8.11E-75 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 PANTHER PTHR24421 3 349 7.7E-190 T 22-04-2016 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 SMART SM00448 4 119 8.4E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS10075 1a6e39963e5e7e46f1554824f380d51b 349 Pfam PF00072 Response regulator receiver domain 6 109 8.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 SUPERFAMILY SSF46785 20 90 2.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 SUPERFAMILY SSF64288 75 246 4.71E-40 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 SMART SM00866 107 243 3.7E-32 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 SMART SM00345 28 87 2.0E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 Gene3D G3DSA:1.10.10.10 20 89 4.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 Gene3D G3DSA:3.40.1410.10 93 247 2.9E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 7.4E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 7.4E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 PANTHER PTHR11751 136 159 1.3E-66 T 22-04-2016 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 PANTHER PTHR11751 14 90 1.3E-66 T 22-04-2016 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 87 3.9E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 PANTHER PTHR11751:SF433 136 159 1.3E-66 T 22-04-2016 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 PANTHER PTHR11751:SF433 14 90 1.3E-66 T 22-04-2016 APECO1_RS11765 838b91d3f84d1cd9121d53f4d0603124 248 Pfam PF07702 UTRA domain 108 242 2.1E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APECO1_RS23505 89e6a33bb17ca12968afd5ab0ed2aa25 262 SUPERFAMILY SSF52540 3 240 6.56E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23505 89e6a33bb17ca12968afd5ab0ed2aa25 262 Gene3D G3DSA:3.40.50.300 3 242 7.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23505 89e6a33bb17ca12968afd5ab0ed2aa25 262 PANTHER PTHR24220:SF408 6 258 2.6E-128 T 22-04-2016 APECO1_RS23505 89e6a33bb17ca12968afd5ab0ed2aa25 262 Pfam PF00005 ABC transporter 20 181 5.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23505 89e6a33bb17ca12968afd5ab0ed2aa25 262 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS23505 89e6a33bb17ca12968afd5ab0ed2aa25 262 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 9.6E-105 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 APECO1_RS23505 89e6a33bb17ca12968afd5ab0ed2aa25 262 SMART SM00382 29 229 6.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23505 89e6a33bb17ca12968afd5ab0ed2aa25 262 PANTHER PTHR24220 6 258 2.6E-128 T 22-04-2016 APECO1_RS08350 d2adf017c6c909cee81a2251ff10cd03 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 57.882 T 22-04-2016 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58|UniPathway: UPA00246 APECO1_RS08350 d2adf017c6c909cee81a2251ff10cd03 483 Gene3D G3DSA:3.40.50.720 3 263 2.1E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08350 d2adf017c6c909cee81a2251ff10cd03 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 2.1E-41 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APECO1_RS08350 d2adf017c6c909cee81a2251ff10cd03 483 Gene3D G3DSA:1.10.1040.10 272 482 4.6E-68 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS08350 d2adf017c6c909cee81a2251ff10cd03 483 PANTHER PTHR30524 2 483 0.0 T 22-04-2016 APECO1_RS08350 d2adf017c6c909cee81a2251ff10cd03 483 SUPERFAMILY SSF51735 2 264 2.87E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08350 d2adf017c6c909cee81a2251ff10cd03 483 SUPERFAMILY SSF48179 273 482 1.22E-52 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS08350 d2adf017c6c909cee81a2251ff10cd03 483 PANTHER PTHR30524:SF1 2 483 0.0 T 22-04-2016 APECO1_RS08350 d2adf017c6c909cee81a2251ff10cd03 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 458 4.6E-83 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 PANTHER PTHR30126 1 309 3.2E-179 T 22-04-2016 APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 SUPERFAMILY SSF46785 11 112 1.55E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 Gene3D G3DSA:1.10.10.10 2 81 1.3E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 Gene3D G3DSA:3.40.190.10 180 260 5.6E-22 T 22-04-2016 APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 Gene3D G3DSA:3.40.190.10 92 179 1.4E-21 T 22-04-2016 APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 SUPERFAMILY SSF53850 88 294 5.44E-42 T 22-04-2016 APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 Pfam PF03466 LysR substrate binding domain 90 293 4.1E-41 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 PANTHER PTHR30126:SF6 1 309 3.2E-179 T 22-04-2016 APECO1_RS10930 8fb25ba0663359ec9307108f3a23876c 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.5E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS08725 b2cdcea1d0c57fe6f0d34de0d283b551 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 2.7E-29 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APECO1_RS08725 b2cdcea1d0c57fe6f0d34de0d283b551 71 SUPERFAMILY SSF68989 1 71 1.12E-22 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APECO1_RS08725 b2cdcea1d0c57fe6f0d34de0d283b551 71 Gene3D G3DSA:1.20.1280.40 1 71 2.0E-32 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APECO1_RS20975 8b032239ad5938a63473bc049c05e56b 470 PANTHER PTHR11119:SF9 1 458 2.2E-174 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 APECO1_RS20975 8b032239ad5938a63473bc049c05e56b 470 PANTHER PTHR11119 1 458 2.2E-174 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS20975 8b032239ad5938a63473bc049c05e56b 470 Pfam PF00860 Permease family 58 431 3.0E-45 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS20975 8b032239ad5938a63473bc049c05e56b 470 PIRSF PIRSF005353 32 470 2.9E-170 T 22-04-2016 IPR026033 Purine permease PbuG-like APECO1_RS06205 48e12cecac761e9a37f181be663a4bfe 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.4E-37 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APECO1_RS06205 48e12cecac761e9a37f181be663a4bfe 88 PANTHER PTHR33404 1 88 4.4E-36 T 22-04-2016 APECO1_RS06205 48e12cecac761e9a37f181be663a4bfe 88 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 4.0E-25 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APECO1_RS06205 48e12cecac761e9a37f181be663a4bfe 88 Gene3D G3DSA:3.30.1070.10 31 85 6.0E-26 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APECO1_RS06205 48e12cecac761e9a37f181be663a4bfe 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.958 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APECO1_RS06205 48e12cecac761e9a37f181be663a4bfe 88 SUPERFAMILY SSF55229 32 85 1.22E-18 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APECO1_RS15730 37317898ee5f3d4a11031fd20b1e24fb 425 Gene3D G3DSA:1.20.1250.20 8 197 2.1E-21 T 22-04-2016 APECO1_RS15730 37317898ee5f3d4a11031fd20b1e24fb 425 Pfam PF07690 Major Facilitator Superfamily 26 333 2.5E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS15730 37317898ee5f3d4a11031fd20b1e24fb 425 SUPERFAMILY SSF103473 5 413 2.75E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS15730 37317898ee5f3d4a11031fd20b1e24fb 425 Gene3D G3DSA:1.20.1250.20 215 408 1.0E-7 T 22-04-2016 APECO1_RS13405 fe4e20ee47f73d31800c8744c918c2c8 80 Pfam PF10810 Protein of unknown function (DUF2545) 1 80 3.2E-45 T 22-04-2016 IPR024470 Protein of unknown function DUF2545 APECO1_RS13405 fe4e20ee47f73d31800c8744c918c2c8 80 ProDom PD857460 MEMBRANE YFDY INNER TRANSMEMBRANE STY2638 ECS3257 1 80 2.0E-38 T 22-04-2016 IPR024470 Protein of unknown function DUF2545 APECO1_RS01810 9052f38e1949250399a424be67d2f821 427 PANTHER PTHR32027 7 427 1.9E-188 T 22-04-2016 APECO1_RS01810 9052f38e1949250399a424be67d2f821 427 SUPERFAMILY SSF51556 57 376 3.72E-109 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS01810 9052f38e1949250399a424be67d2f821 427 Pfam PF07969 Amidohydrolase family 48 405 4.6E-57 T 22-04-2016 IPR013108 Amidohydrolase 3 APECO1_RS01810 9052f38e1949250399a424be67d2f821 427 Gene3D G3DSA:2.30.40.10 22 65 3.9E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS01810 9052f38e1949250399a424be67d2f821 427 Gene3D G3DSA:3.20.20.140 66 367 4.9E-127 T 22-04-2016 APECO1_RS01810 9052f38e1949250399a424be67d2f821 427 PANTHER PTHR32027:SF0 7 427 1.9E-188 T 22-04-2016 APECO1_RS01810 9052f38e1949250399a424be67d2f821 427 SUPERFAMILY SSF51338 6 65 1.45E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS19515 55ce248322ee3d54f4b87772d710869d 297 Pfam PF04754 Putative transposase, YhgA-like 8 209 4.4E-87 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like APECO1_RS19515 55ce248322ee3d54f4b87772d710869d 297 PANTHER PTHR34611 2 297 5.6E-181 T 22-04-2016 APECO1_RS19515 55ce248322ee3d54f4b87772d710869d 297 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 294 4.1E-51 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 APECO1_RS19515 55ce248322ee3d54f4b87772d710869d 297 PANTHER PTHR34611:SF3 2 297 5.6E-181 T 22-04-2016 APECO1_RS22815 a4f3e32edffa7958dc01944ed07694eb 231 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 6 33 9.8E-9 T 22-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site APECO1_RS22815 a4f3e32edffa7958dc01944ed07694eb 231 PIRSF PIRSF006993 1 231 3.1E-117 T 22-04-2016 IPR016500 Uncharacterised conserved protein UCP006993 APECO1_RS22815 a4f3e32edffa7958dc01944ed07694eb 231 Pfam PF07356 Protein of unknown function (DUF1481) 42 227 5.8E-69 T 22-04-2016 IPR010858 Protein of unknown function DUF1481 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 SUPERFAMILY SSF48452 95 226 6.26E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 SUPERFAMILY SSF48452 269 383 6.26E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 Gene3D G3DSA:1.25.40.10 265 296 1.8E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 Gene3D G3DSA:1.25.40.10 328 383 1.8E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 Gene3D G3DSA:1.25.40.10 83 203 1.8E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 Pfam PF07219 HemY protein N-terminus 26 132 6.3E-36 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 Pfam PF07719 Tetratricopeptide repeat 329 360 1.7E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 PANTHER PTHR23083:SF396 83 385 9.5E-57 T 22-04-2016 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 4.3E-118 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 APECO1_RS21640 149fb7a87508140bd49dfb75a2489068 398 PANTHER PTHR23083 83 385 9.5E-57 T 22-04-2016 APECO1_RS17530 05178664e14e9913477b76976842575a 327 PIRSF PIRSF006470 1 324 1.2E-84 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APECO1_RS17530 05178664e14e9913477b76976842575a 327 PANTHER PTHR33376:SF6 5 327 3.7E-163 T 22-04-2016 APECO1_RS17530 05178664e14e9913477b76976842575a 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 270 9.2E-66 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APECO1_RS17530 05178664e14e9913477b76976842575a 327 PANTHER PTHR33376 5 327 3.7E-163 T 22-04-2016 APECO1_RS17530 05178664e14e9913477b76976842575a 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 312 7.1E-80 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 APECO1_RS08150 5f317e968407870bea65f524b90b30ef 274 PANTHER PTHR12715:SF7 1 273 1.0E-141 T 22-04-2016 APECO1_RS08150 5f317e968407870bea65f524b90b30ef 274 SUPERFAMILY SSF103481 172 272 5.23E-6 T 22-04-2016 APECO1_RS08150 5f317e968407870bea65f524b90b30ef 274 PANTHER PTHR12715 1 273 1.0E-141 T 22-04-2016 APECO1_RS08150 5f317e968407870bea65f524b90b30ef 274 SUPERFAMILY SSF103481 29 121 3.4E-7 T 22-04-2016 APECO1_RS08150 5f317e968407870bea65f524b90b30ef 274 Pfam PF00892 EamA-like transporter family 139 266 3.6E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS21700 3352e06eb266e4265ba948618ef8cc18 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 199 8.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS21700 3352e06eb266e4265ba948618ef8cc18 238 Gene3D G3DSA:3.40.50.1000 10 236 8.7E-29 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21700 3352e06eb266e4265ba948618ef8cc18 238 PANTHER PTHR12725:SF65 1 238 1.9E-84 T 22-04-2016 APECO1_RS21700 3352e06eb266e4265ba948618ef8cc18 238 PANTHER PTHR12725 1 238 1.9E-84 T 22-04-2016 APECO1_RS21700 3352e06eb266e4265ba948618ef8cc18 238 SUPERFAMILY SSF56784 10 238 2.1E-39 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS21700 3352e06eb266e4265ba948618ef8cc18 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 7.8E-14 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS11940 d4760f3e8c1fe650cab94db130d2a282 310 Gene3D G3DSA:3.40.710.10 18 277 1.6E-65 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS11940 d4760f3e8c1fe650cab94db130d2a282 310 SUPERFAMILY SSF56601 3 277 1.19E-61 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS11940 d4760f3e8c1fe650cab94db130d2a282 310 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 261 2.8E-89 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APECO1_RS11940 d4760f3e8c1fe650cab94db130d2a282 310 PANTHER PTHR21581:SF8 6 303 2.9E-195 T 22-04-2016 APECO1_RS11940 d4760f3e8c1fe650cab94db130d2a282 310 PANTHER PTHR21581 6 303 2.9E-195 T 22-04-2016 APECO1_RS11940 d4760f3e8c1fe650cab94db130d2a282 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 1.9E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS11940 d4760f3e8c1fe650cab94db130d2a282 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 1.9E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS11940 d4760f3e8c1fe650cab94db130d2a282 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 1.9E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 Gene3D G3DSA:1.10.1780.10 12 147 1.6E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 890 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 674 692 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 Gene3D G3DSA:1.10.8.60 815 896 1.0E-6 T 22-04-2016 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 PANTHER PTHR11638:SF11 552 919 0.0 T 22-04-2016 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 PANTHER PTHR11638:SF11 2 515 0.0 T 22-04-2016 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 SUPERFAMILY SSF52540 178 490 9.63E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 PANTHER PTHR11638 552 919 0.0 T 22-04-2016 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 PANTHER PTHR11638 2 515 0.0 T 22-04-2016 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 806 881 2.1E-8 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 Gene3D G3DSA:1.10.8.60 362 444 2.2E-28 T 22-04-2016 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 221 331 2.6E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 Gene3D G3DSA:3.40.50.300 612 814 6.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 SUPERFAMILY SSF81923 13 124 3.73E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 Pfam PF07724 AAA domain (Cdc48 subfamily) 639 800 1.3E-37 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 Gene3D G3DSA:3.40.50.300 179 358 2.7E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 3.0E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 3.0E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 751 765 3.0E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 718 736 3.0E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 SMART SM01086 806 898 1.7E-4 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 311 323 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 SMART SM00382 215 360 1.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 SMART SM00382 640 788 1.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS01170 298e17a90fb1c0ade5f27a2fcf591ffa 919 SUPERFAMILY SSF52540 589 882 5.85E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09590 a2e619a63adad3e55ca17d4d3b5d47bc 393 Pfam PF07690 Major Facilitator Superfamily 23 349 9.7E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS09590 a2e619a63adad3e55ca17d4d3b5d47bc 393 TIGRFAM TIGR00896 CynX: cyanate transporter 15 368 9.3E-150 T 22-04-2016 IPR004747 Cyanate transport system protein GO:0016021 APECO1_RS09590 a2e619a63adad3e55ca17d4d3b5d47bc 393 SUPERFAMILY SSF103473 7 389 4.71E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS09590 a2e619a63adad3e55ca17d4d3b5d47bc 393 Gene3D G3DSA:1.20.1250.20 14 192 1.8E-16 T 22-04-2016 APECO1_RS09590 a2e619a63adad3e55ca17d4d3b5d47bc 393 Gene3D G3DSA:1.20.1250.20 207 388 9.4E-14 T 22-04-2016 APECO1_RS09590 a2e619a63adad3e55ca17d4d3b5d47bc 393 PANTHER PTHR23523 1 393 2.6E-189 T 22-04-2016 APECO1_RS09590 a2e619a63adad3e55ca17d4d3b5d47bc 393 PANTHER PTHR23523:SF2 1 393 2.6E-189 T 22-04-2016 APECO1_RS21895 284a57a96fdd03e98f31a4cf130e6749 168 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 23 162 3.9E-21 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 APECO1_RS18610 8ef7436be78c48a9efc00128823b4243 655 PANTHER PTHR30509:SF10 7 255 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 APECO1_RS18610 8ef7436be78c48a9efc00128823b4243 655 PANTHER PTHR30509:SF10 305 638 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 APECO1_RS18610 8ef7436be78c48a9efc00128823b4243 655 Pfam PF04632 Fusaric acid resistance protein family 11 652 4.7E-166 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APECO1_RS18610 8ef7436be78c48a9efc00128823b4243 655 PANTHER PTHR30509 7 255 0.0 T 22-04-2016 APECO1_RS18610 8ef7436be78c48a9efc00128823b4243 655 PANTHER PTHR30509 305 638 0.0 T 22-04-2016 APECO1_RS18610 8ef7436be78c48a9efc00128823b4243 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 3 653 54.897 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 APECO1_RS08290 6fd45d9b97453a8576e0e5a13b9177ec 176 PANTHER PTHR33420 1 176 3.6E-56 T 22-04-2016 APECO1_RS08290 6fd45d9b97453a8576e0e5a13b9177ec 176 Gene3D G3DSA:2.60.40.1090 27 176 3.2E-39 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS08290 6fd45d9b97453a8576e0e5a13b9177ec 176 SUPERFAMILY SSF49401 33 176 1.19E-33 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS08290 6fd45d9b97453a8576e0e5a13b9177ec 176 Pfam PF00419 Fimbrial protein 29 176 2.2E-18 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS08290 6fd45d9b97453a8576e0e5a13b9177ec 176 PANTHER PTHR33420:SF1 1 176 3.6E-56 T 22-04-2016 APECO1_RS01995 2803dfeb0ae7ed649845703d52f5fbb8 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 1.2E-33 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 APECO1_RS01995 2803dfeb0ae7ed649845703d52f5fbb8 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 25.868 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 APECO1_RS01995 2803dfeb0ae7ed649845703d52f5fbb8 94 Gene3D G3DSA:2.60.120.10 1 94 1.5E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS01995 2803dfeb0ae7ed649845703d52f5fbb8 94 PANTHER PTHR36540:SF1 1 94 3.7E-49 T 22-04-2016 APECO1_RS01995 2803dfeb0ae7ed649845703d52f5fbb8 94 PANTHER PTHR36540 1 94 3.7E-49 T 22-04-2016 APECO1_RS01995 2803dfeb0ae7ed649845703d52f5fbb8 94 SUPERFAMILY SSF51182 1 94 6.85E-33 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS08265 04927034a8889e0282eb5ab3c9932ca0 253 PANTHER PTHR11019 138 239 4.0E-37 T 22-04-2016 APECO1_RS08265 04927034a8889e0282eb5ab3c9932ca0 253 SMART SM00342 150 231 1.8E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS08265 04927034a8889e0282eb5ab3c9932ca0 253 Pfam PF12833 Helix-turn-helix domain 157 230 1.1E-14 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS08265 04927034a8889e0282eb5ab3c9932ca0 253 PANTHER PTHR11019:SF46 138 239 4.0E-37 T 22-04-2016 APECO1_RS08265 04927034a8889e0282eb5ab3c9932ca0 253 Gene3D G3DSA:1.10.10.60 186 233 5.0E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS08265 04927034a8889e0282eb5ab3c9932ca0 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 231 9.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS08265 04927034a8889e0282eb5ab3c9932ca0 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 200 215 9.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS08265 04927034a8889e0282eb5ab3c9932ca0 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 186 227 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS08265 04927034a8889e0282eb5ab3c9932ca0 253 SUPERFAMILY SSF46689 186 235 1.52E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS03015 20f397a95735142ebb05825c6c566ddc 226 Pfam PF12431 Transcriptional regulator 135 160 1.7E-8 T 22-04-2016 IPR028141 Transcriptional regulator APECO1_RS03015 20f397a95735142ebb05825c6c566ddc 226 SMART SM00448 5 118 9.6E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS03015 20f397a95735142ebb05825c6c566ddc 226 PANTHER PTHR26402:SF550 5 212 1.6E-104 T 22-04-2016 APECO1_RS03015 20f397a95735142ebb05825c6c566ddc 226 Pfam PF00072 Response regulator receiver domain 8 117 2.6E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS03015 20f397a95735142ebb05825c6c566ddc 226 Gene3D G3DSA:3.40.50.2300 4 130 2.9E-23 T 22-04-2016 APECO1_RS03015 20f397a95735142ebb05825c6c566ddc 226 SUPERFAMILY SSF52172 4 179 4.7E-29 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS03015 20f397a95735142ebb05825c6c566ddc 226 PANTHER PTHR26402 5 212 1.6E-104 T 22-04-2016 APECO1_RS03015 20f397a95735142ebb05825c6c566ddc 226 PIRSF PIRSF006171 3 226 1.5E-77 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 2.2E-37 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SUPERFAMILY SSF100950 75 234 1.67E-23 T 22-04-2016 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Gene3D G3DSA:3.40.50.1360 76 215 2.8E-4 T 22-04-2016 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 2.3E-20 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Gene3D G3DSA:1.10.10.10 1 55 6.0E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SUPERFAMILY SSF46785 5 60 2.11E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 PANTHER PTHR30363:SF4 1 251 1.3E-113 T 22-04-2016 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SMART SM00420 6 58 4.8E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 PANTHER PTHR30363 1 251 1.3E-113 T 22-04-2016 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 SMART SM01134 74 232 3.4E-38 T 22-04-2016 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS24360 fa6722683dbb832b1c9f0e37fbd9c1a0 251 Hamap MF_01563 HTH-type transcriptional regulator UlaR [ulaR]. 1 251 71.049 T 22-04-2016 IPR023711 Transcription regulator HTH, UlaR GO:0005737|GO:0045892 APECO1_RS17150 31bc16330e4c91bb18532579d6acaaf5 409 Pfam PF07388 Alpha-2,8-polysialyltransferase (POLYST) 7 397 5.5E-162 T 22-04-2016 IPR010866 Alpha-2,8-polysialyltransferase APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 PANTHER PTHR11695 12 346 4.0E-127 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 Gene3D G3DSA:3.90.180.10 2 164 1.8E-45 T 22-04-2016 IPR011032 GroES-like APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 Pfam PF00107 Zinc-binding dehydrogenase 172 305 3.9E-20 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 SUPERFAMILY SSF51735 138 314 8.38E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 2.0E-28 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 SMART SM00829 6 344 0.0032 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 Gene3D G3DSA:3.40.50.720 165 286 4.5E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 SUPERFAMILY SSF50129 1 170 4.88E-44 T 22-04-2016 IPR011032 GroES-like APECO1_RS11715 2351003186da4d61acd75c1ccbe2f310 346 PANTHER PTHR11695:SF559 12 346 4.0E-127 T 22-04-2016 APECO1_RS09150 4ff96fba3c38492cef054a89021fa03e 348 PANTHER PTHR21225:SF6 1 348 5.1E-283 T 22-04-2016 APECO1_RS09150 4ff96fba3c38492cef054a89021fa03e 348 PIRSF PIRSF001361 1 348 2.0E-158 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS09150 4ff96fba3c38492cef054a89021fa03e 348 Pfam PF00793 DAHP synthetase I family 43 336 6.9E-110 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APECO1_RS09150 4ff96fba3c38492cef054a89021fa03e 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.5E-177 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS09150 4ff96fba3c38492cef054a89021fa03e 348 PANTHER PTHR21225 1 348 5.1E-283 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APECO1_RS09150 4ff96fba3c38492cef054a89021fa03e 348 Gene3D G3DSA:3.20.20.70 8 347 8.7E-147 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS09150 4ff96fba3c38492cef054a89021fa03e 348 SUPERFAMILY SSF51569 7 347 4.29E-132 T 22-04-2016 APECO1_RS01530 145fe1fc6253ca501f55920e425c5252 180 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 129 143 9.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS01530 145fe1fc6253ca501f55920e425c5252 180 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 159 9.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS01530 145fe1fc6253ca501f55920e425c5252 180 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 171 9.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS01530 145fe1fc6253ca501f55920e425c5252 180 Gene3D G3DSA:1.10.10.10 127 171 6.6E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01530 145fe1fc6253ca501f55920e425c5252 180 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 171 1.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS01530 145fe1fc6253ca501f55920e425c5252 180 SUPERFAMILY SSF46894 123 171 5.1E-12 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS01530 145fe1fc6253ca501f55920e425c5252 180 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 3 179 2.0E-9 T 22-04-2016 APECO1_RS01530 145fe1fc6253ca501f55920e425c5252 180 SMART SM00421 126 179 0.0012 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS16715 a858ec30ae66ac43eb42fe0127a90528 293 Pfam PF00437 Type II/IV secretion system protein 69 226 1.2E-41 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APECO1_RS16715 a858ec30ae66ac43eb42fe0127a90528 293 SMART SM00382 86 238 4.8E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS16715 a858ec30ae66ac43eb42fe0127a90528 293 PANTHER PTHR30486:SF6 5 293 4.0E-158 T 22-04-2016 APECO1_RS16715 a858ec30ae66ac43eb42fe0127a90528 293 SUPERFAMILY SSF52540 5 292 1.34E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16715 a858ec30ae66ac43eb42fe0127a90528 293 PANTHER PTHR30486 5 293 4.0E-158 T 22-04-2016 APECO1_RS16715 a858ec30ae66ac43eb42fe0127a90528 293 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 157 171 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APECO1_RS16715 a858ec30ae66ac43eb42fe0127a90528 293 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 293 2.1E-132 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 APECO1_RS16715 a858ec30ae66ac43eb42fe0127a90528 293 Gene3D G3DSA:3.40.50.300 64 292 8.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 SMART SM00411 1 91 1.6E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 PANTHER PTHR33175 1 93 1.2E-50 T 22-04-2016 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 Gene3D G3DSA:4.10.520.10 1 91 2.4E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 SUPERFAMILY SSF47729 1 91 6.92E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.437 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.3E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.3E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.3E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.6E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 PANTHER PTHR33175:SF5 1 93 1.2E-50 T 22-04-2016 APECO1_RS04670 2e51831bd5af44198685ea29ced2c512 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 6.3E-54 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 Pfam PF00591 Glycosyl transferase family, a/b domain 273 521 8.0E-102 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 Gene3D G3DSA:1.20.970.10 201 267 3.0E-27 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 SUPERFAMILY SSF47648 200 266 4.45E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.3E-12 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.3E-12 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.3E-12 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.2E-43 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 1.5E-54 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 SUPERFAMILY SSF52418 269 527 1.3E-91 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.697 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PANTHER PTHR11922 1 59 3.5E-198 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PANTHER PTHR11922 266 524 3.5E-198 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 Gene3D G3DSA:3.40.50.880 3 192 3.8E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 SUPERFAMILY SSF52317 3 191 1.38E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PANTHER PTHR11922:SF25 1 59 3.5E-198 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PANTHER PTHR11922:SF25 266 524 3.5E-198 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 5.4E-5 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 5.4E-5 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 528 8.3E-130 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 Gene3D G3DSA:3.40.1030.10 273 528 3.3E-97 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 262 1.5E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.4E-33 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 3.4E-33 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.4E-33 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 3.4E-33 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 3.4E-33 T 22-04-2016 APECO1_RS06990 39b0d1194b5e6af1e536eeea929319ce 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 3.4E-33 T 22-04-2016 APECO1_RS16840 0a5ecbb65541473f7db335ff17e054f1 336 ProDom PD484789 PAPG ADHESION ADHESIN FIMBRIAL PRECURSOR SIGNAL FIMBRIA PAPGII PRSG CELL 217 333 1.0E-63 T 22-04-2016 IPR005309 PapG, chaperone-binding APECO1_RS16840 0a5ecbb65541473f7db335ff17e054f1 336 Pfam PF03628 PapG chaperone-binding domain 228 336 3.2E-56 T 22-04-2016 IPR005309 PapG, chaperone-binding APECO1_RS16840 0a5ecbb65541473f7db335ff17e054f1 336 Pfam PF03627 PapG carbohydrate binding domain 1 226 2.1E-112 T 22-04-2016 IPR005310 PapG, carbohydrate-binding GO:0007155|GO:0030246 APECO1_RS16840 0a5ecbb65541473f7db335ff17e054f1 336 Gene3D G3DSA:2.60.40.1370 21 216 2.3E-103 T 22-04-2016 IPR005310 PapG, carbohydrate-binding GO:0007155|GO:0030246 APECO1_RS16840 0a5ecbb65541473f7db335ff17e054f1 336 SUPERFAMILY SSF49401 21 216 3.23E-94 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS20265 2e6477a5828faa4bb31e32492e007a94 63 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 63 6.0E-29 T 22-04-2016 IPR019995 Cellulose biosynthesis, BcsF/YhjT APECO1_RS20265 2e6477a5828faa4bb31e32492e007a94 63 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 2 63 1.0E-34 T 22-04-2016 IPR019995 Cellulose biosynthesis, BcsF/YhjT APECO1_RS20265 2e6477a5828faa4bb31e32492e007a94 63 Pfam PF11120 Cellulose biosynthesis protein BcsF 2 60 3.9E-30 T 22-04-2016 IPR019995 Cellulose biosynthesis, BcsF/YhjT APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 Gene3D G3DSA:3.40.50.300 275 526 2.3E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 Gene3D G3DSA:3.40.50.300 4 258 2.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 SMART SM00382 34 306 1.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 SMART SM00382 311 502 1.3E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 PANTHER PTHR24220 7 411 4.1E-218 T 22-04-2016 APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 PANTHER PTHR24220:SF574 7 411 4.1E-218 T 22-04-2016 APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 526 0.38 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 5.4E-5 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 Pfam PF00005 ABC transporter 26 184 8.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 Pfam PF00005 ABC transporter 302 454 2.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 SUPERFAMILY SSF52540 5 256 6.07E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 SUPERFAMILY SSF52540 276 525 6.91E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS12185 56ecd5cb70891ad47e667063fe587c2e 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 PANTHER PTHR24220 14 396 1.0E-279 T 22-04-2016 APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 SUPERFAMILY SSF52540 276 498 2.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 Gene3D G3DSA:3.40.50.300 268 500 1.7E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 Gene3D G3DSA:3.40.50.300 14 241 9.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 SMART SM00382 37 225 0.078 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 SMART SM00382 301 492 1.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 Pfam PF12698 ABC-2 family transporter protein 569 903 3.0E-38 T 22-04-2016 APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 Pfam PF00005 ABC transporter 293 436 6.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 Pfam PF00005 ABC transporter 28 175 2.4E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 PANTHER PTHR24220:SF388 14 396 1.0E-279 T 22-04-2016 APECO1_RS19980 9a4312351fb8e0d00ece7e7d1568a04b 911 SUPERFAMILY SSF52540 15 239 9.14E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09040 2b628c53358ddca66dd97eb7d30d29e9 122 PANTHER PTHR10072:SF47 15 122 5.9E-84 T 22-04-2016 APECO1_RS09040 2b628c53358ddca66dd97eb7d30d29e9 122 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 17 122 2.2E-51 T 22-04-2016 IPR011298 FeS assembly scaffold SufA GO:0016226 APECO1_RS09040 2b628c53358ddca66dd97eb7d30d29e9 122 SUPERFAMILY SSF89360 18 111 6.08E-27 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS09040 2b628c53358ddca66dd97eb7d30d29e9 122 PANTHER PTHR10072 15 122 5.9E-84 T 22-04-2016 APECO1_RS09040 2b628c53358ddca66dd97eb7d30d29e9 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 8.1E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS09040 2b628c53358ddca66dd97eb7d30d29e9 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 1.2E-32 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APECO1_RS09040 2b628c53358ddca66dd97eb7d30d29e9 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APECO1_RS09040 2b628c53358ddca66dd97eb7d30d29e9 122 Gene3D G3DSA:2.60.300.12 18 111 9.7E-29 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS01480 04078a7a4b3b79d77ebfeac1fdd8b632 71 Pfam PF03811 InsA N-terminal domain 1 35 1.4E-18 T 22-04-2016 IPR003220 InsA N-terminal domain GO:0006313 APECO1_RS01480 04078a7a4b3b79d77ebfeac1fdd8b632 71 Pfam PF12759 InsA C-terminal domain 42 65 1.8E-11 T 22-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 SUPERFAMILY SSF52096 321 440 7.69E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 SUPERFAMILY SSF52096 468 530 7.69E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 Gene3D G3DSA:3.90.226.10 220 316 2.5E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 Gene3D G3DSA:3.90.226.10 469 559 2.3E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 Gene3D G3DSA:3.90.226.10 30 177 2.5E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 Gene3D G3DSA:3.90.226.10 323 432 2.3E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 SUPERFAMILY SSF52096 30 181 3.54E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 SUPERFAMILY SSF52096 212 287 3.54E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 Pfam PF01343 Peptidase family S49 392 543 2.2E-54 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 Pfam PF01343 Peptidase family S49 141 295 2.7E-47 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 PIRSF PIRSF001217 8 618 2.5E-232 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 PANTHER PTHR33209:SF1 1 614 8.9E-263 T 22-04-2016 APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 PANTHER PTHR33209 1 614 8.9E-263 T 22-04-2016 APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 1.4E-286 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APECO1_RS09465 718db2ee639ac741f4a6646f08ff21c8 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 335 541 3.2E-53 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 APECO1_RS02435 be68f5b324545aa409c01a83ed5dcb09 406 Pfam PF07690 Major Facilitator Superfamily 31 264 9.6E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS02435 be68f5b324545aa409c01a83ed5dcb09 406 SUPERFAMILY SSF103473 20 401 1.83E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS02435 be68f5b324545aa409c01a83ed5dcb09 406 Gene3D G3DSA:1.20.1250.20 229 401 3.0E-21 T 22-04-2016 APECO1_RS02435 be68f5b324545aa409c01a83ed5dcb09 406 Gene3D G3DSA:1.20.1250.20 27 206 2.9E-21 T 22-04-2016 APECO1_RS02435 be68f5b324545aa409c01a83ed5dcb09 406 PANTHER PTHR23505:SF8 1 406 2.7E-176 T 22-04-2016 APECO1_RS02435 be68f5b324545aa409c01a83ed5dcb09 406 PANTHER PTHR23505 1 406 2.7E-176 T 22-04-2016 APECO1_RS15940 5f5bea946680b3e8d429470944a5abd5 268 Pfam PF00899 ThiF family 20 260 3.2E-37 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APECO1_RS15940 5f5bea946680b3e8d429470944a5abd5 268 Gene3D G3DSA:3.40.50.720 5 262 1.0E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS15940 5f5bea946680b3e8d429470944a5abd5 268 SUPERFAMILY SSF69572 10 259 1.27E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APECO1_RS15940 5f5bea946680b3e8d429470944a5abd5 268 PANTHER PTHR10953 1 165 1.7E-154 T 22-04-2016 APECO1_RS15940 5f5bea946680b3e8d429470944a5abd5 268 PANTHER PTHR10953 198 266 1.7E-154 T 22-04-2016 APECO1_RS15940 5f5bea946680b3e8d429470944a5abd5 268 PANTHER PTHR10953:SF159 1 165 1.7E-154 T 22-04-2016 APECO1_RS15940 5f5bea946680b3e8d429470944a5abd5 268 PANTHER PTHR10953:SF159 198 266 1.7E-154 T 22-04-2016 APECO1_RS06220 bf3a81efa85f7cb3970d059a3868d758 122 Pfam PF05666 Fels-1 Prophage Protein-like 69 120 1.4E-18 T 22-04-2016 IPR008617 Uncharacterised protein family, YcgJ APECO1_RS06220 bf3a81efa85f7cb3970d059a3868d758 122 Pfam PF05666 Fels-1 Prophage Protein-like 22 61 1.0E-14 T 22-04-2016 IPR008617 Uncharacterised protein family, YcgJ APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 1.3E-199 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 1.7E-41 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 PANTHER PTHR30525 1 391 5.8E-238 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 Gene3D G3DSA:3.40.50.720 1 150 3.3E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 PIRSF PIRSF006205 1 398 5.5E-161 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 47.549 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 Gene3D G3DSA:1.10.1740.10 313 395 9.0E-31 T 22-04-2016 APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 SUPERFAMILY SSF55347 126 274 1.11E-62 T 22-04-2016 APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 5.8E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 SUPERFAMILY SSF51735 2 150 8.75E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 7.0E-50 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS00915 e4308406586a9f4238a93344fa766638 398 SUPERFAMILY SSF69055 301 393 1.7E-30 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 8.9E-239 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.818 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 PANTHER PTHR11262:SF3 218 443 4.9E-214 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 PANTHER PTHR11262:SF3 1 105 4.9E-214 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 SMART SM01086 335 434 3.3E-22 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.10 111 177 3.3E-34 T 22-04-2016 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.10 213 243 3.3E-34 T 22-04-2016 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 2.3E-5 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:1.10.8.60 335 443 2.1E-34 T 22-04-2016 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 SUPERFAMILY SSF52540 3 441 5.13E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:3.40.50.300 245 331 6.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 Gene3D G3DSA:3.40.50.300 3 110 6.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 SMART SM00382 49 332 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 106 6.9E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 PANTHER PTHR11262 218 443 4.9E-214 T 22-04-2016 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 PANTHER PTHR11262 1 105 4.9E-214 T 22-04-2016 APECO1_RS22420 31936f801679313e38a4900fbcf62ec5 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 329 8.6E-43 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS21265 89f4e395d961f21495741ae5f17800b1 257 PANTHER PTHR24220:SF560 12 252 3.6E-199 T 22-04-2016 APECO1_RS21265 89f4e395d961f21495741ae5f17800b1 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS21265 89f4e395d961f21495741ae5f17800b1 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 257 1.6E-121 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 APECO1_RS21265 89f4e395d961f21495741ae5f17800b1 257 SMART SM00382 35 237 1.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS21265 89f4e395d961f21495741ae5f17800b1 257 SUPERFAMILY SSF52540 11 243 2.66E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21265 89f4e395d961f21495741ae5f17800b1 257 PANTHER PTHR24220 12 252 3.6E-199 T 22-04-2016 APECO1_RS21265 89f4e395d961f21495741ae5f17800b1 257 Gene3D G3DSA:3.40.50.300 11 251 1.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21265 89f4e395d961f21495741ae5f17800b1 257 Pfam PF00005 ABC transporter 26 181 1.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 PIRSF PIRSF026306 1 1171 0.0 T 22-04-2016 IPR016834 Uncharacterised conserved protein UCP026306 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 Gene3D G3DSA:3.40.50.300 791 820 3.3E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 Gene3D G3DSA:3.40.50.300 264 383 3.3E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 Gene3D G3DSA:3.40.50.300 690 750 3.3E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 Pfam PF13086 AAA domain 272 489 2.4E-9 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 Gene3D G3DSA:3.40.50.300 844 968 1.0E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 PANTHER PTHR10887:SF340 794 977 6.6E-71 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 PANTHER PTHR10887:SF340 560 759 6.6E-71 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 PANTHER PTHR10887:SF340 268 346 6.6E-71 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 PANTHER PTHR10887:SF340 139 149 6.6E-71 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 Pfam PF13087 AAA domain 776 969 9.9E-24 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 Gene3D G3DSA:3.30.870.10 1010 1165 3.4E-14 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 SUPERFAMILY SSF52540 791 977 1.92E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 SUPERFAMILY SSF52540 492 560 1.92E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 SUPERFAMILY SSF52540 269 347 1.92E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 SUPERFAMILY SSF52540 636 727 1.92E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 PANTHER PTHR10887 794 977 6.6E-71 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 PANTHER PTHR10887 560 759 6.6E-71 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 PANTHER PTHR10887 268 346 6.6E-71 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 PANTHER PTHR10887 139 149 6.6E-71 T 22-04-2016 APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 Pfam PF13091 PLD-like domain 1027 1136 8.8E-9 T 22-04-2016 IPR025202 Phospholipase D-like domain APECO1_RS16815 5c040d20a7aebea88ceb392eac6f037e 1171 SUPERFAMILY SSF56024 1010 1165 7.53E-14 T 22-04-2016 APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 PANTHER PTHR24220:SF308 12 387 2.9E-166 T 22-04-2016 APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 Pfam PF00005 ABC transporter 278 432 3.5E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 Pfam PF00005 ABC transporter 26 178 5.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 SUPERFAMILY SSF52540 273 483 2.24E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 Gene3D G3DSA:3.40.50.300 17 234 5.6E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 Gene3D G3DSA:3.40.50.300 272 485 6.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 SUPERFAMILY SSF52540 17 229 8.42E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 SMART SM00382 35 226 2.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 SMART SM00382 287 480 1.6E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS14405 305fa96794c263f6ad18bd4a0ef95712 503 PANTHER PTHR24220 12 387 2.9E-166 T 22-04-2016 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 PIRSF PIRSF004491 1 312 8.9E-105 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 Pfam PF06574 FAD synthetase 13 168 6.0E-58 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 Gene3D G3DSA:3.40.50.620 1 180 2.6E-66 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 SUPERFAMILY SSF52374 17 177 6.19E-33 T 22-04-2016 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 PANTHER PTHR22749 1 309 3.8E-141 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 Pfam PF01687 Riboflavin kinase 185 307 4.1E-37 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 307 1.5E-123 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 SMART SM00904 184 308 1.2E-61 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 SUPERFAMILY SSF82114 175 308 3.27E-43 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 Gene3D G3DSA:2.40.30.30 181 307 4.1E-39 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 APECO1_RS00125 25ec4f764e87614d7859601d579758d8 313 PANTHER PTHR22749:SF0 1 309 3.8E-141 T 22-04-2016 APECO1_RS12440 38687cab3a0fa76b25392c26ab030414 562 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 16 559 2.6E-240 T 22-04-2016 IPR018671 Protein of unknown function DUF2138 APECO1_RS00695 df913a3d1abf25322b604f6a27a83f83 308 Pfam PF00005 ABC transporter 21 165 3.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS00695 df913a3d1abf25322b604f6a27a83f83 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS00695 df913a3d1abf25322b604f6a27a83f83 308 SUPERFAMILY SSF52540 3 232 2.77E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00695 df913a3d1abf25322b604f6a27a83f83 308 SMART SM00382 30 213 3.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS00695 df913a3d1abf25322b604f6a27a83f83 308 PANTHER PTHR24220:SF305 6 303 1.8E-191 T 22-04-2016 APECO1_RS00695 df913a3d1abf25322b604f6a27a83f83 308 Gene3D G3DSA:3.40.50.300 2 228 3.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00695 df913a3d1abf25322b604f6a27a83f83 308 PANTHER PTHR24220 6 303 1.8E-191 T 22-04-2016 APECO1_RS23595 7d1a88b095b80496a6d16a9d46c36d98 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 1.5E-149 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APECO1_RS23595 7d1a88b095b80496a6d16a9d46c36d98 446 PANTHER PTHR36106 2 444 0.0 T 22-04-2016 APECO1_RS23595 7d1a88b095b80496a6d16a9d46c36d98 446 PANTHER PTHR36106:SF3 2 444 0.0 T 22-04-2016 APECO1_RS23595 7d1a88b095b80496a6d16a9d46c36d98 446 PIRSF PIRSF004539 1 444 4.6E-197 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APECO1_RS23595 7d1a88b095b80496a6d16a9d46c36d98 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 2.0E-203 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 175 193 3.4E-40 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 194 211 3.4E-40 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 154 175 3.4E-40 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 PRINTS PR01374 Gram-negative bacterial tonB protein signature 91 101 3.4E-40 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 SUPERFAMILY SSF74653 152 221 5.49E-22 T 22-04-2016 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 159 226 4.8E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 160 232 3.4E-21 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 PANTHER PTHR33446:SF1 1 238 2.1E-68 T 22-04-2016 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 PANTHER PTHR33446 1 238 2.1E-68 T 22-04-2016 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 Gene3D G3DSA:3.30.1150.10 129 233 2.9E-13 T 22-04-2016 APECO1_RS06630 d21e3590b99f49011bc284a578fe444c 238 Pfam PF16031 TonB N-terminal region 33 156 2.2E-36 T 22-04-2016 APECO1_RS02800 e15ed9f7b8fd12976548f294a6dc9c98 372 PANTHER PTHR36510 1 372 9.0E-193 T 22-04-2016 APECO1_RS02800 e15ed9f7b8fd12976548f294a6dc9c98 372 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 1.7E-93 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APECO1_RS02800 e15ed9f7b8fd12976548f294a6dc9c98 372 PANTHER PTHR36510:SF1 1 372 9.0E-193 T 22-04-2016 APECO1_RS02800 e15ed9f7b8fd12976548f294a6dc9c98 372 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 372 92.343 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APECO1_RS02800 e15ed9f7b8fd12976548f294a6dc9c98 372 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 296 1.2E-118 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APECO1_RS02800 e15ed9f7b8fd12976548f294a6dc9c98 372 SUPERFAMILY SSF55931 4 369 5.69E-109 T 22-04-2016 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 Gene3D G3DSA:1.10.1060.10 8 128 1.0E-34 T 22-04-2016 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 SUPERFAMILY SSF51971 126 346 1.77E-47 T 22-04-2016 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 PANTHER PTHR11938:SF50 3 268 1.5E-168 T 22-04-2016 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 PRINTS PR00419 Adrenodoxin reductase family signature 126 148 2.0E-17 T 22-04-2016 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 PRINTS PR00419 Adrenodoxin reductase family signature 149 162 2.0E-17 T 22-04-2016 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 PRINTS PR00419 Adrenodoxin reductase family signature 290 303 2.0E-17 T 22-04-2016 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 PRINTS PR00419 Adrenodoxin reductase family signature 256 270 2.0E-17 T 22-04-2016 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 Gene3D G3DSA:3.50.50.60 268 407 5.2E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 PANTHER PTHR11938 3 268 1.5E-168 T 22-04-2016 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 SUPERFAMILY SSF46548 9 135 1.41E-26 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 126 394 3.4E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 7 113 3.9E-34 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APECO1_RS12000 7ce79e8641e52e009367cd37d635f575 412 Gene3D G3DSA:3.40.50.720 129 267 5.3E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 559 577 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 181 677 1.7E-144 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Gene3D G3DSA:3.20.20.60 370 680 3.8E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Gene3D G3DSA:3.40.930.10 688 830 6.3E-41 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 PANTHER PTHR22931 169 662 0.0 T 22-04-2016 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 PANTHER PTHR22931:SF24 169 662 0.0 T 22-04-2016 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 296 307 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 SUPERFAMILY SSF55594 5 89 1.7E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Gene3D G3DSA:3.50.30.10 245 365 4.4E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Pfam PF05524 PEP-utilising enzyme, N-terminal 143 237 2.7E-10 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 SUPERFAMILY SSF51621 366 661 9.42E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 689 829 8.1E-31 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Pfam PF00391 PEP-utilising enzyme, mobile domain 264 337 3.6E-16 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Gene3D G3DSA:1.10.274.10 149 244 1.0E-16 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Gene3D G3DSA:3.30.1340.10 6 89 1.9E-19 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 SUPERFAMILY SSF52009 236 355 3.92E-25 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 SUPERFAMILY SSF47831 147 254 1.19E-17 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Pfam PF00381 PTS HPr component phosphorylation site 7 84 2.0E-11 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 559 574 3.2E-20 T 22-04-2016 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 576 591 3.2E-20 T 22-04-2016 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 624 3.2E-20 T 22-04-2016 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 405 424 3.2E-20 T 22-04-2016 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 363 653 4.7E-114 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APECO1_RS22530 5f70fb1c5646874ac3dd8342e20bbf2c 833 SUPERFAMILY SSF55804 689 828 1.22E-29 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 PANTHER PTHR10438:SF288 1 134 9.6E-74 T 22-04-2016 APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 SUPERFAMILY SSF52833 3 112 8.69E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 Pfam PF00085 Thioredoxin 6 108 1.6E-18 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 Pfam PF14559 Tetratricopeptide repeat 124 190 8.8E-23 T 22-04-2016 APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 Pfam PF14561 Tetratricopeptide repeat 195 284 2.3E-28 T 22-04-2016 APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 SUPERFAMILY SSF48452 118 239 4.24E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 Gene3D G3DSA:1.25.40.10 110 196 4.1E-38 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 PANTHER PTHR10438 1 134 9.6E-74 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 Gene3D G3DSA:3.40.30.10 4 109 2.0E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02535 892fea1d7b221b0f4279a45f7cd4df9e 284 Gene3D G3DSA:1.25.40.10 197 284 2.0E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS02210 a3aebedd25ddedfe1ade83d1e8475627 105 PANTHER PTHR12735:SF23 1 104 3.2E-70 T 22-04-2016 APECO1_RS02210 a3aebedd25ddedfe1ade83d1e8475627 105 PIRSF PIRSF003113 1 100 9.8E-34 T 22-04-2016 IPR002634 BolA protein APECO1_RS02210 a3aebedd25ddedfe1ade83d1e8475627 105 PANTHER PTHR12735 1 104 3.2E-70 T 22-04-2016 APECO1_RS02210 a3aebedd25ddedfe1ade83d1e8475627 105 Pfam PF01722 BolA-like protein 11 84 1.7E-29 T 22-04-2016 IPR002634 BolA protein APECO1_RS02210 a3aebedd25ddedfe1ade83d1e8475627 105 Gene3D G3DSA:3.30.300.90 1 101 5.0E-32 T 22-04-2016 IPR002634 BolA protein APECO1_RS02210 a3aebedd25ddedfe1ade83d1e8475627 105 SUPERFAMILY SSF82657 1 89 7.85E-31 T 22-04-2016 IPR002634 BolA protein APECO1_RS09795 b89972f7b70346a6ffd6915ae7d9e200 293 Pfam PF01435 Peptidase family M48 73 288 3.1E-39 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APECO1_RS09795 b89972f7b70346a6ffd6915ae7d9e200 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 27.11 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 APECO1_RS09795 b89972f7b70346a6ffd6915ae7d9e200 293 PANTHER PTHR10120 1 287 4.3E-115 T 22-04-2016 APECO1_RS09795 b89972f7b70346a6ffd6915ae7d9e200 293 Gene3D G3DSA:3.30.2010.10 69 156 4.4E-32 T 22-04-2016 APECO1_RS09795 b89972f7b70346a6ffd6915ae7d9e200 293 PANTHER PTHR10120:SF19 1 287 4.3E-115 T 22-04-2016 APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 SUPERFAMILY SSF53686 5 390 3.67E-142 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 375 4.4E-51 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 PANTHER PTHR10314 7 396 2.0E-225 T 22-04-2016 APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 Gene3D G3DSA:3.40.50.1100 97 176 5.3E-21 T 22-04-2016 APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 3.9E-189 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 PANTHER PTHR10314:SF3 7 396 2.0E-225 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 Gene3D G3DSA:3.40.50.1100 177 392 3.1E-93 T 22-04-2016 APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 PIRSF PIRSF001413 1 397 1.1E-172 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APECO1_RS06980 a6819d8f97966275783cc4746e5a216c 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.365 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APECO1_RS16365 c6c906e0909d680b1efc94d9b2b6c727 466 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 445 4.9E-137 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS16365 c6c906e0909d680b1efc94d9b2b6c727 466 PANTHER PTHR11119:SF44 9 466 9.4E-236 T 22-04-2016 APECO1_RS16365 c6c906e0909d680b1efc94d9b2b6c727 466 PANTHER PTHR11119 9 466 9.4E-236 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS16365 c6c906e0909d680b1efc94d9b2b6c727 466 Pfam PF00860 Permease family 22 415 5.0E-109 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS16365 c6c906e0909d680b1efc94d9b2b6c727 466 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS20500 60fda179ae009a535abe28c35b5d1630 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 2.5E-64 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS20500 60fda179ae009a535abe28c35b5d1630 154 PANTHER PTHR34986 2 154 3.4E-102 T 22-04-2016 APECO1_RS20500 60fda179ae009a535abe28c35b5d1630 154 SUPERFAMILY SSF51197 1 151 8.79E-45 T 22-04-2016 APECO1_RS20500 60fda179ae009a535abe28c35b5d1630 154 PANTHER PTHR34986:SF3 2 154 3.4E-102 T 22-04-2016 APECO1_RS20500 60fda179ae009a535abe28c35b5d1630 154 Gene3D G3DSA:2.60.120.370 1 152 2.2E-51 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS20500 60fda179ae009a535abe28c35b5d1630 154 Pfam PF04074 Domain of unknown function (DUF386) 1 149 3.7E-44 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Gene3D G3DSA:1.10.730.10 648 795 2.5E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.1E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.1E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.1E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.1E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.1E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.1E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.1E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PANTHER PTHR11946 240 571 0.0 T 22-04-2016 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PANTHER PTHR11946 614 859 0.0 T 22-04-2016 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.2E-79 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 821 7.0E-17 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Gene3D G3DSA:3.40.50.620 4 222 4.0E-151 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Gene3D G3DSA:3.40.50.620 425 573 4.0E-151 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Gene3D G3DSA:3.40.50.620 618 647 4.0E-151 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 SUPERFAMILY SSF47323 662 859 5.05E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 2.3E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 619 651 1.2E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 171 6.3E-26 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 SUPERFAMILY SSF50677 226 415 2.72E-58 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PANTHER PTHR11946:SF7 240 571 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PANTHER PTHR11946:SF7 614 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.316 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 Gene3D G3DSA:3.90.740.10 223 424 3.9E-62 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 SUPERFAMILY SSF52374 416 668 3.42E-140 T 22-04-2016 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 SUPERFAMILY SSF52374 5 226 3.42E-140 T 22-04-2016 APECO1_RS03120 c8a4dd290903c3749fe595b7fb0a3e52 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APECO1_RS16590 7dd7bc8d5b29efd3f99b99eab0ce557d 225 Pfam PF00005 ABC transporter 30 170 7.1E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS16590 7dd7bc8d5b29efd3f99b99eab0ce557d 225 PANTHER PTHR24220:SF435 30 219 5.9E-51 T 22-04-2016 APECO1_RS16590 7dd7bc8d5b29efd3f99b99eab0ce557d 225 PANTHER PTHR24220 30 219 5.9E-51 T 22-04-2016 APECO1_RS16590 7dd7bc8d5b29efd3f99b99eab0ce557d 225 SUPERFAMILY SSF52540 24 221 1.31E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16590 7dd7bc8d5b29efd3f99b99eab0ce557d 225 Gene3D G3DSA:3.40.50.300 28 221 2.6E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16590 7dd7bc8d5b29efd3f99b99eab0ce557d 225 SMART SM00382 27 210 3.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04615 614552507afa450a3638d4e4707001af 387 SUPERFAMILY SSF69279 15 178 3.85E-27 T 22-04-2016 APECO1_RS04615 614552507afa450a3638d4e4707001af 387 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 2.9E-47 T 22-04-2016 APECO1_RS14390 6b605e03dd089c80ceac7088efe78633 290 SUPERFAMILY SSF74650 2 287 7.53E-50 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS14390 6b605e03dd089c80ceac7088efe78633 290 Pfam PF01263 Aldose 1-epimerase 3 285 9.6E-48 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APECO1_RS14390 6b605e03dd089c80ceac7088efe78633 290 PANTHER PTHR10091 1 290 7.2E-169 T 22-04-2016 APECO1_RS14390 6b605e03dd089c80ceac7088efe78633 290 PANTHER PTHR10091:SF5 1 290 7.2E-169 T 22-04-2016 APECO1_RS14390 6b605e03dd089c80ceac7088efe78633 290 Gene3D G3DSA:2.70.98.10 3 287 1.2E-19 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.1E-178 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:1.10.150.300 131 200 9.3E-28 T 22-04-2016 IPR023192 TGS-like domain APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 47.029 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 SUPERFAMILY SSF52540 3 301 3.54E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.4E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 PANTHER PTHR23305 1 363 6.8E-216 T 22-04-2016 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:3.40.50.300 4 130 6.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:3.40.50.300 201 267 6.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 PIRSF PIRSF006641 1 363 7.6E-159 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 3.5E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 SUPERFAMILY SSF81271 279 359 4.14E-36 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS06375 bf175b8b27e0b0f0149dfaee2cbc710f 363 Gene3D G3DSA:3.10.20.30 268 363 2.5E-50 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS18725 8320e09ea701b839497fc780d53e597e 296 PANTHER PTHR32196:SF9 9 290 5.8E-62 T 22-04-2016 APECO1_RS18725 8320e09ea701b839497fc780d53e597e 296 Gene3D G3DSA:3.40.50.2300 144 288 1.4E-41 T 22-04-2016 APECO1_RS18725 8320e09ea701b839497fc780d53e597e 296 PANTHER PTHR32196 9 290 5.8E-62 T 22-04-2016 APECO1_RS18725 8320e09ea701b839497fc780d53e597e 296 Pfam PF13407 Periplasmic binding protein domain 31 280 4.7E-52 T 22-04-2016 IPR025997 Periplasmic binding protein APECO1_RS18725 8320e09ea701b839497fc780d53e597e 296 SUPERFAMILY SSF53822 9 294 3.05E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS18725 8320e09ea701b839497fc780d53e597e 296 Gene3D G3DSA:3.40.50.2300 27 143 3.0E-38 T 22-04-2016 APECO1_RS18065 e45a6199eb9ec98b0ea0d64bdf3b9719 443 Pfam PF03222 Tryptophan/tyrosine permease family 29 438 2.9E-8 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APECO1_RS18065 e45a6199eb9ec98b0ea0d64bdf3b9719 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 55.738 T 22-04-2016 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 APECO1_RS18065 e45a6199eb9ec98b0ea0d64bdf3b9719 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 5.2E-173 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS18065 e45a6199eb9ec98b0ea0d64bdf3b9719 443 PANTHER PTHR35334 1 443 0.0 T 22-04-2016 APECO1_RS18065 e45a6199eb9ec98b0ea0d64bdf3b9719 443 PANTHER PTHR35334:SF1 1 443 0.0 T 22-04-2016 APECO1_RS21070 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 5.4E-23 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain APECO1_RS21070 6bb27f9960fa9182d82beeeeb4bc8a5c 137 PANTHER PTHR11527:SF122 1 137 4.8E-46 T 22-04-2016 APECO1_RS21070 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 51.246 T 22-04-2016 IPR023728 Small heat shock protein IbpA APECO1_RS21070 6bb27f9960fa9182d82beeeeb4bc8a5c 137 PANTHER PTHR11527 1 137 4.8E-46 T 22-04-2016 IPR031107 Small heat shock protein HSP20 APECO1_RS21070 6bb27f9960fa9182d82beeeeb4bc8a5c 137 Gene3D G3DSA:2.60.40.790 4 137 3.9E-18 T 22-04-2016 IPR008978 HSP20-like chaperone APECO1_RS21070 6bb27f9960fa9182d82beeeeb4bc8a5c 137 SUPERFAMILY SSF49764 30 137 4.88E-20 T 22-04-2016 IPR008978 HSP20-like chaperone APECO1_RS21870 c8a8be71662375e3b9f2fdb3c8a3ab2c 222 Pfam PF00857 Isochorismatase family 20 213 8.6E-49 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS21870 c8a8be71662375e3b9f2fdb3c8a3ab2c 222 PANTHER PTHR11080:SF19 1 221 3.7E-89 T 22-04-2016 APECO1_RS21870 c8a8be71662375e3b9f2fdb3c8a3ab2c 222 Gene3D G3DSA:3.40.50.850 5 221 5.3E-73 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS21870 c8a8be71662375e3b9f2fdb3c8a3ab2c 222 PANTHER PTHR11080 1 221 3.7E-89 T 22-04-2016 APECO1_RS21870 c8a8be71662375e3b9f2fdb3c8a3ab2c 222 SUPERFAMILY SSF52499 4 220 7.06E-61 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS00430 febeb6c2343dfdcb5d71c621b1792cce 163 Pfam PF13710 ACT domain 12 73 2.7E-15 T 22-04-2016 APECO1_RS00430 febeb6c2343dfdcb5d71c621b1792cce 163 PANTHER PTHR30239 1 162 7.1E-98 T 22-04-2016 APECO1_RS00430 febeb6c2343dfdcb5d71c621b1792cce 163 SUPERFAMILY SSF55021 2 74 1.93E-22 T 22-04-2016 APECO1_RS00430 febeb6c2343dfdcb5d71c621b1792cce 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 7.0E-37 T 22-04-2016 APECO1_RS00430 febeb6c2343dfdcb5d71c621b1792cce 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 7.0E-69 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS00430 febeb6c2343dfdcb5d71c621b1792cce 163 SUPERFAMILY SSF55021 79 162 7.33E-26 T 22-04-2016 APECO1_RS00430 febeb6c2343dfdcb5d71c621b1792cce 163 Gene3D G3DSA:3.30.70.1150 83 162 3.0E-27 T 22-04-2016 APECO1_RS00430 febeb6c2343dfdcb5d71c621b1792cce 163 Gene3D G3DSA:3.30.70.260 1 76 8.3E-36 T 22-04-2016 APECO1_RS00430 febeb6c2343dfdcb5d71c621b1792cce 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 3.1E-23 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PANTHER PTHR11879:SF11 1 395 9.7E-284 T 22-04-2016 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 7.3E-40 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 7.3E-40 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 7.3E-40 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 7.3E-40 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 PANTHER PTHR11879 1 395 9.7E-284 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 Pfam PF00155 Aminotransferase class I and II 28 392 1.5E-95 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 Gene3D G3DSA:3.40.640.10 45 315 4.5E-108 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS04750 6a9e314e3fff4ffd1d6dbd79caf6e201 396 SUPERFAMILY SSF53383 1 396 9.67E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS00335 9f2ff27207c89b64eb81fa0cbd5b5a39 231 Gene3D G3DSA:3.40.225.10 2 231 7.1E-75 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS00335 9f2ff27207c89b64eb81fa0cbd5b5a39 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 6.6E-49 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS00335 9f2ff27207c89b64eb81fa0cbd5b5a39 231 SUPERFAMILY SSF53639 1 223 3.14E-71 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS00335 9f2ff27207c89b64eb81fa0cbd5b5a39 231 SMART SM01007 7 198 3.8E-72 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS00335 9f2ff27207c89b64eb81fa0cbd5b5a39 231 PANTHER PTHR22789:SF8 1 231 1.1E-158 T 22-04-2016 APECO1_RS00335 9f2ff27207c89b64eb81fa0cbd5b5a39 231 Hamap MF_00989 L-ribulose-5-phosphate 4-epimerase [araD]. 1 231 72.041 T 22-04-2016 APECO1_RS00335 9f2ff27207c89b64eb81fa0cbd5b5a39 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 4.6E-135 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 APECO1_RS00335 9f2ff27207c89b64eb81fa0cbd5b5a39 231 PANTHER PTHR22789 1 231 1.1E-158 T 22-04-2016 APECO1_RS17560 4686963047251b5cab75a0dffeb0c34c 535 Gene3D G3DSA:3.90.76.10 42 217 7.9E-51 T 22-04-2016 APECO1_RS17560 4686963047251b5cab75a0dffeb0c34c 535 SUPERFAMILY SSF53850 26 528 2.79E-134 T 22-04-2016 APECO1_RS17560 4686963047251b5cab75a0dffeb0c34c 535 Gene3D G3DSA:3.10.105.10 292 503 3.8E-60 T 22-04-2016 APECO1_RS17560 4686963047251b5cab75a0dffeb0c34c 535 PANTHER PTHR30290 1 533 7.4E-183 T 22-04-2016 APECO1_RS17560 4686963047251b5cab75a0dffeb0c34c 535 PIRSF PIRSF002741 3 535 5.6E-105 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APECO1_RS17560 4686963047251b5cab75a0dffeb0c34c 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 453 6.7E-80 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS17560 4686963047251b5cab75a0dffeb0c34c 535 PANTHER PTHR30290:SF10 1 533 7.4E-183 T 22-04-2016 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 SUPERFAMILY SSF53822 68 338 4.91E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 Gene3D G3DSA:3.40.50.2300 174 338 8.3E-68 T 22-04-2016 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 Gene3D G3DSA:3.40.50.2300 66 173 7.8E-31 T 22-04-2016 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 1.6E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 PANTHER PTHR30146 9 339 5.2E-154 T 22-04-2016 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 Pfam PF13377 Periplasmic binding protein-like domain 176 337 2.5E-44 T 22-04-2016 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 SUPERFAMILY SSF47413 10 67 7.88E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 PANTHER PTHR30146:SF4 9 339 5.2E-154 T 22-04-2016 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 Gene3D G3DSA:1.10.260.40 10 65 1.4E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS22435 5c777df608588d438894558893bfb5cc 341 SMART SM00354 9 79 1.1E-30 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS06295 64e37d7b5ef3ab5e87fac5da254bcb61 304 PANTHER PTHR30237:SF2 4 303 8.7E-125 T 22-04-2016 APECO1_RS06295 64e37d7b5ef3ab5e87fac5da254bcb61 304 PIRSF PIRSF028757 1 300 1.8E-90 T 22-04-2016 IPR003507 Peptidase family S66 APECO1_RS06295 64e37d7b5ef3ab5e87fac5da254bcb61 304 SUPERFAMILY SSF141986 139 289 8.5E-43 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain APECO1_RS06295 64e37d7b5ef3ab5e87fac5da254bcb61 304 Pfam PF02016 LD-carboxypeptidase 6 284 1.6E-64 T 22-04-2016 IPR003507 Peptidase family S66 APECO1_RS06295 64e37d7b5ef3ab5e87fac5da254bcb61 304 Gene3D G3DSA:3.50.30.60 167 292 2.5E-43 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain APECO1_RS06295 64e37d7b5ef3ab5e87fac5da254bcb61 304 Gene3D G3DSA:3.40.50.10740 5 160 1.7E-39 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain APECO1_RS06295 64e37d7b5ef3ab5e87fac5da254bcb61 304 SUPERFAMILY SSF52317 5 160 2.56E-32 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS06295 64e37d7b5ef3ab5e87fac5da254bcb61 304 PANTHER PTHR30237 4 303 8.7E-125 T 22-04-2016 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 Gene3D G3DSA:3.30.420.40 120 217 1.4E-13 T 22-04-2016 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 Gene3D G3DSA:3.30.420.40 1 117 3.6E-22 T 22-04-2016 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 PANTHER PTHR10196 1 477 1.1E-299 T 22-04-2016 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 225 418 1.2E-22 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 SUPERFAMILY SSF53067 218 460 1.79E-43 T 22-04-2016 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 Gene3D G3DSA:3.30.420.40 220 466 1.6E-41 T 22-04-2016 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 PANTHER PTHR10196:SF65 1 477 1.1E-299 T 22-04-2016 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 110 1.0E-11 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 121 216 2.5E-7 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APECO1_RS15735 3621ddf6c755e13802ca2f166ba62270 492 SUPERFAMILY SSF53067 4 216 5.26E-37 T 22-04-2016 APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 PANTHER PTHR11993:SF22 12 131 9.5E-263 T 22-04-2016 APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 PANTHER PTHR11993:SF22 384 589 9.5E-263 T 22-04-2016 APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 PANTHER PTHR11993:SF22 201 272 9.5E-263 T 22-04-2016 APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 SUPERFAMILY SSF56762 12 582 4.06E-168 T 22-04-2016 IPR029014 NiFe hydrogenase-like APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 PANTHER PTHR11993 12 131 9.5E-263 T 22-04-2016 APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 PANTHER PTHR11993 384 589 9.5E-263 T 22-04-2016 APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 PANTHER PTHR11993 201 272 9.5E-263 T 22-04-2016 APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 573 582 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 Gene3D G3DSA:1.10.645.10 3 142 8.0E-201 T 22-04-2016 IPR029014 NiFe hydrogenase-like APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 Gene3D G3DSA:1.10.645.10 186 582 8.0E-201 T 22-04-2016 IPR029014 NiFe hydrogenase-like APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 54 79 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 APECO1_RS04955 7195ef66926134f57aacea5ead9f72ca 597 Pfam PF00374 Nickel-dependent hydrogenase 54 582 4.8E-221 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 APECO1_RS13180 6cd37e1c71e1e8410ae18b706459a773 120 Gene3D G3DSA:3.30.1330.70 1 119 4.4E-37 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS13180 6cd37e1c71e1e8410ae18b706459a773 120 PIRSF PIRSF001007 1 120 2.3E-52 T 22-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 APECO1_RS13180 6cd37e1c71e1e8410ae18b706459a773 120 SUPERFAMILY SSF103084 1 117 9.81E-31 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS13180 6cd37e1c71e1e8410ae18b706459a773 120 Pfam PF05866 Endodeoxyribonuclease RusA 9 114 2.5E-18 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS17755 c69c540402933d3587c8df8a572de901 553 Pfam PF15975 Flotillin 406 530 6.8E-37 T 22-04-2016 IPR031905 Flotillin, C-terminal domain APECO1_RS17755 c69c540402933d3587c8df8a572de901 553 Pfam PF01145 SPFH domain / Band 7 family 44 214 5.1E-18 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS17755 c69c540402933d3587c8df8a572de901 553 SMART SM00244 30 199 7.1E-25 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS17755 c69c540402933d3587c8df8a572de901 553 SUPERFAMILY SSF117892 61 202 2.62E-23 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS17755 c69c540402933d3587c8df8a572de901 553 PANTHER PTHR13806:SF2 1 531 3.5E-231 T 22-04-2016 APECO1_RS17755 c69c540402933d3587c8df8a572de901 553 PANTHER PTHR13806 1 531 3.5E-231 T 22-04-2016 IPR027705 Flotillin family APECO1_RS10810 47281b1e1bbcb218b961e59fd5e2ea29 265 SUPERFAMILY SSF55486 33 245 9.52E-40 T 22-04-2016 APECO1_RS10810 47281b1e1bbcb218b961e59fd5e2ea29 265 PANTHER PTHR30164 1 250 1.7E-100 T 22-04-2016 APECO1_RS10810 47281b1e1bbcb218b961e59fd5e2ea29 265 Pfam PF06167 Glucose-regulated metallo-peptidase M90 16 243 2.0E-61 T 22-04-2016 IPR010384 MtfA family APECO1_RS10810 47281b1e1bbcb218b961e59fd5e2ea29 265 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 63.307 T 22-04-2016 IPR010384 MtfA family APECO1_RS10810 47281b1e1bbcb218b961e59fd5e2ea29 265 Gene3D G3DSA:3.40.390.10 31 244 7.6E-26 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APECO1_RS18220 581e947f56b483adb53bd4ad48fa63b2 100 SMART SM00465 2 81 5.9E-4 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APECO1_RS18220 581e947f56b483adb53bd4ad48fa63b2 100 Pfam PF01541 GIY-YIG catalytic domain 4 75 9.6E-14 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APECO1_RS18220 581e947f56b483adb53bd4ad48fa63b2 100 PANTHER PTHR34477 1 100 1.2E-46 T 22-04-2016 APECO1_RS18220 581e947f56b483adb53bd4ad48fa63b2 100 PANTHER PTHR34477:SF1 1 100 1.2E-46 T 22-04-2016 APECO1_RS18220 581e947f56b483adb53bd4ad48fa63b2 100 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 1 92 32.519 T 22-04-2016 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease APECO1_RS18220 581e947f56b483adb53bd4ad48fa63b2 100 SUPERFAMILY SSF82771 3 72 3.4E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APECO1_RS18555 b07f5eb7a050c52d00c36de294a6ba3f 212 SUPERFAMILY SSF47616 82 208 1.42E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS18555 b07f5eb7a050c52d00c36de294a6ba3f 212 Gene3D G3DSA:1.20.1050.10 102 208 1.3E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS18555 b07f5eb7a050c52d00c36de294a6ba3f 212 PANTHER PTHR11260:SF44 9 208 2.9E-126 T 22-04-2016 APECO1_RS18555 b07f5eb7a050c52d00c36de294a6ba3f 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 1.7E-13 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APECO1_RS18555 b07f5eb7a050c52d00c36de294a6ba3f 212 Gene3D G3DSA:3.40.30.10 7 101 1.8E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS18555 b07f5eb7a050c52d00c36de294a6ba3f 212 PANTHER PTHR11260 9 208 2.9E-126 T 22-04-2016 APECO1_RS18555 b07f5eb7a050c52d00c36de294a6ba3f 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 5.5E-20 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APECO1_RS18555 b07f5eb7a050c52d00c36de294a6ba3f 212 SUPERFAMILY SSF52833 7 90 2.76E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS24865 a9c6d270df3e0625269e9f0fb646f52a 300 Pfam PF09160 FimH, mannose binding 24 168 1.3E-61 T 22-04-2016 IPR015243 FimH, mannose-binding APECO1_RS24865 a9c6d270df3e0625269e9f0fb646f52a 300 Gene3D G3DSA:2.60.40.1090 22 179 2.1E-83 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS24865 a9c6d270df3e0625269e9f0fb646f52a 300 SUPERFAMILY SSF49401 181 300 2.09E-27 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS24865 a9c6d270df3e0625269e9f0fb646f52a 300 SUPERFAMILY SSF49401 22 179 5.22E-70 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS24865 a9c6d270df3e0625269e9f0fb646f52a 300 Gene3D G3DSA:2.60.40.1090 180 300 6.0E-36 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS24865 a9c6d270df3e0625269e9f0fb646f52a 300 Pfam PF00419 Fimbrial protein 173 300 1.3E-10 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS03105 b458251ed6324023fcc06c87a8e71ee9 213 Pfam PF01467 Cytidylyltransferase-like 7 187 8.6E-38 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APECO1_RS03105 b458251ed6324023fcc06c87a8e71ee9 213 PANTHER PTHR12039 1 213 4.5E-63 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APECO1_RS03105 b458251ed6324023fcc06c87a8e71ee9 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 30.158 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APECO1_RS03105 b458251ed6324023fcc06c87a8e71ee9 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 9.8E-64 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APECO1_RS03105 b458251ed6324023fcc06c87a8e71ee9 213 SUPERFAMILY SSF52374 3 213 1.44E-59 T 22-04-2016 APECO1_RS03105 b458251ed6324023fcc06c87a8e71ee9 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 68 1.1E-12 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APECO1_RS03105 b458251ed6324023fcc06c87a8e71ee9 213 Gene3D G3DSA:3.40.50.620 6 213 6.4E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS13045 acb735a77599b3b032d507372ef726d0 50 Pfam PF03869 Arc-like DNA binding domain 8 47 4.0E-12 T 22-04-2016 IPR005569 Arc-like DNA binding domain GO:0003677 APECO1_RS13045 acb735a77599b3b032d507372ef726d0 50 SUPERFAMILY SSF47598 3 47 4.08E-11 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APECO1_RS13045 acb735a77599b3b032d507372ef726d0 50 Gene3D G3DSA:1.10.1220.10 3 48 6.2E-16 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 3.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 1.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PANTHER PTHR24423:SF564 6 101 1.2E-156 T 22-04-2016 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PANTHER PTHR24423:SF564 152 428 1.2E-156 T 22-04-2016 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 Gene3D G3DSA:3.30.565.10 274 425 1.2E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SUPERFAMILY SSF47384 194 271 6.47E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PANTHER PTHR24423 6 101 1.2E-156 T 22-04-2016 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 PANTHER PTHR24423 152 428 1.2E-156 T 22-04-2016 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 Gene3D G3DSA:1.10.287.130 201 267 4.6E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SMART SM00388 211 271 5.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 1.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SUPERFAMILY SSF55874 261 424 4.32E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SMART SM00304 158 210 1.4E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS08640 5ab3597e3e64d326fd99bf2f8c3fe03c 433 SMART SM00387 315 425 5.5E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS19895 84f1e1d60a5122be1bc20de7c4fada6a 405 Gene3D G3DSA:1.20.1250.20 18 199 1.7E-18 T 22-04-2016 APECO1_RS19895 84f1e1d60a5122be1bc20de7c4fada6a 405 Gene3D G3DSA:1.20.1250.20 219 397 3.6E-19 T 22-04-2016 APECO1_RS19895 84f1e1d60a5122be1bc20de7c4fada6a 405 PANTHER PTHR23517:SF4 1 405 1.5E-197 T 22-04-2016 APECO1_RS19895 84f1e1d60a5122be1bc20de7c4fada6a 405 PANTHER PTHR23517 1 405 1.5E-197 T 22-04-2016 APECO1_RS19895 84f1e1d60a5122be1bc20de7c4fada6a 405 Pfam PF07690 Major Facilitator Superfamily 25 305 8.9E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS19895 84f1e1d60a5122be1bc20de7c4fada6a 405 SUPERFAMILY SSF103473 17 395 5.89E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS19895 84f1e1d60a5122be1bc20de7c4fada6a 405 Hamap MF_01118 UPF0226 membrane protein . 3 394 29.619 T 22-04-2016 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily APECO1_RS04785 6b4d5a6f3e767dc847cf5527c9839c2f 263 PANTHER PTHR30151:SF22 6 263 9.5E-193 T 22-04-2016 APECO1_RS04785 6b4d5a6f3e767dc847cf5527c9839c2f 263 PANTHER PTHR30151 6 263 9.5E-193 T 22-04-2016 APECO1_RS04785 6b4d5a6f3e767dc847cf5527c9839c2f 263 SUPERFAMILY SSF161098 56 237 4.97E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04785 6b4d5a6f3e767dc847cf5527c9839c2f 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 8.3E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04785 6b4d5a6f3e767dc847cf5527c9839c2f 263 Gene3D G3DSA:1.10.3720.10 55 249 3.4E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PANTHER PTHR10422 33 614 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 SUPERFAMILY SSF81442 43 560 5.23E-180 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 3.2E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 PANTHER PTHR10422:SF26 33 614 0.0 T 22-04-2016 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 Gene3D G3DSA:1.20.210.10 40 589 1.2E-190 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS02190 d538bcaafd2c39381572efd93acd371d 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 1.6E-135 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APECO1_RS03065 95df53110b4b0bff22f15b71a45ee620 87 Gene3D G3DSA:3.30.70.1460 1 87 1.8E-37 T 22-04-2016 IPR027471 YbeD-like domain APECO1_RS03065 95df53110b4b0bff22f15b71a45ee620 87 PANTHER PTHR38036:SF1 1 87 1.1E-42 T 22-04-2016 APECO1_RS03065 95df53110b4b0bff22f15b71a45ee620 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.681 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 APECO1_RS03065 95df53110b4b0bff22f15b71a45ee620 87 PANTHER PTHR38036 1 87 1.1E-42 T 22-04-2016 APECO1_RS03065 95df53110b4b0bff22f15b71a45ee620 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 5.6E-29 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 APECO1_RS03065 95df53110b4b0bff22f15b71a45ee620 87 SUPERFAMILY SSF117991 1 87 3.4E-31 T 22-04-2016 IPR027471 YbeD-like domain APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 SMART SM00984 324 420 1.2E-21 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 4.9E-60 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 PIRSF PIRSF000124 4 419 1.2E-77 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 SUPERFAMILY SSF52413 311 419 9.16E-25 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 Gene3D G3DSA:3.40.50.720 3 227 4.4E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 SUPERFAMILY SSF51735 5 198 6.85E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 PANTHER PTHR11374:SF4 1 420 1.4E-198 T 22-04-2016 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 3.2E-18 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 2.6E-119 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 PANTHER PTHR11374 1 420 1.4E-198 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 73.86 T 22-04-2016 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335|UniPathway: UPA00566 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.2E-26 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 Gene3D G3DSA:3.40.50.720 237 419 2.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 PIRSF PIRSF500136 1 420 3.8E-148 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 APECO1_RS21560 1ba0abb3f2a0d00e775ce52d660def45 420 SUPERFAMILY SSF48179 206 298 2.72E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS24535 8f4fe1b693cc25614d1e63196dfe9bc0 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 2.3E-72 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APECO1_RS24535 8f4fe1b693cc25614d1e63196dfe9bc0 212 Gene3D G3DSA:3.30.1060.10 7 199 2.7E-81 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APECO1_RS24535 8f4fe1b693cc25614d1e63196dfe9bc0 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.986 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APECO1_RS24535 8f4fe1b693cc25614d1e63196dfe9bc0 212 PANTHER PTHR10173 1 201 2.2E-111 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APECO1_RS24535 8f4fe1b693cc25614d1e63196dfe9bc0 212 PANTHER PTHR10173:SF6 1 201 2.2E-111 T 22-04-2016 APECO1_RS24535 8f4fe1b693cc25614d1e63196dfe9bc0 212 SUPERFAMILY SSF55068 5 208 1.83E-85 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APECO1_RS24535 8f4fe1b693cc25614d1e63196dfe9bc0 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 6.5E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APECO1_RS07185 8363268fa7b8ab3c96eca838750c1a4c 330 SMART SM00382 32 235 2.5E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS07185 8363268fa7b8ab3c96eca838750c1a4c 330 SUPERFAMILY SSF52540 3 264 3.03E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07185 8363268fa7b8ab3c96eca838750c1a4c 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 7.1E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS07185 8363268fa7b8ab3c96eca838750c1a4c 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.9E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS07185 8363268fa7b8ab3c96eca838750c1a4c 330 Gene3D G3DSA:3.40.50.300 2 260 2.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07185 8363268fa7b8ab3c96eca838750c1a4c 330 Pfam PF00005 ABC transporter 24 187 1.4E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS07185 8363268fa7b8ab3c96eca838750c1a4c 330 PANTHER PTHR24220:SF514 5 328 1.5E-222 T 22-04-2016 APECO1_RS07185 8363268fa7b8ab3c96eca838750c1a4c 330 PANTHER PTHR24220 5 328 1.5E-222 T 22-04-2016 APECO1_RS00105 7d663c0b9901e7b836a7b97f7db2462a 388 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 380 1.5E-199 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APECO1_RS00105 7d663c0b9901e7b836a7b97f7db2462a 388 Gene3D G3DSA:1.20.1530.10 2 385 3.2E-161 T 22-04-2016 IPR023171 Na/H antiporter domain APECO1_RS00105 7d663c0b9901e7b836a7b97f7db2462a 388 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 386 24.088 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APECO1_RS00105 7d663c0b9901e7b836a7b97f7db2462a 388 PANTHER PTHR30341:SF0 2 385 2.8E-213 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APECO1_RS00105 7d663c0b9901e7b836a7b97f7db2462a 388 PANTHER PTHR30341 2 385 2.8E-213 T 22-04-2016 APECO1_RS00105 7d663c0b9901e7b836a7b97f7db2462a 388 Pfam PF06965 Na+/H+ antiporter 1 6 380 2.0E-152 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APECO1_RS06460 316789ce55ffe8e9cd9c1a28f1283f75 117 PANTHER PTHR34874 2 117 6.4E-80 T 22-04-2016 APECO1_RS06460 316789ce55ffe8e9cd9c1a28f1283f75 117 PANTHER PTHR34874:SF2 2 117 6.4E-80 T 22-04-2016 APECO1_RS06460 316789ce55ffe8e9cd9c1a28f1283f75 117 Pfam PF02635 DsrE/DsrF-like family 2 117 4.6E-23 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APECO1_RS06460 316789ce55ffe8e9cd9c1a28f1283f75 117 Gene3D G3DSA:3.40.1260.10 1 117 2.1E-45 T 22-04-2016 IPR027396 DsrEFH-like APECO1_RS06460 316789ce55ffe8e9cd9c1a28f1283f75 117 SUPERFAMILY SSF75169 1 117 1.83E-35 T 22-04-2016 IPR027396 DsrEFH-like APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 PANTHER PTHR10584:SF183 1 315 3.3E-241 T 22-04-2016 APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 53 77 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 Pfam PF00294 pfkB family carbohydrate kinase 19 306 8.8E-53 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 SUPERFAMILY SSF53613 18 312 3.43E-52 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 PRINTS PR00990 Ribokinase signature 21 42 2.4E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 PRINTS PR00990 Ribokinase signature 191 206 2.4E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 PRINTS PR00990 Ribokinase signature 234 245 2.4E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 PRINTS PR00990 Ribokinase signature 48 67 2.4E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 Gene3D G3DSA:3.40.1190.20 18 317 6.6E-55 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 PANTHER PTHR10584 1 315 3.3E-241 T 22-04-2016 APECO1_RS11760 9e2dab05db4eb0ac77b9a57065c662e5 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 263 276 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS06895 4e7c8809fba0b6f9bd2ab8190bfc88d7 857 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 631 705 3.0E-20 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS06895 4e7c8809fba0b6f9bd2ab8190bfc88d7 857 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 476 817 1.6E-116 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS06895 4e7c8809fba0b6f9bd2ab8190bfc88d7 857 Pfam PF06791 Prophage tail length tape measure protein 54 256 1.3E-65 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal APECO1_RS11925 c992dfa66aabb52e19cb6f3984afcbe3 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 300 1.0E-60 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APECO1_RS11925 c992dfa66aabb52e19cb6f3984afcbe3 305 SUPERFAMILY SSF53850 26 303 3.8E-59 T 22-04-2016 APECO1_RS11925 c992dfa66aabb52e19cb6f3984afcbe3 305 PANTHER PTHR30177:SF12 25 304 1.6E-148 T 22-04-2016 APECO1_RS11925 c992dfa66aabb52e19cb6f3984afcbe3 305 Gene3D G3DSA:3.40.190.10 24 133 1.8E-57 T 22-04-2016 APECO1_RS11925 c992dfa66aabb52e19cb6f3984afcbe3 305 Gene3D G3DSA:3.40.190.10 254 304 1.8E-57 T 22-04-2016 APECO1_RS11925 c992dfa66aabb52e19cb6f3984afcbe3 305 Gene3D G3DSA:3.40.190.120 134 241 7.6E-27 T 22-04-2016 APECO1_RS11925 c992dfa66aabb52e19cb6f3984afcbe3 305 PANTHER PTHR30177 25 304 1.6E-148 T 22-04-2016 APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 Gene3D G3DSA:3.30.70.20 119 172 4.9E-19 T 22-04-2016 APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 6.5E-81 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 PANTHER PTHR11938:SF85 3 157 3.7E-82 T 22-04-2016 APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 SUPERFAMILY SSF54862 3 199 2.83E-71 T 22-04-2016 APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 PANTHER PTHR11938 3 157 3.7E-82 T 22-04-2016 APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 Gene3D G3DSA:3.30.70.20 75 118 1.2E-26 T 22-04-2016 APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 9.1E-30 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0026 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS04395 f64233bd1c609e5d66549657a48d9fe4 205 Gene3D G3DSA:3.30.70.20 4 74 3.3E-18 T 22-04-2016 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 31.908 T 22-04-2016 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 Pfam PF00708 Acylphosphatase 8 92 1.1E-26 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 Gene3D G3DSA:3.30.70.100 5 92 3.8E-33 T 22-04-2016 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 SUPERFAMILY SSF54975 2 92 5.23E-31 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 PANTHER PTHR10029 2 92 4.1E-40 T 22-04-2016 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 PRINTS PR00112 Acylphosphatase signature 61 81 1.7E-8 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 PRINTS PR00112 Acylphosphatase signature 26 51 1.7E-8 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS04930 bcb11f99d1418a09c64734f4adcaffb1 92 PRINTS PR00112 Acylphosphatase signature 5 20 1.7E-8 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS17255 a748e0ca5f64fd0e7ff0649b93943b21 1520 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1082 1465 3.3E-69 T 22-04-2016 IPR031161 Peptidase family M60 domain APECO1_RS17255 a748e0ca5f64fd0e7ff0649b93943b21 1520 SMART SM01276 1082 1382 1.8E-87 T 22-04-2016 IPR031161 Peptidase family M60 domain APECO1_RS17255 a748e0ca5f64fd0e7ff0649b93943b21 1520 PANTHER PTHR15730 1408 1514 0.0 T 22-04-2016 APECO1_RS17255 a748e0ca5f64fd0e7ff0649b93943b21 1520 PANTHER PTHR15730 911 1387 0.0 T 22-04-2016 APECO1_RS17255 a748e0ca5f64fd0e7ff0649b93943b21 1520 Pfam PF13322 Domain of unknown function (DUF4092) 417 585 6.4E-92 T 22-04-2016 IPR025385 Domain of unknown function DUF4092 APECO1_RS17255 a748e0ca5f64fd0e7ff0649b93943b21 1520 PANTHER PTHR15730:SF7 1408 1514 0.0 T 22-04-2016 APECO1_RS17255 a748e0ca5f64fd0e7ff0649b93943b21 1520 PANTHER PTHR15730:SF7 911 1387 0.0 T 22-04-2016 APECO1_RS17140 8109505aba9deeb3babf7a6eb6d2420d 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 470 620 1.3E-29 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APECO1_RS17140 8109505aba9deeb3babf7a6eb6d2420d 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 366 457 1.2E-13 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APECO1_RS17140 8109505aba9deeb3babf7a6eb6d2420d 675 Pfam PF05159 Capsule polysaccharide biosynthesis protein 38 299 5.5E-56 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APECO1_RS05840 a85bc0ef3d824b2e706e0428917a5a27 250 Pfam PF08861 Domain of unknown function DUF1828 26 110 3.3E-8 T 22-04-2016 IPR014960 Domain of unknown function DUF1828 APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 495 1.2E-35 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 PANTHER PTHR10799 159 237 5.0E-17 T 22-04-2016 APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 PANTHER PTHR10799 377 491 5.0E-17 T 22-04-2016 APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 Gene3D G3DSA:3.30.70.270 347 494 1.9E-34 T 22-04-2016 APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 494 1.7E-39 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 PANTHER PTHR10799:SF750 159 237 5.0E-17 T 22-04-2016 APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 PANTHER PTHR10799:SF750 377 491 5.0E-17 T 22-04-2016 APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 SUPERFAMILY SSF55073 349 495 1.88E-32 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 Pfam PF17155 Gammaproteobacterial periplasmic sensor domain 31 304 6.3E-150 T 22-04-2016 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 UniPathway: UPA00599 APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 SMART SM00267 333 496 2.9E-46 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS09565 36a09deff6e8d2dd584b30329ef1fdc0 496 Gene3D G3DSA:3.30.450.20 192 241 2.1E-5 T 22-04-2016 APECO1_RS06745 94ebdd32930287e246b8ca57aa7cee98 124 Pfam PF05866 Endodeoxyribonuclease RusA 8 110 6.6E-18 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS06745 94ebdd32930287e246b8ca57aa7cee98 124 Gene3D G3DSA:3.30.1330.70 2 116 9.8E-40 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS06745 94ebdd32930287e246b8ca57aa7cee98 124 PIRSF PIRSF001007 1 120 1.5E-51 T 22-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 APECO1_RS06745 94ebdd32930287e246b8ca57aa7cee98 124 SUPERFAMILY SSF103084 1 114 3.92E-31 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS03450 9fb955ddc07e5ebee1d23adef619db6e 348 PIRSF PIRSF038991 1 348 6.7E-100 T 22-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 APECO1_RS03450 9fb955ddc07e5ebee1d23adef619db6e 348 PANTHER PTHR38457 1 348 3.3E-101 T 22-04-2016 APECO1_RS03450 9fb955ddc07e5ebee1d23adef619db6e 348 Pfam PF05145 Putative ammonia monooxygenase 29 339 2.1E-98 T 22-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 APECO1_RS03450 9fb955ddc07e5ebee1d23adef619db6e 348 PANTHER PTHR38457:SF1 1 348 3.3E-101 T 22-04-2016 APECO1_RS03450 9fb955ddc07e5ebee1d23adef619db6e 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 6 160 2.8E-41 T 22-04-2016 IPR017516 AbrB duplication APECO1_RS03450 9fb955ddc07e5ebee1d23adef619db6e 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 183 339 3.0E-46 T 22-04-2016 IPR017516 AbrB duplication APECO1_RS18965 1d39cb39316a9c2998ec292730c96ef2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.9E-22 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18965 1d39cb39316a9c2998ec292730c96ef2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 22-04-2016 APECO1_RS18965 1d39cb39316a9c2998ec292730c96ef2 38 PANTHER PTHR18804 1 38 2.0E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18965 1d39cb39316a9c2998ec292730c96ef2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.2E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18965 1d39cb39316a9c2998ec292730c96ef2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.829 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18965 1d39cb39316a9c2998ec292730c96ef2 38 SUPERFAMILY SSF57840 1 38 5.89E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18965 1d39cb39316a9c2998ec292730c96ef2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS13680 bf7c0211457e35636f6dcd70efc4157e 141 SUPERFAMILY SSF55729 1 128 7.69E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS13680 bf7c0211457e35636f6dcd70efc4157e 141 PANTHER PTHR23091:SF274 1 129 9.7E-28 T 22-04-2016 APECO1_RS13680 bf7c0211457e35636f6dcd70efc4157e 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 46.559 T 22-04-2016 IPR023072 Acetyltransferase, YpeA GO:0016747 APECO1_RS13680 bf7c0211457e35636f6dcd70efc4157e 141 PANTHER PTHR23091 1 129 9.7E-28 T 22-04-2016 APECO1_RS13680 bf7c0211457e35636f6dcd70efc4157e 141 Pfam PF00583 Acetyltransferase (GNAT) family 48 124 7.0E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS13680 bf7c0211457e35636f6dcd70efc4157e 141 Gene3D G3DSA:3.40.630.30 1 123 8.0E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS23975 5c800eb9df76f39abb19cb8757849f6e 114 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 8.6E-6 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS23975 5c800eb9df76f39abb19cb8757849f6e 114 SUPERFAMILY SSF50129 2 114 9.59E-34 T 22-04-2016 IPR011032 GroES-like APECO1_RS23975 5c800eb9df76f39abb19cb8757849f6e 114 PANTHER PTHR11695:SF13 16 114 3.5E-51 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI APECO1_RS23975 5c800eb9df76f39abb19cb8757849f6e 114 PANTHER PTHR11695 16 114 3.5E-51 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS23975 5c800eb9df76f39abb19cb8757849f6e 114 Gene3D G3DSA:3.90.180.10 3 114 9.4E-29 T 22-04-2016 IPR011032 GroES-like APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 Pfam PF08245 Mur ligase middle domain 54 197 2.1E-10 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 SUPERFAMILY SSF53623 13 284 1.68E-89 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 Gene3D G3DSA:3.90.190.20 288 415 1.6E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 SUPERFAMILY SSF53244 286 414 4.58E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 346 8.6E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 8.5E-116 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 PIRSF PIRSF001563 6 419 1.9E-109 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 Gene3D G3DSA:3.40.1190.10 10 284 3.7E-94 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 PANTHER PTHR11136 16 420 1.4E-140 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APECO1_RS12860 5d7bf6086bbb19c9f77ae73201fcb845 422 PANTHER PTHR11136:SF0 16 420 1.4E-140 T 22-04-2016 APECO1_RS18715 7e665fd97b37c17a7dfbd280528c0fb1 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 1.3E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS18715 7e665fd97b37c17a7dfbd280528c0fb1 329 PANTHER PTHR32196:SF21 1 329 4.2E-111 T 22-04-2016 APECO1_RS18715 7e665fd97b37c17a7dfbd280528c0fb1 329 PANTHER PTHR32196 1 329 4.2E-111 T 22-04-2016 APECO1_RS16270 2e8772e4139a5c9333f3cfb4f88bd647 409 PANTHER PTHR35334:SF3 1 409 0.0 T 22-04-2016 APECO1_RS16270 2e8772e4139a5c9333f3cfb4f88bd647 409 PANTHER PTHR35334 1 409 0.0 T 22-04-2016 APECO1_RS16270 2e8772e4139a5c9333f3cfb4f88bd647 409 Pfam PF03222 Tryptophan/tyrosine permease family 16 379 4.7E-11 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Pfam PF02803 Thiolase, C-terminal domain 270 391 3.0E-52 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 PIRSF PIRSF000429 1 393 2.0E-131 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Gene3D G3DSA:3.40.47.10 194 275 6.2E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Gene3D G3DSA:3.40.47.10 3 123 6.2E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 SUPERFAMILY SSF53901 3 269 3.29E-84 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 SUPERFAMILY SSF53901 271 391 1.04E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 PANTHER PTHR18919:SF95 1 393 2.3E-236 T 22-04-2016 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 PANTHER PTHR18919 1 393 2.3E-236 T 22-04-2016 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Pfam PF00108 Thiolase, N-terminal domain 4 261 8.5E-103 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Gene3D G3DSA:3.40.47.10 276 391 3.2E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 Gene3D G3DSA:3.40.47.10 142 193 3.2E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 3.0E-142 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APECO1_RS16265 8aa52037f0d9dcfa9e55ff98916f9d1f 393 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 Gene3D G3DSA:3.30.300.30 423 517 1.3E-26 T 22-04-2016 APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 510 7.7E-15 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 Gene3D G3DSA:3.40.50.980 9 183 5.8E-39 T 22-04-2016 APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 Gene3D G3DSA:2.30.38.10 343 417 4.8E-23 T 22-04-2016 APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 Pfam PF00501 AMP-binding enzyme 17 426 1.2E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 Hamap MF_01524 Probable crotonobetaine/carnitine-CoA ligase [caiC]. 1 517 86.233 T 22-04-2016 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC GO:0009437|GO:0016878|GO:0051108|GO:0051109 UniPathway: UPA00117 APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 Gene3D G3DSA:3.40.50.980 184 342 1.6E-34 T 22-04-2016 APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 SUPERFAMILY SSF56801 9 517 3.27E-134 T 22-04-2016 APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 PANTHER PTHR24096 1 517 0.0 T 22-04-2016 APECO1_RS00215 3d701488633741df7ba367e643cb956c 517 PANTHER PTHR24096:SF182 1 517 0.0 T 22-04-2016 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 Gene3D G3DSA:3.40.50.720 20 107 1.5E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 PANTHER PTHR23135:SF5 14 469 2.4E-232 T 22-04-2016 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 9.0E-30 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 418 1.1E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 SUPERFAMILY SSF51984 20 106 2.88E-29 T 22-04-2016 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 PANTHER PTHR23135 14 469 2.4E-232 T 22-04-2016 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 4.4E-184 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 Pfam PF08245 Mur ligase middle domain 124 304 5.7E-28 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 SUPERFAMILY SSF53244 323 476 1.1E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 Gene3D G3DSA:3.90.190.20 326 477 2.0E-54 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 SUPERFAMILY SSF53623 105 322 8.11E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.513 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS00495 c30566f3b7b568df1f79d2f0d0465c2e 491 Gene3D G3DSA:3.40.1190.10 108 325 2.6E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 Gene3D G3DSA:3.40.50.10750 569 726 3.1E-55 T 22-04-2016 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 2.3E-102 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 PIRSF PIRSF036684 1 758 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 PANTHER PTHR23406 31 452 2.8E-179 T 22-04-2016 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 Gene3D G3DSA:3.40.50.10380 11 160 5.3E-52 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.3E-19 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 SUPERFAMILY SSF53659 430 754 1.89E-92 T 22-04-2016 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 SMART SM01274 18 151 2.4E-83 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 SMART SM00919 163 401 9.7E-142 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 Gene3D G3DSA:3.40.50.720 161 448 2.4E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 SUPERFAMILY SSF51735 163 453 2.08E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 SUPERFAMILY SSF53223 10 161 2.16E-54 T 22-04-2016 APECO1_RS13780 6ba08bc8fc138a44289d33c8b7cf2071 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 2.4E-29 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 PANTHER PTHR11649 1 459 1.7E-167 T 22-04-2016 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 SUPERFAMILY SSF52540 4 168 9.22E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 Gene3D G3DSA:3.40.50.300 3 159 2.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 Gene3D G3DSA:3.40.50.300 201 383 7.5E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.1E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.1E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 Hamap MF_00195 GTPase Der [der]. 2 461 39.842 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 Gene3D G3DSA:3.30.300.20 384 459 1.8E-23 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 PANTHER PTHR11649:SF5 1 459 1.7E-167 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 378 458 2.2E-26 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 Pfam PF01926 50S ribosome-binding GTPase 5 119 5.8E-29 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 Pfam PF01926 50S ribosome-binding GTPase 205 322 8.4E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 458 1.5E-179 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 SUPERFAMILY SSF52540 137 167 1.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 SUPERFAMILY SSF52540 200 464 1.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 PIRSF PIRSF006485 1 466 1.2E-179 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 4.0E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS14255 92237d3b19df2ee118bff514e47ce615 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 203 368 3.3E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS09080 961636817006badf81141c837d2a52cd 288 PANTHER PTHR21089 1 284 1.3E-100 T 22-04-2016 APECO1_RS09080 961636817006badf81141c837d2a52cd 288 SUPERFAMILY SSF51735 107 283 1.34E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09080 961636817006badf81141c837d2a52cd 288 Gene3D G3DSA:3.40.50.720 112 284 3.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09080 961636817006badf81141c837d2a52cd 288 Gene3D G3DSA:3.40.192.10 3 111 1.7E-37 T 22-04-2016 APECO1_RS09080 961636817006badf81141c837d2a52cd 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 5.2E-27 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS09080 961636817006badf81141c837d2a52cd 288 SUPERFAMILY SSF53223 4 106 3.86E-30 T 22-04-2016 APECO1_RS09080 961636817006badf81141c837d2a52cd 288 Hamap MF_01578 Quinate/shikimate dehydrogenase [ydiB]. 1 288 82.137 T 22-04-2016 IPR022872 Quinate/Shikimate dehydrogenase GO:0004764|GO:0030266|GO:0052733|GO:0052734|GO:0055114 KEGG: 00400+1.1.1.282|KEGG: 00620+1.1.1.28|MetaCyc: PWY-6163|MetaCyc: PWY-6454|MetaCyc: PWY-6901|UniPathway: UPA00053 APECO1_RS09080 961636817006badf81141c837d2a52cd 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 286 30.481 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS13895 7e55c0bebffb60251ac24fb39292189b 119 Pfam PF03960 ArsC family 8 117 2.9E-22 T 22-04-2016 IPR006660 Arsenate reductase-like APECO1_RS13895 7e55c0bebffb60251ac24fb39292189b 119 PANTHER PTHR30041 3 119 1.6E-69 T 22-04-2016 APECO1_RS13895 7e55c0bebffb60251ac24fb39292189b 119 PANTHER PTHR30041:SF4 3 119 1.6E-69 T 22-04-2016 APECO1_RS13895 7e55c0bebffb60251ac24fb39292189b 119 Gene3D G3DSA:3.40.30.10 4 118 1.3E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS13895 7e55c0bebffb60251ac24fb39292189b 119 SUPERFAMILY SSF52833 5 118 5.29E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS13895 7e55c0bebffb60251ac24fb39292189b 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 3.3E-48 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 APECO1_RS04400 7b63451adb9deabe747db49d6f412fef 287 PANTHER PTHR38095:SF2 2 287 9.4E-168 T 22-04-2016 APECO1_RS04400 7b63451adb9deabe747db49d6f412fef 287 PANTHER PTHR38095 2 287 9.4E-168 T 22-04-2016 APECO1_RS04400 7b63451adb9deabe747db49d6f412fef 287 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 277 7.3E-116 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 APECO1_RS22930 db46e7298cd337f87cd8ad5633d56d42 409 PANTHER PTHR11695 14 373 3.1E-108 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS22930 db46e7298cd337f87cd8ad5633d56d42 409 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 98 2.5E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS22930 db46e7298cd337f87cd8ad5633d56d42 409 PANTHER PTHR11695:SF551 14 373 3.1E-108 T 22-04-2016 APECO1_RS22930 db46e7298cd337f87cd8ad5633d56d42 409 Pfam PF00107 Zinc-binding dehydrogenase 187 325 3.2E-10 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS22930 db46e7298cd337f87cd8ad5633d56d42 409 Gene3D G3DSA:3.40.50.720 185 301 4.7E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22930 db46e7298cd337f87cd8ad5633d56d42 409 SUPERFAMILY SSF50129 3 189 2.44E-24 T 22-04-2016 IPR011032 GroES-like APECO1_RS22930 db46e7298cd337f87cd8ad5633d56d42 409 Gene3D G3DSA:3.90.180.10 1 184 1.6E-21 T 22-04-2016 IPR011032 GroES-like APECO1_RS22930 db46e7298cd337f87cd8ad5633d56d42 409 SUPERFAMILY SSF51735 169 330 7.0E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS23655 18b502d1420a8b81539be8520d37b65a 512 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 100 4.6E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS23655 18b502d1420a8b81539be8520d37b65a 512 PANTHER PTHR26402 1 117 4.8E-39 T 22-04-2016 APECO1_RS23655 18b502d1420a8b81539be8520d37b65a 512 PANTHER PTHR26402:SF557 1 117 4.8E-39 T 22-04-2016 APECO1_RS23655 18b502d1420a8b81539be8520d37b65a 512 SMART SM00862 24 100 2.7E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS23655 18b502d1420a8b81539be8520d37b65a 512 SUPERFAMILY SSF46894 2 102 3.4E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS23655 18b502d1420a8b81539be8520d37b65a 512 Gene3D G3DSA:1.25.40.10 354 375 4.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS23655 18b502d1420a8b81539be8520d37b65a 512 Gene3D G3DSA:1.25.40.10 420 485 4.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS23655 18b502d1420a8b81539be8520d37b65a 512 Gene3D G3DSA:1.10.10.10 2 103 1.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 181 203 4.9E-47 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 16 39 4.9E-47 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 132 151 4.9E-47 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 212 225 4.9E-47 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 54 78 4.9E-47 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 181 198 - T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 12 225 5.7E-78 T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 Pfam PF01292 Prokaryotic cytochrome b561 14 220 1.7E-35 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 SUPERFAMILY SSF81342 9 226 1.1E-39 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 Gene3D G3DSA:1.20.950.20 11 226 1.1E-26 T 22-04-2016 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 19 36 - T 22-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 PANTHER PTHR30485 1 235 6.1E-130 T 22-04-2016 APECO1_RS04960 9e0a8facfdae500ad904bc9517ff0761 235 PANTHER PTHR30485:SF0 1 235 6.1E-130 T 22-04-2016 APECO1_RS10700 8d583ebf98a386e158dbd8655ac97ed3 351 Pfam PF06147 Protein of unknown function (DUF968) 131 341 9.4E-64 T 22-04-2016 IPR010373 Protein of unknown function DUF968 APECO1_RS10700 8d583ebf98a386e158dbd8655ac97ed3 351 SMART SM00507 265 314 8.7E-6 T 22-04-2016 IPR003615 HNH nuclease APECO1_RS00415 c380c479ffe1594ca2c9a0dff2685480 28 Pfam PF08054 Leucine operon leader peptide 1 28 2.9E-18 T 22-04-2016 IPR012570 Leucine operon leader peptide GO:0009098 APECO1_RS22035 a16f36c6504ef00f96c61c9e35961cd2 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 10 144 1.8E-49 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 APECO1_RS22035 a16f36c6504ef00f96c61c9e35961cd2 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 10 169 5.2E-50 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 APECO1_RS22035 a16f36c6504ef00f96c61c9e35961cd2 175 Gene3D G3DSA:3.40.50.300 5 171 1.9E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22035 a16f36c6504ef00f96c61c9e35961cd2 175 SUPERFAMILY SSF52540 7 171 6.92E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22035 a16f36c6504ef00f96c61c9e35961cd2 175 PANTHER PTHR19136:SF82 8 145 1.0E-39 T 22-04-2016 APECO1_RS22035 a16f36c6504ef00f96c61c9e35961cd2 175 PANTHER PTHR19136 8 145 1.0E-39 T 22-04-2016 APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 Pfam PF01327 Polypeptide deformylase 4 152 1.5E-50 T 22-04-2016 IPR023635 Peptide deformylase APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 PANTHER PTHR10458:SF10 1 168 3.3E-111 T 22-04-2016 APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 Gene3D G3DSA:3.90.45.10 5 165 1.7E-63 T 22-04-2016 IPR023635 Peptide deformylase APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 32.054 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 101 119 1.1E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 89 100 1.1E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 PRINTS PR01576 Peptide deformylase signature 120 149 1.1E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 SUPERFAMILY SSF56420 3 164 1.02E-61 T 22-04-2016 IPR023635 Peptide deformylase APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.9E-66 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 PIRSF PIRSF004749 1 168 3.4E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APECO1_RS18900 6edaccfd0cf997a74924ac8da9f6b01f 169 PANTHER PTHR10458 1 168 3.3E-111 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APECO1_RS03230 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.10410 83 173 1.2E-31 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain APECO1_RS03230 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 PANTHER PTHR19288 3 247 3.0E-170 T 22-04-2016 APECO1_RS03230 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Pfam PF13242 HAD-hyrolase-like 174 246 4.5E-20 T 22-04-2016 APECO1_RS03230 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.8E-22 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA APECO1_RS03230 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 2.1E-65 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA APECO1_RS03230 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 SUPERFAMILY SSF56784 1 247 5.7E-65 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03230 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.1000 1 79 3.6E-39 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03230 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 Gene3D G3DSA:3.40.50.1000 174 247 3.6E-39 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03230 1a4dc8343b5f29efbb9a0fd6d8ec0df8 250 PANTHER PTHR19288:SF40 3 247 3.0E-170 T 22-04-2016 APECO1_RS05210 bbb4b6b5823c02a7aa9118c1988ecf4c 184 Gene3D G3DSA:1.10.3480.10 1 181 1.3E-51 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS05210 bbb4b6b5823c02a7aa9118c1988ecf4c 184 PANTHER PTHR34227:SF2 1 183 1.0E-87 T 22-04-2016 APECO1_RS05210 bbb4b6b5823c02a7aa9118c1988ecf4c 184 PANTHER PTHR34227 1 183 1.0E-87 T 22-04-2016 APECO1_RS05210 bbb4b6b5823c02a7aa9118c1988ecf4c 184 SUPERFAMILY SSF89155 2 180 5.49E-45 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS05210 bbb4b6b5823c02a7aa9118c1988ecf4c 184 PIRSF PIRSF004690 1 184 1.4E-58 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type APECO1_RS05210 bbb4b6b5823c02a7aa9118c1988ecf4c 184 Pfam PF02613 Nitrate reductase delta subunit 36 147 5.4E-15 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS04010 eba3221c3421cbe904b11e95ab056bbf 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 2.2E-137 T 22-04-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS04010 eba3221c3421cbe904b11e95ab056bbf 249 PANTHER PTHR10953 2 249 1.5E-91 T 22-04-2016 APECO1_RS04010 eba3221c3421cbe904b11e95ab056bbf 249 SUPERFAMILY SSF69572 3 248 3.4E-87 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APECO1_RS04010 eba3221c3421cbe904b11e95ab056bbf 249 Pfam PF00899 ThiF family 12 244 3.3E-64 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APECO1_RS04010 eba3221c3421cbe904b11e95ab056bbf 249 Gene3D G3DSA:3.40.50.720 3 249 3.0E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS13880 d0a863af2c08e2bba635085fb5147e18 156 SUPERFAMILY SSF52833 3 154 3.14E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS13880 d0a863af2c08e2bba635085fb5147e18 156 PANTHER PTHR10681 1 153 7.3E-51 T 22-04-2016 APECO1_RS13880 d0a863af2c08e2bba635085fb5147e18 156 Gene3D G3DSA:3.40.30.10 2 155 2.8E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS13880 d0a863af2c08e2bba635085fb5147e18 156 PIRSF PIRSF000239 1 153 1.3E-17 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APECO1_RS13880 d0a863af2c08e2bba635085fb5147e18 156 Pfam PF00578 AhpC/TSA family 7 134 4.4E-39 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APECO1_RS02625 774165773652537176cc384495a3be4d 349 Gene3D G3DSA:3.30.1370.60 72 271 4.3E-77 T 22-04-2016 APECO1_RS02625 774165773652537176cc384495a3be4d 349 Gene3D G3DSA:1.10.1530.10 1 71 1.2E-27 T 22-04-2016 APECO1_RS02625 774165773652537176cc384495a3be4d 349 PANTHER PTHR11091 1 335 1.9E-134 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS02625 774165773652537176cc384495a3be4d 349 Pfam PF02615 Malate/L-lactate dehydrogenase 3 331 4.5E-111 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS02625 774165773652537176cc384495a3be4d 349 TIGRFAM TIGR03175 AllD: ureidoglycolate dehydrogenase 1 349 2.5E-198 T 22-04-2016 IPR017590 Ureidoglycolate dehydrogenase KEGG: 00062+1.1.1.35|KEGG: 00071+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00230+1.1.1.350|KEGG: 00280+1.1.1.35|KEGG: 00281+1.1.1.35|KEGG: 00310+1.1.1.35|KEGG: 00362+1.1.1.35|KEGG: 00380+1.1.1.35|KEGG: 00623+1.1.1.35|KEGG: 00650+1.1.1.35|KEGG: 00720+1.1.1.35|KEGG: 00930+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5136|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|UniPathway: UPA00395 APECO1_RS02625 774165773652537176cc384495a3be4d 349 PANTHER PTHR11091:SF0 1 335 1.9E-134 T 22-04-2016 APECO1_RS02625 774165773652537176cc384495a3be4d 349 SUPERFAMILY SSF89733 1 334 2.22E-109 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS17685 f19a4773a800aa82d1fee69b33ceb7e5 598 Pfam PF05935 Arylsulfotransferase (ASST) 42 587 4.6E-175 T 22-04-2016 IPR010262 Arylsulfotransferase APECO1_RS17685 f19a4773a800aa82d1fee69b33ceb7e5 598 Hamap MF_00933 Arylsulfate sulfotransferase AssT [assT]. 1 598 95.695 T 22-04-2016 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria GO:0004062 APECO1_RS03265 47307c53c4d634bf646aadd8c254fb77 389 Pfam PF13088 BNR repeat-like domain 43 365 2.3E-66 T 22-04-2016 IPR011040 Sialidases APECO1_RS03265 47307c53c4d634bf646aadd8c254fb77 389 SUPERFAMILY SSF50939 28 269 1.07E-57 T 22-04-2016 IPR011040 Sialidases APECO1_RS03265 47307c53c4d634bf646aadd8c254fb77 389 SUPERFAMILY SSF50939 303 385 1.07E-57 T 22-04-2016 IPR011040 Sialidases APECO1_RS03265 47307c53c4d634bf646aadd8c254fb77 389 PANTHER PTHR33307:SF3 331 382 7.7E-79 T 22-04-2016 APECO1_RS03265 47307c53c4d634bf646aadd8c254fb77 389 PANTHER PTHR33307:SF3 30 284 7.7E-79 T 22-04-2016 APECO1_RS03265 47307c53c4d634bf646aadd8c254fb77 389 PANTHER PTHR33307 331 382 7.7E-79 T 22-04-2016 APECO1_RS03265 47307c53c4d634bf646aadd8c254fb77 389 PANTHER PTHR33307 30 284 7.7E-79 T 22-04-2016 APECO1_RS03265 47307c53c4d634bf646aadd8c254fb77 389 Gene3D G3DSA:2.120.10.10 305 386 1.4E-71 T 22-04-2016 IPR011040 Sialidases APECO1_RS03265 47307c53c4d634bf646aadd8c254fb77 389 Gene3D G3DSA:2.120.10.10 27 273 1.4E-71 T 22-04-2016 IPR011040 Sialidases APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 205 315 4.3E-37 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 Gene3D G3DSA:1.10.1060.10 184 330 9.6E-45 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 PANTHER PTHR11938 1 106 0.0 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 PANTHER PTHR11938 281 657 0.0 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 Gene3D G3DSA:3.30.70.20 5 173 7.7E-25 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 SUPERFAMILY SSF54862 196 293 2.01E-43 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 SUPERFAMILY SSF54862 1 161 2.01E-43 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 SUPERFAMILY SSF51971 327 582 5.0E-69 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 Pfam PF13247 4Fe-4S dicluster domain 55 144 3.2E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 PANTHER PTHR11938:SF89 1 106 0.0 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 PANTHER PTHR11938:SF89 281 657 0.0 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 Gene3D G3DSA:3.40.50.720 331 572 3.9E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 187 653 1.6E-264 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 328 640 5.2E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 Gene3D G3DSA:3.40.50.720 573 649 1.8E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 PRINTS PR00419 Adrenodoxin reductase family signature 505 518 1.5E-38 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 PRINTS PR00419 Adrenodoxin reductase family signature 471 485 1.5E-38 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 PRINTS PR00419 Adrenodoxin reductase family signature 394 404 1.5E-38 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 PRINTS PR00419 Adrenodoxin reductase family signature 352 365 1.5E-38 T 22-04-2016 APECO1_RS13805 f2097d4f969136cb8431ce1b8faf52bf 659 PRINTS PR00419 Adrenodoxin reductase family signature 329 351 1.5E-38 T 22-04-2016 APECO1_RS12820 f4eb4d7cb66164480bde4b4c647dc70e 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 224 2.2E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12820 f4eb4d7cb66164480bde4b4c647dc70e 238 PANTHER PTHR30450 1 237 2.3E-190 T 22-04-2016 APECO1_RS12820 f4eb4d7cb66164480bde4b4c647dc70e 238 SUPERFAMILY SSF161098 17 223 6.28E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12820 f4eb4d7cb66164480bde4b4c647dc70e 238 Gene3D G3DSA:1.10.3720.10 20 228 5.1E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12820 f4eb4d7cb66164480bde4b4c647dc70e 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 2.4E-13 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS12820 f4eb4d7cb66164480bde4b4c647dc70e 238 PANTHER PTHR30450:SF5 1 237 2.3E-190 T 22-04-2016 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 SUPERFAMILY SSF52540 9 250 6.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 PANTHER PTHR32071 1 325 2.9E-244 T 22-04-2016 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 323 2.5E-162 T 22-04-2016 IPR014317 Transcription activator PspF APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 SMART SM00382 28 180 2.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 SUPERFAMILY SSF46689 222 325 2.37E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 Gene3D G3DSA:1.10.8.60 180 253 8.4E-22 T 22-04-2016 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 Pfam PF02954 Bacterial regulatory protein, Fis family 286 322 5.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 PANTHER PTHR32071:SF38 1 325 2.9E-244 T 22-04-2016 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 Gene3D G3DSA:3.40.50.300 6 179 2.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 Gene3D G3DSA:1.10.10.60 277 325 3.5E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 289 306 6.1E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 306 325 6.1E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS07220 40e8bac26d608cb508403dbef01368a5 325 Pfam PF00158 Sigma-54 interaction domain 9 170 2.0E-62 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS18470 807399a263a7ef17d161ea3ef90afa6d 163 PANTHER PTHR30505 3 163 1.3E-87 T 22-04-2016 APECO1_RS18470 807399a263a7ef17d161ea3ef90afa6d 163 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 9.7E-63 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS18470 807399a263a7ef17d161ea3ef90afa6d 163 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS18470 807399a263a7ef17d161ea3ef90afa6d 163 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 1.2E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS18470 807399a263a7ef17d161ea3ef90afa6d 163 Gene3D G3DSA:3.40.930.10 3 157 1.1E-47 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS18470 807399a263a7ef17d161ea3ef90afa6d 163 SUPERFAMILY SSF55804 9 155 2.75E-42 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS18470 807399a263a7ef17d161ea3ef90afa6d 163 PANTHER PTHR30505:SF6 3 163 1.3E-87 T 22-04-2016 APECO1_RS20005 c2a2a507453813d4db15fd2112a4401d 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.999 T 22-04-2016 IPR019598 Universal stress protein B APECO1_RS20005 c2a2a507453813d4db15fd2112a4401d 111 Pfam PF10625 Universal stress protein B (UspB) 1 106 6.3E-55 T 22-04-2016 IPR019598 Universal stress protein B APECO1_RS09085 1bc36232f6babb150dd02556fe1fe296 252 Gene3D G3DSA:3.20.20.70 1 251 1.0E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS09085 1bc36232f6babb150dd02556fe1fe296 252 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 245 1.7E-87 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APECO1_RS09085 1bc36232f6babb150dd02556fe1fe296 252 Pfam PF01487 Type I 3-dehydroquinase 20 246 4.1E-70 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APECO1_RS09085 1bc36232f6babb150dd02556fe1fe296 252 PANTHER PTHR21089 16 251 3.6E-108 T 22-04-2016 APECO1_RS09085 1bc36232f6babb150dd02556fe1fe296 252 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 41.714 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APECO1_RS09085 1bc36232f6babb150dd02556fe1fe296 252 SUPERFAMILY SSF51569 1 251 1.21E-82 T 22-04-2016 APECO1_RS09085 1bc36232f6babb150dd02556fe1fe296 252 PANTHER PTHR21089:SF5 16 251 3.6E-108 T 22-04-2016 APECO1_RS09085 1bc36232f6babb150dd02556fe1fe296 252 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 22-04-2016 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APECO1_RS13685 c0103b782706c133ae4bf7e776ae772e 289 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 59 273 1.6E-51 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS13685 c0103b782706c133ae4bf7e776ae772e 289 SUPERFAMILY SSF53187 200 277 7.85E-55 T 22-04-2016 APECO1_RS13685 c0103b782706c133ae4bf7e776ae772e 289 SUPERFAMILY SSF53187 57 152 7.85E-55 T 22-04-2016 APECO1_RS13685 c0103b782706c133ae4bf7e776ae772e 289 PANTHER PTHR30404:SF2 29 283 3.3E-216 T 22-04-2016 APECO1_RS13685 c0103b782706c133ae4bf7e776ae772e 289 PANTHER PTHR30404 29 283 3.3E-216 T 22-04-2016 APECO1_RS13685 c0103b782706c133ae4bf7e776ae772e 289 SMART SM00646 118 273 4.0E-66 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS13685 c0103b782706c133ae4bf7e776ae772e 289 Gene3D G3DSA:3.40.630.40 57 153 4.7E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS13685 c0103b782706c133ae4bf7e776ae772e 289 Gene3D G3DSA:3.40.630.40 201 277 4.7E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 SUPERFAMILY SSF53633 6 301 1.06E-76 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PRINTS PR01469 Bacterial carbamate kinase signature 207 222 4.3E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 4.3E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PRINTS PR01469 Bacterial carbamate kinase signature 106 125 4.3E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PRINTS PR01469 Bacterial carbamate kinase signature 45 64 4.3E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PRINTS PR01469 Bacterial carbamate kinase signature 258 273 4.3E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PRINTS PR01469 Bacterial carbamate kinase signature 154 173 4.3E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PRINTS PR01469 Bacterial carbamate kinase signature 177 195 4.3E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PANTHER PTHR30409 2 304 2.9E-142 T 22-04-2016 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PANTHER PTHR30409:SF1 2 304 2.9E-142 T 22-04-2016 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 TIGRFAM TIGR00746 arcC: carbamate kinase 6 301 1.2E-113 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 Pfam PF00696 Amino acid kinase family 6 276 1.1E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 PIRSF PIRSF000723 3 303 6.4E-113 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS24680 cba5940da35b66c63520bc51619bae4c 314 Gene3D G3DSA:3.40.1160.10 5 301 8.0E-98 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS24365 2d698ba0618bb86f3cf22625a60bd137 354 PANTHER PTHR15032:SF13 7 77 4.3E-159 T 22-04-2016 APECO1_RS24365 2d698ba0618bb86f3cf22625a60bd137 354 PANTHER PTHR15032:SF13 94 354 4.3E-159 T 22-04-2016 APECO1_RS24365 2d698ba0618bb86f3cf22625a60bd137 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 5.3E-15 T 22-04-2016 APECO1_RS24365 2d698ba0618bb86f3cf22625a60bd137 354 SUPERFAMILY SSF56281 36 302 8.54E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS24365 2d698ba0618bb86f3cf22625a60bd137 354 Gene3D G3DSA:3.60.15.10 1 336 1.2E-130 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS24365 2d698ba0618bb86f3cf22625a60bd137 354 Hamap MF_01266 Probable L-ascorbate-6-phosphate lactonase UlaG [ulaG]. 1 354 99.309 T 22-04-2016 IPR023951 L-ascorbate-6-phosphate lactonase UlaG GO:0019854|GO:0030145|GO:0035460 UniPathway: UPA00263 APECO1_RS24365 2d698ba0618bb86f3cf22625a60bd137 354 PANTHER PTHR15032 7 77 4.3E-159 T 22-04-2016 APECO1_RS24365 2d698ba0618bb86f3cf22625a60bd137 354 PANTHER PTHR15032 94 354 4.3E-159 T 22-04-2016 APECO1_RS02480 a09415d8503ace9ea1c01789415f53b5 310 SUPERFAMILY SSF56601 3 309 1.19E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS02480 a09415d8503ace9ea1c01789415f53b5 310 Hamap MF_00313 Glutaminase [glsA]. 3 308 44.067 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APECO1_RS02480 a09415d8503ace9ea1c01789415f53b5 310 Pfam PF04960 Glutaminase 24 308 4.9E-106 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APECO1_RS02480 a09415d8503ace9ea1c01789415f53b5 310 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 308 1.1E-114 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APECO1_RS02480 a09415d8503ace9ea1c01789415f53b5 310 PANTHER PTHR12544 3 310 1.5E-200 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APECO1_RS02480 a09415d8503ace9ea1c01789415f53b5 310 PANTHER PTHR12544:SF31 3 310 1.5E-200 T 22-04-2016 APECO1_RS02480 a09415d8503ace9ea1c01789415f53b5 310 Gene3D G3DSA:3.40.710.10 3 309 3.1E-119 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS04495 e59286296f798f34ebca4a335b2fef6d 169 Pfam PF05926 Phage head completion protein (GPL) 31 169 2.3E-52 T 22-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 APECO1_RS02085 fd4997cdec126b74da978b9de81cec71 115 SMART SM00507 15 70 3.2E-6 T 22-04-2016 IPR003615 HNH nuclease APECO1_RS02085 fd4997cdec126b74da978b9de81cec71 115 Pfam PF01844 HNH endonuclease 27 75 6.4E-12 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 APECO1_RS10020 3677727fb049381a16204e8dbbc3db5e 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 322 54.931 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 APECO1_RS10020 3677727fb049381a16204e8dbbc3db5e 323 SUPERFAMILY SSF53335 91 323 1.04E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS10020 3677727fb049381a16204e8dbbc3db5e 323 PANTHER PTHR10108:SF847 55 322 2.7E-141 T 22-04-2016 APECO1_RS10020 3677727fb049381a16204e8dbbc3db5e 323 PANTHER PTHR10108 55 322 2.7E-141 T 22-04-2016 APECO1_RS10020 3677727fb049381a16204e8dbbc3db5e 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 8.2E-173 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like APECO1_RS10020 3677727fb049381a16204e8dbbc3db5e 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 4.7E-148 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 APECO1_RS10020 3677727fb049381a16204e8dbbc3db5e 323 Gene3D G3DSA:3.40.50.150 91 312 2.6E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 7.4E-14 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.4E-14 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 7.4E-14 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 7.4E-14 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PANTHER PTHR22912 5 367 7.8E-170 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 1.0E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 Gene3D G3DSA:3.50.50.60 4 104 7.9E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 56.302 T 22-04-2016 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 UniPathway: UPA00638 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 Gene3D G3DSA:3.50.50.60 105 300 1.7E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 7.7E-20 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 7.7E-20 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 7.7E-20 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.7E-20 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.7E-20 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 PANTHER PTHR22912:SF130 5 367 7.8E-170 T 22-04-2016 APECO1_RS15430 05ce1185b45794cb4e03613f4ca2581a 377 SUPERFAMILY SSF51905 5 301 1.23E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS02060 40741de1f32885e54d536b650d21b5ce 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.712 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02060 40741de1f32885e54d536b650d21b5ce 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 5.1E-171 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02060 40741de1f32885e54d536b650d21b5ce 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 7.3E-133 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02060 40741de1f32885e54d536b650d21b5ce 356 PANTHER PTHR30307:SF0 2 350 6.1E-190 T 22-04-2016 APECO1_RS02060 40741de1f32885e54d536b650d21b5ce 356 SUPERFAMILY SSF111337 1 343 1.57E-138 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APECO1_RS02060 40741de1f32885e54d536b650d21b5ce 356 Gene3D G3DSA:2.40.10.240 64 142 1.8E-18 T 22-04-2016 APECO1_RS02060 40741de1f32885e54d536b650d21b5ce 356 Gene3D G3DSA:3.40.1780.10 179 344 2.1E-101 T 22-04-2016 APECO1_RS02060 40741de1f32885e54d536b650d21b5ce 356 Gene3D G3DSA:3.40.1780.10 1 62 2.1E-101 T 22-04-2016 APECO1_RS02060 40741de1f32885e54d536b650d21b5ce 356 PANTHER PTHR30307 2 350 6.1E-190 T 22-04-2016 APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 TIGRFAM TIGR01933 hflK: HflK protein 97 356 8.6E-126 T 22-04-2016 IPR010201 HflK GO:0016021 APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 PANTHER PTHR10264:SF51 12 391 2.1E-207 T 22-04-2016 IPR010201 HflK GO:0016021 APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 PRINTS PR00721 Stomatin signature 149 170 9.2E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 PRINTS PR00721 Stomatin signature 184 201 9.2E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 PRINTS PR00721 Stomatin signature 102 124 9.2E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 Pfam PF12221 Bacterial membrane protein N terminal 1 59 6.2E-15 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 PANTHER PTHR10264 12 391 2.1E-207 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 SUPERFAMILY SSF117892 128 259 4.58E-21 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 SMART SM00244 95 255 1.0E-44 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS24275 5badd8e8163c9b25597924d6ffd7124d 419 Pfam PF01145 SPFH domain / Band 7 family 99 270 5.4E-32 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS27390 7a57e0482cf6c6682b8f449a8b1388b6 84 Gene3D G3DSA:3.20.20.370 2 72 5.6E-15 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS27390 7a57e0482cf6c6682b8f449a8b1388b6 84 Pfam PF01522 Polysaccharide deacetylase 24 71 8.7E-13 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS27390 7a57e0482cf6c6682b8f449a8b1388b6 84 SUPERFAMILY SSF88713 1 71 1.54E-17 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APECO1_RS27390 7a57e0482cf6c6682b8f449a8b1388b6 84 PANTHER PTHR34216 1 84 2.0E-34 T 22-04-2016 APECO1_RS27390 7a57e0482cf6c6682b8f449a8b1388b6 84 PANTHER PTHR34216:SF1 1 84 2.0E-34 T 22-04-2016 APECO1_RS20710 0f288581b2e1cf6ff7e5ac46fd8ea23b 326 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 318 1.2E-130 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 APECO1_RS20710 0f288581b2e1cf6ff7e5ac46fd8ea23b 326 Gene3D G3DSA:3.40.50.2000 1 159 1.7E-32 T 22-04-2016 APECO1_RS20710 0f288581b2e1cf6ff7e5ac46fd8ea23b 326 Gene3D G3DSA:3.40.50.2000 165 316 2.0E-36 T 22-04-2016 APECO1_RS20710 0f288581b2e1cf6ff7e5ac46fd8ea23b 326 SUPERFAMILY SSF53756 1 318 5.4E-73 T 22-04-2016 APECO1_RS20710 0f288581b2e1cf6ff7e5ac46fd8ea23b 326 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 303 4.3E-80 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APECO1_RS20710 0f288581b2e1cf6ff7e5ac46fd8ea23b 326 PANTHER PTHR30160 1 310 7.8E-176 T 22-04-2016 APECO1_RS20710 0f288581b2e1cf6ff7e5ac46fd8ea23b 326 PANTHER PTHR30160:SF8 1 310 7.8E-176 T 22-04-2016 APECO1_RS06740 c4e74a173fe057c4d260e0aa95bfd75a 348 SMART SM00507 265 314 1.1E-4 T 22-04-2016 IPR003615 HNH nuclease APECO1_RS06740 c4e74a173fe057c4d260e0aa95bfd75a 348 Pfam PF06147 Protein of unknown function (DUF968) 131 344 2.2E-77 T 22-04-2016 IPR010373 Protein of unknown function DUF968 APECO1_RS17860 935f55536b78b101cffe2040363e7c52 254 PANTHER PTHR30157:SF1 2 253 6.5E-120 T 22-04-2016 APECO1_RS17860 935f55536b78b101cffe2040363e7c52 254 SUPERFAMILY SSF63380 3 137 5.84E-16 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APECO1_RS17860 935f55536b78b101cffe2040363e7c52 254 Pfam PF08021 Siderophore-interacting FAD-binding domain 22 132 6.6E-34 T 22-04-2016 IPR013113 FAD-binding 9, siderophore-interacting APECO1_RS17860 935f55536b78b101cffe2040363e7c52 254 Gene3D G3DSA:2.40.30.10 11 131 1.6E-33 T 22-04-2016 APECO1_RS17860 935f55536b78b101cffe2040363e7c52 254 Gene3D G3DSA:3.40.50.80 135 252 3.1E-21 T 22-04-2016 APECO1_RS17860 935f55536b78b101cffe2040363e7c52 254 PANTHER PTHR30157 2 253 6.5E-120 T 22-04-2016 APECO1_RS17860 935f55536b78b101cffe2040363e7c52 254 Pfam PF04954 Siderophore-interacting protein 142 253 4.1E-21 T 22-04-2016 IPR007037 Siderophore-interacting protein APECO1_RS18335 ece98d2206feaf8affcb910411e863fe 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APECO1_RS18335 ece98d2206feaf8affcb910411e863fe 282 SUPERFAMILY SSF51717 6 274 1.44E-106 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APECO1_RS18335 ece98d2206feaf8affcb910411e863fe 282 PANTHER PTHR20941:SF1 13 277 6.3E-133 T 22-04-2016 APECO1_RS18335 ece98d2206feaf8affcb910411e863fe 282 PANTHER PTHR20941 13 277 6.3E-133 T 22-04-2016 APECO1_RS18335 ece98d2206feaf8affcb910411e863fe 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 1.0E-103 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 APECO1_RS18335 ece98d2206feaf8affcb910411e863fe 282 Gene3D G3DSA:3.20.20.20 12 274 1.8E-111 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APECO1_RS18335 ece98d2206feaf8affcb910411e863fe 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APECO1_RS18335 ece98d2206feaf8affcb910411e863fe 282 Pfam PF00809 Pterin binding enzyme 18 257 6.8E-92 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APECO1_RS19810 eb4a6c22fbf0fe11326713607ae090d7 161 PANTHER PTHR33799 3 160 2.9E-41 T 22-04-2016 APECO1_RS19810 eb4a6c22fbf0fe11326713607ae090d7 161 SUPERFAMILY SSF52728 1 159 1.57E-47 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS19810 eb4a6c22fbf0fe11326713607ae090d7 161 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 5.1E-46 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS19810 eb4a6c22fbf0fe11326713607ae090d7 161 PANTHER PTHR33799:SF5 3 160 2.9E-41 T 22-04-2016 APECO1_RS19810 eb4a6c22fbf0fe11326713607ae090d7 161 Gene3D G3DSA:3.40.35.10 1 159 6.4E-50 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APECO1_RS20720 dd7e7e1ce3a1896c600ddefc0bd5ddb6 327 SUPERFAMILY SSF53448 6 223 1.59E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS20720 dd7e7e1ce3a1896c600ddefc0bd5ddb6 327 PANTHER PTHR22916 1 242 1.1E-52 T 22-04-2016 APECO1_RS20720 dd7e7e1ce3a1896c600ddefc0bd5ddb6 327 Gene3D G3DSA:3.90.550.10 6 233 1.3E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS20720 dd7e7e1ce3a1896c600ddefc0bd5ddb6 327 Pfam PF00535 Glycosyl transferase family 2 9 157 1.2E-36 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 3 84 8.1E-45 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 Gene3D G3DSA:3.40.30.10 2 82 6.0E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 PRINTS PR00160 Glutaredoxin signature 52 65 1.1E-10 T 22-04-2016 IPR014025 Glutaredoxin subgroup APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 PRINTS PR00160 Glutaredoxin signature 66 79 1.1E-10 T 22-04-2016 IPR014025 Glutaredoxin subgroup APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 PRINTS PR00160 Glutaredoxin signature 3 21 1.1E-10 T 22-04-2016 IPR014025 Glutaredoxin subgroup APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 PANTHER PTHR10168 4 82 2.5E-41 T 22-04-2016 APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 PANTHER PTHR10168:SF85 4 82 2.5E-41 T 22-04-2016 APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 Pfam PF00462 Glutaredoxin 4 69 1.6E-17 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APECO1_RS04125 bb7ebe952da31fa2df02dea63c564220 85 SUPERFAMILY SSF52833 2 82 2.4E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS25990 8544fc51a37eb32e5edb717bafe2169a 286 PANTHER PTHR16254 1 286 5.4E-230 T 22-04-2016 APECO1_RS25990 8544fc51a37eb32e5edb717bafe2169a 286 PANTHER PTHR16254:SF28 1 286 5.4E-230 T 22-04-2016 APECO1_RS25990 8544fc51a37eb32e5edb717bafe2169a 286 Pfam PF00999 Sodium/hydrogen exchanger family 4 284 6.0E-43 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 SUPERFAMILY SSF56281 1 251 3.28E-69 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.663 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 PIRSF PIRSF005457 1 251 1.3E-90 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 Pfam PF00753 Metallo-beta-lactamase superfamily 12 165 2.3E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 3.3E-22 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 PANTHER PTHR11935 1 251 5.1E-103 T 22-04-2016 APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 3.3E-104 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 SMART SM00849 11 165 3.1E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 PANTHER PTHR11935:SF7 1 251 5.1E-103 T 22-04-2016 APECO1_RS01115 8dda996a472b09b39bfae0c079c16b2a 251 Gene3D G3DSA:3.60.15.10 5 251 1.0E-85 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS14285 1b191014a633b5c1771193980a66d6a7 384 PANTHER PTHR30544 7 382 6.6E-214 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS14285 1b191014a633b5c1771193980a66d6a7 384 Pfam PF04055 Radical SAM superfamily 120 289 2.9E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS14285 1b191014a633b5c1771193980a66d6a7 384 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 17 364 75.927 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS14285 1b191014a633b5c1771193980a66d6a7 384 PANTHER PTHR30544:SF5 7 382 6.6E-214 T 22-04-2016 APECO1_RS14285 1b191014a633b5c1771193980a66d6a7 384 PIRSF PIRSF006004 11 378 3.2E-149 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS14285 1b191014a633b5c1771193980a66d6a7 384 SUPERFAMILY SSF102114 116 326 4.84E-16 T 22-04-2016 APECO1_RS14285 1b191014a633b5c1771193980a66d6a7 384 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 13 369 2.4E-179 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS14285 1b191014a633b5c1771193980a66d6a7 384 Gene3D G3DSA:3.20.20.70 117 322 9.4E-18 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS15705 f2681ddaa5509db533ef9bd027a7a889 286 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 165 244 1.4E-16 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APECO1_RS15705 f2681ddaa5509db533ef9bd027a7a889 286 SUPERFAMILY SSF52467 164 279 1.16E-28 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS15705 f2681ddaa5509db533ef9bd027a7a889 286 Gene3D G3DSA:3.40.50.620 3 155 1.4E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS15705 f2681ddaa5509db533ef9bd027a7a889 286 SUPERFAMILY SSF52402 37 131 2.37E-8 T 22-04-2016 APECO1_RS15705 f2681ddaa5509db533ef9bd027a7a889 286 Gene3D G3DSA:3.40.50.1220 161 282 1.7E-32 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS15705 f2681ddaa5509db533ef9bd027a7a889 286 PIRSF PIRSF000089 4 286 1.6E-62 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 APECO1_RS17195 cf4ef964f6197d1a96378a1bb5d6f536 392 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 7 391 1.1E-106 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 APECO1_RS17195 cf4ef964f6197d1a96378a1bb5d6f536 392 PIRSF PIRSF015761 7 392 2.4E-27 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 APECO1_RS17195 cf4ef964f6197d1a96378a1bb5d6f536 392 Pfam PF12693 GspL periplasmic domain 234 391 1.3E-45 T 22-04-2016 IPR025691 GspL periplasmic domain APECO1_RS17195 cf4ef964f6197d1a96378a1bb5d6f536 392 SUPERFAMILY SSF53067 2 139 3.11E-26 T 22-04-2016 APECO1_RS17195 cf4ef964f6197d1a96378a1bb5d6f536 392 Pfam PF05134 Type II secretion system (T2SS), protein L 37 194 4.4E-18 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain APECO1_RS10565 302f7c03ab4691432bfc44b17d091f47 113 Pfam PF05939 Phage minor tail protein 5 111 2.3E-31 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail APECO1_RS20185 4d51c3be4aaccef78da4853411aa541b 337 PANTHER PTHR30213:SF1 23 336 5.3E-93 T 22-04-2016 APECO1_RS20185 4d51c3be4aaccef78da4853411aa541b 337 PIRSF PIRSF035875 35 329 2.9E-23 T 22-04-2016 IPR017039 Virulence factor BrkB APECO1_RS20185 4d51c3be4aaccef78da4853411aa541b 337 Pfam PF03631 Virulence factor BrkB 66 325 6.0E-52 T 22-04-2016 IPR017039 Virulence factor BrkB APECO1_RS20185 4d51c3be4aaccef78da4853411aa541b 337 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 52 326 1.4E-136 T 22-04-2016 IPR005274 Inner membrane protein YhjD APECO1_RS20185 4d51c3be4aaccef78da4853411aa541b 337 PANTHER PTHR30213 23 336 5.3E-93 T 22-04-2016 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 PANTHER PTHR30053:SF5 1 190 5.2E-133 T 22-04-2016 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 7.0E-17 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.30.30.30 1 65 7.0E-16 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50249 132 189 6.68E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 PANTHER PTHR30053 1 190 5.2E-133 T 22-04-2016 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.40.50.140 67 131 2.4E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 SMART SM01185 69 125 1.4E-13 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50249 67 130 2.27E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 Gene3D G3DSA:2.40.50.140 132 189 1.1E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 PIRSF PIRSF005901 1 190 1.4E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 6.9E-103 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 1.7E-13 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 SUPERFAMILY SSF50104 1 65 2.71E-11 T 22-04-2016 IPR008991 Translation protein SH3-like domain APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.4E-18 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 45.611 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP APECO1_RS12140 d0f6208c7ec49867d6a18499e56be373 190 SMART SM00841 133 188 1.7E-26 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APECO1_RS19260 6dec421aecff53c08f79dd15432e59cb 134 PANTHER PTHR34352 1 134 1.8E-55 T 22-04-2016 APECO1_RS19260 6dec421aecff53c08f79dd15432e59cb 134 Gene3D G3DSA:2.20.25.10 1 34 2.7E-19 T 22-04-2016 APECO1_RS19260 6dec421aecff53c08f79dd15432e59cb 134 SUPERFAMILY SSF82784 1 132 1.96E-43 T 22-04-2016 IPR003718 OsmC/Ohr family APECO1_RS19260 6dec421aecff53c08f79dd15432e59cb 134 Pfam PF02566 OsmC-like protein 30 127 2.8E-19 T 22-04-2016 IPR003718 OsmC/Ohr family APECO1_RS19260 6dec421aecff53c08f79dd15432e59cb 134 Gene3D G3DSA:3.30.300.20 35 132 2.1E-43 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APECO1_RS06625 ee7c5c3da6a6c1524cfddad9735288b9 98 PANTHER PTHR33606 1 98 1.5E-32 T 22-04-2016 APECO1_RS06625 ee7c5c3da6a6c1524cfddad9735288b9 98 Gene3D G3DSA:3.30.70.1060 2 98 1.3E-38 T 22-04-2016 APECO1_RS06625 ee7c5c3da6a6c1524cfddad9735288b9 98 SUPERFAMILY SSF54909 2 98 3.58E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS06625 ee7c5c3da6a6c1524cfddad9735288b9 98 Pfam PF03795 YCII-related domain 2 95 1.6E-29 T 22-04-2016 IPR005545 YCII-related APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 PANTHER PTHR11879 1 397 0.0 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 Gene3D G3DSA:3.40.640.10 46 316 1.5E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 PANTHER PTHR11879:SF7 1 397 0.0 T 22-04-2016 APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 Pfam PF00155 Aminotransferase class I and II 27 392 4.2E-85 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 SUPERFAMILY SSF53383 2 396 4.92E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 4.4E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 4.4E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 4.4E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS23155 86e0c3c707d0150a0ba8fc267f2cd067 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 4.4E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APECO1_RS21165 a8a802f0d44be64679e9db985d203e64 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.359 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APECO1_RS21165 a8a802f0d44be64679e9db985d203e64 85 SMART SM01234 8 75 2.7E-45 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APECO1_RS21165 a8a802f0d44be64679e9db985d203e64 85 Pfam PF01809 Haemolytic domain 10 75 1.1E-30 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APECO1_RS21165 a8a802f0d44be64679e9db985d203e64 85 PANTHER PTHR33383 1 84 5.9E-48 T 22-04-2016 APECO1_RS21165 a8a802f0d44be64679e9db985d203e64 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 4.0E-21 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APECO1_RS21165 a8a802f0d44be64679e9db985d203e64 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 6.1E-33 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor APECO1_RS27895 95aa7554c36b9c2e61060cc915066827 102 SUPERFAMILY SSF53901 4 102 1.43E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS27895 95aa7554c36b9c2e61060cc915066827 102 Pfam PF00108 Thiolase, N-terminal domain 4 102 7.8E-35 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APECO1_RS27895 95aa7554c36b9c2e61060cc915066827 102 PANTHER PTHR18919:SF88 1 102 1.7E-73 T 22-04-2016 APECO1_RS27895 95aa7554c36b9c2e61060cc915066827 102 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APECO1_RS27895 95aa7554c36b9c2e61060cc915066827 102 Gene3D G3DSA:3.40.47.10 4 102 5.2E-36 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS27895 95aa7554c36b9c2e61060cc915066827 102 PANTHER PTHR18919 1 102 1.7E-73 T 22-04-2016 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 PIRSF PIRSF000076 1 550 3.2E-241 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 Gene3D G3DSA:1.20.1270.20 159 232 4.3E-26 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 PANTHER PTHR30109 1 549 0.0 T 22-04-2016 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 Gene3D G3DSA:1.20.1270.20 1 158 6.2E-38 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 7.3E-157 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 Gene3D G3DSA:3.40.50.2030 234 379 3.9E-65 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 Gene3D G3DSA:3.40.50.2030 380 547 1.3E-68 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 SUPERFAMILY SSF56821 1 548 3.79E-190 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.654 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 3.9E-231 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APECO1_RS04250 07424baa1e799f9e61e101ce4511b513 550 PANTHER PTHR30109:SF0 1 549 0.0 T 22-04-2016 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 21 181 25.255 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 PANTHER PTHR11993 143 591 0.0 T 22-04-2016 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 46 174 6.5E-40 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 101 156 1.0E-26 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 SUPERFAMILY SSF143243 21 225 1.22E-58 T 22-04-2016 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 SUPERFAMILY SSF56762 221 596 4.45E-119 T 22-04-2016 IPR029014 NiFe hydrogenase-like APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 45 172 4.0E-45 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 207 596 41.858 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 134 155 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 325 596 5.6E-102 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 12 596 72.701 T 22-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 211 596 5.5E-178 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 Gene3D G3DSA:1.10.645.10 212 581 3.3E-46 T 22-04-2016 IPR029014 NiFe hydrogenase-like APECO1_RS12710 4de6063732c82f91881151a80fb47a9c 596 PANTHER PTHR11993:SF28 143 591 0.0 T 22-04-2016 APECO1_RS12270 c75bff5d958d3809695d48d596226a11 159 PANTHER PTHR34128 1 159 2.7E-79 T 22-04-2016 APECO1_RS12270 c75bff5d958d3809695d48d596226a11 159 Pfam PF03100 CcmE 4 137 5.3E-46 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APECO1_RS12270 c75bff5d958d3809695d48d596226a11 159 PANTHER PTHR34128:SF1 1 159 2.7E-79 T 22-04-2016 APECO1_RS12270 c75bff5d958d3809695d48d596226a11 159 Gene3D G3DSA:2.40.50.140 26 131 3.2E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS12270 c75bff5d958d3809695d48d596226a11 159 SUPERFAMILY SSF82093 30 143 4.45E-41 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APECO1_RS12270 c75bff5d958d3809695d48d596226a11 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.978 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APECO1_RS14385 93f02ec88d0585f30d6d709915c483b8 140 Pfam PF07681 DoxX 16 97 1.1E-15 T 22-04-2016 IPR032808 DoxX family APECO1_RS14385 93f02ec88d0585f30d6d709915c483b8 140 PANTHER PTHR33452:SF6 4 140 3.1E-72 T 22-04-2016 APECO1_RS14385 93f02ec88d0585f30d6d709915c483b8 140 PANTHER PTHR33452 4 140 3.1E-72 T 22-04-2016 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 PANTHER PTHR30304:SF5 1 284 6.4E-164 T 22-04-2016 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 Gene3D G3DSA:3.20.20.70 1 284 2.0E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 3.5E-161 T 22-04-2016 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 Hamap MF_01294 D-tagatose-1,6-bisphosphate aldolase subunit GatY [gatY]. 1 284 69.949 T 22-04-2016 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY GO:0009025|GO:0019404|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 PIRSF PIRSF001359 1 284 5.3E-114 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 5.0E-110 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 PANTHER PTHR30304 1 284 6.4E-164 T 22-04-2016 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 2.8E-98 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS11740 0aa767f0431a3f85c8020382860b2215 284 SUPERFAMILY SSF51569 1 284 1.13E-96 T 22-04-2016 APECO1_RS21100 bb9d585382aacfd78c2b0f0a7665e949 205 PANTHER PTHR30246 1 205 3.2E-86 T 22-04-2016 APECO1_RS21100 bb9d585382aacfd78c2b0f0a7665e949 205 Gene3D G3DSA:3.20.20.70 2 202 3.7E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS21100 bb9d585382aacfd78c2b0f0a7665e949 205 Pfam PF01081 KDPG and KHG aldolase 5 183 1.8E-29 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APECO1_RS21100 bb9d585382aacfd78c2b0f0a7665e949 205 PANTHER PTHR30246:SF1 1 205 3.2E-86 T 22-04-2016 APECO1_RS21100 bb9d585382aacfd78c2b0f0a7665e949 205 SUPERFAMILY SSF51569 2 204 3.85E-59 T 22-04-2016 APECO1_RS17975 c73ca6950ef645f2f22a23b5c138d8f4 220 PANTHER PTHR30353 1 216 2.4E-173 T 22-04-2016 IPR032818 DedA family APECO1_RS17975 c73ca6950ef645f2f22a23b5c138d8f4 220 Pfam PF09335 SNARE associated Golgi protein 48 173 7.8E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein APECO1_RS17975 c73ca6950ef645f2f22a23b5c138d8f4 220 PANTHER PTHR30353:SF11 1 216 2.4E-173 T 22-04-2016 APECO1_RS18165 33d45b0fa875971253ba6f9d545821e2 263 PANTHER PTHR32502:SF6 3 249 1.2E-157 T 22-04-2016 APECO1_RS18165 33d45b0fa875971253ba6f9d545821e2 263 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 4 263 2.1E-125 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 APECO1_RS18165 33d45b0fa875971253ba6f9d545821e2 263 PANTHER PTHR32502 3 249 1.2E-157 T 22-04-2016 APECO1_RS18165 33d45b0fa875971253ba6f9d545821e2 263 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 263 3.7E-90 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APECO1_RS04415 764fb7c983a8792d24b8c63cb626d0a9 265 ProSitePatterns PS01087 Radical activating enzymes signature. 37 58 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APECO1_RS04415 764fb7c983a8792d24b8c63cb626d0a9 265 PANTHER PTHR30352 11 265 8.6E-160 T 22-04-2016 APECO1_RS04415 764fb7c983a8792d24b8c63cb626d0a9 265 Pfam PF13353 4Fe-4S single cluster domain 35 156 7.1E-18 T 22-04-2016 APECO1_RS04415 764fb7c983a8792d24b8c63cb626d0a9 265 SUPERFAMILY SSF102114 42 235 3.34E-24 T 22-04-2016 APECO1_RS04415 764fb7c983a8792d24b8c63cb626d0a9 265 Gene3D G3DSA:3.80.30.10 88 264 4.4E-71 T 22-04-2016 APECO1_RS04415 764fb7c983a8792d24b8c63cb626d0a9 265 PANTHER PTHR30352:SF9 11 265 8.6E-160 T 22-04-2016 APECO1_RS04415 764fb7c983a8792d24b8c63cb626d0a9 265 Pfam PF04055 Radical SAM superfamily 43 197 1.7E-31 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS04415 764fb7c983a8792d24b8c63cb626d0a9 265 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 25 258 6.4E-108 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 APECO1_RS04415 764fb7c983a8792d24b8c63cb626d0a9 265 PIRSF PIRSF004869 22 265 2.5E-29 T 22-04-2016 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 SUPERFAMILY SSF52518 4 320 1.85E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 Gene3D G3DSA:3.40.50.920 538 664 2.2E-49 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 PANTHER PTHR11624:SF1 1 307 0.0 T 22-04-2016 APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 PANTHER PTHR11624:SF1 328 664 0.0 T 22-04-2016 APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 2.4E-162 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 SMART SM00861 354 525 7.8E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 PANTHER PTHR11624 1 307 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 PANTHER PTHR11624 328 664 0.0 T 22-04-2016 IPR033247 Transketolase family APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 664 3.7E-304 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 Pfam PF02780 Transketolase, C-terminal domain 540 655 1.4E-17 T 22-04-2016 IPR033248 Transketolase, C-terminal domain APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 Gene3D G3DSA:3.40.50.970 4 320 5.5E-132 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 5.6E-43 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 SUPERFAMILY SSF52922 533 664 2.22E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 Gene3D G3DSA:3.40.50.970 326 533 6.4E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS21825 47c9a7593945d2e24171caa711120c61 665 SUPERFAMILY SSF52518 335 525 2.59E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS25315 1e030530ed624d008852feb8e178751a 250 SUPERFAMILY SSF57938 146 197 5.67E-8 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS25315 1e030530ed624d008852feb8e178751a 250 Pfam PF03589 Antitermination protein 23 107 2.5E-18 T 22-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 APECO1_RS25315 1e030530ed624d008852feb8e178751a 250 Pfam PF03589 Antitermination protein 155 242 1.1E-28 T 22-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 APECO1_RS25315 1e030530ed624d008852feb8e178751a 250 Gene3D G3DSA:2.10.230.10 159 193 3.3E-4 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS25315 1e030530ed624d008852feb8e178751a 250 Gene3D G3DSA:2.10.230.10 109 158 2.4E-5 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS04790 99731f8bd86b8ea15b8892c0a4b8eecc 381 Gene3D G3DSA:3.20.20.30 3 253 5.5E-104 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS04790 99731f8bd86b8ea15b8892c0a4b8eecc 381 Gene3D G3DSA:3.20.20.30 287 350 5.5E-104 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS04790 99731f8bd86b8ea15b8892c0a4b8eecc 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 2.2E-190 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 APECO1_RS04790 99731f8bd86b8ea15b8892c0a4b8eecc 381 PANTHER PTHR30011:SF1 1 378 2.1E-219 T 22-04-2016 APECO1_RS04790 99731f8bd86b8ea15b8892c0a4b8eecc 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 70.962 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 APECO1_RS04790 99731f8bd86b8ea15b8892c0a4b8eecc 381 SUPERFAMILY SSF51679 3 349 1.3E-98 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS04790 99731f8bd86b8ea15b8892c0a4b8eecc 381 PANTHER PTHR30011 1 378 2.1E-219 T 22-04-2016 APECO1_RS04790 99731f8bd86b8ea15b8892c0a4b8eecc 381 Pfam PF00296 Luciferase-like monooxygenase 5 326 8.6E-87 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS23395 b6da15bb51eb6a45f580800a1abd9092 309 Gene3D G3DSA:3.30.420.40 2 145 4.7E-23 T 22-04-2016 APECO1_RS23395 b6da15bb51eb6a45f580800a1abd9092 309 PANTHER PTHR18964:SF10 6 304 1.1E-83 T 22-04-2016 APECO1_RS23395 b6da15bb51eb6a45f580800a1abd9092 309 SUPERFAMILY SSF53067 8 301 2.59E-45 T 22-04-2016 APECO1_RS23395 b6da15bb51eb6a45f580800a1abd9092 309 Pfam PF00480 ROK family 9 298 9.4E-95 T 22-04-2016 IPR000600 ROK family APECO1_RS23395 b6da15bb51eb6a45f580800a1abd9092 309 Hamap MF_00988 D-allose kinase [alsK]. 1 301 69.208 T 22-04-2016 IPR030883 D-allose kinase GO:0019200|GO:0019316 KEGG: 00051+2.7.1.55|UniPathway: UPA00361 APECO1_RS23395 b6da15bb51eb6a45f580800a1abd9092 309 PANTHER PTHR18964 6 304 1.1E-83 T 22-04-2016 APECO1_RS23395 b6da15bb51eb6a45f580800a1abd9092 309 Gene3D G3DSA:3.30.420.40 146 273 2.9E-33 T 22-04-2016 APECO1_RS23395 b6da15bb51eb6a45f580800a1abd9092 309 ProSitePatterns PS01125 ROK family signature. 139 166 - T 22-04-2016 IPR000600 ROK family APECO1_RS04880 ba92886b906fc1efe30673b850ec9371 209 PIRSF PIRSF028788 1 205 1.5E-54 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type APECO1_RS04880 ba92886b906fc1efe30673b850ec9371 209 Pfam PF04994 TfoX C-terminal domain 116 194 1.8E-26 T 22-04-2016 IPR007077 TfoX, C-terminal APECO1_RS04880 ba92886b906fc1efe30673b850ec9371 209 SUPERFAMILY SSF159894 13 107 1.05E-26 T 22-04-2016 APECO1_RS04880 ba92886b906fc1efe30673b850ec9371 209 Gene3D G3DSA:3.30.1460.30 5 107 2.4E-34 T 22-04-2016 IPR007076 TfoX, N-terminal APECO1_RS04880 ba92886b906fc1efe30673b850ec9371 209 Pfam PF04993 TfoX N-terminal domain 14 106 6.2E-26 T 22-04-2016 IPR007076 TfoX, N-terminal APECO1_RS04880 ba92886b906fc1efe30673b850ec9371 209 Gene3D G3DSA:1.10.150.20 117 205 3.0E-29 T 22-04-2016 APECO1_RS04880 ba92886b906fc1efe30673b850ec9371 209 PANTHER PTHR36121 2 209 1.7E-59 T 22-04-2016 APECO1_RS04880 ba92886b906fc1efe30673b850ec9371 209 PANTHER PTHR36121:SF1 2 209 1.7E-59 T 22-04-2016 APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 Gene3D G3DSA:3.40.190.10 93 179 1.3E-16 T 22-04-2016 APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 Gene3D G3DSA:1.10.10.10 5 89 2.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 SUPERFAMILY SSF53850 93 294 2.17E-43 T 22-04-2016 APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 PANTHER PTHR30427 2 300 1.6E-151 T 22-04-2016 APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 Pfam PF03466 LysR substrate binding domain 92 293 7.9E-43 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 PANTHER PTHR30427:SF1 2 300 1.6E-151 T 22-04-2016 APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 SUPERFAMILY SSF46785 4 114 2.81E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS16240 8ed5bf22ea607e28448cc92dfbf0d162 311 Gene3D G3DSA:3.40.190.10 180 262 2.4E-22 T 22-04-2016 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 SUPERFAMILY SSF52540 8 205 2.58E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 42 53 4.1E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 8 25 4.1E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 143 153 4.1E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 87 102 4.1E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 179 192 4.1E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 PRINTS PR00988 Uridine kinase signature 157 168 4.1E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 PANTHER PTHR10285 1 213 1.8E-96 T 22-04-2016 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 Gene3D G3DSA:3.40.50.300 3 205 6.3E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 9.6E-45 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 1.9E-98 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APECO1_RS11465 4ed5676e1b1bfa82b39a8a407f81fffd 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 42.04 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APECO1_RS14340 e8b7d7694ac4753e5216a53d66d207fe 107 Gene3D G3DSA:2.60.300.12 2 96 7.0E-35 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS14340 e8b7d7694ac4753e5216a53d66d207fe 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 46.634 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 APECO1_RS14340 e8b7d7694ac4753e5216a53d66d207fe 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.6E-62 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 APECO1_RS14340 e8b7d7694ac4753e5216a53d66d207fe 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APECO1_RS14340 e8b7d7694ac4753e5216a53d66d207fe 107 PANTHER PTHR10072:SF48 1 107 6.4E-51 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 APECO1_RS14340 e8b7d7694ac4753e5216a53d66d207fe 107 PANTHER PTHR10072 1 107 6.4E-51 T 22-04-2016 APECO1_RS14340 e8b7d7694ac4753e5216a53d66d207fe 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.5E-26 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS14340 e8b7d7694ac4753e5216a53d66d207fe 107 SUPERFAMILY SSF89360 1 96 1.01E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS14340 e8b7d7694ac4753e5216a53d66d207fe 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 9.9E-38 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 Pfam PF13437 HlyD family secretion protein 198 301 2.2E-9 T 22-04-2016 APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 SUPERFAMILY SSF111369 79 313 1.27E-54 T 22-04-2016 APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 Gene3D G3DSA:2.40.50.100 195 229 9.2E-24 T 22-04-2016 APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 Gene3D G3DSA:2.40.50.100 86 120 9.2E-24 T 22-04-2016 APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 390 1.2E-78 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 413 54.952 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 Pfam PF13533 Biotin-lipoyl like 87 135 1.4E-15 T 22-04-2016 APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 PANTHER PTHR30469 58 401 8.6E-217 T 22-04-2016 APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 PANTHER PTHR30469 1 38 8.6E-217 T 22-04-2016 APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 PANTHER PTHR30469:SF12 58 401 8.6E-217 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA APECO1_RS11500 c2c7b308256ceaf96ee0d598a84a1c3b 415 PANTHER PTHR30469:SF12 1 38 8.6E-217 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 Gene3D G3DSA:3.60.21.10 12 359 4.2E-97 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 PANTHER PTHR11575 1 646 0.0 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 PANTHER PTHR11575:SF6 1 646 0.0 T 22-04-2016 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 Pfam PF00149 Calcineurin-like phosphoesterase 24 259 2.9E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 22 647 0.0 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 Gene3D G3DSA:3.90.780.10 360 596 1.6E-45 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 SUPERFAMILY SSF55816 355 597 3.66E-39 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 PRINTS PR01607 Apyrase family signature 283 303 5.7E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 PRINTS PR01607 Apyrase family signature 530 549 5.7E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 PRINTS PR01607 Apyrase family signature 243 266 5.7E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 PRINTS PR01607 Apyrase family signature 22 40 5.7E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 PRINTS PR01607 Apyrase family signature 215 232 5.7E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 PRINTS PR01607 Apyrase family signature 428 451 5.7E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 Pfam PF02872 5'-nucleotidase, C-terminal domain 355 550 5.6E-25 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 SUPERFAMILY SSF56300 19 353 1.29E-85 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS24510 6580839c18263456c463a24fc36a60dd 647 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APECO1_RS03175 87c61fa7ca7706352175f1e3183d89a7 346 PANTHER PTHR30473:SF1 1 344 2.5E-213 T 22-04-2016 APECO1_RS03175 87c61fa7ca7706352175f1e3183d89a7 346 Pfam PF02562 PhoH-like protein 118 321 8.2E-96 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 APECO1_RS03175 87c61fa7ca7706352175f1e3183d89a7 346 PANTHER PTHR30473 1 344 2.5E-213 T 22-04-2016 APECO1_RS03175 87c61fa7ca7706352175f1e3183d89a7 346 SUPERFAMILY SSF52540 117 318 2.67E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03175 87c61fa7ca7706352175f1e3183d89a7 346 Gene3D G3DSA:3.40.50.300 118 321 1.2E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12475 953a383e057175bf1bc9183454c0f221 84 Gene3D G3DSA:3.10.20.30 2 83 2.3E-19 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS12475 953a383e057175bf1bc9183454c0f221 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APECO1_RS12475 953a383e057175bf1bc9183454c0f221 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 77 1.3E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS12475 953a383e057175bf1bc9183454c0f221 84 SUPERFAMILY SSF54292 3 83 1.84E-21 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 501 523 3.3E-4 T 22-04-2016 IPR010609 Gp5, C-terminal APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 SUPERFAMILY SSF69279 8 186 6.8E-47 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 SUPERFAMILY SSF69255 362 449 3.14E-32 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 SUPERFAMILY SSF69279 190 363 3.74E-45 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 Gene3D G3DSA:2.40.50.230 368 449 1.2E-39 T 22-04-2016 IPR006531 Gp5 N-terminal APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 PANTHER PTHR32305:SF11 547 625 3.2E-197 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 PANTHER PTHR32305:SF11 6 520 3.2E-197 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 PANTHER PTHR32305:SF11 649 676 3.2E-197 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 Gene3D G3DSA:3.55.50.10 97 190 1.8E-29 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 519 4.9E-181 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 501 2.2E-128 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 Pfam PF05954 Phage late control gene D protein (GPD) 34 326 2.0E-70 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 SUPERFAMILY SSF69349 545 675 7.38E-22 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 SUPERFAMILY SSF69349 440 539 7.06E-31 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 PANTHER PTHR32305 547 625 3.2E-197 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 PANTHER PTHR32305 6 520 3.2E-197 T 22-04-2016 APECO1_RS08080 76f9059294ccb88aa008a4a903b94856 801 PANTHER PTHR32305 649 676 3.2E-197 T 22-04-2016 APECO1_RS23465 34df64d0045ced8a4c3a527ea93eab4d 252 PANTHER PTHR24220:SF554 7 252 3.9E-147 T 22-04-2016 APECO1_RS23465 34df64d0045ced8a4c3a527ea93eab4d 252 Pfam PF00005 ABC transporter 22 173 1.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23465 34df64d0045ced8a4c3a527ea93eab4d 252 SMART SM00382 30 223 6.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23465 34df64d0045ced8a4c3a527ea93eab4d 252 SUPERFAMILY SSF52540 3 248 3.91E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23465 34df64d0045ced8a4c3a527ea93eab4d 252 Gene3D G3DSA:3.40.50.300 2 249 9.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23465 34df64d0045ced8a4c3a527ea93eab4d 252 PIRSF PIRSF037116 1 252 1.8E-141 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK APECO1_RS23465 34df64d0045ced8a4c3a527ea93eab4d 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS23465 34df64d0045ced8a4c3a527ea93eab4d 252 PANTHER PTHR24220 7 252 3.9E-147 T 22-04-2016 APECO1_RS23465 34df64d0045ced8a4c3a527ea93eab4d 252 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 3 250 3.4E-124 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK APECO1_RS12065 b58c85174c969f14eb28a44d31e8b17c 489 PANTHER PTHR11785 6 488 1.0E-227 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS12065 b58c85174c969f14eb28a44d31e8b17c 489 PIRSF PIRSF006060 1 488 1.6E-77 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS12065 b58c85174c969f14eb28a44d31e8b17c 489 Pfam PF00324 Amino acid permease 21 476 1.3E-147 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APECO1_RS12065 b58c85174c969f14eb28a44d31e8b17c 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APECO1_RS12065 b58c85174c969f14eb28a44d31e8b17c 489 PANTHER PTHR11785:SF204 6 488 1.0E-227 T 22-04-2016 APECO1_RS08575 3a4f4bac40f8ebeea68b56c6ff1540ea 111 Hamap MF_00546 Acid shock protein [asr]. 10 111 16.699 T 22-04-2016 IPR023497 Acid shock protein APECO1_RS17980 c35569e8f23a67f5c55632336801054c 127 Pfam PF13721 SecD export protein N-terminal TM region 17 104 3.6E-17 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain APECO1_RS17980 c35569e8f23a67f5c55632336801054c 127 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 116 29.371 T 22-04-2016 IPR026574 Modulator protein MzrA APECO1_RS01550 0c72b568186ee9ad98d674ba8b2668c0 380 PANTHER PTHR22893:SF48 1 358 1.4E-100 T 22-04-2016 APECO1_RS01550 0c72b568186ee9ad98d674ba8b2668c0 380 Gene3D G3DSA:3.20.20.70 1 347 7.3E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS01550 0c72b568186ee9ad98d674ba8b2668c0 380 PANTHER PTHR22893 1 358 1.4E-100 T 22-04-2016 APECO1_RS01550 0c72b568186ee9ad98d674ba8b2668c0 380 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 343 4.6E-77 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APECO1_RS01550 0c72b568186ee9ad98d674ba8b2668c0 380 SUPERFAMILY SSF51395 5 346 1.52E-94 T 22-04-2016 APECO1_RS16870 7ba07cc0450fc0f9ae8fb23c501ef0ab 836 PANTHER PTHR30451 1 836 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS16870 7ba07cc0450fc0f9ae8fb23c501ef0ab 836 Pfam PF13953 PapC C-terminal domain 762 817 8.6E-15 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APECO1_RS16870 7ba07cc0450fc0f9ae8fb23c501ef0ab 836 Pfam PF13954 PapC N-terminal domain 29 181 6.6E-36 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APECO1_RS16870 7ba07cc0450fc0f9ae8fb23c501ef0ab 836 SUPERFAMILY SSF141729 27 155 6.41E-27 T 22-04-2016 APECO1_RS16870 7ba07cc0450fc0f9ae8fb23c501ef0ab 836 Pfam PF00577 Outer membrane usher protein 197 750 4.0E-164 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS16870 7ba07cc0450fc0f9ae8fb23c501ef0ab 836 PANTHER PTHR30451:SF10 1 836 0.0 T 22-04-2016 APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 1.8E-33 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 Pfam PF01455 HupF/HypC family 1 71 3.2E-26 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 PANTHER PTHR35177 2 90 6.6E-67 T 22-04-2016 APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 PANTHER PTHR35177:SF1 2 90 6.6E-67 T 22-04-2016 APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 22-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 SUPERFAMILY SSF159127 1 86 1.96E-28 T 22-04-2016 APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 62 74 3.3E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 44 60 3.3E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 3.3E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS15520 7d03db32baa353bf74d064d746359a3b 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.3E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APECO1_RS15990 d0d34bacd5e5d39726e44586365746f5 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 1.9E-37 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS15990 d0d34bacd5e5d39726e44586365746f5 163 PANTHER PTHR34319 1 163 7.1E-119 T 22-04-2016 APECO1_RS15990 d0d34bacd5e5d39726e44586365746f5 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.0E-51 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS15990 d0d34bacd5e5d39726e44586365746f5 163 PANTHER PTHR34319:SF2 1 163 7.1E-119 T 22-04-2016 APECO1_RS15990 d0d34bacd5e5d39726e44586365746f5 163 Gene3D G3DSA:2.30.110.20 1 159 2.5E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS15990 d0d34bacd5e5d39726e44586365746f5 163 SUPERFAMILY SSF141452 2 160 1.96E-45 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS24245 9cf7f9b6edfb58e74d0bc21606897b16 153 SUPERFAMILY SSF52540 29 131 7.34E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24245 9cf7f9b6edfb58e74d0bc21606897b16 153 Gene3D G3DSA:3.40.50.300 4 150 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24245 9cf7f9b6edfb58e74d0bc21606897b16 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 2.5E-59 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APECO1_RS24245 9cf7f9b6edfb58e74d0bc21606897b16 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 3.9E-42 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APECO1_RS24245 9cf7f9b6edfb58e74d0bc21606897b16 153 PANTHER PTHR33540 1 152 3.7E-54 T 22-04-2016 APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 PANTHER PTHR30012:SF6 2 406 2.4E-205 T 22-04-2016 APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 1.0E-31 T 22-04-2016 IPR018076 Type II secretion system F domain APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 395 1.7E-23 T 22-04-2016 IPR018076 Type II secretion system F domain APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.0E-40 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.0E-40 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.0E-40 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.0E-40 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 405 1.9E-147 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 APECO1_RS17225 87a7706439a0ea640d8cffc9782e4a7c 407 PANTHER PTHR30012 2 406 2.4E-205 T 22-04-2016 APECO1_RS02125 a12c4a94ed276dbf21dfe5137834e88f 172 Gene3D G3DSA:1.10.3760.10 77 156 1.0E-4 T 22-04-2016 IPR027416 YutG-like domain APECO1_RS02125 a12c4a94ed276dbf21dfe5137834e88f 172 PANTHER PTHR36305 7 168 1.5E-77 T 22-04-2016 APECO1_RS02125 a12c4a94ed276dbf21dfe5137834e88f 172 SUPERFAMILY SSF101307 15 162 2.88E-48 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 APECO1_RS02125 a12c4a94ed276dbf21dfe5137834e88f 172 PIRSF PIRSF006162 11 169 1.1E-57 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APECO1_RS02125 a12c4a94ed276dbf21dfe5137834e88f 172 Pfam PF04608 Phosphatidylglycerophosphatase A 22 162 5.2E-51 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 APECO1_RS23235 791392e0eab9d20d292a86a4d3f7d035 528 SUPERFAMILY SSF141868 274 520 9.55E-78 T 22-04-2016 IPR001633 EAL domain APECO1_RS23235 791392e0eab9d20d292a86a4d3f7d035 528 PANTHER PTHR33121 42 528 1.5E-250 T 22-04-2016 APECO1_RS23235 791392e0eab9d20d292a86a4d3f7d035 528 Gene3D G3DSA:3.20.20.450 273 518 5.3E-85 T 22-04-2016 IPR001633 EAL domain APECO1_RS23235 791392e0eab9d20d292a86a4d3f7d035 528 PANTHER PTHR33121:SF16 42 528 1.5E-250 T 22-04-2016 APECO1_RS23235 791392e0eab9d20d292a86a4d3f7d035 528 Pfam PF12792 CSS motif domain associated with EAL 40 243 6.6E-40 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APECO1_RS23235 791392e0eab9d20d292a86a4d3f7d035 528 Pfam PF00563 EAL domain 273 505 1.2E-69 T 22-04-2016 IPR001633 EAL domain APECO1_RS23235 791392e0eab9d20d292a86a4d3f7d035 528 SMART SM00052 267 511 1.1E-119 T 22-04-2016 IPR001633 EAL domain APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 SUPERFAMILY SSF48310 212 699 6.28E-78 T 22-04-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 PANTHER PTHR30038 1 230 1.3E-220 T 22-04-2016 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 PANTHER PTHR30038 249 691 1.3E-220 T 22-04-2016 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 Gene3D G3DSA:3.60.9.10 3 209 4.0E-80 T 22-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 SMART SM00790 5 206 3.9E-86 T 22-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 PANTHER PTHR30038:SF0 1 230 1.3E-220 T 22-04-2016 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 PANTHER PTHR30038:SF0 249 691 1.3E-220 T 22-04-2016 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 228 685 9.8E-70 T 22-04-2016 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 Gene3D G3DSA:1.10.569.10 296 442 1.4E-5 T 22-04-2016 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 SUPERFAMILY SSF56228 3 210 8.37E-62 T 22-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 Gene3D G3DSA:1.10.599.10 443 687 2.2E-66 T 22-04-2016 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 APECO1_RS08985 b3f2ad9d02142724a08e3e54510b555a 700 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 7 205 1.0E-67 T 22-04-2016 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 SMART SM00869 734 984 2.0E-43 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 PRINTS PR01484 Pertactin virulence factor family signature 950 975 1.2E-8 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 PRINTS PR01484 Pertactin virulence factor family signature 734 754 1.2E-8 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 PRINTS PR01484 Pertactin virulence factor family signature 884 907 1.2E-8 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 PRINTS PR01484 Pertactin virulence factor family signature 975 995 1.2E-8 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 PRINTS PR01484 Pertactin virulence factor family signature 774 798 1.2E-8 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 SUPERFAMILY SSF103515 703 995 3.92E-55 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 Gene3D G3DSA:2.40.128.130 701 995 4.4E-72 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 Pfam PF03212 Pertactin 605 687 2.5E-5 T 22-04-2016 IPR004899 Pertactin, central region APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 SUPERFAMILY SSF51126 214 696 8.79E-46 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 PANTHER PTHR35037 1 995 0.0 T 22-04-2016 APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 601 995 6.3E-89 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 PANTHER PTHR35037:SF2 1 995 0.0 T 22-04-2016 APECO1_RS01900 d1ab804f33a3994ef3e56bc6e259609b 995 Pfam PF03797 Autotransporter beta-domain 733 976 5.5E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 Gene3D G3DSA:1.25.40.10 47 95 1.3E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 Gene3D G3DSA:1.25.40.10 112 236 1.2E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 Gene3D G3DSA:1.25.40.10 237 331 5.0E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 PANTHER PTHR23083 8 348 7.9E-45 T 22-04-2016 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.073 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 SUPERFAMILY SSF48452 42 134 4.84E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 SMART SM00028 141 174 470.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 SMART SM00028 180 213 32.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 SMART SM00028 107 140 390.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 SMART SM00028 214 247 0.034 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 SMART SM00028 69 102 59.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 SUPERFAMILY SSF48452 105 280 6.83E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS07100 2b9d47a6b20cfe4fbef40fae6270b9fe 389 Pfam PF14559 Tetratricopeptide repeat 191 246 1.3E-6 T 22-04-2016 APECO1_RS19605 cdf3e6b6969a48af8fd8fcfd6a92bec8 373 SUPERFAMILY SSF49401 219 373 8.95E-13 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS19605 cdf3e6b6969a48af8fd8fcfd6a92bec8 373 Gene3D G3DSA:2.60.40.1090 220 373 1.4E-10 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS19605 cdf3e6b6969a48af8fd8fcfd6a92bec8 373 Pfam PF00419 Fimbrial protein 217 373 3.0E-15 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS02430 1449633d56dd8d989f8fc5fd95c8017c 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 9.2E-77 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APECO1_RS02430 1449633d56dd8d989f8fc5fd95c8017c 558 PANTHER PTHR16254 1 551 0.0 T 22-04-2016 APECO1_RS02430 1449633d56dd8d989f8fc5fd95c8017c 558 SUPERFAMILY SSF51735 418 549 2.63E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02430 1449633d56dd8d989f8fc5fd95c8017c 558 Pfam PF02254 TrkA-N domain 421 534 3.6E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APECO1_RS02430 1449633d56dd8d989f8fc5fd95c8017c 558 Gene3D G3DSA:3.40.50.720 414 548 2.9E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS02430 1449633d56dd8d989f8fc5fd95c8017c 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 1.2E-76 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APECO1_RS02430 1449633d56dd8d989f8fc5fd95c8017c 558 PANTHER PTHR16254:SF17 1 551 0.0 T 22-04-2016 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 SUPERFAMILY SSF53738 209 317 6.59E-8 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 Gene3D G3DSA:3.40.120.10 226 316 9.4E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 2.3E-19 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 Gene3D G3DSA:3.40.120.10 30 225 1.5E-60 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 SUPERFAMILY SSF55957 433 544 5.93E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 1.4E-35 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 PANTHER PTHR22573 18 546 2.5E-294 T 22-04-2016 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 3.7E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 PANTHER PTHR22573:SF52 18 546 2.5E-294 T 22-04-2016 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 Gene3D G3DSA:3.30.310.50 466 545 9.9E-31 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 SUPERFAMILY SSF53738 305 446 2.24E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 6.2E-31 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 Gene3D G3DSA:3.40.120.10 318 441 1.0E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS03355 a159a197fc50b8a906fd94a00f032c3d 546 SUPERFAMILY SSF53738 26 235 5.65E-49 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS05405 67518bce8b401163aa75976ff1acc558 97 SUPERFAMILY SSF101498 1 89 6.93E-13 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 APECO1_RS05405 67518bce8b401163aa75976ff1acc558 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 1.9E-20 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 APECO1_RS05405 67518bce8b401163aa75976ff1acc558 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 88 1.5E-9 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.69 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 SUPERFAMILY SSF53098 3 156 1.87E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 6.1E-69 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 159 2.8E-88 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.3E-45 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.3E-45 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.3E-45 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 7.3E-45 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 7.3E-45 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 PANTHER PTHR30194 1 169 3.5E-73 T 22-04-2016 APECO1_RS09980 539598d2fa64fa2ffaa2e499b33e63ab 173 Gene3D G3DSA:3.30.420.10 3 157 1.3E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 6 477 1.5E-244 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 Gene3D G3DSA:3.90.550.10 4 279 1.8E-102 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 1.1E-74 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 PANTHER PTHR12526:SF387 360 478 3.6E-115 T 22-04-2016 APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 PANTHER PTHR12526:SF387 158 297 3.6E-115 T 22-04-2016 APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 SUPERFAMILY SSF51182 193 477 2.14E-88 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 SUPERFAMILY SSF53448 6 290 1.71E-74 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 Pfam PF00483 Nucleotidyl transferase 8 295 4.6E-80 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 Gene3D G3DSA:2.60.120.10 365 477 4.0E-47 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 PANTHER PTHR12526 360 478 3.6E-115 T 22-04-2016 APECO1_RS11370 d14ad5a0238cb9e2aab575e19183f766 478 PANTHER PTHR12526 158 297 3.6E-115 T 22-04-2016 APECO1_RS14105 ce35ae64f2cdf0665c2b1705e9aeab82 224 PANTHER PTHR41328 43 209 1.9E-13 T 22-04-2016 APECO1_RS14105 ce35ae64f2cdf0665c2b1705e9aeab82 224 Pfam PF03592 Terminase small subunit 45 200 9.8E-28 T 22-04-2016 IPR005335 Terminase small subunit GO:0006323 APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 Pfam PF13550 Putative phage tail protein 330 495 4.5E-40 T 22-04-2016 IPR032876 Tip attachment protein J APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 SUPERFAMILY SSF49265 617 717 4.87E-6 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 Pfam PF09327 Domain of unknown function (DUF1983) 873 953 7.4E-22 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 PANTHER PTHR36251 1 835 0.0 T 22-04-2016 APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 PANTHER PTHR36251 867 1134 0.0 T 22-04-2016 APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 Gene3D G3DSA:2.60.40.10 618 709 2.6E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 PANTHER PTHR36251:SF2 1 835 0.0 T 22-04-2016 APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 PANTHER PTHR36251:SF2 867 1134 0.0 T 22-04-2016 APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 SMART SM00060 714 798 43.0 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 SMART SM00060 618 701 0.07 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APECO1_RS06925 e70d32ab4fa0baffdde4dacba86ee5bf 1159 Pfam PF12421 Fibronectin type III protein 977 1118 4.8E-40 T 22-04-2016 IPR021034 Domain of unknown function, DUF3672 APECO1_RS08550 9eefe527fb744c8a25a496fb2de31ccd 393 Hamap MF_01203 Voltage-gated ClC-type chloride channel ClcB [clcB]. 4 388 37.978 T 22-04-2016 IPR023790 Chloride channel, voltage-gated, ClcB GO:0006821|GO:0010447 APECO1_RS08550 9eefe527fb744c8a25a496fb2de31ccd 393 SUPERFAMILY SSF81340 2 389 2.09E-79 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APECO1_RS08550 9eefe527fb744c8a25a496fb2de31ccd 393 Gene3D G3DSA:1.10.3080.10 2 206 4.2E-27 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APECO1_RS08550 9eefe527fb744c8a25a496fb2de31ccd 393 Gene3D G3DSA:1.10.3080.10 210 389 3.4E-35 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APECO1_RS08550 9eefe527fb744c8a25a496fb2de31ccd 393 PRINTS PR00762 Chloride channel signature 153 172 1.7E-8 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS08550 9eefe527fb744c8a25a496fb2de31ccd 393 PRINTS PR00762 Chloride channel signature 103 122 1.7E-8 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS08550 9eefe527fb744c8a25a496fb2de31ccd 393 Pfam PF00654 Voltage gated chloride channel 212 377 5.3E-35 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS08550 9eefe527fb744c8a25a496fb2de31ccd 393 Pfam PF00654 Voltage gated chloride channel 63 205 9.3E-31 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS08550 9eefe527fb744c8a25a496fb2de31ccd 393 PANTHER PTHR11689 1 388 1.1E-61 T 22-04-2016 APECO1_RS25075 b3471aa543518d2a65683c8accb7e50e 318 SUPERFAMILY SSF52540 2 201 1.32E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25075 b3471aa543518d2a65683c8accb7e50e 318 Gene3D G3DSA:3.30.1220.10 208 315 1.1E-31 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APECO1_RS25075 b3471aa543518d2a65683c8accb7e50e 318 SMART SM00833 224 317 1.3E-10 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APECO1_RS25075 b3471aa543518d2a65683c8accb7e50e 318 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 315 1.4E-18 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APECO1_RS25075 b3471aa543518d2a65683c8accb7e50e 318 SUPERFAMILY SSF90002 224 315 2.88E-25 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APECO1_RS25075 b3471aa543518d2a65683c8accb7e50e 318 PANTHER PTHR13748 1 313 4.7E-131 T 22-04-2016 APECO1_RS25075 b3471aa543518d2a65683c8accb7e50e 318 Gene3D G3DSA:3.40.50.300 2 201 1.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25075 b3471aa543518d2a65683c8accb7e50e 318 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 182 1.5E-50 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APECO1_RS25075 b3471aa543518d2a65683c8accb7e50e 318 PANTHER PTHR13748:SF43 1 313 4.7E-131 T 22-04-2016 APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:1.10.10.10 132 235 1.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00448 5 116 8.6E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 PANTHER PTHR26402 5 235 1.0E-115 T 22-04-2016 APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 PANTHER PTHR26402:SF292 5 235 1.0E-115 T 22-04-2016 APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:3.40.50.2300 4 127 1.4E-42 T 22-04-2016 APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00862 156 232 1.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS19485 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS18105 5e008c19e8a6041814e6960fabf5006a 523 Pfam PF08666 SAF domain 22 91 2.5E-13 T 22-04-2016 IPR013974 SAF domain APECO1_RS18105 5e008c19e8a6041814e6960fabf5006a 523 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 2 523 80.189 T 22-04-2016 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497|UniPathway: UPA00565 APECO1_RS18105 5e008c19e8a6041814e6960fabf5006a 523 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 15 523 2.0E-283 T 22-04-2016 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497|UniPathway: UPA00565 APECO1_RS18105 5e008c19e8a6041814e6960fabf5006a 523 SMART SM00858 22 92 5.2E-14 T 22-04-2016 IPR013974 SAF domain APECO1_RS18105 5e008c19e8a6041814e6960fabf5006a 523 PANTHER PTHR30536 2 523 0.0 T 22-04-2016 APECO1_RS18105 5e008c19e8a6041814e6960fabf5006a 523 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 119 521 2.3E-146 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 APECO1_RS18105 5e008c19e8a6041814e6960fabf5006a 523 PANTHER PTHR30536:SF1 2 523 0.0 T 22-04-2016 APECO1_RS00145 a7f5865e7be0156b27a1fba902741ee4 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.012 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APECO1_RS00145 a7f5865e7be0156b27a1fba902741ee4 316 PANTHER PTHR30426 1 316 6.0E-163 T 22-04-2016 APECO1_RS00145 a7f5865e7be0156b27a1fba902741ee4 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 8.0E-100 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APECO1_RS00145 a7f5865e7be0156b27a1fba902741ee4 316 Pfam PF02401 LytB protein 3 282 3.1E-92 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APECO1_RS01200 3269a57abaf449e7a79901434ab96ede 613 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 613 1.4E-163 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like APECO1_RS01200 3269a57abaf449e7a79901434ab96ede 613 PANTHER PTHR35370 2 613 9.9E-153 T 22-04-2016 APECO1_RS01200 3269a57abaf449e7a79901434ab96ede 613 PANTHER PTHR35370:SF4 2 613 9.9E-153 T 22-04-2016 APECO1_RS01200 3269a57abaf449e7a79901434ab96ede 613 PIRSF PIRSF028304 2 613 7.5E-176 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like APECO1_RS01200 3269a57abaf449e7a79901434ab96ede 613 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 612 9.2E-159 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like APECO1_RS09535 663100242e05f325342dd78d3f8d2fcd 294 PANTHER PTHR11122:SF14 5 294 1.8E-135 T 22-04-2016 APECO1_RS09535 663100242e05f325342dd78d3f8d2fcd 294 Pfam PF01263 Aldose 1-epimerase 27 273 3.1E-46 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APECO1_RS09535 663100242e05f325342dd78d3f8d2fcd 294 SUPERFAMILY SSF74650 8 273 8.16E-68 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS09535 663100242e05f325342dd78d3f8d2fcd 294 PANTHER PTHR11122 5 294 1.8E-135 T 22-04-2016 APECO1_RS09535 663100242e05f325342dd78d3f8d2fcd 294 PIRSF PIRSF016020 10 294 5.2E-54 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 APECO1_RS09535 663100242e05f325342dd78d3f8d2fcd 294 Gene3D G3DSA:2.70.98.10 10 291 8.2E-86 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APECO1_RS14800 e4eb76ed47c2a9e77f601fde6e0c37e5 292 Gene3D G3DSA:3.40.50.10330 1 149 7.8E-42 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APECO1_RS14800 e4eb76ed47c2a9e77f601fde6e0c37e5 292 Pfam PF01513 ATP-NAD kinase 8 271 6.9E-80 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APECO1_RS14800 e4eb76ed47c2a9e77f601fde6e0c37e5 292 PANTHER PTHR20275 5 291 3.6E-114 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APECO1_RS14800 e4eb76ed47c2a9e77f601fde6e0c37e5 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.058 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APECO1_RS14800 e4eb76ed47c2a9e77f601fde6e0c37e5 292 Gene3D G3DSA:2.60.200.30 150 261 7.9E-42 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APECO1_RS14800 e4eb76ed47c2a9e77f601fde6e0c37e5 292 SUPERFAMILY SSF111331 7 289 3.66E-92 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APECO1_RS12180 a6ffb02b119878b6eebad740a760a1c2 341 SUPERFAMILY SSF161098 135 321 2.22E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12180 a6ffb02b119878b6eebad740a760a1c2 341 Gene3D G3DSA:1.10.3720.10 134 337 3.0E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12180 a6ffb02b119878b6eebad740a760a1c2 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 46 5.3E-6 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APECO1_RS12180 a6ffb02b119878b6eebad740a760a1c2 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 4.4E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12180 a6ffb02b119878b6eebad740a760a1c2 341 PANTHER PTHR30325 1 341 2.6E-208 T 22-04-2016 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 PIRSF PIRSF000371 1 298 9.6E-92 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 PANTHER PTHR30352:SF4 100 299 2.9E-118 T 22-04-2016 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 PANTHER PTHR30352:SF4 1 54 2.9E-118 T 22-04-2016 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 Pfam PF13353 4Fe-4S single cluster domain 12 153 1.0E-9 T 22-04-2016 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 PANTHER PTHR30352 100 299 2.9E-118 T 22-04-2016 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 PANTHER PTHR30352 1 54 2.9E-118 T 22-04-2016 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 SUPERFAMILY SSF102114 105 267 1.51E-14 T 22-04-2016 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 Pfam PF04055 Radical SAM superfamily 19 229 2.0E-32 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 Gene3D G3DSA:3.80.30.10 122 297 2.7E-54 T 22-04-2016 APECO1_RS04000 9b5548d14b867e9ab704144057b17376 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 292 1.3E-110 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 5.9E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 5.9E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 5.9E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 SMART SM00422 12 80 3.7E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 Pfam PF09278 MerR, DNA binding 54 119 1.1E-15 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 PANTHER PTHR30204:SF0 4 142 5.7E-87 T 22-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 SUPERFAMILY SSF46955 12 134 5.13E-28 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 152 5.2E-75 T 22-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 Gene3D G3DSA:1.10.1660.10 10 65 6.6E-19 T 22-04-2016 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 Pfam PF00376 MerR family regulatory protein 13 49 1.4E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 PANTHER PTHR30204 4 142 5.7E-87 T 22-04-2016 APECO1_RS23245 95bf264d2f7098adb5f377ea39f2c7ac 154 Gene3D G3DSA:1.10.1660.10 66 144 7.8E-15 T 22-04-2016 APECO1_RS14950 7d994fa75fdd88994b3e120be853ba4b 136 Pfam PF05521 Phage head-tail joining protein 21 115 4.1E-16 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor APECO1_RS14950 7d994fa75fdd88994b3e120be853ba4b 136 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 20 117 1.1E-7 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 306 4.7E-19 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 Gene3D G3DSA:3.90.76.10 133 266 5.3E-23 T 22-04-2016 APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 2.4E-42 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 551 67.03 T 22-04-2016 IPR023767 Transcriptional regulator SgrR APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 PANTHER PTHR30290 119 550 2.5E-205 T 22-04-2016 APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 PANTHER PTHR30290 22 81 2.5E-205 T 22-04-2016 APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 SUPERFAMILY SSF53850 121 546 1.38E-65 T 22-04-2016 APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 Gene3D G3DSA:1.10.10.10 21 94 7.4E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 PANTHER PTHR30290:SF30 119 550 2.5E-205 T 22-04-2016 APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 PANTHER PTHR30290:SF30 22 81 2.5E-205 T 22-04-2016 APECO1_RS00385 8021469d5a709fc8e1ab1ff5239dff56 551 Gene3D G3DSA:3.40.190.10 267 308 1.2E-5 T 22-04-2016 APECO1_RS15620 db31ce91e9b9ab0b8fb4256e0a82a5aa 349 SUPERFAMILY SSF55120 2 340 6.19E-102 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS15620 db31ce91e9b9ab0b8fb4256e0a82a5aa 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 1 342 2.4E-106 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS15620 db31ce91e9b9ab0b8fb4256e0a82a5aa 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 167 3.4E-40 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS15620 db31ce91e9b9ab0b8fb4256e0a82a5aa 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 5.2E-19 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS15620 db31ce91e9b9ab0b8fb4256e0a82a5aa 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS15620 db31ce91e9b9ab0b8fb4256e0a82a5aa 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 29.023 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS15620 db31ce91e9b9ab0b8fb4256e0a82a5aa 349 PANTHER PTHR13326 1 340 1.7E-93 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS18600 1e53a06f337176a1b4bd9e96a8ebbd36 87 PANTHER PTHR34156 2 87 6.3E-56 T 22-04-2016 APECO1_RS18600 1e53a06f337176a1b4bd9e96a8ebbd36 87 Gene3D G3DSA:3.30.1660.10 18 87 1.5E-31 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS18600 1e53a06f337176a1b4bd9e96a8ebbd36 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 2.8E-22 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS18600 1e53a06f337176a1b4bd9e96a8ebbd36 87 PANTHER PTHR34156:SF5 2 87 6.3E-56 T 22-04-2016 APECO1_RS18600 1e53a06f337176a1b4bd9e96a8ebbd36 87 SUPERFAMILY SSF159871 3 87 2.75E-27 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS08805 38d08015c9b8b3b9bd450d583058ef6f 369 PANTHER PTHR30605:SF2 1 369 2.9E-281 T 22-04-2016 APECO1_RS08805 38d08015c9b8b3b9bd450d583058ef6f 369 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 367 5.5E-178 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 APECO1_RS08805 38d08015c9b8b3b9bd450d583058ef6f 369 SUPERFAMILY SSF53067 66 111 2.68E-27 T 22-04-2016 APECO1_RS08805 38d08015c9b8b3b9bd450d583058ef6f 369 SUPERFAMILY SSF53067 143 341 2.68E-27 T 22-04-2016 APECO1_RS08805 38d08015c9b8b3b9bd450d583058ef6f 369 SUPERFAMILY SSF53067 5 37 2.68E-27 T 22-04-2016 APECO1_RS08805 38d08015c9b8b3b9bd450d583058ef6f 369 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 42.394 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 APECO1_RS08805 38d08015c9b8b3b9bd450d583058ef6f 369 PANTHER PTHR30605 1 369 2.9E-281 T 22-04-2016 APECO1_RS08805 38d08015c9b8b3b9bd450d583058ef6f 369 Gene3D G3DSA:3.30.420.40 5 196 9.2E-73 T 22-04-2016 APECO1_RS09540 e7f207f4b3d8a44d6ac7a39a51c71a83 284 PANTHER PTHR11732:SF98 2 273 8.0E-123 T 22-04-2016 APECO1_RS09540 e7f207f4b3d8a44d6ac7a39a51c71a83 284 Pfam PF00248 Aldo/keto reductase family 17 271 8.0E-57 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS09540 e7f207f4b3d8a44d6ac7a39a51c71a83 284 SUPERFAMILY SSF51430 4 273 2.23E-79 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS09540 e7f207f4b3d8a44d6ac7a39a51c71a83 284 PRINTS PR00069 Aldo-keto reductase signature 97 115 3.1E-19 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS09540 e7f207f4b3d8a44d6ac7a39a51c71a83 284 PRINTS PR00069 Aldo-keto reductase signature 41 65 3.1E-19 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS09540 e7f207f4b3d8a44d6ac7a39a51c71a83 284 PRINTS PR00069 Aldo-keto reductase signature 127 144 3.1E-19 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS09540 e7f207f4b3d8a44d6ac7a39a51c71a83 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 3.1E-19 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS09540 e7f207f4b3d8a44d6ac7a39a51c71a83 284 Gene3D G3DSA:3.20.20.100 11 275 6.8E-80 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS09540 e7f207f4b3d8a44d6ac7a39a51c71a83 284 PANTHER PTHR11732 2 273 8.0E-123 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS06305 36d8114f7459929ee079c02c88580867 244 Gene3D G3DSA:2.30.110.10 14 102 1.0E-5 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS06305 36d8114f7459929ee079c02c88580867 244 Gene3D G3DSA:2.40.10.220 113 242 6.8E-42 T 22-04-2016 APECO1_RS06305 36d8114f7459929ee079c02c88580867 244 Pfam PF07238 PilZ domain 112 230 1.5E-12 T 22-04-2016 IPR009875 PilZ domain GO:0035438 APECO1_RS06305 36d8114f7459929ee079c02c88580867 244 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 3 239 29.084 T 22-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 APECO1_RS06305 36d8114f7459929ee079c02c88580867 244 Pfam PF07317 Flagellar regulator YcgR 8 109 1.1E-23 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.5E-40 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.5E-40 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.5E-40 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.5E-40 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.5E-40 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 Gene3D G3DSA:3.50.30.20 4 146 1.7E-63 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 SMART SM01097 3 133 2.9E-91 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.2E-52 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 Gene3D G3DSA:3.40.50.880 154 378 2.3E-86 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 2.0E-50 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 PANTHER PTHR11405 3 379 2.4E-258 T 22-04-2016 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.802 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 SUPERFAMILY SSF52317 153 378 1.28E-64 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 3.2E-153 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS00175 7adc9a7c3a70031335aa40a6888ebcfa 382 SUPERFAMILY SSF52021 3 143 2.09E-57 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 PIRSF PIRSF036289 1 741 1.3E-228 T 22-04-2016 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 PANTHER PTHR11051 1 733 3.8E-210 T 22-04-2016 APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 SUPERFAMILY SSF74650 6 240 8.79E-53 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 298 677 4.2E-151 T 22-04-2016 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 Gene3D G3DSA:2.60.420.10 663 732 2.4E-22 T 22-04-2016 APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 681 725 1.0E-9 T 22-04-2016 IPR005194 Glycoside hydrolase family 65, C-terminal APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 Gene3D G3DSA:1.50.10.10 294 662 6.7E-124 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 SUPERFAMILY SSF48208 250 719 3.95E-108 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 9 237 1.0E-47 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 PANTHER PTHR11051:SF8 1 733 3.8E-210 T 22-04-2016 APECO1_RS07285 f675bec97c0cc6813835ac1bc4995893 755 Gene3D G3DSA:2.70.98.40 3 241 8.5E-64 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 APECO1_RS18750 4c780231a72ff56d67ca07f7c6c92e89 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 1.3E-115 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS18750 4c780231a72ff56d67ca07f7c6c92e89 483 PANTHER PTHR11819:SF125 2 470 5.9E-294 T 22-04-2016 APECO1_RS18750 4c780231a72ff56d67ca07f7c6c92e89 483 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS18750 4c780231a72ff56d67ca07f7c6c92e89 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 1.1E-228 T 22-04-2016 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 APECO1_RS18750 4c780231a72ff56d67ca07f7c6c92e89 483 PANTHER PTHR11819 2 470 5.9E-294 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS18750 4c780231a72ff56d67ca07f7c6c92e89 483 Pfam PF00474 Sodium:solute symporter family 36 432 1.4E-142 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS18750 4c780231a72ff56d67ca07f7c6c92e89 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS23295 bc046d47d24e0c4b6b47f88aff85c6bd 188 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 36 171 1.3E-59 T 22-04-2016 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 UniPathway: UPA00045 APECO1_RS23295 bc046d47d24e0c4b6b47f88aff85c6bd 188 Gene3D G3DSA:1.10.3820.10 28 173 4.6E-16 T 22-04-2016 APECO1_RS23295 bc046d47d24e0c4b6b47f88aff85c6bd 188 PANTHER PTHR35038 1 184 2.1E-59 T 22-04-2016 APECO1_RS23295 bc046d47d24e0c4b6b47f88aff85c6bd 188 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 133 171 6.2E-5 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 APECO1_RS23295 bc046d47d24e0c4b6b47f88aff85c6bd 188 Pfam PF13435 Cytochrome c554 and c-prime 37 83 0.013 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APECO1_RS23295 bc046d47d24e0c4b6b47f88aff85c6bd 188 SUPERFAMILY SSF48695 5 169 4.95E-31 T 22-04-2016 IPR011031 Multihaem cytochrome APECO1_RS19525 71352f3b288a34245d7c296f80a17cb6 227 Pfam PF00156 Phosphoribosyl transferase domain 173 224 3.4E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APECO1_RS19525 71352f3b288a34245d7c296f80a17cb6 227 Gene3D G3DSA:3.40.50.2020 50 226 3.2E-26 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS19525 71352f3b288a34245d7c296f80a17cb6 227 SUPERFAMILY SSF53271 45 225 1.22E-37 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS19525 71352f3b288a34245d7c296f80a17cb6 227 PANTHER PTHR11907:SF9 1 227 1.7E-81 T 22-04-2016 APECO1_RS19525 71352f3b288a34245d7c296f80a17cb6 227 PANTHER PTHR11907 1 227 1.7E-81 T 22-04-2016 APECO1_RS19525 71352f3b288a34245d7c296f80a17cb6 227 TIGRFAM TIGR00201 comF: comF family protein 23 225 7.6E-82 T 22-04-2016 IPR005222 Competence protein ComF APECO1_RS22005 9062fe6cf283187c0c37942d78b3bc1c 181 SUPERFAMILY SSF52218 2 172 2.17E-30 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS22005 9062fe6cf283187c0c37942d78b3bc1c 181 Pfam PF12724 Flavodoxin domain 4 152 2.1E-53 T 22-04-2016 IPR026816 Flavodoxin domain APECO1_RS22005 9062fe6cf283187c0c37942d78b3bc1c 181 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APECO1_RS22005 9062fe6cf283187c0c37942d78b3bc1c 181 PANTHER PTHR38030 1 181 5.3E-114 T 22-04-2016 APECO1_RS22005 9062fe6cf283187c0c37942d78b3bc1c 181 PANTHER PTHR38030:SF2 1 181 5.3E-114 T 22-04-2016 APECO1_RS22005 9062fe6cf283187c0c37942d78b3bc1c 181 Gene3D G3DSA:3.40.50.360 105 175 7.9E-28 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS22005 9062fe6cf283187c0c37942d78b3bc1c 181 Gene3D G3DSA:3.40.50.360 2 73 7.9E-28 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS25640 d95d12290aaa87a91f47d25299cfb6ce 157 Pfam PF05981 CreA protein 24 155 3.3E-58 T 22-04-2016 IPR010292 Uncharacterised protein family CreA APECO1_RS25640 d95d12290aaa87a91f47d25299cfb6ce 157 PANTHER PTHR37952:SF2 1 156 6.2E-92 T 22-04-2016 APECO1_RS25640 d95d12290aaa87a91f47d25299cfb6ce 157 PIRSF PIRSF003174 1 157 9.7E-70 T 22-04-2016 IPR010292 Uncharacterised protein family CreA APECO1_RS25640 d95d12290aaa87a91f47d25299cfb6ce 157 PANTHER PTHR37952 1 156 6.2E-92 T 22-04-2016 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 Gene3D G3DSA:3.40.190.10 192 245 8.2E-12 T 22-04-2016 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 PANTHER PTHR30293 1 301 1.7E-149 T 22-04-2016 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 Gene3D G3DSA:3.40.190.10 81 191 2.4E-18 T 22-04-2016 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 PANTHER PTHR30293:SF0 1 301 1.7E-149 T 22-04-2016 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 Gene3D G3DSA:1.10.10.10 1 80 2.9E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 SUPERFAMILY SSF53850 88 295 4.16E-30 T 22-04-2016 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.9E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 SUPERFAMILY SSF46785 1 87 4.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10935 0dbb58e7c929542760efadd38bbcca6f 305 Pfam PF03466 LysR substrate binding domain 87 289 4.2E-32 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS24495 4be355ea9bbfc3acb10e26907a0d686d 321 PANTHER PTHR12715:SF21 1 320 2.4E-204 T 22-04-2016 APECO1_RS24495 4be355ea9bbfc3acb10e26907a0d686d 321 PANTHER PTHR12715 1 320 2.4E-204 T 22-04-2016 APECO1_RS24495 4be355ea9bbfc3acb10e26907a0d686d 321 SUPERFAMILY SSF103481 43 136 4.71E-9 T 22-04-2016 APECO1_RS24495 4be355ea9bbfc3acb10e26907a0d686d 321 Pfam PF00892 EamA-like transporter family 3 123 1.1E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS24495 4be355ea9bbfc3acb10e26907a0d686d 321 Pfam PF00892 EamA-like transporter family 158 306 2.6E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS24495 4be355ea9bbfc3acb10e26907a0d686d 321 SUPERFAMILY SSF103481 224 309 9.55E-7 T 22-04-2016 APECO1_RS08865 9dcebe8cd0fa98c5462287612727e109 215 PANTHER PTHR30231 1 215 3.2E-123 T 22-04-2016 APECO1_RS08865 9dcebe8cd0fa98c5462287612727e109 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 118.301 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 APECO1_RS08865 9dcebe8cd0fa98c5462287612727e109 215 SUPERFAMILY SSF53098 13 207 1.3E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS08865 9dcebe8cd0fa98c5462287612727e109 215 SMART SM00479 18 203 6.0E-42 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS08865 9dcebe8cd0fa98c5462287612727e109 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 8.6E-116 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 APECO1_RS08865 9dcebe8cd0fa98c5462287612727e109 215 Gene3D G3DSA:3.30.420.10 12 209 3.5E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS08865 9dcebe8cd0fa98c5462287612727e109 215 PANTHER PTHR30231:SF2 1 215 3.2E-123 T 22-04-2016 APECO1_RS08865 9dcebe8cd0fa98c5462287612727e109 215 Pfam PF00929 Exonuclease 20 194 3.7E-39 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Gene3D G3DSA:3.30.70.1450 303 374 6.8E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 4.7E-38 T 22-04-2016 IPR006512 YidE/YbjL duplication APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 4.6E-44 T 22-04-2016 IPR006512 YidE/YbjL duplication APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 PANTHER PTHR30445:SF4 3 558 0.0 T 22-04-2016 APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.611 T 22-04-2016 IPR023017 Transport protein YbjL, putative APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Gene3D G3DSA:3.30.70.1450 229 282 2.0E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 PANTHER PTHR30445 3 558 0.0 T 22-04-2016 APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Pfam PF06826 Predicted Permease Membrane Region 17 182 2.0E-40 T 22-04-2016 IPR006512 YidE/YbjL duplication APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Pfam PF06826 Predicted Permease Membrane Region 385 555 6.2E-43 T 22-04-2016 IPR006512 YidE/YbjL duplication APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 SUPERFAMILY SSF116726 291 374 2.09E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Pfam PF02080 TrkA-C domain 304 371 5.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 Pfam PF02080 TrkA-C domain 229 281 1.4E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS04115 9a2c4228f5bfbb5f6538863abfd0e1ab 561 SUPERFAMILY SSF116726 227 282 1.7E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APECO1_RS16770 73410235745aedc27fc4d98893dc7ec4 239 PANTHER PTHR23417 5 239 3.7E-89 T 22-04-2016 APECO1_RS16770 73410235745aedc27fc4d98893dc7ec4 239 PANTHER PTHR23417:SF14 5 239 3.7E-89 T 22-04-2016 APECO1_RS16770 73410235745aedc27fc4d98893dc7ec4 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 2.6E-75 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APECO1_RS16770 73410235745aedc27fc4d98893dc7ec4 239 Pfam PF02390 Putative methyltransferase 64 233 8.7E-62 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APECO1_RS16770 73410235745aedc27fc4d98893dc7ec4 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.418 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APECO1_RS16770 73410235745aedc27fc4d98893dc7ec4 239 Gene3D G3DSA:3.40.50.150 53 193 5.2E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS16770 73410235745aedc27fc4d98893dc7ec4 239 SUPERFAMILY SSF53335 18 237 1.92E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS09705 f0f1e15c26261a55dbed9ed91d0f4659 532 PANTHER PTHR33121:SF9 6 532 2.2E-287 T 22-04-2016 APECO1_RS09705 f0f1e15c26261a55dbed9ed91d0f4659 532 Gene3D G3DSA:3.20.20.450 271 513 2.5E-72 T 22-04-2016 IPR001633 EAL domain APECO1_RS09705 f0f1e15c26261a55dbed9ed91d0f4659 532 PANTHER PTHR33121 6 532 2.2E-287 T 22-04-2016 APECO1_RS09705 f0f1e15c26261a55dbed9ed91d0f4659 532 Pfam PF00563 EAL domain 272 501 1.5E-58 T 22-04-2016 IPR001633 EAL domain APECO1_RS09705 f0f1e15c26261a55dbed9ed91d0f4659 532 SUPERFAMILY SSF141868 272 515 2.09E-71 T 22-04-2016 IPR001633 EAL domain APECO1_RS09705 f0f1e15c26261a55dbed9ed91d0f4659 532 Pfam PF12792 CSS motif domain associated with EAL 43 239 2.5E-38 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APECO1_RS09705 f0f1e15c26261a55dbed9ed91d0f4659 532 SMART SM00052 265 506 7.2E-111 T 22-04-2016 IPR001633 EAL domain APECO1_RS05645 6eb8817f8a38b7fc1f0563fa750c23ea 303 PANTHER PTHR18964:SF134 1 303 1.1E-172 T 22-04-2016 APECO1_RS05645 6eb8817f8a38b7fc1f0563fa750c23ea 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family APECO1_RS05645 6eb8817f8a38b7fc1f0563fa750c23ea 303 Pfam PF00480 ROK family 2 300 2.7E-70 T 22-04-2016 IPR000600 ROK family APECO1_RS05645 6eb8817f8a38b7fc1f0563fa750c23ea 303 PANTHER PTHR18964 1 303 1.1E-172 T 22-04-2016 APECO1_RS05645 6eb8817f8a38b7fc1f0563fa750c23ea 303 Gene3D G3DSA:3.30.420.40 1 132 1.5E-42 T 22-04-2016 APECO1_RS05645 6eb8817f8a38b7fc1f0563fa750c23ea 303 Gene3D G3DSA:3.30.420.40 133 278 6.1E-50 T 22-04-2016 APECO1_RS05645 6eb8817f8a38b7fc1f0563fa750c23ea 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 66.794 T 22-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 APECO1_RS05645 6eb8817f8a38b7fc1f0563fa750c23ea 303 SUPERFAMILY SSF53067 1 300 2.75E-62 T 22-04-2016 APECO1_RS15185 22983af105ce88325fc502be2cc0147d 99 Pfam PF01022 Bacterial regulatory protein, arsR family 23 70 1.0E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APECO1_RS15185 22983af105ce88325fc502be2cc0147d 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 2.1E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APECO1_RS15185 22983af105ce88325fc502be2cc0147d 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 2.1E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APECO1_RS15185 22983af105ce88325fc502be2cc0147d 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 2.1E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APECO1_RS15185 22983af105ce88325fc502be2cc0147d 99 SUPERFAMILY SSF46785 11 98 2.26E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15185 22983af105ce88325fc502be2cc0147d 99 PANTHER PTHR33154 1 99 1.2E-63 T 22-04-2016 APECO1_RS15185 22983af105ce88325fc502be2cc0147d 99 Gene3D G3DSA:1.10.10.10 3 98 2.1E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15185 22983af105ce88325fc502be2cc0147d 99 SMART SM00418 16 95 1.8E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APECO1_RS15185 22983af105ce88325fc502be2cc0147d 99 PANTHER PTHR33154:SF10 1 99 1.2E-63 T 22-04-2016 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 119 674 6.5E-152 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Gene3D G3DSA:3.20.20.60 363 678 5.3E-106 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Gene3D G3DSA:3.50.30.10 239 362 1.2E-24 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 687 812 1.0E-41 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 SUPERFAMILY SSF51621 359 658 1.31E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 SUPERFAMILY SSF52009 233 349 4.19E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Gene3D G3DSA:3.30.1340.10 1 87 7.4E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Gene3D G3DSA:3.40.930.10 682 827 1.7E-41 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 PANTHER PTHR22931:SF24 162 659 0.0 T 22-04-2016 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 SUPERFAMILY SSF55804 685 826 1.44E-30 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 360 650 3.5E-107 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 687 826 3.6E-32 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 402 421 1.2E-23 T 22-04-2016 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 556 571 1.2E-23 T 22-04-2016 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 609 621 1.2E-23 T 22-04-2016 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 573 588 1.2E-23 T 22-04-2016 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 PANTHER PTHR22931 162 659 0.0 T 22-04-2016 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 SUPERFAMILY SSF55594 1 86 2.36E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 556 574 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Pfam PF05524 PEP-utilising enzyme, N-terminal 119 234 5.0E-12 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 SUPERFAMILY SSF47831 149 247 2.35E-16 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Gene3D G3DSA:1.10.274.10 151 238 7.8E-19 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Pfam PF00391 PEP-utilising enzyme, mobile domain 262 334 4.8E-14 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS13435 615ba159e5d3842c4cff3669410d6f82 831 Pfam PF00381 PTS HPr component phosphorylation site 8 83 9.8E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 Gene3D G3DSA:1.10.10.10 5 84 5.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 SUPERFAMILY SSF46785 6 113 8.33E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 PANTHER PTHR30126:SF15 3 297 5.8E-153 T 22-04-2016 APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 PANTHER PTHR30126 3 297 5.8E-153 T 22-04-2016 APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.7E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 SUPERFAMILY SSF53850 90 296 7.17E-45 T 22-04-2016 APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 Pfam PF03466 LysR substrate binding domain 89 291 4.1E-43 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 Gene3D G3DSA:3.40.190.10 180 258 1.6E-18 T 22-04-2016 APECO1_RS01095 6a8832e91352f3dab278ae25b624ebd7 304 Gene3D G3DSA:3.40.190.10 93 179 1.4E-23 T 22-04-2016 APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 Gene3D G3DSA:3.30.70.20 323 405 2.8E-16 T 22-04-2016 APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 319 7.7E-60 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 Pfam PF01180 Dihydroorotate dehydrogenase 6 304 1.2E-34 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 Gene3D G3DSA:3.20.20.70 4 319 3.6E-80 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 SUPERFAMILY SSF51395 4 320 3.66E-70 T 22-04-2016 APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 PANTHER PTHR11938 1 395 1.9E-287 T 22-04-2016 APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 Pfam PF14697 4Fe-4S dicluster domain 338 394 9.5E-17 T 22-04-2016 APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 PANTHER PTHR11938:SF102 1 395 1.9E-287 T 22-04-2016 APECO1_RS12005 7fe57fb312b8824991bea591ddee46bf 411 SUPERFAMILY SSF54862 310 400 1.91E-21 T 22-04-2016 APECO1_RS20160 b9fabbe77695ce9ec4b697d0b322ca01 466 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 - T 22-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 APECO1_RS20160 b9fabbe77695ce9ec4b697d0b322ca01 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 383 5.7E-108 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 APECO1_RS20160 b9fabbe77695ce9ec4b697d0b322ca01 466 SUPERFAMILY SSF53383 7 451 2.39E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS20160 b9fabbe77695ce9ec4b697d0b322ca01 466 Gene3D G3DSA:3.40.640.10 83 321 5.4E-23 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS20160 b9fabbe77695ce9ec4b697d0b322ca01 466 PANTHER PTHR11999 44 461 2.5E-194 T 22-04-2016 APECO1_RS20160 b9fabbe77695ce9ec4b697d0b322ca01 466 PANTHER PTHR11999:SF94 44 461 2.5E-194 T 22-04-2016 APECO1_RS20160 b9fabbe77695ce9ec4b697d0b322ca01 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 17 448 5.6E-201 T 22-04-2016 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 APECO1_RS08230 b9fabbe77695ce9ec4b697d0b322ca01 466 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 - T 22-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 APECO1_RS08230 b9fabbe77695ce9ec4b697d0b322ca01 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 383 5.7E-108 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 APECO1_RS08230 b9fabbe77695ce9ec4b697d0b322ca01 466 SUPERFAMILY SSF53383 7 451 2.39E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS08230 b9fabbe77695ce9ec4b697d0b322ca01 466 Gene3D G3DSA:3.40.640.10 83 321 5.4E-23 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS08230 b9fabbe77695ce9ec4b697d0b322ca01 466 PANTHER PTHR11999 44 461 2.5E-194 T 22-04-2016 APECO1_RS08230 b9fabbe77695ce9ec4b697d0b322ca01 466 PANTHER PTHR11999:SF94 44 461 2.5E-194 T 22-04-2016 APECO1_RS08230 b9fabbe77695ce9ec4b697d0b322ca01 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 17 448 5.6E-201 T 22-04-2016 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 APECO1_RS03110 9b9932eeddfbd4638b10e6bfd49fed9e 343 Gene3D G3DSA:3.40.50.300 1 140 4.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03110 9b9932eeddfbd4638b10e6bfd49fed9e 343 SUPERFAMILY SSF48019 212 335 2.55E-36 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APECO1_RS03110 9b9932eeddfbd4638b10e6bfd49fed9e 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 7.9E-48 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APECO1_RS03110 9b9932eeddfbd4638b10e6bfd49fed9e 343 PANTHER PTHR34388 1 342 6.1E-90 T 22-04-2016 APECO1_RS03110 9b9932eeddfbd4638b10e6bfd49fed9e 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 2.1E-107 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 APECO1_RS03110 9b9932eeddfbd4638b10e6bfd49fed9e 343 SUPERFAMILY SSF52540 1 210 2.24E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03110 9b9932eeddfbd4638b10e6bfd49fed9e 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 338 1.1E-73 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS03110 9b9932eeddfbd4638b10e6bfd49fed9e 343 Gene3D G3DSA:1.20.272.20 223 341 9.9E-53 T 22-04-2016 APECO1_RS03110 9b9932eeddfbd4638b10e6bfd49fed9e 343 Gene3D G3DSA:1.10.8.60 143 222 1.5E-38 T 22-04-2016 APECO1_RS04410 d9eed6187950a5208552e4a1d73da613 382 SUPERFAMILY SSF103473 6 376 5.89E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS04410 d9eed6187950a5208552e4a1d73da613 382 Pfam PF07690 Major Facilitator Superfamily 210 370 4.2E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS04410 d9eed6187950a5208552e4a1d73da613 382 Pfam PF07690 Major Facilitator Superfamily 12 173 2.2E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS04410 d9eed6187950a5208552e4a1d73da613 382 PANTHER PTHR23521 2 381 8.6E-236 T 22-04-2016 APECO1_RS04410 d9eed6187950a5208552e4a1d73da613 382 PANTHER PTHR23521:SF1 2 381 8.6E-236 T 22-04-2016 APECO1_RS04410 d9eed6187950a5208552e4a1d73da613 382 Gene3D G3DSA:1.20.1250.20 208 372 6.9E-17 T 22-04-2016 APECO1_RS04410 d9eed6187950a5208552e4a1d73da613 382 Gene3D G3DSA:1.20.1250.20 6 178 3.7E-20 T 22-04-2016 APECO1_RS04410 d9eed6187950a5208552e4a1d73da613 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 40.57 T 22-04-2016 IPR023745 MSF-type transporter, YcaD APECO1_RS02665 4687c28c64c10f8e62974cbd00d50e63 240 Gene3D G3DSA:3.60.21.10 173 218 1.5E-22 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS02665 4687c28c64c10f8e62974cbd00d50e63 240 Gene3D G3DSA:3.60.21.10 3 125 1.5E-22 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS02665 4687c28c64c10f8e62974cbd00d50e63 240 PANTHER PTHR34990 2 240 1.5E-137 T 22-04-2016 APECO1_RS02665 4687c28c64c10f8e62974cbd00d50e63 240 PANTHER PTHR34990:SF1 2 240 1.5E-137 T 22-04-2016 APECO1_RS02665 4687c28c64c10f8e62974cbd00d50e63 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 1.9E-117 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 APECO1_RS02665 4687c28c64c10f8e62974cbd00d50e63 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 133.517 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 APECO1_RS02665 4687c28c64c10f8e62974cbd00d50e63 240 SUPERFAMILY SSF56300 4 239 1.52E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS02665 4687c28c64c10f8e62974cbd00d50e63 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 203 1.6E-9 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APECO1_RS20795 4d43f241baa950f977b8c81a84a3ae3a 152 Gene3D G3DSA:2.70.40.10 6 151 3.0E-53 T 22-04-2016 IPR029054 dUTPase-like APECO1_RS20795 4d43f241baa950f977b8c81a84a3ae3a 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.485 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APECO1_RS20795 4d43f241baa950f977b8c81a84a3ae3a 152 PANTHER PTHR11241 1 151 3.2E-58 T 22-04-2016 APECO1_RS20795 4d43f241baa950f977b8c81a84a3ae3a 152 SUPERFAMILY SSF51283 1 151 2.22E-56 T 22-04-2016 IPR029054 dUTPase-like APECO1_RS20795 4d43f241baa950f977b8c81a84a3ae3a 152 Pfam PF00692 dUTPase 17 150 3.8E-45 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APECO1_RS20795 4d43f241baa950f977b8c81a84a3ae3a 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 151 2.4E-50 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APECO1_RS07415 7dc17f91e6f26464e1fa33425df25c25 187 PANTHER PTHR35562:SF2 1 179 5.2E-87 T 22-04-2016 APECO1_RS07415 7dc17f91e6f26464e1fa33425df25c25 187 Pfam PF01713 Smr domain 89 169 3.3E-18 T 22-04-2016 IPR002625 Smr domain APECO1_RS07415 7dc17f91e6f26464e1fa33425df25c25 187 PANTHER PTHR35562 1 179 5.2E-87 T 22-04-2016 APECO1_RS07415 7dc17f91e6f26464e1fa33425df25c25 187 SMART SM00463 85 169 2.5E-17 T 22-04-2016 IPR002625 Smr domain APECO1_RS07415 7dc17f91e6f26464e1fa33425df25c25 187 SUPERFAMILY SSF160443 86 169 6.28E-12 T 22-04-2016 IPR002625 Smr domain APECO1_RS19575 520074778e96358cf1772adade6b56c2 276 PANTHER PTHR22936:SF30 1 275 1.9E-98 T 22-04-2016 APECO1_RS19575 520074778e96358cf1772adade6b56c2 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 6.2E-29 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 APECO1_RS19575 520074778e96358cf1772adade6b56c2 276 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 276 49.529 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 APECO1_RS19575 520074778e96358cf1772adade6b56c2 276 SUPERFAMILY SSF144091 92 267 3.53E-45 T 22-04-2016 APECO1_RS19575 520074778e96358cf1772adade6b56c2 276 Gene3D G3DSA:1.20.1540.10 94 267 5.6E-39 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APECO1_RS19575 520074778e96358cf1772adade6b56c2 276 PANTHER PTHR22936 1 275 1.9E-98 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APECO1_RS19575 520074778e96358cf1772adade6b56c2 276 Pfam PF01694 Rhomboid family 131 269 5.1E-29 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APECO1_RS19575 520074778e96358cf1772adade6b56c2 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 269 1.6E-116 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 APECO1_RS21915 89f3aea0517086f53e892809582abde4 255 SMART SM00346 11 98 3.8E-18 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS21915 89f3aea0517086f53e892809582abde4 255 SUPERFAMILY SSF55781 75 247 1.77E-43 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS21915 89f3aea0517086f53e892809582abde4 255 PANTHER PTHR30136 8 247 6.4E-52 T 22-04-2016 APECO1_RS21915 89f3aea0517086f53e892809582abde4 255 Pfam PF01614 Bacterial transcriptional regulator 128 243 3.3E-21 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APECO1_RS21915 89f3aea0517086f53e892809582abde4 255 SUPERFAMILY SSF46785 12 82 2.69E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21915 89f3aea0517086f53e892809582abde4 255 Gene3D G3DSA:1.10.10.10 10 79 7.5E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21915 89f3aea0517086f53e892809582abde4 255 Gene3D G3DSA:3.30.450.40 80 248 1.3E-52 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS21915 89f3aea0517086f53e892809582abde4 255 Pfam PF09339 IclR helix-turn-helix domain 14 61 3.1E-7 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 5.2E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 PANTHER PTHR11751 104 122 5.0E-53 T 22-04-2016 APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 PANTHER PTHR11751 18 84 5.0E-53 T 22-04-2016 APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 Gene3D G3DSA:1.10.10.10 11 87 6.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 SUPERFAMILY SSF48008 106 226 2.35E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 PANTHER PTHR11751:SF408 104 122 5.0E-53 T 22-04-2016 APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 PANTHER PTHR11751:SF408 18 84 5.0E-53 T 22-04-2016 APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 SUPERFAMILY SSF46785 10 81 7.61E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.42E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.42E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 Gene3D G3DSA:1.20.120.530 104 226 2.1E-17 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 SMART SM00895 106 227 2.7E-17 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 SMART SM00345 18 77 4.8E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS21415 2e20ff485e71af411a4f625d7f020948 230 Pfam PF07729 FCD domain 108 226 1.8E-19 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 SUPERFAMILY SSF161098 261 503 1.23E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 Gene3D G3DSA:1.20.58.370 2 95 1.4E-39 T 22-04-2016 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 SUPERFAMILY SSF160964 15 260 1.57E-89 T 22-04-2016 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 501 6.0E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 Gene3D G3DSA:2.40.430.10 120 195 5.2E-39 T 22-04-2016 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 Gene3D G3DSA:1.10.3720.10 275 510 5.4E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 Gene3D G3DSA:3.10.650.10 196 269 1.0E-39 T 22-04-2016 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 PANTHER PTHR30193:SF22 37 105 1.4E-148 T 22-04-2016 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 PANTHER PTHR30193:SF22 259 511 1.4E-148 T 22-04-2016 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 PANTHER PTHR30193 37 105 1.4E-148 T 22-04-2016 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 PANTHER PTHR30193 259 511 1.4E-148 T 22-04-2016 APECO1_RS23025 3d3d0cf8fbb0b9d9ed638f5dfd867967 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 3.4E-58 T 22-04-2016 IPR029345 Maltose transport system permease protein MalF, P2 domain APECO1_RS16120 e41cf79bbd5fb69fb0007a3feff0392a 417 Pfam PF11741 AMIN domain 39 142 1.1E-26 T 22-04-2016 IPR021731 AMIN domain APECO1_RS16120 e41cf79bbd5fb69fb0007a3feff0392a 417 PANTHER PTHR30404 13 409 2.0E-140 T 22-04-2016 APECO1_RS16120 e41cf79bbd5fb69fb0007a3feff0392a 417 SUPERFAMILY SSF53187 188 284 9.73E-53 T 22-04-2016 APECO1_RS16120 e41cf79bbd5fb69fb0007a3feff0392a 417 SUPERFAMILY SSF53187 331 407 9.73E-53 T 22-04-2016 APECO1_RS16120 e41cf79bbd5fb69fb0007a3feff0392a 417 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 1.2E-50 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS16120 e41cf79bbd5fb69fb0007a3feff0392a 417 SMART SM00646 250 404 3.8E-68 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS16120 e41cf79bbd5fb69fb0007a3feff0392a 417 PANTHER PTHR30404:SF0 13 409 2.0E-140 T 22-04-2016 APECO1_RS16120 e41cf79bbd5fb69fb0007a3feff0392a 417 Gene3D G3DSA:3.40.630.40 332 407 7.0E-60 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS16120 e41cf79bbd5fb69fb0007a3feff0392a 417 Gene3D G3DSA:3.40.630.40 188 285 7.0E-60 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS12090 d7fc427ab1dd6e04138d742f57e1de16 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 299 4.7E-72 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APECO1_RS12090 d7fc427ab1dd6e04138d742f57e1de16 313 PANTHER PTHR12304:SF19 3 309 6.8E-108 T 22-04-2016 APECO1_RS12090 d7fc427ab1dd6e04138d742f57e1de16 313 PANTHER PTHR12304 3 309 6.8E-108 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase APECO1_RS12090 d7fc427ab1dd6e04138d742f57e1de16 313 Gene3D G3DSA:3.90.245.10 1 307 1.5E-106 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APECO1_RS12090 d7fc427ab1dd6e04138d742f57e1de16 313 SUPERFAMILY SSF53590 3 307 1.28E-101 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APECO1_RS12090 d7fc427ab1dd6e04138d742f57e1de16 313 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 22-04-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 APECO1_RS12090 d7fc427ab1dd6e04138d742f57e1de16 313 Hamap MF_01433 Pyrimidine-specific ribonucleoside hydrolase RihB [rihB]. 1 313 86.298 T 22-04-2016 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB GO:0046133|GO:0050263 KEGG: 00230+3.2.2.8|KEGG: 00240+3.2.2.8 APECO1_RS00540 389a5dad656b70da31de26225cbe2bab 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 19.691 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 APECO1_RS00540 389a5dad656b70da31de26225cbe2bab 65 Pfam PF03884 Domain of unknown function (DUF329) 7 56 3.6E-25 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 APECO1_RS00540 389a5dad656b70da31de26225cbe2bab 65 Gene3D G3DSA:3.30.50.10 1 62 8.2E-28 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 APECO1_RS00540 389a5dad656b70da31de26225cbe2bab 65 PANTHER PTHR36150:SF1 2 62 2.8E-28 T 22-04-2016 APECO1_RS00540 389a5dad656b70da31de26225cbe2bab 65 SUPERFAMILY SSF57716 2 62 2.14E-23 T 22-04-2016 APECO1_RS00540 389a5dad656b70da31de26225cbe2bab 65 PANTHER PTHR36150 2 62 2.8E-28 T 22-04-2016 APECO1_RS17465 08de2cb18dab95dc2d91888a23322d98 395 Gene3D G3DSA:3.90.1150.10 259 394 7.5E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS17465 08de2cb18dab95dc2d91888a23322d98 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APECO1_RS17465 08de2cb18dab95dc2d91888a23322d98 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 2.3E-170 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 APECO1_RS17465 08de2cb18dab95dc2d91888a23322d98 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 2.0E-122 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APECO1_RS17465 08de2cb18dab95dc2d91888a23322d98 395 SUPERFAMILY SSF53383 31 393 7.54E-90 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS17465 08de2cb18dab95dc2d91888a23322d98 395 Gene3D G3DSA:3.40.640.10 6 258 4.3E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS17465 08de2cb18dab95dc2d91888a23322d98 395 PIRSF PIRSF001434 1 395 3.9E-120 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APECO1_RS17465 08de2cb18dab95dc2d91888a23322d98 395 PANTHER PTHR11808 3 395 5.2E-274 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APECO1_RS17465 08de2cb18dab95dc2d91888a23322d98 395 PANTHER PTHR11808:SF45 3 395 5.2E-274 T 22-04-2016 APECO1_RS01680 157d54feb20861d3bdc823bcd3ecfc59 677 ProSitePatterns PS01303 BCCT family of transporters signature. 318 327 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS01680 157d54feb20861d3bdc823bcd3ecfc59 677 PANTHER PTHR30047 1 673 0.0 T 22-04-2016 APECO1_RS01680 157d54feb20861d3bdc823bcd3ecfc59 677 PANTHER PTHR30047:SF6 1 673 0.0 T 22-04-2016 APECO1_RS01680 157d54feb20861d3bdc823bcd3ecfc59 677 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 501 1.9E-174 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APECO1_RS01680 157d54feb20861d3bdc823bcd3ecfc59 677 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 503 3.7E-182 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 SUPERFAMILY SSF52518 369 567 2.6E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 Gene3D G3DSA:3.40.50.970 2 182 6.1E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 6.4E-34 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 328 3.6E-36 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 PANTHER PTHR18968 1 582 0.0 T 22-04-2016 APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 SUPERFAMILY SSF52467 186 376 3.66E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 4.0E-52 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 590 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 Gene3D G3DSA:3.40.50.1220 190 357 2.9E-51 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 Gene3D G3DSA:3.40.50.970 362 584 2.1E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 PANTHER PTHR18968:SF14 1 582 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 APECO1_RS02580 a42f8b217e98b4ee1e19ebc145aae1b7 593 SUPERFAMILY SSF52518 3 186 1.73E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 SUPERFAMILY SSF48208 55 547 7.99E-149 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 ProSitePatterns PS00928 Trehalase signature 2. 459 468 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 PANTHER PTHR23403 2 549 0.0 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 ProSitePatterns PS00927 Trehalase signature 1. 165 178 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 314 331 5.1E-46 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 452 468 5.1E-46 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 530 543 5.1E-46 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 346 363 5.1E-46 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 281 298 5.1E-46 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 389 405 5.1E-46 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 207 225 5.1E-46 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 Hamap MF_01059 Cytoplasmic trehalase [treF]. 34 549 80.478 T 22-04-2016 IPR023715 Trehalase, cytoplasmic GO:0004555|GO:0005737|GO:0005993|GO:0071474 KEGG: 00500+3.2.1.28|UniPathway: UPA00300 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 PANTHER PTHR23403:SF8 2 549 0.0 T 22-04-2016 APECO1_RS20170 ded60ffb072f7439bcbc06f64661d8c7 549 Pfam PF01204 Trehalase 70 546 3.1E-166 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS10325 5b9c504071f412792ceef599544014dd 183 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 39 180 3.8E-55 T 22-04-2016 IPR005247 YbhB/YbcL APECO1_RS10325 5b9c504071f412792ceef599544014dd 183 Gene3D G3DSA:3.90.280.10 21 181 7.0E-58 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APECO1_RS10325 5b9c504071f412792ceef599544014dd 183 PANTHER PTHR30289:SF0 9 183 3.3E-98 T 22-04-2016 APECO1_RS10325 5b9c504071f412792ceef599544014dd 183 SUPERFAMILY SSF49777 22 181 6.54E-54 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APECO1_RS10325 5b9c504071f412792ceef599544014dd 183 Pfam PF01161 Phosphatidylethanolamine-binding protein 44 180 1.0E-36 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APECO1_RS10325 5b9c504071f412792ceef599544014dd 183 PANTHER PTHR30289 9 183 3.3E-98 T 22-04-2016 APECO1_RS09305 da1501a2f809ffa48f318769d69989bc 116 PANTHER PTHR34382 8 115 2.6E-54 T 22-04-2016 APECO1_RS09305 da1501a2f809ffa48f318769d69989bc 116 PIRSF PIRSF000699 10 116 7.2E-41 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS09305 da1501a2f809ffa48f318769d69989bc 116 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 19 112 2.1E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS09305 da1501a2f809ffa48f318769d69989bc 116 Gene3D G3DSA:1.20.58.80 14 115 8.5E-42 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS09305 da1501a2f809ffa48f318769d69989bc 116 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 15 113 1.8E-41 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS09305 da1501a2f809ffa48f318769d69989bc 116 PANTHER PTHR34382:SF2 8 115 2.6E-54 T 22-04-2016 APECO1_RS09305 da1501a2f809ffa48f318769d69989bc 116 SUPERFAMILY SSF46973 14 113 5.62E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 34.014 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 Pfam PF01553 Acyltransferase 282 424 4.4E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 SUPERFAMILY SSF69593 245 482 3.66E-23 T 22-04-2016 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 PIRSF PIRSF000437 19 807 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 SMART SM00563 300 427 1.1E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 PANTHER PTHR12563 144 776 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 PANTHER PTHR12563 1 117 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 PANTHER PTHR12563:SF14 144 776 0.0 T 22-04-2016 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 PANTHER PTHR12563:SF14 1 117 0.0 T 22-04-2016 APECO1_RS23065 e4d26b48161240273455ecf80e7e407a 807 PIRSF PIRSF500064 2 807 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APECO1_RS23420 614b666e07e5dafa239b4d5bd422a691 311 Gene3D G3DSA:3.40.50.2300 27 150 3.6E-30 T 22-04-2016 APECO1_RS23420 614b666e07e5dafa239b4d5bd422a691 311 PANTHER PTHR32196:SF9 28 310 1.9E-84 T 22-04-2016 APECO1_RS23420 614b666e07e5dafa239b4d5bd422a691 311 PANTHER PTHR32196 28 310 1.9E-84 T 22-04-2016 APECO1_RS23420 614b666e07e5dafa239b4d5bd422a691 311 Pfam PF13407 Periplasmic binding protein domain 28 288 9.4E-59 T 22-04-2016 IPR025997 Periplasmic binding protein APECO1_RS23420 614b666e07e5dafa239b4d5bd422a691 311 SUPERFAMILY SSF53822 28 310 1.85E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS23420 614b666e07e5dafa239b4d5bd422a691 311 Gene3D G3DSA:3.40.50.2300 151 311 1.1E-47 T 22-04-2016 APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 Gene3D G3DSA:1.10.10.10 11 90 1.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.0E-4 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.0E-4 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.0E-4 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 Gene3D G3DSA:3.40.190.10 98 182 5.1E-18 T 22-04-2016 APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 Pfam PF03466 LysR substrate binding domain 94 301 1.2E-31 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 Gene3D G3DSA:3.40.190.10 183 271 9.8E-18 T 22-04-2016 APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 2.0E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 SUPERFAMILY SSF46785 11 117 3.59E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 SUPERFAMILY SSF53850 94 302 5.74E-34 T 22-04-2016 APECO1_RS01560 93f9d5380dfea49775b891b582b71876 308 PANTHER PTHR30537 1 302 6.4E-94 T 22-04-2016 APECO1_RS04180 fb0834a8ddb9f8192034915e06a2e8b5 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 80.033 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 APECO1_RS04180 fb0834a8ddb9f8192034915e06a2e8b5 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 374 1.9E-16 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APECO1_RS04180 fb0834a8ddb9f8192034915e06a2e8b5 375 PANTHER PTHR11061:SF36 8 375 8.6E-262 T 22-04-2016 APECO1_RS04180 fb0834a8ddb9f8192034915e06a2e8b5 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 6.5E-222 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 APECO1_RS04180 fb0834a8ddb9f8192034915e06a2e8b5 375 PANTHER PTHR11061 8 375 8.6E-262 T 22-04-2016 APECO1_RS04180 fb0834a8ddb9f8192034915e06a2e8b5 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site APECO1_RS04180 fb0834a8ddb9f8192034915e06a2e8b5 375 Gene3D G3DSA:3.40.50.150 180 373 1.0E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04180 fb0834a8ddb9f8192034915e06a2e8b5 375 SUPERFAMILY SSF53335 3 374 9.46E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04180 fb0834a8ddb9f8192034915e06a2e8b5 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APECO1_RS18350 6430a14f5b78b1e75288bbc6f448e0c5 97 SMART SM01103 3 86 4.3E-40 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APECO1_RS18350 6430a14f5b78b1e75288bbc6f448e0c5 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.7E-22 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APECO1_RS18350 6430a14f5b78b1e75288bbc6f448e0c5 97 PANTHER PTHR31846 1 97 1.8E-44 T 22-04-2016 APECO1_RS18350 6430a14f5b78b1e75288bbc6f448e0c5 97 SUPERFAMILY SSF75471 1 95 5.89E-31 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APECO1_RS18350 6430a14f5b78b1e75288bbc6f448e0c5 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 2.0E-44 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APECO1_RS18350 6430a14f5b78b1e75288bbc6f448e0c5 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 7.6E-44 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 APECO1_RS18350 6430a14f5b78b1e75288bbc6f448e0c5 97 Gene3D G3DSA:3.30.110.60 1 94 3.2E-34 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 SUPERFAMILY SSF56601 23 473 8.17E-100 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 PANTHER PTHR30023 23 473 2.0E-144 T 22-04-2016 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 4.4E-177 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 PANTHER PTHR30023:SF0 23 473 2.0E-144 T 22-04-2016 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 46 447 3.2E-185 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 2.4E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 2.4E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 2.4E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 2.4E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 2.4E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APECO1_RS18360 faf195686f4ae260064f6eb4e11127af 477 Gene3D G3DSA:3.40.710.10 227 455 1.4E-66 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 PANTHER PTHR11014:SF116 5 403 2.4E-251 T 22-04-2016 APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 PANTHER PTHR11014 5 403 2.4E-251 T 22-04-2016 APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 SUPERFAMILY SSF55031 186 282 1.94E-12 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 Pfam PF01546 Peptidase family M20/M25/M40 78 395 6.2E-24 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 Gene3D G3DSA:3.30.70.360 193 282 7.5E-14 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 SUPERFAMILY SSF53187 10 185 7.29E-54 T 22-04-2016 APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 SUPERFAMILY SSF53187 316 399 7.29E-54 T 22-04-2016 APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 Gene3D G3DSA:3.40.630.10 311 395 1.4E-54 T 22-04-2016 APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 Gene3D G3DSA:3.40.630.10 14 192 1.4E-54 T 22-04-2016 APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 8 400 1.6E-217 T 22-04-2016 IPR017706 Peptidase M20/DapE, YgeY APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 Pfam PF07687 Peptidase dimerisation domain 183 282 1.6E-16 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APECO1_RS16315 8b2780964314a684d72024f650db1fb8 403 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 SUPERFAMILY SSF54523 6 96 4.39E-10 T 22-04-2016 APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 22 7.1E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 Gene3D G3DSA:3.55.40.10 37 186 7.3E-43 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 2.1E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 PRINTS PR00885 Bacterial general secretion pathway protein H signature 1 15 4.8E-11 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 PRINTS PR00885 Bacterial general secretion pathway protein H signature 16 30 4.8E-11 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 PRINTS PR00885 Bacterial general secretion pathway protein H signature 141 156 4.8E-11 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 Pfam PF12019 Type II transport protein GspH 40 175 8.8E-10 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 177 1.6E-14 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APECO1_RS17215 ab809ce8ec1cc1b0b1b848462994193c 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS08420 03eb833fcd525f70a00dc355dc14e131 440 PIRSF PIRSF006351 4 440 5.9E-137 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APECO1_RS08420 03eb833fcd525f70a00dc355dc14e131 440 PANTHER PTHR33989:SF4 3 435 2.6E-175 T 22-04-2016 APECO1_RS08420 03eb833fcd525f70a00dc355dc14e131 440 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 15 436 3.9E-100 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 APECO1_RS08420 03eb833fcd525f70a00dc355dc14e131 440 Pfam PF02378 Phosphotransferase system, EIIC 32 365 7.5E-46 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS08420 03eb833fcd525f70a00dc355dc14e131 440 PANTHER PTHR33989 3 435 2.6E-175 T 22-04-2016 APECO1_RS23780 581e04cc2b791282d3d04702740b3189 123 SUPERFAMILY SSF46689 10 84 8.72E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23780 581e04cc2b791282d3d04702740b3189 123 PANTHER PTHR30328:SF26 1 71 3.1E-18 T 22-04-2016 APECO1_RS23780 581e04cc2b791282d3d04702740b3189 123 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 2.2E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS23780 581e04cc2b791282d3d04702740b3189 123 Gene3D G3DSA:1.10.357.10 16 102 2.1E-22 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS23780 581e04cc2b791282d3d04702740b3189 123 PANTHER PTHR30328 1 71 3.1E-18 T 22-04-2016 APECO1_RS23780 581e04cc2b791282d3d04702740b3189 123 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.5E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS23780 581e04cc2b791282d3d04702740b3189 123 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.5E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS05575 c65ae3b77f5a90c598beb8fb073593d0 213 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 6 212 2.9E-65 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB APECO1_RS05575 c65ae3b77f5a90c598beb8fb073593d0 213 PANTHER PTHR40593 2 213 1.3E-103 T 22-04-2016 APECO1_RS05575 c65ae3b77f5a90c598beb8fb073593d0 213 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 4 211 35.098 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB APECO1_RS05575 c65ae3b77f5a90c598beb8fb073593d0 213 Pfam PF13036 Peptidoglycan-synthase activator LpoB 10 210 8.1E-56 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB APECO1_RS02295 bb7455a2e6b62d83c27a5214e0905ff9 428 SUPERFAMILY SSF111352 27 407 3.66E-128 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APECO1_RS02295 bb7455a2e6b62d83c27a5214e0905ff9 428 Gene3D G3DSA:1.10.3430.10 26 407 1.9E-140 T 22-04-2016 IPR029020 Ammonium/urea transporter APECO1_RS02295 bb7455a2e6b62d83c27a5214e0905ff9 428 Pfam PF00909 Ammonium Transporter Family 33 426 1.1E-131 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APECO1_RS02295 bb7455a2e6b62d83c27a5214e0905ff9 428 PANTHER PTHR11730 3 427 3.0E-193 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APECO1_RS02295 bb7455a2e6b62d83c27a5214e0905ff9 428 PANTHER PTHR11730:SF17 3 427 3.0E-193 T 22-04-2016 APECO1_RS02295 bb7455a2e6b62d83c27a5214e0905ff9 428 ProSitePatterns PS01219 Ammonium transporters signature. 182 207 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 APECO1_RS02295 bb7455a2e6b62d83c27a5214e0905ff9 428 TIGRFAM TIGR00836 amt: ammonium transporter 31 426 8.5E-140 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 Pfam PF08753 NikR C terminal nickel binding domain 54 127 1.2E-27 T 22-04-2016 IPR014864 Transcription factor, NikR, nickel binding C-terminal APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 PANTHER PTHR34719 1 133 2.2E-58 T 22-04-2016 APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 1 131 27.936 T 22-04-2016 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 Gene3D G3DSA:1.10.1220.10 1 46 1.1E-23 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 SUPERFAMILY SSF47598 1 45 3.6E-12 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 PANTHER PTHR34719:SF2 1 133 2.2E-58 T 22-04-2016 APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 SUPERFAMILY SSF55021 53 132 2.52E-26 T 22-04-2016 APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 Gene3D G3DSA:3.30.70.1150 50 132 7.0E-34 T 22-04-2016 APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 TIGRFAM TIGR02793 nikR: nickel-responsive transcriptional regulator NikR 2 130 8.0E-68 T 22-04-2016 IPR014160 Nickel-responsive transcriptional regulator NikR, proteobacteria GO:0010045|GO:0016151 APECO1_RS19935 6d977bb96b25187abc5348661bf9f009 133 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 42 1.5E-11 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 APECO1_RS10960 5d88ea27e95c24e146db18b083197392 181 PANTHER PTHR34848 1 181 1.5E-77 T 22-04-2016 APECO1_RS10960 5d88ea27e95c24e146db18b083197392 181 PIRSF PIRSF006135 1 181 1.1E-65 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 APECO1_RS10960 5d88ea27e95c24e146db18b083197392 181 Gene3D G3DSA:3.40.50.300 2 181 4.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10960 5d88ea27e95c24e146db18b083197392 181 SUPERFAMILY SSF52540 2 181 3.17E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10960 5d88ea27e95c24e146db18b083197392 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 180 2.5E-64 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 APECO1_RS07260 2af07734cfc755919013ce06283c0f13 293 PANTHER PTHR30193 1 293 4.1E-141 T 22-04-2016 APECO1_RS07260 2af07734cfc755919013ce06283c0f13 293 PANTHER PTHR30193:SF22 1 293 4.1E-141 T 22-04-2016 APECO1_RS07260 2af07734cfc755919013ce06283c0f13 293 Gene3D G3DSA:1.10.3720.10 12 284 1.8E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07260 2af07734cfc755919013ce06283c0f13 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 282 9.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07260 2af07734cfc755919013ce06283c0f13 293 SUPERFAMILY SSF161098 58 282 3.53E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS06005 b373470347b6c114a5e0be386690f9c2 117 SUPERFAMILY SSF69279 1 117 5.19E-53 T 22-04-2016 APECO1_RS06005 b373470347b6c114a5e0be386690f9c2 117 Gene3D G3DSA:2.40.10.180 1 116 4.2E-47 T 22-04-2016 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 APECO1_RS06005 b373470347b6c114a5e0be386690f9c2 117 ProDom PD031229 PROPHAGE HEAD-TAIL JOINING CAPSID TAIL ATTACHMENT MINOR GIFSY-1 FII CP-933X 1 117 2.0E-63 T 22-04-2016 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 APECO1_RS06005 b373470347b6c114a5e0be386690f9c2 117 Pfam PF05354 Phage Head-Tail Attachment 1 117 2.9E-50 T 22-04-2016 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 SMART SM01007 11 239 2.0E-32 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 4.6E-35 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 Gene3D G3DSA:3.40.225.10 1 271 1.6E-110 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 PANTHER PTHR22789:SF4 68 272 3.4E-137 T 22-04-2016 APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 PANTHER PTHR22789:SF4 1 39 3.4E-137 T 22-04-2016 APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 SUPERFAMILY SSF53639 1 271 8.44E-79 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 58.022 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 1.8E-141 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 PANTHER PTHR22789 68 272 3.4E-137 T 22-04-2016 APECO1_RS22265 4f684ec4aa88b7b6ab8e25277387a4fc 274 PANTHER PTHR22789 1 39 3.4E-137 T 22-04-2016 APECO1_RS20390 f482944325ae85c7e9a4624ec771d036 96 Pfam PF01381 Helix-turn-helix 38 80 1.4E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS20390 f482944325ae85c7e9a4624ec771d036 96 PANTHER PTHR36511:SF1 1 95 1.6E-75 T 22-04-2016 APECO1_RS20390 f482944325ae85c7e9a4624ec771d036 96 PANTHER PTHR36511 1 95 1.6E-75 T 22-04-2016 APECO1_RS20390 f482944325ae85c7e9a4624ec771d036 96 Gene3D G3DSA:1.10.260.40 37 88 1.0E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS20390 f482944325ae85c7e9a4624ec771d036 96 SMART SM00530 37 91 9.5E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS20390 f482944325ae85c7e9a4624ec771d036 96 SUPERFAMILY SSF47413 38 82 3.22E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS20540 d4319c327013241cc080b2ae0ccd2267 231 PANTHER PTHR22789:SF7 1 231 2.0E-177 T 22-04-2016 APECO1_RS20540 d4319c327013241cc080b2ae0ccd2267 231 Gene3D G3DSA:3.40.225.10 2 231 3.6E-73 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS20540 d4319c327013241cc080b2ae0ccd2267 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.4E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS20540 d4319c327013241cc080b2ae0ccd2267 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 3.4E-133 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 APECO1_RS20540 d4319c327013241cc080b2ae0ccd2267 231 SUPERFAMILY SSF53639 1 223 6.67E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS20540 d4319c327013241cc080b2ae0ccd2267 231 PANTHER PTHR22789 1 231 2.0E-177 T 22-04-2016 APECO1_RS20540 d4319c327013241cc080b2ae0ccd2267 231 SMART SM01007 7 198 3.9E-68 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS09395 6b841dc63a85b1712d9b741e99192e40 182 Pfam PF02627 Carboxymuconolactone decarboxylase family 52 122 1.1E-7 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APECO1_RS09395 6b841dc63a85b1712d9b741e99192e40 182 Gene3D G3DSA:1.20.1290.10 30 175 1.3E-38 T 22-04-2016 IPR029032 AhpD-like APECO1_RS09395 6b841dc63a85b1712d9b741e99192e40 182 SUPERFAMILY SSF69118 3 173 3.6E-37 T 22-04-2016 IPR029032 AhpD-like APECO1_RS21480 71eced518cd34052160c7d97a9de63ca 309 Gene3D G3DSA:3.20.10.10 135 295 3.8E-58 T 22-04-2016 APECO1_RS21480 71eced518cd34052160c7d97a9de63ca 309 SUPERFAMILY SSF56752 7 308 1.57E-105 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APECO1_RS21480 71eced518cd34052160c7d97a9de63ca 309 Pfam PF01063 Amino-transferase class IV 36 268 5.2E-51 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APECO1_RS21480 71eced518cd34052160c7d97a9de63ca 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 4.8E-148 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 APECO1_RS21480 71eced518cd34052160c7d97a9de63ca 309 PANTHER PTHR11825 1 306 5.2E-136 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APECO1_RS21480 71eced518cd34052160c7d97a9de63ca 309 PANTHER PTHR11825:SF7 1 306 5.2E-136 T 22-04-2016 APECO1_RS21480 71eced518cd34052160c7d97a9de63ca 309 Gene3D G3DSA:3.30.470.10 7 130 1.6E-43 T 22-04-2016 APECO1_RS21480 71eced518cd34052160c7d97a9de63ca 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 APECO1_RS06530 279d2a2a4befe45abf4071ff8f4f3038 152 SUPERFAMILY SSF54427 25 129 1.48E-37 T 22-04-2016 IPR032710 NTF2-like domain APECO1_RS06530 279d2a2a4befe45abf4071ff8f4f3038 152 PANTHER PTHR33747 2 152 4.5E-38 T 22-04-2016 APECO1_RS06530 279d2a2a4befe45abf4071ff8f4f3038 152 SUPERFAMILY SSF103642 132 151 4.41E-8 T 22-04-2016 APECO1_RS06530 279d2a2a4befe45abf4071ff8f4f3038 152 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 128 30.23 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 APECO1_RS06530 279d2a2a4befe45abf4071ff8f4f3038 152 Gene3D G3DSA:3.10.450.50 2 152 2.9E-56 T 22-04-2016 IPR032710 NTF2-like domain APECO1_RS06530 279d2a2a4befe45abf4071ff8f4f3038 152 Pfam PF02810 SEC-C motif 134 152 6.2E-11 T 22-04-2016 IPR004027 SEC-C motif APECO1_RS06530 279d2a2a4befe45abf4071ff8f4f3038 152 Pfam PF02810 SEC-C motif 3 19 1.2E-4 T 22-04-2016 IPR004027 SEC-C motif APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 Gene3D G3DSA:3.20.20.70 11 355 4.2E-124 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 6.1E-194 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 PANTHER PTHR30559 2 359 2.4E-248 T 22-04-2016 APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 PANTHER PTHR30559:SF0 2 359 2.4E-248 T 22-04-2016 APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 PIRSF PIRSF001359 13 359 2.4E-108 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 3.0E-118 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 SUPERFAMILY SSF51569 4 357 3.3E-132 T 22-04-2016 APECO1_RS16560 681647fea47f11e2a1bc781cc7b1db41 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 7.2E-89 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS12515 b3763dca922cd450717649372df0c7cc 61 PANTHER PTHR34611 1 61 2.4E-30 T 22-04-2016 APECO1_RS12515 b3763dca922cd450717649372df0c7cc 61 PANTHER PTHR34611:SF1 1 61 2.4E-30 T 22-04-2016 APECO1_RS15715 f1b786e1b2ecbefbf6e4c9de354d16a2 405 PANTHER PTHR23511:SF10 6 405 9.5E-287 T 22-04-2016 APECO1_RS15715 f1b786e1b2ecbefbf6e4c9de354d16a2 405 SUPERFAMILY SSF103473 8 404 1.44E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS15715 f1b786e1b2ecbefbf6e4c9de354d16a2 405 Gene3D G3DSA:1.20.1250.20 22 201 1.3E-26 T 22-04-2016 APECO1_RS15715 f1b786e1b2ecbefbf6e4c9de354d16a2 405 PANTHER PTHR23511 6 405 9.5E-287 T 22-04-2016 APECO1_RS15715 f1b786e1b2ecbefbf6e4c9de354d16a2 405 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS15715 f1b786e1b2ecbefbf6e4c9de354d16a2 405 Pfam PF00083 Sugar (and other) transporter 29 396 9.3E-46 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS15715 f1b786e1b2ecbefbf6e4c9de354d16a2 405 Gene3D G3DSA:1.20.1250.20 246 404 8.5E-11 T 22-04-2016 APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.4E-58 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 SUPERFAMILY SSF48179 349 484 2.89E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 SUPERFAMILY SSF51735 30 209 6.06E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 Gene3D G3DSA:1.10.1040.10 361 481 6.1E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 Gene3D G3DSA:3.40.50.720 1 201 3.0E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 485 38.86 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 357 482 1.3E-21 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 1.4E-28 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 1.1E-137 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS21500 efb0fe49894d94e2cfcc72b50e818cfc 491 SUPERFAMILY SSF48179 210 369 6.8E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS00140 9b645bb4da5c24a326dc2063b5c3faf4 149 PANTHER PTHR10516 133 146 9.5E-29 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APECO1_RS00140 9b645bb4da5c24a326dc2063b5c3faf4 149 PANTHER PTHR10516 1 77 9.5E-29 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APECO1_RS00140 9b645bb4da5c24a326dc2063b5c3faf4 149 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 2.2E-15 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APECO1_RS00140 9b645bb4da5c24a326dc2063b5c3faf4 149 Gene3D G3DSA:3.10.50.40 130 145 4.7E-20 T 22-04-2016 APECO1_RS00140 9b645bb4da5c24a326dc2063b5c3faf4 149 Gene3D G3DSA:3.10.50.40 3 80 4.7E-20 T 22-04-2016 APECO1_RS00140 9b645bb4da5c24a326dc2063b5c3faf4 149 SUPERFAMILY SSF54534 5 143 7.66E-37 T 22-04-2016 APECO1_RS00140 9b645bb4da5c24a326dc2063b5c3faf4 149 PANTHER PTHR10516:SF329 133 146 9.5E-29 T 22-04-2016 APECO1_RS00140 9b645bb4da5c24a326dc2063b5c3faf4 149 PANTHER PTHR10516:SF329 1 77 9.5E-29 T 22-04-2016 APECO1_RS11145 fd630ad54cb3c191efa332f02f1ebd06 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 2.5E-51 T 22-04-2016 IPR009320 YagB/YeeU/YfjZ APECO1_RS11145 fd630ad54cb3c191efa332f02f1ebd06 122 Gene3D G3DSA:3.30.450.20 27 119 1.2E-58 T 22-04-2016 APECO1_RS11145 fd630ad54cb3c191efa332f02f1ebd06 122 SUPERFAMILY SSF143737 8 118 6.54E-55 T 22-04-2016 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 PANTHER PTHR11373:SF29 182 285 1.5E-94 T 22-04-2016 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 PANTHER PTHR11373:SF29 20 142 1.5E-94 T 22-04-2016 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 Gene3D G3DSA:1.10.3550.10 391 503 1.1E-32 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 Gene3D G3DSA:1.10.3550.10 123 158 1.1E-32 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 Gene3D G3DSA:1.10.3410.10 269 390 4.6E-34 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 502 7.8E-150 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 504 51.731 T 22-04-2016 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 SUPERFAMILY SSF109604 251 432 9.42E-68 T 22-04-2016 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 SUPERFAMILY SSF109604 31 134 9.42E-68 T 22-04-2016 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 SUPERFAMILY SSF109604 182 215 9.42E-68 T 22-04-2016 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 SUPERFAMILY SSF109604 483 501 9.42E-68 T 22-04-2016 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 SMART SM00471 62 282 5.3E-11 T 22-04-2016 IPR003607 HD/PDEase domain APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 Gene3D G3DSA:1.10.3210.10 4 122 1.1E-71 T 22-04-2016 IPR006674 HD domain APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 Gene3D G3DSA:1.10.3210.10 183 268 1.1E-71 T 22-04-2016 IPR006674 HD domain APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 Pfam PF01966 HD domain 66 136 6.0E-9 T 22-04-2016 IPR006674 HD domain APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 PANTHER PTHR11373 182 285 1.5E-94 T 22-04-2016 APECO1_RS00860 d6a59d483aea6388e3c7949647ee3d7e 505 PANTHER PTHR11373 20 142 1.5E-94 T 22-04-2016 APECO1_RS26775 6eef799c192e2330e5f6c728d6c4070e 150 SUPERFAMILY SSF52374 65 150 1.01E-24 T 22-04-2016 APECO1_RS26775 6eef799c192e2330e5f6c728d6c4070e 150 Gene3D G3DSA:3.90.740.10 1 77 3.3E-29 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS26775 6eef799c192e2330e5f6c728d6c4070e 150 SUPERFAMILY SSF50677 1 76 3.66E-22 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APECO1_RS26775 6eef799c192e2330e5f6c728d6c4070e 150 PANTHER PTHR11946 1 150 4.5E-83 T 22-04-2016 APECO1_RS26775 6eef799c192e2330e5f6c728d6c4070e 150 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 1 150 1.2E-61 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS26775 6eef799c192e2330e5f6c728d6c4070e 150 PANTHER PTHR11946:SF11 1 150 4.5E-83 T 22-04-2016 APECO1_RS26775 6eef799c192e2330e5f6c728d6c4070e 150 Gene3D G3DSA:3.40.50.620 78 149 2.6E-26 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 1.4E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 Gene3D G3DSA:2.40.50.140 16 154 1.8E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 PIRSF PIRSF039101 1 505 7.4E-210 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 6.4E-84 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 PANTHER PTHR22594 1 505 6.6E-292 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 505 2.4E-241 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 Gene3D G3DSA:3.30.930.10 157 500 1.2E-123 T 22-04-2016 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.612 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 PANTHER PTHR22594:SF4 1 505 6.6E-292 T 22-04-2016 APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 SUPERFAMILY SSF50249 13 155 9.3E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS23635 383f803ab89938b07fe84ced5452d813 505 SUPERFAMILY SSF55681 162 502 2.87E-123 T 22-04-2016 APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 TIGRFAM TIGR04007 wcaI: colanic acid biosynthesis glycosyltransferase WcaI 1 407 5.4E-270 T 22-04-2016 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI UniPathway: UPA00936 APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 Pfam PF13579 Glycosyl transferase 4-like domain 15 204 7.3E-27 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 Pfam PF00534 Glycosyl transferases group 1 219 389 1.2E-20 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 SUPERFAMILY SSF53756 354 403 1.29E-38 T 22-04-2016 APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 SUPERFAMILY SSF53756 2 322 1.29E-38 T 22-04-2016 APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 PANTHER PTHR12526:SF320 104 406 5.1E-65 T 22-04-2016 APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 PANTHER PTHR12526:SF320 1 78 5.1E-65 T 22-04-2016 APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 Gene3D G3DSA:3.40.50.2000 216 285 4.8E-6 T 22-04-2016 APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 PANTHER PTHR12526 104 406 5.1E-65 T 22-04-2016 APECO1_RS11375 6176982e5919322bc1270f904ae9e30a 407 PANTHER PTHR12526 1 78 5.1E-65 T 22-04-2016 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 Gene3D G3DSA:3.40.50.1270 175 371 5.6E-81 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.19 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PANTHER PTHR11406 1 387 2.6E-202 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 SUPERFAMILY SSF53748 3 383 8.01E-145 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 Gene3D G3DSA:3.40.50.1260 5 174 2.1E-64 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 Pfam PF00162 Phosphoglycerate kinase 6 373 3.1E-138 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.6E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS16565 aff29f0997aaf745c2d595a81522ee3f 387 PIRSF PIRSF000724 1 387 1.3E-134 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APECO1_RS11240 11cb87aed4c358d8d92ab9d86af7f419 356 Gene3D G3DSA:3.90.1150.10 255 352 2.1E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS11240 11cb87aed4c358d8d92ab9d86af7f419 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 355 54.363 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APECO1_RS11240 11cb87aed4c358d8d92ab9d86af7f419 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 211 220 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APECO1_RS11240 11cb87aed4c358d8d92ab9d86af7f419 356 SUPERFAMILY SSF53383 8 352 1.75E-80 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS11240 11cb87aed4c358d8d92ab9d86af7f419 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 352 3.1E-125 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APECO1_RS11240 11cb87aed4c358d8d92ab9d86af7f419 356 Gene3D G3DSA:3.40.640.10 50 254 3.6E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS11240 11cb87aed4c358d8d92ab9d86af7f419 356 PANTHER PTHR11751:SF398 8 352 5.6E-101 T 22-04-2016 APECO1_RS11240 11cb87aed4c358d8d92ab9d86af7f419 356 PANTHER PTHR11751 8 352 5.6E-101 T 22-04-2016 APECO1_RS11240 11cb87aed4c358d8d92ab9d86af7f419 356 Pfam PF00155 Aminotransferase class I and II 46 350 1.5E-66 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS09240 21badac295a1b868bcdb2056747515af 252 Pfam PF04338 Protein of unknown function, DUF481 48 251 1.5E-55 T 22-04-2016 IPR007433 Protein of unknown function DUF481 APECO1_RS00525 3de7395019cf74412a8b9b20b72e1dec 170 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 170 5.0E-88 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 APECO1_RS00525 3de7395019cf74412a8b9b20b72e1dec 170 Hamap MF_01332 Secretion monitor [secM]. 1 170 43.15 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 APECO1_RS00525 3de7395019cf74412a8b9b20b72e1dec 170 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 167 8.1E-54 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 APECO1_RS00525 3de7395019cf74412a8b9b20b72e1dec 170 PIRSF PIRSF004572 1 170 1.4E-85 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 APECO1_RS17245 8e0e93ddc439f967567b2d547dfc8cd2 136 PIRSF PIRSF007010 4 135 5.0E-47 T 22-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein APECO1_RS17245 8e0e93ddc439f967567b2d547dfc8cd2 136 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 21 132 7.6E-39 T 22-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 PANTHER PTHR30328 1 210 3.1E-149 T 22-04-2016 APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.2E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 Gene3D G3DSA:1.10.10.60 45 62 7.9E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 Gene3D G3DSA:1.10.10.60 1 44 7.8E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 SUPERFAMILY SSF46689 1 68 3.64E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 Gene3D G3DSA:1.10.357.10 63 203 1.8E-18 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 SUPERFAMILY SSF48498 84 200 6.43E-14 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 PANTHER PTHR30328:SF26 1 210 3.1E-149 T 22-04-2016 APECO1_RS02355 27e8f13d77a01af2c9129bf6c6703e9a 215 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 202 8.6E-52 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 APECO1_RS03645 b44f939266db7350d7326798f5f7f138 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APECO1_RS03645 b44f939266db7350d7326798f5f7f138 250 SMART SM00855 5 191 2.7E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APECO1_RS03645 b44f939266db7350d7326798f5f7f138 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 3.8E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APECO1_RS03645 b44f939266db7350d7326798f5f7f138 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.985 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APECO1_RS03645 b44f939266db7350d7326798f5f7f138 250 Gene3D G3DSA:3.40.50.1240 2 250 2.1E-99 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS03645 b44f939266db7350d7326798f5f7f138 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 2.3E-130 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APECO1_RS03645 b44f939266db7350d7326798f5f7f138 250 PANTHER PTHR11931 1 250 7.2E-171 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APECO1_RS03645 b44f939266db7350d7326798f5f7f138 250 SUPERFAMILY SSF53254 4 247 5.18E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 SUPERFAMILY SSF63411 506 728 1.73E-21 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 SUPERFAMILY SSF63411 745 919 1.03E-16 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 PANTHER PTHR11851:SF124 16 819 0.0 T 22-04-2016 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 63 86 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 SUPERFAMILY SSF63411 255 448 2.44E-7 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 Gene3D G3DSA:3.30.830.10 18 258 6.6E-52 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 Gene3D G3DSA:3.30.830.10 503 729 1.7E-18 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 PANTHER PTHR11851 16 819 0.0 T 22-04-2016 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 Gene3D G3DSA:3.30.830.10 259 423 7.7E-5 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 Gene3D G3DSA:3.30.830.10 788 914 7.3E-13 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 Pfam PF05193 Peptidase M16 inactive domain 203 382 6.0E-25 T 22-04-2016 IPR007863 Peptidase M16, C-terminal APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 Pfam PF05193 Peptidase M16 inactive domain 693 858 1.2E-17 T 22-04-2016 IPR007863 Peptidase M16, C-terminal APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 Pfam PF00675 Insulinase (Peptidase family M16) 42 199 1.1E-42 T 22-04-2016 IPR011765 Peptidase M16, N-terminal APECO1_RS08240 5e7b5cee918602272f0e93ea112edc86 927 SUPERFAMILY SSF63411 31 247 2.44E-45 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS11975 034812e0808f904f3a4bfabed5cd83dc 132 Pfam PF03788 LrgA family 23 113 1.2E-28 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 APECO1_RS11975 034812e0808f904f3a4bfabed5cd83dc 132 PANTHER PTHR33931:SF2 1 132 2.8E-55 T 22-04-2016 APECO1_RS11975 034812e0808f904f3a4bfabed5cd83dc 132 PANTHER PTHR33931 1 132 2.8E-55 T 22-04-2016 APECO1_RS11975 034812e0808f904f3a4bfabed5cd83dc 132 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.864 T 22-04-2016 IPR022957 Uncharacterised protein family UPF0299 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 Pfam PF01278 Omptin family 28 317 2.8E-122 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PRINTS PR00482 Omptin serine protease signature 82 107 2.5E-116 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PRINTS PR00482 Omptin serine protease signature 143 170 2.5E-116 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PRINTS PR00482 Omptin serine protease signature 190 211 2.5E-116 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PRINTS PR00482 Omptin serine protease signature 212 233 2.5E-116 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PRINTS PR00482 Omptin serine protease signature 56 81 2.5E-116 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PRINTS PR00482 Omptin serine protease signature 36 50 2.5E-116 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PRINTS PR00482 Omptin serine protease signature 261 281 2.5E-116 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PRINTS PR00482 Omptin serine protease signature 115 142 2.5E-116 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PRINTS PR00482 Omptin serine protease signature 240 260 2.5E-116 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 ProSitePatterns PS00834 Aspartyl proteases, omptin family signature 1. 115 124 - T 22-04-2016 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 SUPERFAMILY SSF69917 23 317 6.8E-118 T 22-04-2016 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 Gene3D G3DSA:2.40.128.90 24 317 1.6E-124 T 22-04-2016 IPR023619 Peptidase A26 GO:0004190 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 PIRSF PIRSF001522 1 317 6.8E-139 T 22-04-2016 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 APECO1_RS02725 fd6540c1df0cba7bed4972394dc397c8 317 ProSitePatterns PS00835 Aspartyl proteases, omptin family signature 2. 152 168 - T 22-04-2016 IPR020079 Peptidase A26, omptin, conserved site GO:0004175|GO:0006508|GO:0009279 APECO1_RS03975 af5ffd84c362994b9fe29d9f7855931a 372 Pfam PF03600 Citrate transporter 25 304 1.7E-25 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APECO1_RS03975 af5ffd84c362994b9fe29d9f7855931a 372 PANTHER PTHR10283:SF95 17 369 4.5E-77 T 22-04-2016 APECO1_RS03975 af5ffd84c362994b9fe29d9f7855931a 372 PANTHER PTHR10283 17 369 4.5E-77 T 22-04-2016 APECO1_RS21725 654589fbd0159975e9024582a2cf47d1 316 PANTHER PTHR21535:SF37 6 316 1.7E-172 T 22-04-2016 APECO1_RS21725 654589fbd0159975e9024582a2cf47d1 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 5.4E-115 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 APECO1_RS21725 654589fbd0159975e9024582a2cf47d1 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 6.5E-57 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APECO1_RS21725 654589fbd0159975e9024582a2cf47d1 316 PANTHER PTHR21535 6 316 1.7E-172 T 22-04-2016 APECO1_RS21725 654589fbd0159975e9024582a2cf47d1 316 SUPERFAMILY SSF144083 251 314 1.31E-20 T 22-04-2016 APECO1_RS21725 654589fbd0159975e9024582a2cf47d1 316 SUPERFAMILY SSF143865 1 255 4.71E-38 T 22-04-2016 APECO1_RS21725 654589fbd0159975e9024582a2cf47d1 316 Gene3D G3DSA:1.20.58.340 240 316 2.6E-28 T 22-04-2016 APECO1_RS03970 7b71740b12a1db903033d68260a33d5b 155 SMART SM00529 56 155 1.6E-44 T 22-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 APECO1_RS03970 7b71740b12a1db903033d68260a33d5b 155 Gene3D G3DSA:1.10.10.10 36 103 8.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03970 7b71740b12a1db903033d68260a33d5b 155 PANTHER PTHR33238 35 143 1.4E-22 T 22-04-2016 APECO1_RS03970 7b71740b12a1db903033d68260a33d5b 155 PANTHER PTHR33238:SF1 35 143 1.4E-22 T 22-04-2016 APECO1_RS03970 7b71740b12a1db903033d68260a33d5b 155 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 149 1.2E-14 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APECO1_RS03970 7b71740b12a1db903033d68260a33d5b 155 SUPERFAMILY SSF47979 95 150 4.84E-15 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APECO1_RS03970 7b71740b12a1db903033d68260a33d5b 155 Gene3D G3DSA:1.10.60.10 107 150 2.7E-20 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APECO1_RS03970 7b71740b12a1db903033d68260a33d5b 155 SUPERFAMILY SSF46785 48 117 1.89E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03970 7b71740b12a1db903033d68260a33d5b 155 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 92 1.1E-10 T 22-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 APECO1_RS20195 eb3e524c4913941f7161f0c9caeea37a 686 Pfam PF05170 AsmA family 1 581 9.2E-186 T 22-04-2016 IPR007844 AsmA APECO1_RS20195 eb3e524c4913941f7161f0c9caeea37a 686 PANTHER PTHR30441:SF2 6 685 3.3E-190 T 22-04-2016 APECO1_RS20195 eb3e524c4913941f7161f0c9caeea37a 686 PANTHER PTHR30441 6 685 3.3E-190 T 22-04-2016 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 Pfam PF00207 Alpha-2-macroglobulin family 977 1056 9.6E-8 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 289 381 1.2E-20 T 22-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 759 906 3.4E-11 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 Gene3D G3DSA:1.50.10.20 1175 1434 1.3E-37 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 SMART SM01359 758 906 2.5E-31 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 SMART SM01360 968 1057 1.9E-20 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 Pfam PF01835 MG2 domain 388 479 2.1E-20 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 PANTHER PTHR11412 1635 1652 0.0 T 22-04-2016 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 PANTHER PTHR11412 258 651 0.0 T 22-04-2016 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 PANTHER PTHR11412 667 961 0.0 T 22-04-2016 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 SUPERFAMILY SSF48239 1177 1434 2.36E-43 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 PANTHER PTHR11412:SF104 1635 1652 0.0 T 22-04-2016 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 PANTHER PTHR11412:SF104 258 651 0.0 T 22-04-2016 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 PANTHER PTHR11412:SF104 667 961 0.0 T 22-04-2016 APECO1_RS14300 367ef53edf866a45fe594b10147e96a5 1653 PIRSF PIRSF038980 1 1653 0.0 T 22-04-2016 IPR026284 Alpha-2-macroglobulin domain protein, bacteria APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 SUPERFAMILY SSF47823 6 98 2.16E-11 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 2.2E-26 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 9 296 2.9E-111 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 294 36.981 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Gene3D G3DSA:1.10.150.130 5 101 7.2E-25 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Pfam PF00589 Phage integrase family 113 280 1.4E-52 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 PANTHER PTHR30349 4 296 4.7E-176 T 22-04-2016 APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 SUPERFAMILY SSF56349 107 292 2.85E-54 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 PANTHER PTHR30349:SF17 4 296 4.7E-176 T 22-04-2016 APECO1_RS21695 e1f94f9d7eb3a8e3f7538678f0019aa8 298 Gene3D G3DSA:1.10.443.10 115 287 1.7E-52 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS05790 f08e9f56912ae112bf273a8bb51c041b 261 Pfam PF03837 RecT family 24 99 1.5E-14 T 22-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 APECO1_RS05790 f08e9f56912ae112bf273a8bb51c041b 261 Pfam PF03837 RecT family 104 182 3.3E-12 T 22-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 APECO1_RS05790 f08e9f56912ae112bf273a8bb51c041b 261 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 12 176 2.3E-50 T 22-04-2016 IPR010183 Bacteriophage lambda, Bet APECO1_RS09515 10c7e7abba1595d1fbb4b2d144562494 358 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 132 2.5E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS09515 10c7e7abba1595d1fbb4b2d144562494 358 Pfam PF00107 Zinc-binding dehydrogenase 185 316 1.9E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS09515 10c7e7abba1595d1fbb4b2d144562494 358 PANTHER PTHR11695:SF38 14 355 2.4E-117 T 22-04-2016 APECO1_RS09515 10c7e7abba1595d1fbb4b2d144562494 358 PANTHER PTHR11695 14 355 2.4E-117 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS09515 10c7e7abba1595d1fbb4b2d144562494 358 Gene3D G3DSA:3.90.180.10 1 178 2.7E-42 T 22-04-2016 IPR011032 GroES-like APECO1_RS09515 10c7e7abba1595d1fbb4b2d144562494 358 SUPERFAMILY SSF51735 147 321 1.97E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09515 10c7e7abba1595d1fbb4b2d144562494 358 SUPERFAMILY SSF50129 3 184 1.38E-37 T 22-04-2016 IPR011032 GroES-like APECO1_RS09515 10c7e7abba1595d1fbb4b2d144562494 358 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS09515 10c7e7abba1595d1fbb4b2d144562494 358 Gene3D G3DSA:3.40.50.720 179 300 3.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 PIRSF PIRSF002764 1 219 2.5E-83 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 1.4E-95 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 PANTHER PTHR30070 1 219 1.0E-75 T 22-04-2016 APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 4.95E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 4.95E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 4.95E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 4.95E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 4.95E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 4.95E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 PANTHER PTHR30070:SF1 1 219 1.0E-75 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12285 8f8f57b7a2386d3022356e0413c28c9b 219 Pfam PF03379 CcmB protein 2 216 8.3E-92 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS16095 795d0159655b995e41150d6eb2793d94 315 Gene3D G3DSA:3.40.50.720 17 112 4.5E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16095 795d0159655b995e41150d6eb2793d94 315 SUPERFAMILY SSF51735 103 285 3.19E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16095 795d0159655b995e41150d6eb2793d94 315 Gene3D G3DSA:3.40.50.720 113 285 2.1E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16095 795d0159655b995e41150d6eb2793d94 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 284 3.7E-47 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APECO1_RS16095 795d0159655b995e41150d6eb2793d94 315 SUPERFAMILY SSF52283 20 137 1.87E-22 T 22-04-2016 APECO1_RS16095 795d0159655b995e41150d6eb2793d94 315 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 17 314 1.1E-21 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APECO1_RS16095 795d0159655b995e41150d6eb2793d94 315 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APECO1_RS16095 795d0159655b995e41150d6eb2793d94 315 PANTHER PTHR10996 48 314 2.6E-85 T 22-04-2016 APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 PANTHER PTHR10584:SF157 1 297 1.4E-121 T 22-04-2016 APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 PANTHER PTHR10584 1 297 1.4E-121 T 22-04-2016 APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 Gene3D G3DSA:3.40.1190.20 2 295 3.8E-79 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 Hamap MF_00999 Sulfofructose kinase. 1 298 61.283 T 22-04-2016 IPR030877 Sulfofructose kinase GO:0061594 MetaCyc: PWY-7446 APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 SUPERFAMILY SSF53613 1 294 5.14E-66 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 PRINTS PR00990 Ribokinase signature 6 27 2.7E-6 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 PRINTS PR00990 Ribokinase signature 209 220 2.7E-6 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 PRINTS PR00990 Ribokinase signature 33 52 2.7E-6 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 238 251 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS22130 7a733c4b02c2d90f422972502eff36d0 298 Pfam PF00294 pfkB family carbohydrate kinase 1 286 2.7E-56 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 PANTHER PTHR30483 1 359 0.0 T 22-04-2016 APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 Pfam PF13458 Periplasmic binding protein 26 363 1.7E-62 T 22-04-2016 IPR028081 Leucine-binding protein domain APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 PANTHER PTHR30483:SF16 1 359 0.0 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 Gene3D G3DSA:3.40.50.2300 24 224 2.8E-66 T 22-04-2016 APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 SUPERFAMILY SSF53822 24 364 1.18E-91 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 1.9E-66 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 1.9E-66 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 1.9E-66 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 1.9E-66 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 1.9E-66 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.9E-66 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19785 d3f22d770281060e02632b6802bb3cae 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 1.9E-66 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 PANTHER PTHR32071 1 414 4.1E-228 T 22-04-2016 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 SUPERFAMILY SSF52540 141 339 3.04E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 PANTHER PTHR32071:SF29 1 414 4.1E-228 T 22-04-2016 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 Gene3D G3DSA:1.10.10.60 350 408 7.2E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 Gene3D G3DSA:1.10.8.60 285 341 6.2E-14 T 22-04-2016 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 SUPERFAMILY SSF46689 326 408 5.02E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 SUPERFAMILY SSF52172 5 185 3.27E-38 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 SMART SM00448 6 117 2.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 Gene3D G3DSA:3.40.50.2300 5 135 4.6E-32 T 22-04-2016 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 Pfam PF02954 Bacterial regulatory protein, Fis family 366 406 1.8E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 Pfam PF00072 Response regulator receiver domain 8 117 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 Pfam PF14532 Sigma-54 interaction domain 143 278 1.4E-14 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS16950 42e186f77182675d26dc77eec4b9a7ac 415 Gene3D G3DSA:3.40.50.300 141 283 1.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21885 8fc0f39d608f014474968ffb90e60976 254 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 6.9E-133 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 APECO1_RS21885 8fc0f39d608f014474968ffb90e60976 254 PANTHER PTHR21234 1 254 1.7E-198 T 22-04-2016 IPR018017 Nucleoside phosphorylase APECO1_RS21885 8fc0f39d608f014474968ffb90e60976 254 SUPERFAMILY SSF53167 6 250 6.55E-73 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS21885 8fc0f39d608f014474968ffb90e60976 254 Gene3D G3DSA:3.40.50.1580 5 252 9.6E-85 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS21885 8fc0f39d608f014474968ffb90e60976 254 Pfam PF01048 Phosphorylase superfamily 21 250 1.1E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS21885 8fc0f39d608f014474968ffb90e60976 254 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APECO1_RS21885 8fc0f39d608f014474968ffb90e60976 254 PANTHER PTHR21234:SF22 1 254 1.7E-198 T 22-04-2016 APECO1_RS09355 6067cabb7731d9935a35d63bfc4344a6 447 PANTHER PTHR30420:SF2 2 441 0.0 T 22-04-2016 APECO1_RS09355 6067cabb7731d9935a35d63bfc4344a6 447 SUPERFAMILY SSF55909 3 441 1.16E-204 T 22-04-2016 APECO1_RS09355 6067cabb7731d9935a35d63bfc4344a6 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 440 2.4E-242 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 APECO1_RS09355 6067cabb7731d9935a35d63bfc4344a6 447 Gene3D G3DSA:3.75.10.20 1 445 1.0E-235 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 APECO1_RS09355 6067cabb7731d9935a35d63bfc4344a6 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 441 58.867 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 APECO1_RS09355 6067cabb7731d9935a35d63bfc4344a6 447 Pfam PF04996 Succinylarginine dihydrolase 3 440 3.1E-213 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 APECO1_RS09355 6067cabb7731d9935a35d63bfc4344a6 447 PANTHER PTHR30420 2 441 0.0 T 22-04-2016 APECO1_RS01210 599e88465ee90586484d42388bf7ac06 494 PANTHER PTHR35565:SF1 1 494 7.3E-297 T 22-04-2016 APECO1_RS01210 599e88465ee90586484d42388bf7ac06 494 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 492 6.3E-204 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath APECO1_RS01210 599e88465ee90586484d42388bf7ac06 494 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 492 9.4E-173 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath APECO1_RS01210 599e88465ee90586484d42388bf7ac06 494 PANTHER PTHR35565 1 494 7.3E-297 T 22-04-2016 APECO1_RS09520 6449dcd2d0a59a0ba893f9b679694dbd 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 80 7.6E-29 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 APECO1_RS12195 d4897918f175b1f2ae85206babd6293b 396 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 4.0E-42 T 22-04-2016 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 APECO1_RS12195 d4897918f175b1f2ae85206babd6293b 396 SUPERFAMILY SSF103473 8 395 9.29E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS12195 d4897918f175b1f2ae85206babd6293b 396 PANTHER PTHR23502 11 379 6.8E-215 T 22-04-2016 APECO1_RS12195 d4897918f175b1f2ae85206babd6293b 396 Gene3D G3DSA:1.20.1250.20 12 194 1.6E-33 T 22-04-2016 APECO1_RS12195 d4897918f175b1f2ae85206babd6293b 396 Gene3D G3DSA:1.20.1250.20 211 393 2.5E-10 T 22-04-2016 APECO1_RS12195 d4897918f175b1f2ae85206babd6293b 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 390 5.8E-162 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APECO1_RS12195 d4897918f175b1f2ae85206babd6293b 396 Pfam PF07690 Major Facilitator Superfamily 16 358 1.1E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS12195 d4897918f175b1f2ae85206babd6293b 396 PANTHER PTHR23502:SF39 11 379 6.8E-215 T 22-04-2016 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PANTHER PTHR30381:SF1 2 365 3.5E-235 T 22-04-2016 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 4 365 40.105 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 Pfam PF02119 Flagellar P-ring protein 21 364 2.4E-137 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 7.0E-93 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PRINTS PR01010 Flagellar P-ring protein signature 36 51 7.0E-93 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 7.0E-93 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PRINTS PR01010 Flagellar P-ring protein signature 21 36 7.0E-93 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 7.0E-93 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 7.0E-93 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 7.0E-93 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 7.0E-93 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 7.0E-93 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APECO1_RS05450 b085ab67d71769060ec120376d93f62e 365 PANTHER PTHR30381 2 365 3.5E-235 T 22-04-2016 APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 PANTHER PTHR26402:SF603 145 272 7.9E-95 T 22-04-2016 APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 PANTHER PTHR26402:SF603 94 110 7.9E-95 T 22-04-2016 APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 565 675 6.8E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 Gene3D G3DSA:3.30.565.10 521 676 7.5E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 Pfam PF01627 Hpt domain 811 868 3.2E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 Pfam PF16359 RcsD-ABL domain 688 789 2.3E-39 T 22-04-2016 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 Gene3D G3DSA:1.20.120.160 776 889 6.3E-36 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 PANTHER PTHR26402 145 272 7.9E-95 T 22-04-2016 APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 PANTHER PTHR26402 94 110 7.9E-95 T 22-04-2016 APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 15 890 24.82 T 22-04-2016 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 SUPERFAMILY SSF47226 803 889 1.7E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 SMART SM00387 565 678 6.6E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS12375 6f3fdd47c2ca1fdc3b288ce4e8a472f5 890 SUPERFAMILY SSF55874 517 678 2.74E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS00850 6d0c5ffa38fc312c45ccc10d57d4097a 266 Gene3D G3DSA:3.40.50.1980 24 138 9.6E-35 T 22-04-2016 APECO1_RS00850 6d0c5ffa38fc312c45ccc10d57d4097a 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 266 48.186 T 22-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 APECO1_RS00850 6d0c5ffa38fc312c45ccc10d57d4097a 266 SUPERFAMILY SSF53807 25 262 1.37E-57 T 22-04-2016 APECO1_RS00850 6d0c5ffa38fc312c45ccc10d57d4097a 266 Gene3D G3DSA:3.40.50.1980 142 262 9.3E-36 T 22-04-2016 APECO1_RS00850 6d0c5ffa38fc312c45ccc10d57d4097a 266 Pfam PF01497 Periplasmic binding protein 26 217 2.2E-24 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APECO1_RS00850 6d0c5ffa38fc312c45ccc10d57d4097a 266 PANTHER PTHR30535 25 262 1.4E-52 T 22-04-2016 APECO1_RS04850 0a930c3628a0886aa709573f99151b01 172 SUPERFAMILY SSF54637 3 169 9.94E-56 T 22-04-2016 IPR029069 HotDog domain APECO1_RS04850 0a930c3628a0886aa709573f99151b01 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.692 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APECO1_RS04850 0a930c3628a0886aa709573f99151b01 172 Pfam PF07977 FabA-like domain 29 158 3.8E-54 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APECO1_RS04850 0a930c3628a0886aa709573f99151b01 172 Gene3D G3DSA:3.10.129.10 2 169 9.8E-62 T 22-04-2016 IPR029069 HotDog domain APECO1_RS04850 0a930c3628a0886aa709573f99151b01 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 3.9E-98 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 PANTHER PTHR30146:SF30 1 329 2.4E-115 T 22-04-2016 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 77 323 3.4E-24 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 Gene3D G3DSA:1.10.260.40 2 51 2.5E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 9.1E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 9.1E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 SMART SM00354 2 72 4.0E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 SUPERFAMILY SSF53822 75 325 7.07E-60 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 Gene3D G3DSA:3.40.50.2300 52 179 2.5E-31 T 22-04-2016 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.1E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 SUPERFAMILY SSF47413 2 57 1.75E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 Gene3D G3DSA:3.40.50.2300 180 317 7.2E-34 T 22-04-2016 APECO1_RS07305 357d30e3e91c094d67acadc3528c2d43 332 PANTHER PTHR30146 1 329 2.4E-115 T 22-04-2016 APECO1_RS13850 79de25710027b9941b278a537a881745 287 Pfam PF04228 Putative neutral zinc metallopeptidase 1 283 5.5E-143 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative APECO1_RS13850 79de25710027b9941b278a537a881745 287 PANTHER PTHR30168 2 287 3.4E-158 T 22-04-2016 APECO1_RS08460 cdaf7b52214d035b0fc3f605172f0313 681 PANTHER PTHR11804 1 679 0.0 T 22-04-2016 APECO1_RS08460 cdaf7b52214d035b0fc3f605172f0313 681 PANTHER PTHR11804:SF47 1 679 0.0 T 22-04-2016 APECO1_RS08460 cdaf7b52214d035b0fc3f605172f0313 681 Pfam PF01432 Peptidase family M3 230 678 4.7E-147 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APECO1_RS08460 cdaf7b52214d035b0fc3f605172f0313 681 SUPERFAMILY SSF55486 5 679 4.62E-173 T 22-04-2016 APECO1_RS08460 cdaf7b52214d035b0fc3f605172f0313 681 Gene3D G3DSA:3.40.390.10 362 504 2.8E-51 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APECO1_RS08460 cdaf7b52214d035b0fc3f605172f0313 681 Gene3D G3DSA:1.10.1370.10 505 680 6.0E-111 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APECO1_RS08460 cdaf7b52214d035b0fc3f605172f0313 681 Gene3D G3DSA:1.10.1370.10 146 352 6.0E-111 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APECO1_RS08460 cdaf7b52214d035b0fc3f605172f0313 681 Gene3D G3DSA:1.20.1050.40 12 143 2.1E-18 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APECO1_RS03160 cb4887b04e48fc3f18bc3fb1f673ca43 513 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 1.2E-122 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 APECO1_RS03160 cb4887b04e48fc3f18bc3fb1f673ca43 513 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 24.097 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 APECO1_RS03160 cb4887b04e48fc3f18bc3fb1f673ca43 513 Pfam PF00795 Carbon-nitrogen hydrolase 224 478 3.1E-39 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APECO1_RS03160 cb4887b04e48fc3f18bc3fb1f673ca43 513 PANTHER PTHR38686 2 513 4.4E-178 T 22-04-2016 APECO1_RS03160 cb4887b04e48fc3f18bc3fb1f673ca43 513 SUPERFAMILY SSF56317 216 490 1.44E-36 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APECO1_RS03160 cb4887b04e48fc3f18bc3fb1f673ca43 513 Gene3D G3DSA:3.60.110.10 216 478 4.7E-22 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APECO1_RS19925 8f66727642fb90c715defc8e471ff0f9 254 SUPERFAMILY SSF52540 16 241 5.01E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19925 8f66727642fb90c715defc8e471ff0f9 254 SMART SM00382 28 218 7.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19925 8f66727642fb90c715defc8e471ff0f9 254 PANTHER PTHR24220 4 243 2.7E-88 T 22-04-2016 APECO1_RS19925 8f66727642fb90c715defc8e471ff0f9 254 Pfam PF00005 ABC transporter 20 168 2.0E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19925 8f66727642fb90c715defc8e471ff0f9 254 Gene3D G3DSA:3.40.50.300 5 242 2.8E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19925 8f66727642fb90c715defc8e471ff0f9 254 PANTHER PTHR24220:SF574 4 243 2.7E-88 T 22-04-2016 APECO1_RS19925 8f66727642fb90c715defc8e471ff0f9 254 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 18 245 2.9E-106 T 22-04-2016 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 APECO1_RS19925 8f66727642fb90c715defc8e471ff0f9 254 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS03810 579da4df312700556fdc4b955f97e77e 234 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 230 5.5E-60 T 22-04-2016 APECO1_RS03810 579da4df312700556fdc4b955f97e77e 234 PANTHER PTHR23291 5 234 2.1E-96 T 22-04-2016 IPR006214 Bax inhibitor 1-related APECO1_RS03810 579da4df312700556fdc4b955f97e77e 234 PANTHER PTHR23291:SF42 5 234 2.1E-96 T 22-04-2016 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 Gene3D G3DSA:3.40.50.620 1 157 7.3E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.8E-53 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.8E-53 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.8E-53 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.8E-53 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.8E-53 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.001 T 22-04-2016 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 6.1E-19 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 2.1E-62 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 PANTHER PTHR21342 1 159 3.3E-88 T 22-04-2016 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 Pfam PF01467 Cytidylyltransferase-like 6 134 3.7E-23 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 37.294 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 PANTHER PTHR21342:SF1 1 159 3.3E-88 T 22-04-2016 APECO1_RS20765 266f47a6e3f164222d8a0fe2fa878875 159 SUPERFAMILY SSF52374 3 156 4.02E-47 T 22-04-2016 APECO1_RS02720 3963c5d65125165b520818a2ffa7960e 218 Pfam PF08242 Methyltransferase domain 54 151 4.7E-7 T 22-04-2016 IPR013217 Methyltransferase type 12 APECO1_RS02720 3963c5d65125165b520818a2ffa7960e 218 Gene3D G3DSA:3.40.50.150 50 176 3.9E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS02720 3963c5d65125165b520818a2ffa7960e 218 SUPERFAMILY SSF53335 7 193 6.76E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS02720 3963c5d65125165b520818a2ffa7960e 218 PIRSF PIRSF011491 1 218 1.8E-99 T 22-04-2016 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 Gene3D G3DSA:2.40.50.100 120 184 9.3E-32 T 22-04-2016 APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 Pfam PF03459 TOBE domain 125 187 7.1E-12 T 22-04-2016 IPR005116 Transport-associated OB, type 1 APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 Pfam PF03459 TOBE domain 199 257 9.0E-14 T 22-04-2016 IPR005116 Transport-associated OB, type 1 APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 SUPERFAMILY SSF50331 123 192 7.29E-17 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 PANTHER PTHR30432 1 262 1.4E-73 T 22-04-2016 APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 Gene3D G3DSA:1.10.10.10 1 119 3.6E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 1.2E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 SUPERFAMILY SSF50331 200 259 1.74E-14 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 113 4.2E-41 T 22-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 PIRSF PIRSF005763 1 262 6.0E-101 T 22-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 SUPERFAMILY SSF46785 2 106 2.61E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 Gene3D G3DSA:2.40.50.100 185 252 5.5E-23 T 22-04-2016 APECO1_RS03680 c3639168ec6dc08b0fffbf6743533a88 262 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 192 7.0E-28 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 PANTHER PTHR13779:SF7 11 447 1.3E-200 T 22-04-2016 APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 Gene3D G3DSA:1.10.8.60 154 228 1.6E-8 T 22-04-2016 APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 PANTHER PTHR13779 11 447 1.3E-200 T 22-04-2016 APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 Gene3D G3DSA:1.10.3710.10 348 444 2.2E-34 T 22-04-2016 APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 Gene3D G3DSA:1.20.272.10 249 347 3.1E-42 T 22-04-2016 APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 SUPERFAMILY SSF52540 6 234 2.72E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 4.7E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 SUPERFAMILY SSF48019 252 434 6.23E-71 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 SMART SM00382 49 165 2.6E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 Gene3D G3DSA:3.40.50.300 11 153 2.3E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 Pfam PF16193 AAA C-terminal domain 188 267 5.5E-22 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain APECO1_RS04380 25b4e9bc24b6d32ba23f14d907b498c0 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 3.1E-64 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal APECO1_RS05340 c3864d527ffe9ff14407f2f03e178b44 37 Pfam PF10968 Protein of unknown function (DUF2770) 1 36 1.9E-20 T 22-04-2016 IPR024494 Protein of unknown function DUF2770 APECO1_RS05340 c3864d527ffe9ff14407f2f03e178b44 37 ProDom PD049682 YCEO INNER MEMBRANE STY1197 1 37 4.0E-13 T 22-04-2016 IPR024494 Protein of unknown function DUF2770 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 Gene3D G3DSA:3.40.47.10 1 9 1.2E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 Gene3D G3DSA:3.40.47.10 81 162 1.2E-26 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 Pfam PF02803 Thiolase, C-terminal domain 156 278 2.5E-53 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 Pfam PF00108 Thiolase, N-terminal domain 1 149 2.5E-57 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 Gene3D G3DSA:3.40.47.10 163 278 2.7E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 Gene3D G3DSA:3.40.47.10 30 80 2.7E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 SUPERFAMILY SSF53901 157 278 1.26E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 PANTHER PTHR18919 1 280 8.3E-212 T 22-04-2016 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 SUPERFAMILY SSF53901 1 155 2.28E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 ProSitePatterns PS00737 Thiolases signature 2. 225 241 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 1 277 7.0E-107 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 PANTHER PTHR18919:SF88 1 280 8.3E-212 T 22-04-2016 APECO1_RS12415 e64e8dc27622abd6ccb26e1ed1e83e14 280 ProSitePatterns PS00099 Thiolases active site. 260 273 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 34.043 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 PIRSF PIRSF005261 1 285 1.7E-72 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 Pfam PF01430 Hsp33 protein 5 272 3.2E-86 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 PANTHER PTHR30111 1 288 4.9E-94 T 22-04-2016 APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 Gene3D G3DSA:1.10.287.480 178 225 6.2E-27 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 PANTHER PTHR30111:SF1 1 288 4.9E-94 T 22-04-2016 APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 SUPERFAMILY SSF64397 4 232 7.19E-77 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 Gene3D G3DSA:3.55.30.10 2 176 3.5E-67 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 SUPERFAMILY SSF118352 225 283 3.27E-20 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APECO1_RS19460 318d18d3118b6b44e1aed873603a898a 292 Gene3D G3DSA:3.90.1280.10 226 283 1.7E-25 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 SUPERFAMILY SSF54826 8 137 6.89E-30 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 SUPERFAMILY SSF51604 139 415 1.13E-80 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 PANTHER PTHR13794 7 152 0.0 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 PANTHER PTHR13794 173 431 0.0 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 Gene3D G3DSA:3.20.20.120 119 398 1.3E-100 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 6 446 1.1E-270 T 22-04-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 Gene3D G3DSA:3.30.390.10 11 118 7.7E-8 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 SMART SM00922 185 285 8.9E-16 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 PANTHER PTHR13794:SF47 7 152 0.0 T 22-04-2016 APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 PANTHER PTHR13794:SF47 173 431 0.0 T 22-04-2016 APECO1_RS15810 1d62b469dc802188e88b1c18b306cf80 446 Pfam PF13378 Enolase C-terminal domain-like 189 405 8.2E-37 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 4.7E-152 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Gene3D G3DSA:1.20.50.20 368 426 2.0E-28 T 22-04-2016 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 9.8E-44 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 SMART SM00400 36 90 7.6E-38 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 SUPERFAMILY SSF56731 115 428 1.96E-116 T 22-04-2016 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 PANTHER PTHR30313 3 579 4.9E-186 T 22-04-2016 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 PIRSF PIRSF002811 2 580 2.5E-146 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 SUPERFAMILY SSF117023 447 579 3.01E-43 T 22-04-2016 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Gene3D G3DSA:3.90.980.10 116 240 2.6E-47 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.612 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Gene3D G3DSA:1.10.860.10 437 580 4.5E-55 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 SUPERFAMILY SSF57783 4 100 8.67E-36 T 22-04-2016 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Gene3D G3DSA:3.90.580.10 1 100 1.5E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Pfam PF10410 DnaB-helicase binding domain of primase 369 424 8.3E-13 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Pfam PF13155 Toprim-like 263 348 4.0E-15 T 22-04-2016 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 SMART SM00766 450 575 1.4E-48 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Gene3D G3DSA:3.40.1360.10 241 367 1.1E-48 T 22-04-2016 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 SMART SM00493 259 330 2.3E-21 T 22-04-2016 IPR006171 Toprim domain APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Pfam PF01807 CHC2 zinc finger 7 100 5.3E-41 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APECO1_RS17840 a3c0ae3d9cda8b179c03dc5b56253dc4 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 2.7E-33 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 SUPERFAMILY SSF55200 90 179 3.92E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 Gene3D G3DSA:3.30.110.10 87 179 1.6E-40 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 Gene3D G3DSA:3.10.20.80 13 86 1.2E-35 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 SUPERFAMILY SSF54364 13 86 7.85E-29 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 8.4E-38 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 PANTHER PTHR10938 10 180 2.7E-70 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 8.3E-31 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.82 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APECO1_RS09220 45916890555801d87d58e0e9bacc14fc 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 4.1E-78 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APECO1_RS16050 e94db9106812b1bf1691966ee97e2cc3 545 PANTHER PTHR37024 11 534 3.5E-134 T 22-04-2016 APECO1_RS16050 e94db9106812b1bf1691966ee97e2cc3 545 PANTHER PTHR37024:SF1 11 534 3.5E-134 T 22-04-2016 APECO1_RS16050 e94db9106812b1bf1691966ee97e2cc3 545 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 235 498 2.9E-85 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 APECO1_RS16050 e94db9106812b1bf1691966ee97e2cc3 545 Pfam PF06812 ImpA, N-terminal, type VI secretion system 43 147 2.1E-17 T 22-04-2016 IPR010657 ImpA, N-terminal APECO1_RS16050 e94db9106812b1bf1691966ee97e2cc3 545 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 38 499 1.5E-143 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 APECO1_RS00855 0e6003b175c65911bc68fb215270015c 232 Gene3D G3DSA:3.40.50.1580 1 229 4.2E-77 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS00855 0e6003b175c65911bc68fb215270015c 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.921 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 APECO1_RS00855 0e6003b175c65911bc68fb215270015c 232 PANTHER PTHR21234:SF16 1 229 4.5E-61 T 22-04-2016 APECO1_RS00855 0e6003b175c65911bc68fb215270015c 232 PANTHER PTHR21234 1 229 4.5E-61 T 22-04-2016 IPR018017 Nucleoside phosphorylase APECO1_RS00855 0e6003b175c65911bc68fb215270015c 232 SUPERFAMILY SSF53167 1 229 4.32E-75 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS00855 0e6003b175c65911bc68fb215270015c 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 9.6E-138 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 APECO1_RS00855 0e6003b175c65911bc68fb215270015c 232 Pfam PF01048 Phosphorylase superfamily 2 226 6.2E-49 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 PANTHER PTHR11731:SF123 160 428 3.2E-137 T 22-04-2016 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 PANTHER PTHR11731:SF123 1 121 3.2E-137 T 22-04-2016 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.523 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Gene3D G3DSA:3.40.50.10070 22 154 4.0E-51 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.8E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 4.2E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 396 0.0031 T 22-04-2016 IPR011659 WD40-like Beta Propeller APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 4.3E-10 T 22-04-2016 IPR011659 WD40-like Beta Propeller APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Gene3D G3DSA:2.130.10.10 155 428 9.0E-75 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 4.4E-157 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 PANTHER PTHR11731 160 428 3.2E-137 T 22-04-2016 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 PANTHER PTHR11731 1 121 3.2E-137 T 22-04-2016 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 SUPERFAMILY SSF52964 29 161 4.84E-40 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 SUPERFAMILY SSF69304 155 428 7.98E-56 T 22-04-2016 APECO1_RS03565 5506f1e2c28b9da3d0e59cb3d8ba2457 430 Pfam PF04052 TolB amino-terminal domain 23 121 4.5E-31 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APECO1_RS14815 ac673753aa9c4d9445293634b5eae8a4 96 Gene3D G3DSA:3.10.20.280 4 89 1.1E-37 T 22-04-2016 IPR005346 RnfH protein APECO1_RS14815 ac673753aa9c4d9445293634b5eae8a4 96 Pfam PF03658 RnfH family Ubiquitin 5 87 1.5E-34 T 22-04-2016 IPR005346 RnfH protein APECO1_RS14815 ac673753aa9c4d9445293634b5eae8a4 96 PANTHER PTHR37483 2 95 1.6E-43 T 22-04-2016 APECO1_RS14815 ac673753aa9c4d9445293634b5eae8a4 96 SUPERFAMILY SSF54285 4 79 2.35E-26 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APECO1_RS14815 ac673753aa9c4d9445293634b5eae8a4 96 PANTHER PTHR37483:SF1 2 95 1.6E-43 T 22-04-2016 APECO1_RS14815 ac673753aa9c4d9445293634b5eae8a4 96 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 25.889 T 22-04-2016 IPR005346 RnfH protein APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 SMART SM00342 158 240 2.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 Gene3D G3DSA:1.10.10.60 145 193 6.5E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 Pfam PF12833 Helix-turn-helix domain 164 242 3.3E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 PANTHER PTHR11019:SF92 133 248 1.2E-172 T 22-04-2016 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 PANTHER PTHR11019:SF92 1 117 1.2E-172 T 22-04-2016 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 SUPERFAMILY SSF46689 193 242 2.73E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 236 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 Gene3D G3DSA:1.10.10.60 194 242 4.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 PANTHER PTHR11019 133 248 1.2E-172 T 22-04-2016 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 PANTHER PTHR11019 1 117 1.2E-172 T 22-04-2016 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 1.42E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS20155 ca01e0ce3a8057b02081bb4a10cce5e1 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 1.42E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS17535 d9a37ffcb0d7d0b7854c8553946fad5e 160 PANTHER PTHR35011 1 160 1.2E-42 T 22-04-2016 APECO1_RS17535 d9a37ffcb0d7d0b7854c8553946fad5e 160 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 154 4.0E-26 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component APECO1_RS17535 d9a37ffcb0d7d0b7854c8553946fad5e 160 PANTHER PTHR35011:SF2 1 160 1.2E-42 T 22-04-2016 APECO1_RS02420 30f6cf8fbf3eb2d61642900f985574c9 319 Hamap MF_01958 Acetyl esterase [aes]. 1 319 72.46 T 22-04-2016 IPR023508 Acetyl esterase GO:0005737|GO:0052689 APECO1_RS02420 30f6cf8fbf3eb2d61642900f985574c9 319 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 APECO1_RS02420 30f6cf8fbf3eb2d61642900f985574c9 319 PANTHER PTHR23024 57 319 1.0E-198 T 22-04-2016 APECO1_RS02420 30f6cf8fbf3eb2d61642900f985574c9 319 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 22-04-2016 IPR033140 Lipase, GDXG, putative serine active site APECO1_RS02420 30f6cf8fbf3eb2d61642900f985574c9 319 PANTHER PTHR23024:SF176 57 319 1.0E-198 T 22-04-2016 APECO1_RS02420 30f6cf8fbf3eb2d61642900f985574c9 319 Pfam PF07859 alpha/beta hydrolase fold 87 295 5.1E-53 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APECO1_RS02420 30f6cf8fbf3eb2d61642900f985574c9 319 SUPERFAMILY SSF53474 29 316 2.05E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS02420 30f6cf8fbf3eb2d61642900f985574c9 319 Gene3D G3DSA:3.40.50.1820 13 316 2.6E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 SMART SM00866 97 237 2.0E-24 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 Pfam PF07702 UTRA domain 98 236 8.7E-26 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 Gene3D G3DSA:1.10.10.10 5 71 3.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 2.4E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 PANTHER PTHR11751:SF292 126 150 1.6E-37 T 22-04-2016 APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 PANTHER PTHR11751:SF292 10 78 1.6E-37 T 22-04-2016 APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 SUPERFAMILY SSF64288 63 244 1.73E-38 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 6.89E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 6.89E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 SMART SM00345 16 75 2.8E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 SUPERFAMILY SSF46785 6 79 1.52E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 Gene3D G3DSA:3.40.1410.10 72 244 1.9E-40 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 PANTHER PTHR11751 126 150 1.6E-37 T 22-04-2016 APECO1_RS19940 f8512aa6e05e08f9665e0a979bd4ac9d 248 PANTHER PTHR11751 10 78 1.6E-37 T 22-04-2016 APECO1_RS12050 b6f7e4ec13571ed902d3a4f9b8963c6c 278 Pfam PF00756 Putative esterase 21 271 1.6E-72 T 22-04-2016 IPR000801 Putative esterase APECO1_RS12050 b6f7e4ec13571ed902d3a4f9b8963c6c 278 SUPERFAMILY SSF53474 1 276 3.11E-90 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS12050 b6f7e4ec13571ed902d3a4f9b8963c6c 278 PANTHER PTHR10061 1 278 2.1E-177 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APECO1_RS12050 b6f7e4ec13571ed902d3a4f9b8963c6c 278 Gene3D G3DSA:3.40.50.1820 1 276 6.5E-79 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS12050 b6f7e4ec13571ed902d3a4f9b8963c6c 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 275 4.1E-118 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APECO1_RS08555 e3bc3c3c0834444c01aa17078c383459 231 PANTHER PTHR21343 1 231 6.8E-171 T 22-04-2016 APECO1_RS08555 e3bc3c3c0834444c01aa17078c383459 231 SUPERFAMILY SSF52540 1 213 5.69E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS08555 e3bc3c3c0834444c01aa17078c383459 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 220 23.964 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS08555 e3bc3c3c0834444c01aa17078c383459 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 1.4E-39 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS08555 e3bc3c3c0834444c01aa17078c383459 231 PANTHER PTHR21343:SF12 1 231 6.8E-171 T 22-04-2016 APECO1_RS08555 e3bc3c3c0834444c01aa17078c383459 231 Pfam PF13500 AAA domain 4 207 1.0E-28 T 22-04-2016 APECO1_RS08555 e3bc3c3c0834444c01aa17078c383459 231 Gene3D G3DSA:3.40.50.300 2 212 6.0E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS08555 e3bc3c3c0834444c01aa17078c383459 231 PIRSF PIRSF006755 1 225 5.3E-63 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APECO1_RS04570 42ad94ec1fec37315ba3fc4210a242a8 138 PANTHER PTHR35861 1 127 9.7E-14 T 22-04-2016 APECO1_RS04570 42ad94ec1fec37315ba3fc4210a242a8 138 Pfam PF04984 Phage tail sheath protein 1 95 5.9E-18 T 22-04-2016 IPR007067 Tail sheath protein APECO1_RS05320 65fa17bfaf6735c35e95c8684a4b9096 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 5.4E-151 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APECO1_RS05320 65fa17bfaf6735c35e95c8684a4b9096 306 PANTHER PTHR30606:SF5 2 306 8.0E-188 T 22-04-2016 APECO1_RS05320 65fa17bfaf6735c35e95c8684a4b9096 306 PANTHER PTHR30606 2 306 8.0E-188 T 22-04-2016 APECO1_RS05320 65fa17bfaf6735c35e95c8684a4b9096 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 52.016 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APECO1_RS05320 65fa17bfaf6735c35e95c8684a4b9096 306 PIRSF PIRSF026649 2 306 1.3E-113 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APECO1_RS05320 65fa17bfaf6735c35e95c8684a4b9096 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 2.1E-122 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APECO1_RS18325 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 7.77E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APECO1_RS18325 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.77E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APECO1_RS18325 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 7.77E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APECO1_RS18325 c9d64c9174aefb2a599ee9a9f81fde03 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.77E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APECO1_RS18325 c9d64c9174aefb2a599ee9a9f81fde03 110 PANTHER PTHR34182 2 109 2.3E-35 T 22-04-2016 APECO1_RS18325 c9d64c9174aefb2a599ee9a9f81fde03 110 Pfam PF03840 Preprotein translocase SecG subunit 5 72 2.2E-21 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APECO1_RS18325 c9d64c9174aefb2a599ee9a9f81fde03 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 1.4E-26 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 PANTHER PTHR18895:SF66 4 308 4.9E-192 T 22-04-2016 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 Pfam PF05175 Methyltransferase small domain 132 215 2.6E-16 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 PIRSF PIRSF037167 1 307 3.2E-151 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 Gene3D G3DSA:1.10.8.10 15 106 1.0E-6 T 22-04-2016 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 PANTHER PTHR18895 4 308 4.9E-192 T 22-04-2016 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.742 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 1.7E-139 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 305 2.2E-110 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 SUPERFAMILY SSF53335 15 293 2.76E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS12935 f15fefe047982278d47e44c2365339b7 310 Gene3D G3DSA:3.40.50.150 108 289 3.1E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 Gene3D G3DSA:3.30.499.10 2 158 1.0E-23 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 SUPERFAMILY SSF53732 2 464 5.1E-168 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.866 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 5.8E-284 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 2.0E-156 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PANTHER PTHR11670 1 307 4.8E-277 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PANTHER PTHR11670 327 466 4.8E-277 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 Gene3D G3DSA:3.40.1060.10 166 279 9.9E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 195 208 3.5E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 119 132 3.5E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 343 354 3.5E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 82 95 3.5E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 108 116 3.5E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 399 412 3.5E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 133 148 3.5E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 286 300 3.5E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PRINTS PR00415 Aconitase family signature 209 222 3.5E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PANTHER PTHR11670:SF38 1 307 4.8E-277 T 22-04-2016 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 PANTHER PTHR11670:SF38 327 466 4.8E-277 T 22-04-2016 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS00400 4d42f5f16566dbb9e6cade35cf385fe1 466 Gene3D G3DSA:3.30.499.10 335 465 2.8E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 Pfam PF13416 Bacterial extracellular solute-binding protein 62 340 1.9E-22 T 22-04-2016 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 SUPERFAMILY SSF53850 32 385 3.37E-33 T 22-04-2016 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 Gene3D G3DSA:3.40.190.10 314 352 2.5E-16 T 22-04-2016 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 Gene3D G3DSA:3.40.190.10 31 151 2.5E-16 T 22-04-2016 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 PANTHER PTHR30006:SF12 1 206 4.6E-196 T 22-04-2016 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 PANTHER PTHR30006:SF12 224 388 4.6E-196 T 22-04-2016 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 PANTHER PTHR30006 1 206 4.6E-196 T 22-04-2016 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 PANTHER PTHR30006 224 388 4.6E-196 T 22-04-2016 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 Gene3D G3DSA:3.40.190.10 155 313 3.5E-6 T 22-04-2016 APECO1_RS09400 09bbecabe69e4c88829084d331fe4366 388 PIRSF PIRSF029172 1 388 1.5E-184 T 22-04-2016 IPR027020 Protein ynjB APECO1_RS11875 3e7b98b28389718e51f16680b6c6813a 667 Pfam PF04434 SWIM zinc finger 64 88 0.01 T 22-04-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 APECO1_RS11875 3e7b98b28389718e51f16680b6c6813a 667 Pfam PF04434 SWIM zinc finger 160 184 0.083 T 22-04-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 APECO1_RS10065 2743f67b48ad68f4b8bd3b756683bfac 214 PANTHER PTHR22617:SF32 16 214 7.3E-141 T 22-04-2016 APECO1_RS10065 2743f67b48ad68f4b8bd3b756683bfac 214 PANTHER PTHR22617 16 214 7.3E-141 T 22-04-2016 APECO1_RS10065 2743f67b48ad68f4b8bd3b756683bfac 214 SUPERFAMILY SSF75708 11 213 1.12E-66 T 22-04-2016 APECO1_RS10065 2743f67b48ad68f4b8bd3b756683bfac 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 214 2.4E-77 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- APECO1_RS10065 2743f67b48ad68f4b8bd3b756683bfac 214 PIRSF PIRSF002884 2 214 6.6E-89 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- APECO1_RS10065 2743f67b48ad68f4b8bd3b756683bfac 214 Gene3D G3DSA:1.10.287.500 35 167 3.8E-56 T 22-04-2016 APECO1_RS10065 2743f67b48ad68f4b8bd3b756683bfac 214 Gene3D G3DSA:1.20.5.590 1 34 2.5E-23 T 22-04-2016 APECO1_RS05630 244f900a709d08330dbbbe6a157ce87b 399 Pfam PF02687 FtsX-like permease family 270 392 4.5E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APECO1_RS05630 244f900a709d08330dbbbe6a157ce87b 399 PANTHER PTHR30489 1 399 3.9E-252 T 22-04-2016 APECO1_RS05630 244f900a709d08330dbbbe6a157ce87b 399 Gene3D G3DSA:2.40.40.20 132 164 3.7E-4 T 22-04-2016 APECO1_RS05630 244f900a709d08330dbbbe6a157ce87b 399 PANTHER PTHR30489:SF8 1 399 3.9E-252 T 22-04-2016 APECO1_RS05630 244f900a709d08330dbbbe6a157ce87b 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 4.0E-148 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 APECO1_RS05630 244f900a709d08330dbbbe6a157ce87b 399 Pfam PF12704 MacB-like periplasmic core domain 27 205 1.9E-13 T 22-04-2016 IPR025857 MacB-like periplasmic core domain APECO1_RS20905 fbd7bc8484547ea06c30060fec6b0575 156 Gene3D G3DSA:3.40.930.10 1 150 4.1E-46 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS20905 fbd7bc8484547ea06c30060fec6b0575 156 SUPERFAMILY SSF55804 1 149 2.35E-36 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS20905 fbd7bc8484547ea06c30060fec6b0575 156 PANTHER PTHR30505 1 156 4.5E-35 T 22-04-2016 APECO1_RS20905 fbd7bc8484547ea06c30060fec6b0575 156 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 1.2E-37 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS20905 fbd7bc8484547ea06c30060fec6b0575 156 PANTHER PTHR30505:SF5 1 156 4.5E-35 T 22-04-2016 APECO1_RS20905 fbd7bc8484547ea06c30060fec6b0575 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 2.1E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 PANTHER PTHR24095:SF123 15 519 2.0E-263 T 22-04-2016 APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 Gene3D G3DSA:3.30.300.30 417 519 6.0E-26 T 22-04-2016 APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 SUPERFAMILY SSF56801 10 518 2.75E-125 T 22-04-2016 APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 PANTHER PTHR24095 15 519 2.0E-263 T 22-04-2016 APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 1.3E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 Gene3D G3DSA:3.40.50.980 16 178 2.8E-25 T 22-04-2016 APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 Pfam PF00501 AMP-binding enzyme 21 422 1.5E-77 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 Gene3D G3DSA:2.30.38.10 341 416 3.1E-21 T 22-04-2016 APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS10870 b10b9d7171d2640ca99396b7225e6fdc 525 Gene3D G3DSA:3.40.50.980 179 330 2.9E-37 T 22-04-2016 APECO1_RS18875 21feef35010de9fae22772d733eada64 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 33.106 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS18875 21feef35010de9fae22772d733eada64 272 PANTHER PTHR21089:SF2 1 270 3.9E-161 T 22-04-2016 APECO1_RS18875 21feef35010de9fae22772d733eada64 272 Gene3D G3DSA:3.40.192.10 2 107 2.6E-38 T 22-04-2016 APECO1_RS18875 21feef35010de9fae22772d733eada64 272 SUPERFAMILY SSF51735 102 269 1.03E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18875 21feef35010de9fae22772d733eada64 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 190 7.2E-9 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APECO1_RS18875 21feef35010de9fae22772d733eada64 272 PANTHER PTHR21089 1 270 3.9E-161 T 22-04-2016 APECO1_RS18875 21feef35010de9fae22772d733eada64 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 1.2E-23 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS18875 21feef35010de9fae22772d733eada64 272 SUPERFAMILY SSF53223 2 101 1.96E-32 T 22-04-2016 APECO1_RS18875 21feef35010de9fae22772d733eada64 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 4.1E-111 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS18875 21feef35010de9fae22772d733eada64 272 Gene3D G3DSA:3.40.50.720 108 244 1.9E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 7.2E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 7.2E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 7.2E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 7.2E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 7.2E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 Pfam PF11940 Domain of unknown function (DUF3458) 459 827 3.0E-137 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 SUPERFAMILY SSF55486 204 450 1.19E-75 T 22-04-2016 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 Pfam PF01433 Peptidase family M1 105 384 4.2E-70 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 PANTHER PTHR11533 609 869 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 PANTHER PTHR11533 10 586 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 PANTHER PTHR11533:SF152 609 869 0.0 T 22-04-2016 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 PANTHER PTHR11533:SF152 10 586 0.0 T 22-04-2016 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 SUPERFAMILY SSF63737 1 193 3.14E-46 T 22-04-2016 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 Gene3D G3DSA:1.10.390.10 308 451 6.5E-36 T 22-04-2016 APECO1_RS04775 d76f16fe107ec5fbd36307d640867966 870 Gene3D G3DSA:1.25.50.10 547 870 1.5E-125 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal APECO1_RS13890 39aab3d6cc24247e6e5dc145d173a748 487 Pfam PF14559 Tetratricopeptide repeat 354 418 2.3E-10 T 22-04-2016 APECO1_RS13890 39aab3d6cc24247e6e5dc145d173a748 487 PANTHER PTHR22726:SF10 1 351 4.1E-147 T 22-04-2016 APECO1_RS13890 39aab3d6cc24247e6e5dc145d173a748 487 Gene3D G3DSA:3.30.2010.10 68 150 1.3E-15 T 22-04-2016 APECO1_RS13890 39aab3d6cc24247e6e5dc145d173a748 487 PANTHER PTHR22726 1 351 4.1E-147 T 22-04-2016 APECO1_RS13890 39aab3d6cc24247e6e5dc145d173a748 487 SUPERFAMILY SSF48452 313 428 1.52E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS13890 39aab3d6cc24247e6e5dc145d173a748 487 Gene3D G3DSA:1.25.40.10 310 453 1.8E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS13890 39aab3d6cc24247e6e5dc145d173a748 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 482 32.591 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 APECO1_RS13890 39aab3d6cc24247e6e5dc145d173a748 487 Pfam PF01435 Peptidase family M48 72 259 3.5E-26 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APECO1_RS16510 912a1f6aa60db4537a2441829e44c8b3 200 PANTHER PTHR23407:SF1 4 200 7.2E-71 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APECO1_RS16510 912a1f6aa60db4537a2441829e44c8b3 200 SUPERFAMILY SSF100950 12 200 1.31E-56 T 22-04-2016 APECO1_RS16510 912a1f6aa60db4537a2441829e44c8b3 200 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 13 194 3.0E-53 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APECO1_RS16510 912a1f6aa60db4537a2441829e44c8b3 200 PANTHER PTHR23407 4 200 7.2E-71 T 22-04-2016 APECO1_RS16510 912a1f6aa60db4537a2441829e44c8b3 200 Gene3D G3DSA:3.40.50.10420 13 199 1.3E-60 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APECO1_RS16510 912a1f6aa60db4537a2441829e44c8b3 200 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 13 194 7.4E-45 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APECO1_RS16510 912a1f6aa60db4537a2441829e44c8b3 200 PIRSF PIRSF006806 9 197 2.7E-36 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 2.7E-238 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 PANTHER PTHR11632:SF27 2 522 2.4E-272 T 22-04-2016 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.0E-10 T 22-04-2016 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.0E-10 T 22-04-2016 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 SUPERFAMILY SSF46977 425 522 2.22E-31 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 Gene3D G3DSA:1.20.58.100 420 521 2.5E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 PANTHER PTHR11632 2 522 2.4E-272 T 22-04-2016 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 SUPERFAMILY SSF56425 238 353 1.08E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 Gene3D G3DSA:3.50.50.60 349 409 1.0E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 Gene3D G3DSA:3.50.50.60 3 243 1.0E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 Gene3D G3DSA:3.90.700.10 244 348 3.1E-37 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 5.6E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 6.7E-5 T 22-04-2016 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 6.7E-5 T 22-04-2016 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 Pfam PF00890 FAD binding domain 10 392 3.4E-105 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 SUPERFAMILY SSF51905 356 447 2.1E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS14555 e380f63f7d93524a75bbcfb2675af20a 540 SUPERFAMILY SSF51905 4 255 2.1E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 1.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 1.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 1.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 SUPERFAMILY SSF75516 8 170 1.01E-35 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 Gene3D G3DSA:1.10.10.10 183 240 1.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 PANTHER PTHR26402 137 234 3.5E-38 T 22-04-2016 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 SMART SM00421 177 234 1.1E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 SUPERFAMILY SSF46894 162 240 5.1E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 8.2E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 Gene3D G3DSA:3.30.450.80 7 182 3.4E-44 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 PANTHER PTHR26402:SF432 137 234 3.5E-38 T 22-04-2016 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS10235 45e3915c66a69f9e200bbbb8977da8ea 240 Pfam PF03472 Autoinducer binding domain 23 158 1.1E-32 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PANTHER PTHR30222:SF10 1 345 2.9E-190 T 22-04-2016 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 Pfam PF13416 Bacterial extracellular solute-binding protein 42 313 5.0E-39 T 22-04-2016 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 5.3E-97 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PIRSF PIRSF019574 1 348 3.2E-135 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 Gene3D G3DSA:3.40.190.10 270 313 3.9E-65 T 22-04-2016 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 Gene3D G3DSA:3.40.190.10 26 132 3.9E-65 T 22-04-2016 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 PANTHER PTHR30222 1 345 2.9E-190 T 22-04-2016 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 Gene3D G3DSA:3.40.190.10 134 269 7.4E-26 T 22-04-2016 APECO1_RS05665 49485f7d044f118248c938a7084f0962 348 SUPERFAMILY SSF53850 27 345 6.79E-98 T 22-04-2016 APECO1_RS07035 b570bd8b39aa0632ccd9b20d4c62b7b6 349 Gene3D G3DSA:3.90.226.10 271 306 3.3E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS07035 b570bd8b39aa0632ccd9b20d4c62b7b6 349 Gene3D G3DSA:3.90.226.10 97 205 3.3E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS07035 b570bd8b39aa0632ccd9b20d4c62b7b6 349 SUPERFAMILY SSF52096 100 209 2.62E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS07035 b570bd8b39aa0632ccd9b20d4c62b7b6 349 SUPERFAMILY SSF52096 240 299 2.62E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS07035 b570bd8b39aa0632ccd9b20d4c62b7b6 349 PANTHER PTHR33209 2 349 2.7E-227 T 22-04-2016 APECO1_RS07035 b570bd8b39aa0632ccd9b20d4c62b7b6 349 Pfam PF08496 Peptidase family S49 N-terminal 2 158 2.7E-62 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 APECO1_RS07035 b570bd8b39aa0632ccd9b20d4c62b7b6 349 Pfam PF01343 Peptidase family S49 161 310 5.5E-51 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APECO1_RS07035 b570bd8b39aa0632ccd9b20d4c62b7b6 349 PANTHER PTHR33209:SF2 2 349 2.7E-227 T 22-04-2016 APECO1_RS07195 936698c9ce7a91f2a50234b6f32755d5 321 PANTHER PTHR30465:SF65 1 147 1.8E-192 T 22-04-2016 APECO1_RS07195 936698c9ce7a91f2a50234b6f32755d5 321 PANTHER PTHR30465:SF65 172 315 1.8E-192 T 22-04-2016 APECO1_RS07195 936698c9ce7a91f2a50234b6f32755d5 321 Gene3D G3DSA:1.10.3720.10 72 141 2.5E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07195 936698c9ce7a91f2a50234b6f32755d5 321 Gene3D G3DSA:1.10.3720.10 181 305 2.5E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07195 936698c9ce7a91f2a50234b6f32755d5 321 PANTHER PTHR30465 1 147 1.8E-192 T 22-04-2016 APECO1_RS07195 936698c9ce7a91f2a50234b6f32755d5 321 PANTHER PTHR30465 172 315 1.8E-192 T 22-04-2016 APECO1_RS07195 936698c9ce7a91f2a50234b6f32755d5 321 SUPERFAMILY SSF161098 72 138 5.63E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07195 936698c9ce7a91f2a50234b6f32755d5 321 SUPERFAMILY SSF161098 178 300 5.63E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07195 936698c9ce7a91f2a50234b6f32755d5 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 3.7E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS05940 326c6b8ad45ffeed3a4fbdc76358461d 97 Pfam PF06291 Bor protein 1 97 3.1E-61 T 22-04-2016 IPR010438 Bor GO:0009279 APECO1_RS05940 326c6b8ad45ffeed3a4fbdc76358461d 97 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 96 1.0E-50 T 22-04-2016 IPR010438 Bor GO:0009279 APECO1_RS09670 d4ca49921776bfd340b13ce348d80fc9 114 PANTHER PTHR11803 8 114 1.9E-32 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APECO1_RS09670 d4ca49921776bfd340b13ce348d80fc9 114 SUPERFAMILY SSF55298 5 114 5.18E-27 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APECO1_RS09670 d4ca49921776bfd340b13ce348d80fc9 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 22-04-2016 IPR019897 RidA, conserved site APECO1_RS09670 d4ca49921776bfd340b13ce348d80fc9 114 Gene3D G3DSA:3.30.1330.40 6 113 3.5E-20 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APECO1_RS09670 d4ca49921776bfd340b13ce348d80fc9 114 Pfam PF01042 Endoribonuclease L-PSP 4 114 2.8E-28 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 PANTHER PTHR30081 224 282 9.8E-241 T 22-04-2016 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 6.0E-84 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 Gene3D G3DSA:1.20.1640.10 443 610 3.6E-25 T 22-04-2016 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 PANTHER PTHR30081 1 173 9.8E-241 T 22-04-2016 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 PANTHER PTHR30081 313 613 9.8E-241 T 22-04-2016 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 Pfam PF02355 Protein export membrane protein 433 601 2.0E-15 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 SUPERFAMILY SSF82866 337 349 2.35E-40 T 22-04-2016 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 SUPERFAMILY SSF82866 410 606 2.35E-40 T 22-04-2016 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 614 47.236 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 PANTHER PTHR30081:SF1 224 282 9.8E-241 T 22-04-2016 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 PANTHER PTHR30081:SF1 1 173 9.8E-241 T 22-04-2016 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 PANTHER PTHR30081:SF1 313 613 9.8E-241 T 22-04-2016 APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 Pfam PF07549 SecD/SecF GG Motif 120 140 5.0E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 7.6E-38 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain APECO1_RS02075 be93a420e442caf6510839e8e8943f61 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 2.4E-151 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APECO1_RS19580 9e3f4c56553813270661106dc87ae712 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.37 T 22-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APECO1_RS19580 9e3f4c56553813270661106dc87ae712 108 SUPERFAMILY SSF52821 1 100 4.19E-27 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS19580 9e3f4c56553813270661106dc87ae712 108 Pfam PF00581 Rhodanese-like domain 11 98 2.6E-13 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS19580 9e3f4c56553813270661106dc87ae712 108 Gene3D G3DSA:3.40.250.10 2 101 1.2E-29 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS19580 9e3f4c56553813270661106dc87ae712 108 SMART SM00450 7 102 1.6E-19 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS22870 f14b8e4d8297c739f6ef0d2c586ddac9 147 Pfam PF13673 Acetyltransferase (GNAT) domain 38 131 3.2E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS22870 f14b8e4d8297c739f6ef0d2c586ddac9 147 PANTHER PTHR23091:SF277 1 129 1.3E-56 T 22-04-2016 APECO1_RS22870 f14b8e4d8297c739f6ef0d2c586ddac9 147 PANTHER PTHR23091 1 129 1.3E-56 T 22-04-2016 APECO1_RS22870 f14b8e4d8297c739f6ef0d2c586ddac9 147 SUPERFAMILY SSF55729 3 139 1.06E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS22870 f14b8e4d8297c739f6ef0d2c586ddac9 147 Gene3D G3DSA:3.40.630.30 1 141 4.4E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS11360 6b1031f7bbe7340caa5a18e8dbcdfe77 464 PANTHER PTHR30576 1 464 1.4E-226 T 22-04-2016 APECO1_RS11360 6b1031f7bbe7340caa5a18e8dbcdfe77 464 Pfam PF13727 CoA-binding domain 65 238 6.5E-39 T 22-04-2016 APECO1_RS11360 6b1031f7bbe7340caa5a18e8dbcdfe77 464 Pfam PF02397 Bacterial sugar transferase 274 456 2.0E-58 T 22-04-2016 IPR003362 Bacterial sugar transferase APECO1_RS11360 6b1031f7bbe7340caa5a18e8dbcdfe77 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 464 1.2E-164 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 APECO1_RS11360 6b1031f7bbe7340caa5a18e8dbcdfe77 464 PANTHER PTHR30576:SF0 1 464 1.4E-226 T 22-04-2016 APECO1_RS11360 6b1031f7bbe7340caa5a18e8dbcdfe77 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 24 464 2.9E-150 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APECO1_RS16540 3550da0e2020e0d3bb1fc8ac2f561089 298 PANTHER PTHR30579:SF0 1 294 6.8E-97 T 22-04-2016 APECO1_RS16540 3550da0e2020e0d3bb1fc8ac2f561089 298 Pfam PF03466 LysR substrate binding domain 91 281 7.1E-9 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS16540 3550da0e2020e0d3bb1fc8ac2f561089 298 PANTHER PTHR30579 1 294 6.8E-97 T 22-04-2016 APECO1_RS16540 3550da0e2020e0d3bb1fc8ac2f561089 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.6E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS16540 3550da0e2020e0d3bb1fc8ac2f561089 298 SUPERFAMILY SSF46785 8 87 7.62E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS16540 3550da0e2020e0d3bb1fc8ac2f561089 298 SUPERFAMILY SSF53850 104 283 1.09E-11 T 22-04-2016 APECO1_RS16540 3550da0e2020e0d3bb1fc8ac2f561089 298 Gene3D G3DSA:1.10.10.10 7 87 9.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS00250 25c176104b8a298c5e47bbc96315ab21 95 SUPERFAMILY SSF54862 40 90 2.99E-8 T 22-04-2016 APECO1_RS00250 25c176104b8a298c5e47bbc96315ab21 95 Gene3D G3DSA:3.30.70.20 40 69 1.8E-5 T 22-04-2016 APECO1_RS00250 25c176104b8a298c5e47bbc96315ab21 95 PANTHER PTHR10617 1 80 1.8E-37 T 22-04-2016 APECO1_RS00250 25c176104b8a298c5e47bbc96315ab21 95 PIRSF PIRSF036548 1 95 6.8E-39 T 22-04-2016 IPR012206 Ferredoxin-like, FixX GO:0005506 APECO1_RS00250 25c176104b8a298c5e47bbc96315ab21 95 PANTHER PTHR10617:SF112 1 80 1.8E-37 T 22-04-2016 APECO1_RS04900 c225940f952b785aedb213a2047398d7 152 PANTHER PTHR30492 2 151 8.2E-91 T 22-04-2016 APECO1_RS04900 c225940f952b785aedb213a2047398d7 152 SMART SM00851 25 118 6.7E-24 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS04900 c225940f952b785aedb213a2047398d7 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 2.0E-74 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APECO1_RS04900 c225940f952b785aedb213a2047398d7 152 SUPERFAMILY SSF52335 2 147 8.24E-59 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS04900 c225940f952b785aedb213a2047398d7 152 Pfam PF02142 MGS-like domain 26 118 2.7E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS04900 c225940f952b785aedb213a2047398d7 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APECO1_RS04900 c225940f952b785aedb213a2047398d7 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 41.132 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APECO1_RS04900 c225940f952b785aedb213a2047398d7 152 PIRSF PIRSF006614 8 151 5.5E-66 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APECO1_RS04900 c225940f952b785aedb213a2047398d7 152 Gene3D G3DSA:3.40.50.1380 2 151 5.3E-66 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APECO1_RS00740 7e30feb731ef0e64d21e7d3e915f64e7 198 SUPERFAMILY SSF49401 31 198 5.47E-11 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS00740 7e30feb731ef0e64d21e7d3e915f64e7 198 Pfam PF00419 Fimbrial protein 35 197 7.0E-8 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS00740 7e30feb731ef0e64d21e7d3e915f64e7 198 Gene3D G3DSA:2.60.40.1090 31 198 1.5E-9 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.1E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.1E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.1E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.1E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.1E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.1E-68 T 22-04-2016 APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.2E-102 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 Gene3D G3DSA:3.40.50.720 2 243 7.5E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PANTHER PTHR24322 151 183 1.2E-81 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PANTHER PTHR24322 10 135 1.2E-81 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PANTHER PTHR24322:SF635 151 183 1.2E-81 T 22-04-2016 APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 PANTHER PTHR24322:SF635 10 135 1.2E-81 T 22-04-2016 APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 SUPERFAMILY SSF51735 4 243 1.14E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 9.2E-6 T 22-04-2016 APECO1_RS05515 c22a193608c9d8f2f5ee499e05b45f4b 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:3.30.70.20 138 172 6.6E-15 T 22-04-2016 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 PANTHER PTHR11938:SF84 1 204 5.9E-160 T 22-04-2016 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:3.30.70.20 104 137 2.1E-11 T 22-04-2016 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 PIRSF PIRSF036298 1 300 7.1E-166 T 22-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:3.30.70.20 30 103 8.5E-37 T 22-04-2016 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:3.30.70.20 173 227 8.5E-37 T 22-04-2016 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 1.3E-144 T 22-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 8.3E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 Gene3D G3DSA:1.20.5.480 247 294 1.9E-26 T 22-04-2016 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 PANTHER PTHR11938 1 204 5.9E-160 T 22-04-2016 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 SUPERFAMILY SSF54862 28 271 6.38E-72 T 22-04-2016 APECO1_RS22225 e5a904638cb9b4a8bcc407cc8b46856c 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 4.3E-21 T 22-04-2016 IPR015246 Formate dehydrogenase, transmembrane APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 PANTHER PTHR11476 2 424 7.5E-242 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Pfam PF03129 Anticodon binding domain 340 420 4.2E-10 T 22-04-2016 IPR004154 Anticodon-binding APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 SUPERFAMILY SSF52954 329 423 3.11E-25 T 22-04-2016 IPR004154 Anticodon-binding APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.3E-47 T 22-04-2016 APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 1.3E-157 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Gene3D G3DSA:3.30.930.10 221 320 2.9E-99 T 22-04-2016 APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Gene3D G3DSA:3.30.930.10 4 185 2.9E-99 T 22-04-2016 APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 SUPERFAMILY SSF55681 5 318 4.98E-106 T 22-04-2016 APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.833 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 Gene3D G3DSA:3.40.50.800 328 422 1.2E-32 T 22-04-2016 IPR004154 Anticodon-binding APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 PIRSF PIRSF001549 2 423 3.6E-131 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APECO1_RS14270 7d9ad7e30bb9a30d39ffeb201479cf1e 424 PANTHER PTHR11476:SF9 2 424 7.5E-242 T 22-04-2016 APECO1_RS12955 b52541c4fc5686d23e75c273849fc45c 175 SUPERFAMILY SSF49401 27 174 1.39E-28 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS12955 b52541c4fc5686d23e75c273849fc45c 175 PANTHER PTHR33420 22 175 2.6E-86 T 22-04-2016 APECO1_RS12955 b52541c4fc5686d23e75c273849fc45c 175 Gene3D G3DSA:2.60.40.1090 27 174 3.9E-34 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS12955 b52541c4fc5686d23e75c273849fc45c 175 PANTHER PTHR33420:SF9 22 175 2.6E-86 T 22-04-2016 APECO1_RS12955 b52541c4fc5686d23e75c273849fc45c 175 Pfam PF00419 Fimbrial protein 30 174 2.6E-19 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS08915 6a663e41d5a28c7acd663cce9cef41ba 382 SUPERFAMILY SSF53335 117 373 4.53E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS08915 6a663e41d5a28c7acd663cce9cef41ba 382 PANTHER PTHR10108 49 289 3.8E-113 T 22-04-2016 APECO1_RS08915 6a663e41d5a28c7acd663cce9cef41ba 382 PANTHER PTHR10108 305 372 3.8E-113 T 22-04-2016 APECO1_RS08915 6a663e41d5a28c7acd663cce9cef41ba 382 PANTHER PTHR10108:SF795 49 289 3.8E-113 T 22-04-2016 APECO1_RS08915 6a663e41d5a28c7acd663cce9cef41ba 382 PANTHER PTHR10108:SF795 305 372 3.8E-113 T 22-04-2016 APECO1_RS08915 6a663e41d5a28c7acd663cce9cef41ba 382 PIRSF PIRSF003085 2 381 2.8E-130 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 APECO1_RS08915 6a663e41d5a28c7acd663cce9cef41ba 382 Gene3D G3DSA:3.40.50.150 117 371 7.6E-96 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS08915 6a663e41d5a28c7acd663cce9cef41ba 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 3.2E-106 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06540 29dc561619f62017f4469f57c4297a96 337 PANTHER PTHR26402 8 152 9.8E-104 T 22-04-2016 APECO1_RS06540 29dc561619f62017f4469f57c4297a96 337 SUPERFAMILY SSF52172 8 144 7.83E-32 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS06540 29dc561619f62017f4469f57c4297a96 337 Pfam PF00072 Response regulator receiver domain 10 120 4.9E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS06540 29dc561619f62017f4469f57c4297a96 337 Gene3D G3DSA:3.40.50.2300 7 124 2.3E-30 T 22-04-2016 APECO1_RS06540 29dc561619f62017f4469f57c4297a96 337 SMART SM00448 8 120 7.6E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS06540 29dc561619f62017f4469f57c4297a96 337 PANTHER PTHR26402:SF554 8 152 9.8E-104 T 22-04-2016 APECO1_RS06540 29dc561619f62017f4469f57c4297a96 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 55.035 T 22-04-2016 IPR028616 Regulator of RpoS APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 147 1.4E-71 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 6.3E-58 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 1.1E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.1E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 1.1E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 1.1E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 PANTHER PTHR36918 6 155 3.6E-92 T 22-04-2016 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 PANTHER PTHR36918:SF1 6 155 3.6E-92 T 22-04-2016 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 SUPERFAMILY SSF54611 10 142 1.2E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 Gene3D G3DSA:3.10.420.10 2 151 3.6E-65 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APECO1_RS20655 82d218d455a27c5acdf11662265cd47e 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.552 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APECO1_RS04770 d1a3eda72d49a27dafb1174a368d487c 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 51.178 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APECO1_RS04770 d1a3eda72d49a27dafb1174a368d487c 400 SUPERFAMILY SSF51690 120 392 4.51E-87 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APECO1_RS04770 d1a3eda72d49a27dafb1174a368d487c 400 Gene3D G3DSA:3.20.140.10 3 376 2.6E-146 T 22-04-2016 APECO1_RS04770 d1a3eda72d49a27dafb1174a368d487c 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 3.5E-187 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APECO1_RS04770 d1a3eda72d49a27dafb1174a368d487c 400 SUPERFAMILY SSF54675 2 138 7.06E-44 T 22-04-2016 APECO1_RS04770 d1a3eda72d49a27dafb1174a368d487c 400 PANTHER PTHR11098 1 396 1.4E-299 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APECO1_RS04770 d1a3eda72d49a27dafb1174a368d487c 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 5.4E-85 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APECO1_RS04770 d1a3eda72d49a27dafb1174a368d487c 400 PANTHER PTHR11098:SF14 1 396 1.4E-299 T 22-04-2016 APECO1_RS04770 d1a3eda72d49a27dafb1174a368d487c 400 PIRSF PIRSF000484 1 397 2.6E-62 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APECO1_RS20330 c9bd990a626f03ec26b1ee190fd27dfa 535 Gene3D G3DSA:3.10.105.10 288 505 5.6E-69 T 22-04-2016 APECO1_RS20330 c9bd990a626f03ec26b1ee190fd27dfa 535 PANTHER PTHR30290 1 535 6.3E-237 T 22-04-2016 APECO1_RS20330 c9bd990a626f03ec26b1ee190fd27dfa 535 PIRSF PIRSF002741 21 535 8.6E-122 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APECO1_RS20330 c9bd990a626f03ec26b1ee190fd27dfa 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site APECO1_RS20330 c9bd990a626f03ec26b1ee190fd27dfa 535 PANTHER PTHR30290:SF14 1 535 6.3E-237 T 22-04-2016 APECO1_RS20330 c9bd990a626f03ec26b1ee190fd27dfa 535 SUPERFAMILY SSF53850 29 534 3.26E-163 T 22-04-2016 APECO1_RS20330 c9bd990a626f03ec26b1ee190fd27dfa 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 2.1E-108 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS20330 c9bd990a626f03ec26b1ee190fd27dfa 535 Gene3D G3DSA:3.90.76.10 39 219 4.1E-50 T 22-04-2016 APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 SMART SM00487 20 223 9.1E-64 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 PANTHER PTHR24031:SF0 1 449 3.2E-197 T 22-04-2016 APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 449 52.498 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 SMART SM00490 259 340 7.6E-32 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 PANTHER PTHR24031 1 449 3.2E-197 T 22-04-2016 APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 Pfam PF00271 Helicase conserved C-terminal domain 237 339 6.7E-26 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 Gene3D G3DSA:3.40.50.300 1 213 2.3E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 SUPERFAMILY SSF52540 75 361 4.65E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 Pfam PF00270 DEAD/DEAH box helicase 25 196 3.0E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS03865 a9b7f22de96753334a4cd88071b130cf 453 Gene3D G3DSA:3.40.50.300 214 372 1.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 240 259 2.7E-115 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 2.7E-115 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 2.7E-115 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 2.7E-115 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 270 293 2.7E-115 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 2.7E-115 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 2.7E-115 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 2.7E-115 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 SUPERFAMILY SSF111364 32 294 5.23E-90 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 294 7.3E-85 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS02090 fda8521c77530422aa3d0d033937b099 294 Gene3D G3DSA:2.40.230.20 25 294 5.6E-106 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS00825 09b7fc58e2e903b2589560f5695caabe 660 SUPERFAMILY SSF81345 6 325 4.05E-59 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS00825 09b7fc58e2e903b2589560f5695caabe 660 Pfam PF01032 FecCD transport family 11 323 1.9E-63 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS00825 09b7fc58e2e903b2589560f5695caabe 660 Pfam PF01032 FecCD transport family 359 657 5.8E-75 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS00825 09b7fc58e2e903b2589560f5695caabe 660 SUPERFAMILY SSF81345 345 657 4.71E-73 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS00825 09b7fc58e2e903b2589560f5695caabe 660 PANTHER PTHR30472 244 660 1.5E-218 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS00825 09b7fc58e2e903b2589560f5695caabe 660 Gene3D G3DSA:1.10.3470.10 341 659 4.0E-83 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS00825 09b7fc58e2e903b2589560f5695caabe 660 Gene3D G3DSA:1.10.3470.10 7 327 7.5E-74 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS00825 09b7fc58e2e903b2589560f5695caabe 660 PANTHER PTHR30472:SF16 244 660 1.5E-218 T 22-04-2016 APECO1_RS07235 675ccb2af065ae7e3eaf2dde35a9b808 119 PANTHER PTHR33885 1 119 8.8E-38 T 22-04-2016 APECO1_RS07235 675ccb2af065ae7e3eaf2dde35a9b808 119 Pfam PF04024 PspC domain 8 65 2.7E-15 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal APECO1_RS07235 675ccb2af065ae7e3eaf2dde35a9b808 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 2.0E-40 T 22-04-2016 IPR014320 Phage shock protein, PspC APECO1_RS23200 6efa79d2423305d66975445273869246 606 SUPERFAMILY SSF55874 439 600 9.43E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23200 6efa79d2423305d66975445273869246 606 Gene3D G3DSA:3.30.565.10 457 599 4.5E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23200 6efa79d2423305d66975445273869246 606 Gene3D G3DSA:1.10.287.130 381 447 1.4E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PIRSF PIRSF036431 1 606 3.3E-214 T 22-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) APECO1_RS23200 6efa79d2423305d66975445273869246 606 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 600 1.7E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23200 6efa79d2423305d66975445273869246 606 Pfam PF02743 Cache domain 49 234 8.4E-15 T 22-04-2016 IPR033479 Double Cache domain 1 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PANTHER PTHR24423:SF469 328 596 4.9E-58 T 22-04-2016 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PANTHER PTHR24423:SF469 183 235 4.9E-58 T 22-04-2016 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PANTHER PTHR24423:SF469 128 147 4.9E-58 T 22-04-2016 APECO1_RS23200 6efa79d2423305d66975445273869246 606 SUPERFAMILY SSF103190 67 192 5.3E-22 T 22-04-2016 IPR029151 Periplasmic sensor domain-like APECO1_RS23200 6efa79d2423305d66975445273869246 606 Pfam PF00512 His Kinase A (phospho-acceptor) domain 384 448 2.1E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS23200 6efa79d2423305d66975445273869246 606 SMART SM00387 494 602 9.2E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS23200 6efa79d2423305d66975445273869246 606 SUPERFAMILY SSF47384 380 447 8.24E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PANTHER PTHR24423 328 596 4.9E-58 T 22-04-2016 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PANTHER PTHR24423 183 235 4.9E-58 T 22-04-2016 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PANTHER PTHR24423 128 147 4.9E-58 T 22-04-2016 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 5.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 5.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 5.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS23200 6efa79d2423305d66975445273869246 606 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 5.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS23200 6efa79d2423305d66975445273869246 606 Gene3D G3DSA:3.30.450.20 97 182 5.0E-9 T 22-04-2016 APECO1_RS11920 2a6e11055eed6eac7d307378413f11f4 385 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 375 7.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS11920 2a6e11055eed6eac7d307378413f11f4 385 PANTHER PTHR30177 89 383 3.9E-200 T 22-04-2016 APECO1_RS11920 2a6e11055eed6eac7d307378413f11f4 385 SUPERFAMILY SSF161098 173 371 8.37E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS11920 2a6e11055eed6eac7d307378413f11f4 385 Gene3D G3DSA:1.10.3720.10 166 367 1.4E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS11920 2a6e11055eed6eac7d307378413f11f4 385 PANTHER PTHR30177:SF8 89 383 3.9E-200 T 22-04-2016 APECO1_RS13350 58e8d45fb9ce6319980f596a092eacad 512 PANTHER PTHR23501:SF52 8 505 5.3E-284 T 22-04-2016 APECO1_RS13350 58e8d45fb9ce6319980f596a092eacad 512 Pfam PF07690 Major Facilitator Superfamily 23 417 1.1E-51 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS13350 58e8d45fb9ce6319980f596a092eacad 512 PANTHER PTHR23501 8 505 5.3E-284 T 22-04-2016 APECO1_RS13350 58e8d45fb9ce6319980f596a092eacad 512 Gene3D G3DSA:1.20.1250.20 270 505 4.9E-18 T 22-04-2016 APECO1_RS13350 58e8d45fb9ce6319980f596a092eacad 512 SUPERFAMILY SSF103473 479 504 7.06E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS13350 58e8d45fb9ce6319980f596a092eacad 512 SUPERFAMILY SSF103473 255 427 7.06E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS13350 58e8d45fb9ce6319980f596a092eacad 512 SUPERFAMILY SSF103473 7 197 7.06E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS13350 58e8d45fb9ce6319980f596a092eacad 512 Gene3D G3DSA:1.20.1250.20 17 198 1.0E-31 T 22-04-2016 APECO1_RS13350 58e8d45fb9ce6319980f596a092eacad 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 502 9.7E-172 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APECO1_RS13460 ce7477f1c88546bc57eb146c3ac5b6c1 321 Hamap MF_00524 Glucokinase [glk]. 2 316 40.249 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APECO1_RS13460 ce7477f1c88546bc57eb146c3ac5b6c1 321 SUPERFAMILY SSF53067 4 318 2.68E-64 T 22-04-2016 APECO1_RS13460 ce7477f1c88546bc57eb146c3ac5b6c1 321 Gene3D G3DSA:3.40.367.20 100 299 1.9E-78 T 22-04-2016 APECO1_RS13460 ce7477f1c88546bc57eb146c3ac5b6c1 321 PANTHER PTHR30514 1 320 1.1E-125 T 22-04-2016 APECO1_RS13460 ce7477f1c88546bc57eb146c3ac5b6c1 321 PANTHER PTHR30514:SF0 1 320 1.1E-125 T 22-04-2016 APECO1_RS13460 ce7477f1c88546bc57eb146c3ac5b6c1 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 3.6E-156 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APECO1_RS13460 ce7477f1c88546bc57eb146c3ac5b6c1 321 Pfam PF02685 Glucokinase 6 315 1.7E-123 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 Gene3D G3DSA:1.10.540.10 95 234 2.2E-32 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 Gene3D G3DSA:2.40.110.10 237 348 1.9E-17 T 22-04-2016 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 8.4E-9 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 SUPERFAMILY SSF47203 360 515 1.35E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 504 2.4E-11 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 PANTHER PTHR10909:SF321 49 531 0.0 T 22-04-2016 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 SUPERFAMILY SSF56645 117 355 1.07E-46 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 PANTHER PTHR10909 49 531 0.0 T 22-04-2016 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 Gene3D G3DSA:1.20.140.10 349 505 7.4E-23 T 22-04-2016 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 2.7E-118 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 APECO1_RS01280 91efe24cd69bf627e5fc178f19b8aa00 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 232 5.7E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 ProSitePatterns PS00216 Sugar transport proteins signature 1. 314 330 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 457 1.2E-149 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 PANTHER PTHR23500 1 470 0.0 T 22-04-2016 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 116 135 5.3E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 362 383 5.3E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 33 43 5.3E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 269 279 5.3E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 PRINTS PR00171 Sugar transporter signature 385 397 5.3E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 PANTHER PTHR23500:SF119 1 470 0.0 T 22-04-2016 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 SUPERFAMILY SSF103473 13 459 1.83E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 Pfam PF00083 Sugar (and other) transporter 26 460 7.8E-133 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 Gene3D G3DSA:1.20.1250.20 256 458 5.6E-19 T 22-04-2016 APECO1_RS16250 5022bb584c60fb95ecf25667ee394d68 472 Gene3D G3DSA:1.20.1250.20 28 208 1.7E-28 T 22-04-2016 APECO1_RS22170 bce9e6b6500e7339f70f11f42e7afe66 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 7.9E-106 T 22-04-2016 IPR017039 Virulence factor BrkB APECO1_RS22170 bce9e6b6500e7339f70f11f42e7afe66 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 281 23.392 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial APECO1_RS22170 bce9e6b6500e7339f70f11f42e7afe66 290 PANTHER PTHR30213:SF0 10 290 7.5E-112 T 22-04-2016 APECO1_RS22170 bce9e6b6500e7339f70f11f42e7afe66 290 Pfam PF03631 Virulence factor BrkB 29 274 8.7E-57 T 22-04-2016 IPR017039 Virulence factor BrkB APECO1_RS22170 bce9e6b6500e7339f70f11f42e7afe66 290 PIRSF PIRSF035875 2 290 9.3E-73 T 22-04-2016 IPR017039 Virulence factor BrkB APECO1_RS22170 bce9e6b6500e7339f70f11f42e7afe66 290 PANTHER PTHR30213 10 290 7.5E-112 T 22-04-2016 APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 PANTHER PTHR11709 52 287 5.3E-184 T 22-04-2016 APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 58.839 T 22-04-2016 IPR026589 Cell division protein FtsP GO:0043093 APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 3 165 7.37E-26 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF00394 Multicopper oxidase 223 287 3.6E-4 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF07731 Multicopper oxidase 359 468 5.4E-13 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 PANTHER PTHR11709:SF69 52 287 5.3E-184 T 22-04-2016 APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 Pfam PF07732 Multicopper oxidase 52 166 7.6E-27 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 172 310 1.39E-30 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 172 288 1.3E-30 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 357 467 3.9E-12 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 Gene3D G3DSA:2.60.40.420 32 171 1.2E-21 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 0.0015 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APECO1_RS17545 6047fd44ebb71ac06fc95cd914b8ceac 470 SUPERFAMILY SSF49503 314 466 2.22E-18 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS02100 38a74cb1c9ac64e2eec5a461bd6814cf 149 Pfam PF03477 ATP cone domain 50 136 2.6E-15 T 22-04-2016 IPR005144 ATP-cone domain APECO1_RS02100 38a74cb1c9ac64e2eec5a461bd6814cf 149 PANTHER PTHR30455:SF2 2 149 5.5E-75 T 22-04-2016 APECO1_RS02100 38a74cb1c9ac64e2eec5a461bd6814cf 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.9E-78 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APECO1_RS02100 38a74cb1c9ac64e2eec5a461bd6814cf 149 PANTHER PTHR30455 2 149 5.5E-75 T 22-04-2016 APECO1_RS02100 38a74cb1c9ac64e2eec5a461bd6814cf 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.122 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APECO1_RS17540 19095af52f0347064d2b80f30de06135 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 424 1.8E-120 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APECO1_RS17540 19095af52f0347064d2b80f30de06135 434 PANTHER PTHR33362 1 432 3.8E-227 T 22-04-2016 APECO1_RS17540 19095af52f0347064d2b80f30de06135 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 429 6.2E-155 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APECO1_RS17540 19095af52f0347064d2b80f30de06135 434 PIRSF PIRSF006066 7 434 1.2E-162 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APECO1_RS17540 19095af52f0347064d2b80f30de06135 434 PANTHER PTHR33362:SF2 1 432 3.8E-227 T 22-04-2016 APECO1_RS20660 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 4 22 3.7E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup APECO1_RS20660 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 60 73 3.7E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup APECO1_RS20660 e8c576ae9b777b43591ed7dca04bcfd9 83 PRINTS PR00160 Glutaredoxin signature 46 59 3.7E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup APECO1_RS20660 e8c576ae9b777b43591ed7dca04bcfd9 83 Gene3D G3DSA:3.40.30.10 1 73 4.2E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS20660 e8c576ae9b777b43591ed7dca04bcfd9 83 Pfam PF00462 Glutaredoxin 4 63 3.2E-24 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APECO1_RS20660 e8c576ae9b777b43591ed7dca04bcfd9 83 PANTHER PTHR10168 4 83 8.9E-31 T 22-04-2016 APECO1_RS20660 e8c576ae9b777b43591ed7dca04bcfd9 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 2.6E-37 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 APECO1_RS20660 e8c576ae9b777b43591ed7dca04bcfd9 83 SUPERFAMILY SSF52833 1 83 5.62E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS20660 e8c576ae9b777b43591ed7dca04bcfd9 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APECO1_RS09430 a4f2835ffa56d9592c74e5bc16b81292 90 Pfam PF07383 Protein of unknown function (DUF1496) 34 89 3.0E-24 T 22-04-2016 IPR009971 Protein of unknown function DUF1496 APECO1_RS10240 a1e73ce1ccc41cf94028b4fcdd78188e 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS10240 a1e73ce1ccc41cf94028b4fcdd78188e 250 SUPERFAMILY SSF52540 4 243 2.35E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10240 a1e73ce1ccc41cf94028b4fcdd78188e 250 SMART SM00382 28 221 3.2E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS10240 a1e73ce1ccc41cf94028b4fcdd78188e 250 PANTHER PTHR24220 5 248 2.8E-143 T 22-04-2016 APECO1_RS10240 a1e73ce1ccc41cf94028b4fcdd78188e 250 Pfam PF00005 ABC transporter 19 173 3.4E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS10240 a1e73ce1ccc41cf94028b4fcdd78188e 250 Gene3D G3DSA:3.40.50.300 3 245 4.8E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10240 a1e73ce1ccc41cf94028b4fcdd78188e 250 PANTHER PTHR24220:SF327 5 248 2.8E-143 T 22-04-2016 APECO1_RS10240 a1e73ce1ccc41cf94028b4fcdd78188e 250 PIRSF PIRSF039085 1 249 1.3E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APECO1_RS23335 2a5b899258b62ce3edb804411b53c179 234 SMART SM00382 28 216 4.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23335 2a5b899258b62ce3edb804411b53c179 234 Gene3D G3DSA:3.40.50.300 2 225 2.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23335 2a5b899258b62ce3edb804411b53c179 234 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS23335 2a5b899258b62ce3edb804411b53c179 234 SUPERFAMILY SSF52540 3 224 4.85E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23335 2a5b899258b62ce3edb804411b53c179 234 Pfam PF00005 ABC transporter 21 167 5.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23335 2a5b899258b62ce3edb804411b53c179 234 PANTHER PTHR24220:SF81 5 217 3.7E-89 T 22-04-2016 APECO1_RS23335 2a5b899258b62ce3edb804411b53c179 234 PANTHER PTHR24220 5 217 3.7E-89 T 22-04-2016 APECO1_RS05650 e454f8adfdbb16fee90be0163d3a14b7 273 SUPERFAMILY SSF52467 41 270 1.12E-74 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS05650 e454f8adfdbb16fee90be0163d3a14b7 273 PANTHER PTHR11085 42 269 2.1E-80 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 APECO1_RS05650 e454f8adfdbb16fee90be0163d3a14b7 273 Pfam PF02146 Sir2 family 48 221 9.5E-51 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 APECO1_RS05650 e454f8adfdbb16fee90be0163d3a14b7 273 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 41 271 62.886 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 APECO1_RS05650 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.30.1600.10 57 96 9.8E-27 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain APECO1_RS05650 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.30.1600.10 149 193 9.8E-27 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain APECO1_RS05650 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.40.50.1220 39 56 1.4E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS05650 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.40.50.1220 106 148 1.4E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS05650 e454f8adfdbb16fee90be0163d3a14b7 273 Gene3D G3DSA:3.40.50.1220 200 266 1.4E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 PIRSF PIRSF018539 1 269 1.1E-137 T 22-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 PRINTS PR01388 Cytolethal distending toxin B signature 19 40 1.6E-56 T 22-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 PRINTS PR01388 Cytolethal distending toxin B signature 94 112 1.6E-56 T 22-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 PRINTS PR01388 Cytolethal distending toxin B signature 60 80 1.6E-56 T 22-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 PRINTS PR01388 Cytolethal distending toxin B signature 185 200 1.6E-56 T 22-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 PRINTS PR01388 Cytolethal distending toxin B signature 137 156 1.6E-56 T 22-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 PRINTS PR01388 Cytolethal distending toxin B signature 247 263 1.6E-56 T 22-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 25 197 4.4E-9 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 SUPERFAMILY SSF56219 20 263 1.23E-33 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS07745 46dace2273d2aa5613ebf3978cda329b 273 Gene3D G3DSA:3.60.10.10 10 266 2.0E-107 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APECO1_RS20440 b681db84f234263768243bccd37df257 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 1.7E-220 T 22-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 53.998 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PANTHER PTHR32176:SF0 4 440 1.4E-268 T 22-04-2016 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PANTHER PTHR32176 4 440 1.4E-268 T 22-04-2016 APECO1_RS20440 b681db84f234263768243bccd37df257 440 SUPERFAMILY SSF51658 4 438 6.12E-172 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS20440 b681db84f234263768243bccd37df257 440 PRINTS PR00688 Xylose isomerase signature 271 298 4.8E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PRINTS PR00688 Xylose isomerase signature 180 201 4.8E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PRINTS PR00688 Xylose isomerase signature 207 226 4.8E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PRINTS PR00688 Xylose isomerase signature 133 153 4.8E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PRINTS PR00688 Xylose isomerase signature 333 344 4.8E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PRINTS PR00688 Xylose isomerase signature 300 311 4.8E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PRINTS PR00688 Xylose isomerase signature 229 253 4.8E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PRINTS PR00688 Xylose isomerase signature 156 175 4.8E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 PRINTS PR00688 Xylose isomerase signature 92 114 4.8E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APECO1_RS20440 b681db84f234263768243bccd37df257 440 Gene3D G3DSA:3.20.20.150 3 439 8.5E-212 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS11060 3a2ab54b9a87170d6d4e43468bbce780 68 Gene3D G3DSA:1.10.10.10 12 65 2.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11060 3a2ab54b9a87170d6d4e43468bbce780 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 59 3.2E-6 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 PANTHER PTHR11986:SF71 5 405 0.0 T 22-04-2016 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 Gene3D G3DSA:3.40.640.10 58 300 3.2E-93 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 45.327 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 SUPERFAMILY SSF53383 13 397 2.18E-128 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 401 8.4E-228 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 PANTHER PTHR11986 5 405 0.0 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 Gene3D G3DSA:3.90.1150.10 304 398 3.1E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 Gene3D G3DSA:3.90.1150.10 8 57 3.1E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 6.6E-169 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 Pfam PF00202 Aminotransferase class-III 22 395 3.2E-126 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APECO1_RS09370 2a7a96aa33d282a8d40a63233f08d18b 406 Hamap MF_01173 Succinylornithine transaminase [astC]. 1 406 76.9 T 22-04-2016 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81|UniPathway: UPA00185 APECO1_RS19960 e02d61883feeafda457f6b33f2e876ff 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 245 2.4E-45 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APECO1_RS19960 e02d61883feeafda457f6b33f2e876ff 502 PIRSF PIRSF000538 4 487 1.1E-66 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS19960 e02d61883feeafda457f6b33f2e876ff 502 PANTHER PTHR10196 1 445 1.5E-93 T 22-04-2016 APECO1_RS19960 e02d61883feeafda457f6b33f2e876ff 502 SUPERFAMILY SSF53067 8 247 7.13E-45 T 22-04-2016 APECO1_RS19960 e02d61883feeafda457f6b33f2e876ff 502 SUPERFAMILY SSF53067 252 483 4.75E-29 T 22-04-2016 APECO1_RS19960 e02d61883feeafda457f6b33f2e876ff 502 Gene3D G3DSA:3.30.420.40 252 483 4.0E-25 T 22-04-2016 APECO1_RS19960 e02d61883feeafda457f6b33f2e876ff 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 446 1.6E-19 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APECO1_RS19960 e02d61883feeafda457f6b33f2e876ff 502 PANTHER PTHR10196:SF9 1 445 1.5E-93 T 22-04-2016 APECO1_RS19960 e02d61883feeafda457f6b33f2e876ff 502 Gene3D G3DSA:3.30.420.40 6 244 4.2E-44 T 22-04-2016 APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 Pfam PF04851 Type III restriction enzyme, res subunit 443 622 1.0E-36 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 Pfam PF00271 Helicase conserved C-terminal domain 721 829 8.9E-10 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 239 396 1.4E-22 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 Gene3D G3DSA:3.40.50.300 710 831 2.1E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 Gene3D G3DSA:3.40.50.300 441 631 1.4E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 Pfam PF08463 EcoEI R protein C-terminal 1005 1165 1.8E-26 T 22-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 SMART SM00490 738 831 2.1E-8 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 PANTHER PTHR30195 128 582 0.0 T 22-04-2016 APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 PANTHER PTHR30195 600 1114 0.0 T 22-04-2016 APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 SMART SM00487 441 657 1.8E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 SUPERFAMILY SSF52540 690 832 8.63E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 SUPERFAMILY SSF52540 458 624 8.63E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 PANTHER PTHR30195:SF3 128 582 0.0 T 22-04-2016 APECO1_RS25065 066d52de9b2431080499e249f7df8fb8 1170 PANTHER PTHR30195:SF3 600 1114 0.0 T 22-04-2016 APECO1_RS10150 54c57e4a1cf3d886a589566b0210d7c1 329 PIRSF PIRSF002816 1 326 4.8E-151 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 APECO1_RS10150 54c57e4a1cf3d886a589566b0210d7c1 329 SUPERFAMILY SSF53822 26 325 1.47E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS10150 54c57e4a1cf3d886a589566b0210d7c1 329 Gene3D G3DSA:3.40.50.2300 148 297 7.9E-56 T 22-04-2016 APECO1_RS10150 54c57e4a1cf3d886a589566b0210d7c1 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 3.6E-96 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APECO1_RS10150 54c57e4a1cf3d886a589566b0210d7c1 329 Gene3D G3DSA:3.40.50.2300 25 147 1.4E-44 T 22-04-2016 APECO1_RS10150 54c57e4a1cf3d886a589566b0210d7c1 329 PANTHER PTHR30036:SF1 1 329 1.3E-139 T 22-04-2016 APECO1_RS10150 54c57e4a1cf3d886a589566b0210d7c1 329 PANTHER PTHR30036 1 329 1.3E-139 T 22-04-2016 APECO1_RS03285 1847509f375bb1ed4fc98d431e13d5bf 411 Pfam PF07005 Putative sugar-binding N-terminal domain 10 220 2.9E-51 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain APECO1_RS03285 1847509f375bb1ed4fc98d431e13d5bf 411 SUPERFAMILY SSF142764 10 405 1.7E-90 T 22-04-2016 APECO1_RS03285 1847509f375bb1ed4fc98d431e13d5bf 411 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 234 398 7.0E-32 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain APECO1_RS25210 8c23dcd724defdfc273aaee51bbabc62 148 Pfam PF00583 Acetyltransferase (GNAT) family 47 120 7.0E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS25210 8c23dcd724defdfc273aaee51bbabc62 148 SUPERFAMILY SSF55729 3 146 3.49E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS25210 8c23dcd724defdfc273aaee51bbabc62 148 Gene3D G3DSA:3.40.630.30 3 147 1.6E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS25210 8c23dcd724defdfc273aaee51bbabc62 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 4.3E-48 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 APECO1_RS25210 8c23dcd724defdfc273aaee51bbabc62 148 PANTHER PTHR23091:SF247 3 148 7.9E-40 T 22-04-2016 APECO1_RS25210 8c23dcd724defdfc273aaee51bbabc62 148 PANTHER PTHR23091 3 148 7.9E-40 T 22-04-2016 APECO1_RS13670 b4dc648fe095d6785644a20f76a88d53 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 1 191 2.0E-110 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 APECO1_RS13670 b4dc648fe095d6785644a20f76a88d53 191 Gene3D G3DSA:2.60.460.10 26 191 3.2E-84 T 22-04-2016 APECO1_RS13670 b4dc648fe095d6785644a20f76a88d53 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 191 4.9E-82 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 APECO1_RS13735 042f4eb5c2aad3d036662a8f858037b7 278 Pfam PF14450 Cell division protein FtsA 141 209 1.3E-8 T 22-04-2016 APECO1_RS13735 042f4eb5c2aad3d036662a8f858037b7 278 Gene3D G3DSA:3.30.420.40 13 147 2.2E-22 T 22-04-2016 APECO1_RS13735 042f4eb5c2aad3d036662a8f858037b7 278 Gene3D G3DSA:3.30.420.40 148 245 4.1E-34 T 22-04-2016 APECO1_RS13735 042f4eb5c2aad3d036662a8f858037b7 278 PANTHER PTHR32432 30 276 4.1E-61 T 22-04-2016 APECO1_RS13735 042f4eb5c2aad3d036662a8f858037b7 278 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 33 267 2.8E-111 T 22-04-2016 IPR013366 Ethanolamine utilisation EutJ UniPathway: UPA00560 APECO1_RS13735 042f4eb5c2aad3d036662a8f858037b7 278 SUPERFAMILY SSF53067 30 131 3.11E-9 T 22-04-2016 APECO1_RS13735 042f4eb5c2aad3d036662a8f858037b7 278 SUPERFAMILY SSF53067 141 260 4.54E-20 T 22-04-2016 APECO1_RS21645 d9dff7201c7803c66b1a3aa667a18321 397 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 34 363 4.6E-136 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX APECO1_RS21645 d9dff7201c7803c66b1a3aa667a18321 397 PANTHER PTHR38043 1 376 3.8E-123 T 22-04-2016 APECO1_RS22555 32228ddaaf08de94c62e1ce7bd3de2ae 113 Gene3D G3DSA:3.40.50.2300 3 99 1.3E-31 T 22-04-2016 APECO1_RS22555 32228ddaaf08de94c62e1ce7bd3de2ae 113 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 2.0E-13 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS22555 32228ddaaf08de94c62e1ce7bd3de2ae 113 PANTHER PTHR30505 1 113 9.4E-90 T 22-04-2016 APECO1_RS22555 32228ddaaf08de94c62e1ce7bd3de2ae 113 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 85 1.3E-25 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APECO1_RS22555 32228ddaaf08de94c62e1ce7bd3de2ae 113 SUPERFAMILY SSF52794 4 98 2.62E-27 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS22555 32228ddaaf08de94c62e1ce7bd3de2ae 113 PANTHER PTHR30505:SF7 1 113 9.4E-90 T 22-04-2016 APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 Gene3D G3DSA:1.10.8.60 316 413 2.1E-38 T 22-04-2016 APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 22-04-2016 APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 SUPERFAMILY SSF52540 64 403 1.78E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 9.3E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 PANTHER PTHR11262 10 413 1.7E-257 T 22-04-2016 APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 3.7E-217 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.718 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 SMART SM00994 12 51 1.0E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 SMART SM01086 317 412 4.8E-36 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 1.7E-17 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 SMART SM00382 111 333 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 3.0E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 Gene3D G3DSA:3.40.50.300 294 311 6.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02230 a012cfd0e4de441348271c672b888a8a 424 Gene3D G3DSA:3.40.50.300 66 253 6.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS08515 ad253733cd07a2916b4e771f3c67c864 248 Pfam PF06788 Uncharacterised protein family (UPF0257) 13 248 1.0E-127 T 22-04-2016 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 APECO1_RS08515 ad253733cd07a2916b4e771f3c67c864 248 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 13 248 68.353 T 22-04-2016 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 APECO1_RS08515 ad253733cd07a2916b4e771f3c67c864 248 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 13 248 9.0E-137 T 22-04-2016 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 APECO1_RS11075 6b5dab8665664d9033bada6077f9f47a 173 SUPERFAMILY SSF48295 63 121 1.62E-10 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APECO1_RS11075 6b5dab8665664d9033bada6077f9f47a 173 Gene3D G3DSA:1.10.10.60 65 166 1.8E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS11075 6b5dab8665664d9033bada6077f9f47a 173 Gene3D G3DSA:1.10.10.60 9 54 1.5E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS11075 6b5dab8665664d9033bada6077f9f47a 173 PANTHER PTHR33795:SF1 4 173 2.7E-50 T 22-04-2016 APECO1_RS11075 6b5dab8665664d9033bada6077f9f47a 173 Pfam PF13518 Helix-turn-helix domain 68 114 8.4E-10 T 22-04-2016 APECO1_RS11075 6b5dab8665664d9033bada6077f9f47a 173 Pfam PF13518 Helix-turn-helix domain 10 60 4.9E-9 T 22-04-2016 APECO1_RS11075 6b5dab8665664d9033bada6077f9f47a 173 PANTHER PTHR33795 4 173 2.7E-50 T 22-04-2016 APECO1_RS11075 6b5dab8665664d9033bada6077f9f47a 173 SUPERFAMILY SSF48295 2 60 1.88E-11 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APECO1_RS07855 9a3cb44e8f4f61f1ddfc4dce250ab9f1 298 Pfam PF01148 Cytidylyltransferase family 38 295 7.4E-63 T 22-04-2016 APECO1_RS07855 9a3cb44e8f4f61f1ddfc4dce250ab9f1 298 PANTHER PTHR13773 1 295 1.3E-122 T 22-04-2016 APECO1_RS07855 9a3cb44e8f4f61f1ddfc4dce250ab9f1 298 PANTHER PTHR13773:SF11 1 295 1.3E-122 T 22-04-2016 APECO1_RS22505 ee33b1f96fbb9fc32c120416e947a427 301 SUPERFAMILY SSF103481 44 144 3.53E-14 T 22-04-2016 APECO1_RS22505 ee33b1f96fbb9fc32c120416e947a427 301 PANTHER PTHR22911 7 295 8.5E-124 T 22-04-2016 APECO1_RS22505 ee33b1f96fbb9fc32c120416e947a427 301 Pfam PF00892 EamA-like transporter family 152 289 6.6E-26 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS22505 ee33b1f96fbb9fc32c120416e947a427 301 Pfam PF00892 EamA-like transporter family 13 141 1.1E-22 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS22505 ee33b1f96fbb9fc32c120416e947a427 301 SUPERFAMILY SSF103481 189 292 1.7E-16 T 22-04-2016 APECO1_RS22505 ee33b1f96fbb9fc32c120416e947a427 301 PANTHER PTHR22911:SF63 7 295 8.5E-124 T 22-04-2016 APECO1_RS18420 8f27ec0d780bfc7bb9f01b24673b9a1a 260 Pfam PF02405 Permease MlaE 44 256 5.5E-73 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APECO1_RS18420 8f27ec0d780bfc7bb9f01b24673b9a1a 260 PANTHER PTHR30188 1 260 4.5E-125 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APECO1_RS18420 8f27ec0d780bfc7bb9f01b24673b9a1a 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 5.4E-107 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria APECO1_RS18420 8f27ec0d780bfc7bb9f01b24673b9a1a 260 PANTHER PTHR30188:SF4 1 260 4.5E-125 T 22-04-2016 APECO1_RS02040 a4b4aba2ceaa5b92465e9b050af98628 439 PANTHER PTHR30588 2 439 3.6E-237 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APECO1_RS02040 a4b4aba2ceaa5b92465e9b050af98628 439 Pfam PF05525 Branched-chain amino acid transport protein 8 429 7.0E-161 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APECO1_RS02040 a4b4aba2ceaa5b92465e9b050af98628 439 PANTHER PTHR30588:SF0 2 439 3.6E-237 T 22-04-2016 APECO1_RS02040 a4b4aba2ceaa5b92465e9b050af98628 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.2E-165 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APECO1_RS18390 1135329776a2425b4c787ff33a825106 92 Gene3D G3DSA:1.10.260.40 6 72 2.2E-37 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS18390 1135329776a2425b4c787ff33a825106 92 SUPERFAMILY SSF47413 3 72 1.24E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS18390 1135329776a2425b4c787ff33a825106 92 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 4.9E-35 T 22-04-2016 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 PIRSF PIRSF001492 1 514 3.5E-206 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 1.4E-246 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 SUPERFAMILY SSF64158 79 310 1.09E-85 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 49.882 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 Pfam PF01676 Metalloenzyme superfamily 6 500 1.9E-84 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 PANTHER PTHR31637:SF0 1 514 5.3E-296 T 22-04-2016 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 299 2.7E-83 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 SUPERFAMILY SSF53649 311 510 1.83E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 SUPERFAMILY SSF53649 5 79 1.83E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 Gene3D G3DSA:3.40.1450.10 80 310 8.8E-99 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 PANTHER PTHR31637 1 514 5.3E-296 T 22-04-2016 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 Gene3D G3DSA:3.40.720.10 315 510 8.1E-89 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS20670 4173f52e6b4faf6a1f19092230de78b4 514 Gene3D G3DSA:3.40.720.10 5 79 8.1E-89 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS11165 7126d61c36036d5fcc00115c81e910a0 60 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 54 7.7E-12 T 22-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 APECO1_RS11165 7126d61c36036d5fcc00115c81e910a0 60 PANTHER PTHR40453:SF1 1 60 2.7E-18 T 22-04-2016 APECO1_RS11165 7126d61c36036d5fcc00115c81e910a0 60 PANTHER PTHR40453 1 60 2.7E-18 T 22-04-2016 APECO1_RS11165 7126d61c36036d5fcc00115c81e910a0 60 SUPERFAMILY SSF52540 2 54 1.15E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11165 7126d61c36036d5fcc00115c81e910a0 60 Gene3D G3DSA:3.40.50.300 2 53 1.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 4.8E-28 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 SMART SM00893 7 180 2.4E-14 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 PIRSF PIRSF000089 3 312 2.2E-85 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 Pfam PF01012 Electron transfer flavoprotein domain 22 167 8.9E-19 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 PANTHER PTHR10909 172 307 1.9E-98 T 22-04-2016 APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 PANTHER PTHR10909 58 153 1.9E-98 T 22-04-2016 APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 SUPERFAMILY SSF52402 6 181 1.19E-27 T 22-04-2016 APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 Gene3D G3DSA:3.40.50.620 3 167 8.6E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 SUPERFAMILY SSF52467 189 309 6.95E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 PANTHER PTHR10909:SF306 172 307 1.9E-98 T 22-04-2016 APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 PANTHER PTHR10909:SF306 58 153 1.9E-98 T 22-04-2016 APECO1_RS09115 271921663c460b408fba9ec3c9c7b943 312 Gene3D G3DSA:3.40.50.1220 184 311 1.0E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 Gene3D G3DSA:1.20.5.1040 101 185 2.1E-33 T 22-04-2016 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 Gene3D G3DSA:1.20.5.1040 2 84 7.0E-27 T 22-04-2016 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 442 8.1E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 Pfam PF08521 Two-component sensor kinase N-terminal 23 158 3.6E-8 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 PANTHER PTHR24423:SF474 6 142 3.1E-158 T 22-04-2016 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 PANTHER PTHR24423:SF474 174 449 3.1E-158 T 22-04-2016 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 Gene3D G3DSA:1.10.287.130 231 298 3.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 PANTHER PTHR24423 6 142 3.1E-158 T 22-04-2016 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 PANTHER PTHR24423 174 449 3.1E-158 T 22-04-2016 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 SUPERFAMILY SSF47384 219 301 1.96E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 SUPERFAMILY SSF55874 291 447 2.49E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 3.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 SMART SM00388 236 302 8.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 SMART SM00387 348 449 7.3E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS17580 ae66bb4f0dd7cab2f8e73fc38cc25c46 449 Gene3D G3DSA:3.30.565.10 310 448 1.2E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS20675 491ee9c08d1322f34f03dd1594892495 427 Gene3D G3DSA:2.70.70.10 288 426 5.1E-36 T 22-04-2016 APECO1_RS20675 491ee9c08d1322f34f03dd1594892495 427 Pfam PF01551 Peptidase family M23 328 421 5.6E-26 T 22-04-2016 IPR016047 Peptidase M23 APECO1_RS20675 491ee9c08d1322f34f03dd1594892495 427 PANTHER PTHR21666 19 427 6.6E-204 T 22-04-2016 APECO1_RS20675 491ee9c08d1322f34f03dd1594892495 427 PANTHER PTHR21666:SF213 19 427 6.6E-204 T 22-04-2016 APECO1_RS20675 491ee9c08d1322f34f03dd1594892495 427 SUPERFAMILY SSF51261 226 425 3.45E-47 T 22-04-2016 IPR011055 Duplicated hybrid motif APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 Pfam PF00107 Zinc-binding dehydrogenase 168 238 4.4E-18 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 SUPERFAMILY SSF51735 136 238 2.76E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 Gene3D G3DSA:3.40.50.720 163 239 1.4E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 PANTHER PTHR11695:SF559 71 240 6.4E-56 T 22-04-2016 APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 PANTHER PTHR11695:SF559 12 48 6.4E-56 T 22-04-2016 APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 SUPERFAMILY SSF50129 1 167 9.92E-12 T 22-04-2016 IPR011032 GroES-like APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 PANTHER PTHR11695 71 240 6.4E-56 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 PANTHER PTHR11695 12 48 6.4E-56 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 Gene3D G3DSA:3.90.180.10 1 93 2.0E-4 T 22-04-2016 IPR011032 GroES-like APECO1_RS07270 47b3089aad192fa562121561f17e5215 240 Gene3D G3DSA:3.90.180.10 94 162 5.4E-12 T 22-04-2016 IPR011032 GroES-like APECO1_RS18395 da252a2c9269b079bc15906d45923c9b 419 Gene3D G3DSA:3.65.10.10 21 219 8.1E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APECO1_RS18395 da252a2c9269b079bc15906d45923c9b 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.1E-184 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS18395 da252a2c9269b079bc15906d45923c9b 419 PANTHER PTHR21090 1 419 1.1E-226 T 22-04-2016 APECO1_RS18395 da252a2c9269b079bc15906d45923c9b 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 46.803 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APECO1_RS18395 da252a2c9269b079bc15906d45923c9b 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 5.4E-131 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APECO1_RS18395 da252a2c9269b079bc15906d45923c9b 419 Gene3D G3DSA:3.65.10.10 220 416 3.8E-64 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APECO1_RS18395 da252a2c9269b079bc15906d45923c9b 419 SUPERFAMILY SSF55205 1 418 4.25E-147 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APECO1_RS15865 0898791abbc91e671cb48c247eb149ae 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 8.0E-223 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APECO1_RS15865 0898791abbc91e671cb48c247eb149ae 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.5E-96 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APECO1_RS15865 0898791abbc91e671cb48c247eb149ae 455 PANTHER PTHR30182:SF5 1 452 0.0 T 22-04-2016 APECO1_RS15865 0898791abbc91e671cb48c247eb149ae 455 Pfam PF03315 Serine dehydratase beta chain 3 155 3.3E-56 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APECO1_RS15865 0898791abbc91e671cb48c247eb149ae 455 PANTHER PTHR30182 1 452 0.0 T 22-04-2016 APECO1_RS15865 0898791abbc91e671cb48c247eb149ae 455 SUPERFAMILY SSF143548 16 158 6.54E-46 T 22-04-2016 IPR029009 Allosteric substrate binding domain APECO1_RS15865 0898791abbc91e671cb48c247eb149ae 455 Gene3D G3DSA:3.30.1330.90 10 158 3.5E-55 T 22-04-2016 IPR029009 Allosteric substrate binding domain APECO1_RS16375 fa857e189c3f4836b58afabb17b10182 455 PANTHER PTHR11119 1 450 1.1E-299 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS16375 fa857e189c3f4836b58afabb17b10182 455 Pfam PF00860 Permease family 32 415 2.2E-79 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS16375 fa857e189c3f4836b58afabb17b10182 455 PANTHER PTHR11119:SF43 1 450 1.1E-299 T 22-04-2016 APECO1_RS10115 b655b9e362d93c5fd3fada70d38c158f 192 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 7.2E-82 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 APECO1_RS10115 b655b9e362d93c5fd3fada70d38c158f 192 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 192 8.0E-111 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 APECO1_RS10115 b655b9e362d93c5fd3fada70d38c158f 192 PIRSF PIRSF003159 1 181 8.1E-92 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 APECO1_RS10115 b655b9e362d93c5fd3fada70d38c158f 192 SUPERFAMILY SSF160930 5 160 1.7E-64 T 22-04-2016 APECO1_RS10115 b655b9e362d93c5fd3fada70d38c158f 192 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 186 45.439 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 APECO1_RS00925 2a8417f05aa2add8d8a5078865f1ec6c 285 Pfam PF01148 Cytidylyltransferase family 4 278 5.3E-71 T 22-04-2016 APECO1_RS00925 2a8417f05aa2add8d8a5078865f1ec6c 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 APECO1_RS00925 2a8417f05aa2add8d8a5078865f1ec6c 285 PANTHER PTHR13773 2 279 9.5E-98 T 22-04-2016 APECO1_RS06810 b60634a96763deac332d924acf31df2f 136 SUPERFAMILY SSF160419 3 128 3.4E-45 T 22-04-2016 IPR009833 Uncharacterised protein DUF1398 APECO1_RS06810 b60634a96763deac332d924acf31df2f 136 Gene3D G3DSA:3.30.1810.10 1 128 3.6E-53 T 22-04-2016 IPR009833 Uncharacterised protein DUF1398 APECO1_RS06810 b60634a96763deac332d924acf31df2f 136 ProDom PD021249 YDFO YCGX ENVELOPE CYTOPLASMIC STY1988 CP-933X ECS1626 YBCV PROPHAGE 6 127 2.0E-66 T 22-04-2016 IPR009833 Uncharacterised protein DUF1398 APECO1_RS06810 b60634a96763deac332d924acf31df2f 136 Pfam PF07166 Protein of unknown function (DUF1398) 8 126 1.7E-41 T 22-04-2016 IPR009833 Uncharacterised protein DUF1398 APECO1_RS05585 34e13da1fc6fa973ac82a35dfc27c651 341 PANTHER PTHR30480 4 326 2.4E-146 T 22-04-2016 APECO1_RS05585 34e13da1fc6fa973ac82a35dfc27c651 341 SUPERFAMILY SSF51445 3 316 8.53E-86 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS05585 34e13da1fc6fa973ac82a35dfc27c651 341 Gene3D G3DSA:3.20.20.300 3 328 1.9E-96 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APECO1_RS05585 34e13da1fc6fa973ac82a35dfc27c651 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.68 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 APECO1_RS05585 34e13da1fc6fa973ac82a35dfc27c651 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 APECO1_RS05585 34e13da1fc6fa973ac82a35dfc27c651 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 318 1.2E-100 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APECO1_RS05585 34e13da1fc6fa973ac82a35dfc27c651 341 PANTHER PTHR30480:SF7 4 326 2.4E-146 T 22-04-2016 APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 PANTHER PTHR30081 7 318 8.6E-92 T 22-04-2016 APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 1.9E-87 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 SUPERFAMILY SSF82866 79 303 6.41E-39 T 22-04-2016 APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 Pfam PF02355 Protein export membrane protein 117 301 1.8E-69 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 28.189 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 Pfam PF07549 SecD/SecF GG Motif 39 66 1.5E-11 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 125 289 2.5E-54 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APECO1_RS02080 6f0f70b2ec5ace4d18481c7117b55854 323 Gene3D G3DSA:1.20.1640.10 140 305 4.6E-24 T 22-04-2016 APECO1_RS04475 f3b51593cfb74b4eae1a48042f8bc2db 590 Pfam PF03237 Terminase-like family 164 571 2.6E-107 T 22-04-2016 IPR004921 Terminase, large subunit APECO1_RS04475 f3b51593cfb74b4eae1a48042f8bc2db 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 13 69 6.6E-25 T 22-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 APECO1_RS04475 f3b51593cfb74b4eae1a48042f8bc2db 590 Gene3D G3DSA:1.10.10.10 10 47 2.8E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11630 f3b51593cfb74b4eae1a48042f8bc2db 590 Pfam PF03237 Terminase-like family 164 571 2.6E-107 T 22-04-2016 IPR004921 Terminase, large subunit APECO1_RS11630 f3b51593cfb74b4eae1a48042f8bc2db 590 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 13 69 6.6E-25 T 22-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 APECO1_RS11630 f3b51593cfb74b4eae1a48042f8bc2db 590 Gene3D G3DSA:1.10.10.10 10 47 2.8E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01055 27e6665aa82f2e15b85e41e94f34145b 190 SUPERFAMILY SSF56784 3 185 4.96E-53 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS01055 27e6665aa82f2e15b85e41e94f34145b 190 PANTHER PTHR23133:SF3 6 185 1.2E-73 T 22-04-2016 APECO1_RS01055 27e6665aa82f2e15b85e41e94f34145b 190 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 155 8.0E-38 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 APECO1_RS01055 27e6665aa82f2e15b85e41e94f34145b 190 PIRSF PIRSF004682 1 189 7.9E-67 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 APECO1_RS01055 27e6665aa82f2e15b85e41e94f34145b 190 PANTHER PTHR23133 6 185 1.2E-73 T 22-04-2016 APECO1_RS01055 27e6665aa82f2e15b85e41e94f34145b 190 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 154 8.7E-39 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APECO1_RS01055 27e6665aa82f2e15b85e41e94f34145b 190 Gene3D G3DSA:3.40.50.1000 3 183 1.1E-62 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS01055 27e6665aa82f2e15b85e41e94f34145b 190 Pfam PF13242 HAD-hyrolase-like 109 179 5.6E-12 T 22-04-2016 APECO1_RS01055 27e6665aa82f2e15b85e41e94f34145b 190 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 3.0E-100 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 SUPERFAMILY SSF52518 3 186 4.21E-46 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 Gene3D G3DSA:3.40.50.1220 186 358 3.8E-46 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 Gene3D G3DSA:3.40.50.970 362 572 3.4E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 Gene3D G3DSA:3.40.50.970 3 180 5.2E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 577 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 SUPERFAMILY SSF52467 157 363 2.89E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 326 2.9E-33 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 PANTHER PTHR18968 1 579 0.0 T 22-04-2016 APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 1.8E-50 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 SUPERFAMILY SSF52518 368 569 4.65E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 PANTHER PTHR18968:SF14 1 579 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 APECO1_RS24960 5da3fc5752ec52a133be6fb2b154d921 579 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 1.2E-30 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 SMART SM01400 4 121 5.7E-76 T 22-04-2016 APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 Gene3D G3DSA:3.40.50.2020 160 285 2.5E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 SUPERFAMILY SSF53271 69 306 5.83E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 2.0E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.757 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.1E-30 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.7E-127 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 PANTHER PTHR10210:SF41 2 315 4.0E-189 T 22-04-2016 APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 PANTHER PTHR10210 2 315 4.0E-189 T 22-04-2016 APECO1_RS06395 55b665c7de7d2354089745562edafe6c 315 Gene3D G3DSA:3.40.50.2020 2 159 3.7E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS19755 f7b3e85a797345c3018d5ecbf68c6747 438 PANTHER PTHR30061 1 438 1.1E-181 T 22-04-2016 APECO1_RS19755 f7b3e85a797345c3018d5ecbf68c6747 438 PANTHER PTHR30061:SF7 1 438 1.1E-181 T 22-04-2016 APECO1_RS19755 f7b3e85a797345c3018d5ecbf68c6747 438 SUPERFAMILY SSF53850 25 425 3.26E-77 T 22-04-2016 APECO1_RS19755 f7b3e85a797345c3018d5ecbf68c6747 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 APECO1_RS19755 f7b3e85a797345c3018d5ecbf68c6747 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 5.9E-45 T 22-04-2016 APECO1_RS19755 f7b3e85a797345c3018d5ecbf68c6747 438 Gene3D G3DSA:3.40.190.10 145 345 1.9E-42 T 22-04-2016 APECO1_RS05030 dddeae53264e5117b910705a80611609 342 SUPERFAMILY SSF53822 45 302 1.7E-38 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS05030 dddeae53264e5117b910705a80611609 342 PANTHER PTHR30146:SF60 1 341 6.1E-212 T 22-04-2016 APECO1_RS05030 dddeae53264e5117b910705a80611609 342 Gene3D G3DSA:3.40.50.2300 45 161 3.7E-14 T 22-04-2016 APECO1_RS05030 dddeae53264e5117b910705a80611609 342 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 46 334 1.0E-131 T 22-04-2016 IPR014301 TMAO reductase system periplasmic, TorT APECO1_RS05030 dddeae53264e5117b910705a80611609 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 44 337 1.7E-94 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APECO1_RS05030 dddeae53264e5117b910705a80611609 342 Gene3D G3DSA:3.40.50.2300 162 306 4.5E-28 T 22-04-2016 APECO1_RS05030 dddeae53264e5117b910705a80611609 342 PANTHER PTHR30146 1 341 6.1E-212 T 22-04-2016 APECO1_RS11860 0ce15c9c0a12948149d0d1e8b08014b6 362 SUPERFAMILY SSF52540 56 331 6.59E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11860 0ce15c9c0a12948149d0d1e8b08014b6 362 Gene3D G3DSA:3.40.50.300 65 236 3.1E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11860 0ce15c9c0a12948149d0d1e8b08014b6 362 SMART SM00382 75 230 2.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS11860 0ce15c9c0a12948149d0d1e8b08014b6 362 PANTHER PTHR22908 20 356 1.5E-83 T 22-04-2016 APECO1_RS11860 0ce15c9c0a12948149d0d1e8b08014b6 362 Pfam PF07728 AAA domain (dynein-related subfamily) 79 220 3.7E-33 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 APECO1_RS11860 0ce15c9c0a12948149d0d1e8b08014b6 362 PANTHER PTHR22908:SF54 20 356 1.5E-83 T 22-04-2016 APECO1_RS06265 15fc9e1cee0a398cb5b81b51b774b215 513 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 0.0 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 APECO1_RS06265 15fc9e1cee0a398cb5b81b51b774b215 513 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 513 367.441 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 APECO1_RS06265 15fc9e1cee0a398cb5b81b51b774b215 513 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 0.0 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 APECO1_RS06265 15fc9e1cee0a398cb5b81b51b774b215 513 PANTHER PTHR10283:SF93 12 167 0.0 T 22-04-2016 APECO1_RS06265 15fc9e1cee0a398cb5b81b51b774b215 513 PANTHER PTHR10283:SF93 195 510 0.0 T 22-04-2016 APECO1_RS06265 15fc9e1cee0a398cb5b81b51b774b215 513 PANTHER PTHR10283 12 167 0.0 T 22-04-2016 APECO1_RS06265 15fc9e1cee0a398cb5b81b51b774b215 513 PANTHER PTHR10283 195 510 0.0 T 22-04-2016 APECO1_RS25585 29a32e2bea59168288e0a1cd9a2c2cb3 322 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 97 315 3.5E-94 T 22-04-2016 APECO1_RS25585 29a32e2bea59168288e0a1cd9a2c2cb3 322 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 112 283 1.7E-26 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 APECO1_RS25585 29a32e2bea59168288e0a1cd9a2c2cb3 322 Gene3D G3DSA:1.10.150.210 126 175 5.7E-28 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 APECO1_RS25585 29a32e2bea59168288e0a1cd9a2c2cb3 322 SUPERFAMILY SSF56784 109 316 7.34E-48 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS25585 29a32e2bea59168288e0a1cd9a2c2cb3 322 Pfam PF12710 haloacid dehalogenase-like hydrolase 146 280 1.6E-18 T 22-04-2016 APECO1_RS25585 29a32e2bea59168288e0a1cd9a2c2cb3 322 Gene3D G3DSA:3.40.50.1000 176 302 5.2E-40 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS25585 29a32e2bea59168288e0a1cd9a2c2cb3 322 PANTHER PTHR10000:SF7 4 321 2.5E-218 T 22-04-2016 APECO1_RS25585 29a32e2bea59168288e0a1cd9a2c2cb3 322 PANTHER PTHR10000 4 321 2.5E-218 T 22-04-2016 APECO1_RS23870 48f5bb20b645b03fe0b396c80e4ca6e1 165 PANTHER PTHR34309:SF1 15 153 2.5E-19 T 22-04-2016 APECO1_RS23870 48f5bb20b645b03fe0b396c80e4ca6e1 165 SUPERFAMILY SSF143744 25 154 9.94E-32 T 22-04-2016 APECO1_RS23870 48f5bb20b645b03fe0b396c80e4ca6e1 165 Pfam PF03928 Haem-degrading 27 151 6.8E-25 T 22-04-2016 IPR005624 Haem-degrading APECO1_RS23870 48f5bb20b645b03fe0b396c80e4ca6e1 165 PANTHER PTHR34309 15 153 2.5E-19 T 22-04-2016 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 8.7E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 8.7E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 8.7E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 8.7E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 8.7E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 8.7E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 PIRSF PIRSF000114 1 336 1.8E-101 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 1.4E-52 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 Gene3D G3DSA:1.10.1040.10 184 330 2.3E-58 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 5.9E-52 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.955 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 PANTHER PTHR11728 1 339 4.2E-150 T 22-04-2016 APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 Gene3D G3DSA:3.40.50.720 9 182 6.7E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 SUPERFAMILY SSF51735 8 182 4.4E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20650 1a8711b9d137a136af7ca5a23ee78b64 339 SUPERFAMILY SSF48179 184 335 8.16E-58 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 SMART SM00382 209 389 3.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 PANTHER PTHR32039:SF7 1 504 2.2E-268 T 22-04-2016 IPR004482 Mg chelatase-related protein APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 Gene3D G3DSA:3.40.50.300 189 384 5.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 Gene3D G3DSA:3.30.230.10 5 166 1.5E-25 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 SUPERFAMILY SSF54211 11 169 8.72E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 PANTHER PTHR32039 1 504 2.2E-268 T 22-04-2016 APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 386 1.8E-89 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 SUPERFAMILY SSF52540 188 503 1.25E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 492 1.8E-29 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.1E-44 T 22-04-2016 APECO1_RS21460 f1803c257123452ebf3b8dea1c1b2d3c 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 2.7E-249 T 22-04-2016 IPR004482 Mg chelatase-related protein APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 Pfam PF13237 4Fe-4S dicluster domain 221 270 6.1E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 24 278 4.7E-117 T 22-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 PANTHER PTHR30176 2 287 6.9E-97 T 22-04-2016 APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 SUPERFAMILY SSF54862 103 143 6.98E-21 T 22-04-2016 APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 SUPERFAMILY SSF54862 191 280 6.98E-21 T 22-04-2016 APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 Gene3D G3DSA:3.30.70.20 191 279 1.2E-16 T 22-04-2016 APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 PANTHER PTHR30176:SF2 2 287 6.9E-97 T 22-04-2016 APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 226 237 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 Pfam PF12801 4Fe-4S binding domain 83 126 1.4E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS12305 c0e1253dde259199d4f90ddcf37db47d 287 Pfam PF12801 4Fe-4S binding domain 178 211 7.2E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS17805 6eef03657d134c52e9725ddeea8523f6 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 4.7E-50 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APECO1_RS17805 6eef03657d134c52e9725ddeea8523f6 205 PANTHER PTHR30309 1 205 9.2E-103 T 22-04-2016 APECO1_RS17805 6eef03657d134c52e9725ddeea8523f6 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 8.0E-83 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APECO1_RS17805 6eef03657d134c52e9725ddeea8523f6 205 SMART SM01207 10 185 1.9E-86 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APECO1_RS17805 6eef03657d134c52e9725ddeea8523f6 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.447 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APECO1_RS17805 6eef03657d134c52e9725ddeea8523f6 205 PANTHER PTHR30309:SF0 1 205 9.2E-103 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APECO1_RS22045 45589e0d6140d039b9ea5e4c18478b35 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-44 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 APECO1_RS22045 45589e0d6140d039b9ea5e4c18478b35 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.1E-46 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 APECO1_RS04855 b0a4eedc5eb0b39ffbdcbd61c5630097 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 462 481 1.6E-9 T 22-04-2016 APECO1_RS04855 b0a4eedc5eb0b39ffbdcbd61c5630097 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 432 451 1.6E-9 T 22-04-2016 APECO1_RS04855 b0a4eedc5eb0b39ffbdcbd61c5630097 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 1.6E-9 T 22-04-2016 APECO1_RS04855 b0a4eedc5eb0b39ffbdcbd61c5630097 586 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 435 539 3.7E-10 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APECO1_RS04855 b0a4eedc5eb0b39ffbdcbd61c5630097 586 SUPERFAMILY SSF54211 349 540 2.77E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS04855 b0a4eedc5eb0b39ffbdcbd61c5630097 586 Pfam PF13654 AAA domain 140 298 9.8E-20 T 22-04-2016 APECO1_RS04855 b0a4eedc5eb0b39ffbdcbd61c5630097 586 PANTHER PTHR10046:SF49 3 546 8.5E-178 T 22-04-2016 APECO1_RS04855 b0a4eedc5eb0b39ffbdcbd61c5630097 586 PANTHER PTHR10046 3 546 8.5E-178 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APECO1_RS04855 b0a4eedc5eb0b39ffbdcbd61c5630097 586 Gene3D G3DSA:3.30.230.10 340 541 3.8E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS12720 3196ce19e8d8d88083060387212e6a7a 147 PANTHER PTHR11058:SF5 2 129 4.9E-75 T 22-04-2016 APECO1_RS12720 3196ce19e8d8d88083060387212e6a7a 147 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 5.0E-31 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 APECO1_RS12720 3196ce19e8d8d88083060387212e6a7a 147 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.913 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 APECO1_RS12720 3196ce19e8d8d88083060387212e6a7a 147 PANTHER PTHR11058 2 129 4.9E-75 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 SUPERFAMILY SSF51735 102 298 1.34E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 Gene3D G3DSA:3.40.50.720 1 137 2.0E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 PANTHER PTHR10996:SF161 1 328 3.2E-175 T 22-04-2016 APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 5.1E-35 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 PANTHER PTHR10996 1 328 3.2E-175 T 22-04-2016 APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 Gene3D G3DSA:3.40.50.720 138 305 7.5E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 5.4E-53 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APECO1_RS07815 9372114521ddb021cf3a3d46ba16a33d 329 SUPERFAMILY SSF52283 2 135 1.89E-45 T 22-04-2016 APECO1_RS09510 a733c77aaa66bd5b210acf07cab89c7a 459 Gene3D G3DSA:1.20.1250.20 25 218 1.0E-25 T 22-04-2016 APECO1_RS09510 a733c77aaa66bd5b210acf07cab89c7a 459 PANTHER PTHR24064 10 452 2.1E-180 T 22-04-2016 APECO1_RS09510 a733c77aaa66bd5b210acf07cab89c7a 459 Pfam PF00083 Sugar (and other) transporter 57 451 1.0E-32 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS09510 a733c77aaa66bd5b210acf07cab89c7a 459 Gene3D G3DSA:1.20.1250.20 264 443 5.3E-18 T 22-04-2016 APECO1_RS09510 a733c77aaa66bd5b210acf07cab89c7a 459 PANTHER PTHR24064:SF293 10 452 2.1E-180 T 22-04-2016 APECO1_RS09510 a733c77aaa66bd5b210acf07cab89c7a 459 SUPERFAMILY SSF103473 14 449 1.31E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS18625 da89535fcc37ea69c1a9f736e4b9291c 309 SUPERFAMILY SSF53850 90 292 3.26E-39 T 22-04-2016 APECO1_RS18625 da89535fcc37ea69c1a9f736e4b9291c 309 PANTHER PTHR30126 1 306 1.6E-173 T 22-04-2016 APECO1_RS18625 da89535fcc37ea69c1a9f736e4b9291c 309 Gene3D G3DSA:3.40.190.10 92 173 1.4E-8 T 22-04-2016 APECO1_RS18625 da89535fcc37ea69c1a9f736e4b9291c 309 Gene3D G3DSA:3.40.190.10 174 259 4.3E-17 T 22-04-2016 APECO1_RS18625 da89535fcc37ea69c1a9f736e4b9291c 309 PANTHER PTHR30126:SF26 1 306 1.6E-173 T 22-04-2016 APECO1_RS18625 da89535fcc37ea69c1a9f736e4b9291c 309 Pfam PF03466 LysR substrate binding domain 90 290 8.5E-39 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS18625 da89535fcc37ea69c1a9f736e4b9291c 309 SUPERFAMILY SSF46785 4 108 5.17E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18625 da89535fcc37ea69c1a9f736e4b9291c 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS18625 da89535fcc37ea69c1a9f736e4b9291c 309 Gene3D G3DSA:1.10.10.10 3 87 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS13415 8902fe615cdfe858076263ea63c7a812 412 Gene3D G3DSA:3.40.640.10 50 263 6.3E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS13415 8902fe615cdfe858076263ea63c7a812 412 PANTHER PTHR11751:SF302 18 398 3.2E-272 T 22-04-2016 APECO1_RS13415 8902fe615cdfe858076263ea63c7a812 412 Pfam PF00155 Aminotransferase class I and II 37 376 2.3E-60 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS13415 8902fe615cdfe858076263ea63c7a812 412 PANTHER PTHR11751 18 398 3.2E-272 T 22-04-2016 APECO1_RS13415 8902fe615cdfe858076263ea63c7a812 412 SUPERFAMILY SSF53383 10 394 3.54E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS13415 8902fe615cdfe858076263ea63c7a812 412 Gene3D G3DSA:3.90.1150.10 264 395 9.1E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 Pfam PF00664 ABC transporter transmembrane region 34 291 4.0E-7 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 Gene3D G3DSA:1.20.1560.10 17 331 1.9E-34 T 22-04-2016 APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 Pfam PF00005 ABC transporter 361 510 1.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 SUPERFAMILY SSF52540 339 581 1.91E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 SMART SM00382 370 562 6.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 SUPERFAMILY SSF90123 17 334 2.88E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 PANTHER PTHR24222:SF25 1 597 0.0 T 22-04-2016 APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 PANTHER PTHR24222 1 597 0.0 T 22-04-2016 APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 Gene3D G3DSA:3.40.50.300 344 575 1.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10835 d61c135597348dca9164f296e9c12d22 600 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS09500 4ef43cbedb3e10d7e1ec6a8ce7de7fa2 278 PANTHER PTHR30304 4 277 1.4E-80 T 22-04-2016 APECO1_RS09500 4ef43cbedb3e10d7e1ec6a8ce7de7fa2 278 SUPERFAMILY SSF51569 2 277 2.2E-82 T 22-04-2016 APECO1_RS09500 4ef43cbedb3e10d7e1ec6a8ce7de7fa2 278 Gene3D G3DSA:3.20.20.70 2 277 2.3E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS09500 4ef43cbedb3e10d7e1ec6a8ce7de7fa2 278 PIRSF PIRSF001359 1 277 2.4E-76 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS09500 4ef43cbedb3e10d7e1ec6a8ce7de7fa2 278 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 277 1.4E-97 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS09500 4ef43cbedb3e10d7e1ec6a8ce7de7fa2 278 Pfam PF01116 Fructose-bisphosphate aldolase class-II 10 276 2.3E-87 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS09725 4c553198e7900ab1cdf0390884503954 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 3.8E-76 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS09725 4c553198e7900ab1cdf0390884503954 266 PANTHER PTHR32502:SF4 1 266 1.4E-180 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS09725 4c553198e7900ab1cdf0390884503954 266 PANTHER PTHR32502 1 266 1.4E-180 T 22-04-2016 APECO1_RS09725 4c553198e7900ab1cdf0390884503954 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 1.9E-132 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS16355 63ac60cb4e29b3126890ccc25da4c5a4 259 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 167 248 1.1E-4 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APECO1_RS16355 63ac60cb4e29b3126890ccc25da4c5a4 259 SMART SM01092 161 251 2.0E-11 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APECO1_RS16355 63ac60cb4e29b3126890ccc25da4c5a4 259 Gene3D G3DSA:3.30.390.50 165 252 4.6E-12 T 22-04-2016 APECO1_RS16355 63ac60cb4e29b3126890ccc25da4c5a4 259 TIGRFAM TIGR03312 Se_sel_red_FAD: probable selenate reductase, FAD-binding subunit 2 258 1.1E-147 T 22-04-2016 IPR017698 Probable selenate reductase, FAD-binding subunit APECO1_RS16355 63ac60cb4e29b3126890ccc25da4c5a4 259 SUPERFAMILY SSF55447 164 252 4.32E-13 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APECO1_RS16355 63ac60cb4e29b3126890ccc25da4c5a4 259 SUPERFAMILY SSF56176 4 154 5.07E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS16355 63ac60cb4e29b3126890ccc25da4c5a4 259 Gene3D G3DSA:3.30.465.10 53 138 1.3E-12 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS16355 63ac60cb4e29b3126890ccc25da4c5a4 259 PANTHER PTHR11908 5 248 1.3E-22 T 22-04-2016 APECO1_RS16355 63ac60cb4e29b3126890ccc25da4c5a4 259 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 146 1.3E-19 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 APECO1_RS15170 060e9e7f91e81bc06bb533d26e03c622 220 SMART SM00895 76 208 9.4E-17 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS15170 060e9e7f91e81bc06bb533d26e03c622 220 Gene3D G3DSA:1.20.120.530 69 218 4.0E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS15170 060e9e7f91e81bc06bb533d26e03c622 220 Pfam PF07729 FCD domain 76 206 6.9E-19 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS15170 060e9e7f91e81bc06bb533d26e03c622 220 SMART SM00345 8 66 2.0E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS15170 060e9e7f91e81bc06bb533d26e03c622 220 PANTHER PTHR11751 9 92 1.1E-16 T 22-04-2016 APECO1_RS15170 060e9e7f91e81bc06bb533d26e03c622 220 SUPERFAMILY SSF48008 72 209 3.92E-17 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS15170 060e9e7f91e81bc06bb533d26e03c622 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 66 2.5E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS15170 060e9e7f91e81bc06bb533d26e03c622 220 SUPERFAMILY SSF46785 9 70 2.15E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15170 060e9e7f91e81bc06bb533d26e03c622 220 Gene3D G3DSA:1.10.10.10 9 67 9.0E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 1.8E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 Gene3D G3DSA:1.10.10.10 142 212 4.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 3.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 3.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 3.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 SMART SM00421 153 210 1.8E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 PANTHER PTHR26402:SF607 11 210 2.0E-25 T 22-04-2016 APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 PANTHER PTHR26402 11 210 2.0E-25 T 22-04-2016 APECO1_RS05235 afffccf5eb53997c8ae631a30c1bbb83 216 SUPERFAMILY SSF46894 148 212 2.75E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS12980 047cb0cd77bc2d8be3d38ade3a6f3a3f 187 Pfam PF00419 Fimbrial protein 34 187 4.5E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS12980 047cb0cd77bc2d8be3d38ade3a6f3a3f 187 PANTHER PTHR33420:SF7 1 187 5.1E-74 T 22-04-2016 APECO1_RS12980 047cb0cd77bc2d8be3d38ade3a6f3a3f 187 Gene3D G3DSA:2.60.40.1090 30 187 4.9E-31 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS12980 047cb0cd77bc2d8be3d38ade3a6f3a3f 187 PANTHER PTHR33420 1 187 5.1E-74 T 22-04-2016 APECO1_RS12980 047cb0cd77bc2d8be3d38ade3a6f3a3f 187 SUPERFAMILY SSF49401 32 187 1.84E-27 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS03135 7eb7c488facda018e722ec774be721f6 241 PIRSF PIRSF039085 1 241 1.4E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APECO1_RS03135 7eb7c488facda018e722ec774be721f6 241 PANTHER PTHR24220 3 240 7.5E-195 T 22-04-2016 APECO1_RS03135 7eb7c488facda018e722ec774be721f6 241 SUPERFAMILY SSF52540 1 235 1.39E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03135 7eb7c488facda018e722ec774be721f6 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS03135 7eb7c488facda018e722ec774be721f6 241 PANTHER PTHR24220:SF317 3 240 7.5E-195 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 APECO1_RS03135 7eb7c488facda018e722ec774be721f6 241 Pfam PF00005 ABC transporter 17 165 4.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS03135 7eb7c488facda018e722ec774be721f6 241 SMART SM00382 26 213 1.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS03135 7eb7c488facda018e722ec774be721f6 241 Gene3D G3DSA:3.40.50.300 1 236 1.7E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10000 ab2c8d0e15e121d76f991aea7301fa1a 188 PANTHER PTHR11080:SF37 1 188 4.4E-83 T 22-04-2016 APECO1_RS10000 ab2c8d0e15e121d76f991aea7301fa1a 188 PANTHER PTHR11080 1 188 4.4E-83 T 22-04-2016 APECO1_RS10000 ab2c8d0e15e121d76f991aea7301fa1a 188 SUPERFAMILY SSF52499 4 188 3.92E-51 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS10000 ab2c8d0e15e121d76f991aea7301fa1a 188 Pfam PF00857 Isochorismatase family 9 182 2.0E-38 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS10000 ab2c8d0e15e121d76f991aea7301fa1a 188 Gene3D G3DSA:3.40.50.850 3 185 4.3E-52 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS24115 b8fbd7e971e10d4cb10475b0eb1206c3 117 Pfam PF13698 Domain of unknown function (DUF4156) 23 115 3.7E-33 T 22-04-2016 IPR025294 Protein of unknown function DUF4156 APECO1_RS24115 b8fbd7e971e10d4cb10475b0eb1206c3 117 Gene3D G3DSA:3.50.50.60 16 89 8.4E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS02785 b10b042d2ea4f1fba9ed5e66554ba1f3 217 PANTHER PTHR23026:SF101 1 217 3.1E-110 T 22-04-2016 APECO1_RS02785 b10b042d2ea4f1fba9ed5e66554ba1f3 217 SUPERFAMILY SSF55469 1 216 2.75E-64 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APECO1_RS02785 b10b042d2ea4f1fba9ed5e66554ba1f3 217 Gene3D G3DSA:3.40.109.10 1 214 1.1E-60 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APECO1_RS02785 b10b042d2ea4f1fba9ed5e66554ba1f3 217 PANTHER PTHR23026 1 217 3.1E-110 T 22-04-2016 APECO1_RS02785 b10b042d2ea4f1fba9ed5e66554ba1f3 217 Pfam PF00881 Nitroreductase family 8 193 3.5E-35 T 22-04-2016 IPR029479 Nitroreductase APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 114 371 6.5E-30 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 Gene3D G3DSA:3.30.750.80 73 180 7.0E-35 T 22-04-2016 APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 SUPERFAMILY SSF88697 4 72 5.04E-17 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 Gene3D G3DSA:3.40.50.150 185 395 1.5E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 Gene3D G3DSA:2.30.130.10 4 71 1.7E-27 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 PANTHER PTHR11061:SF12 7 396 1.9E-127 T 22-04-2016 APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 SMART SM00359 3 88 6.3E-19 T 22-04-2016 IPR002478 PUA domain GO:0003723 APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 PANTHER PTHR11061 7 396 1.9E-127 T 22-04-2016 APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 70.578 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APECO1_RS04925 11c5b6028cd15c6a8aea0c27ab3ac281 396 SUPERFAMILY SSF53335 79 392 2.99E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS20180 f6a268241d582c6cc54c37430ff9f30f 299 PANTHER PTHR30537 1 299 4.6E-194 T 22-04-2016 APECO1_RS20180 f6a268241d582c6cc54c37430ff9f30f 299 PANTHER PTHR30537:SF11 1 299 4.6E-194 T 22-04-2016 APECO1_RS20180 f6a268241d582c6cc54c37430ff9f30f 299 Pfam PF03466 LysR substrate binding domain 89 292 5.6E-42 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS20180 f6a268241d582c6cc54c37430ff9f30f 299 Gene3D G3DSA:3.40.190.10 179 260 9.7E-4 T 22-04-2016 APECO1_RS20180 f6a268241d582c6cc54c37430ff9f30f 299 Gene3D G3DSA:1.10.10.10 4 83 9.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20180 f6a268241d582c6cc54c37430ff9f30f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.9E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS20180 f6a268241d582c6cc54c37430ff9f30f 299 SUPERFAMILY SSF53850 90 297 1.65E-44 T 22-04-2016 APECO1_RS20180 f6a268241d582c6cc54c37430ff9f30f 299 SUPERFAMILY SSF46785 4 84 4.54E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20180 f6a268241d582c6cc54c37430ff9f30f 299 Gene3D G3DSA:3.40.190.10 92 178 6.2E-27 T 22-04-2016 APECO1_RS07155 f1625a7f912e8790c6ff6152dfed29e4 188 SUPERFAMILY SSF46689 3 74 1.35E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS07155 f1625a7f912e8790c6ff6152dfed29e4 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APECO1_RS07155 f1625a7f912e8790c6ff6152dfed29e4 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.9E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS07155 f1625a7f912e8790c6ff6152dfed29e4 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.9E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS07155 f1625a7f912e8790c6ff6152dfed29e4 188 Pfam PF13977 Bacterial transcriptional repressor 97 185 3.2E-6 T 22-04-2016 APECO1_RS07155 f1625a7f912e8790c6ff6152dfed29e4 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 6.5E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS07155 f1625a7f912e8790c6ff6152dfed29e4 188 Gene3D G3DSA:1.10.357.10 8 186 1.0E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS07155 f1625a7f912e8790c6ff6152dfed29e4 188 PANTHER PTHR30055 1 186 6.1E-21 T 22-04-2016 APECO1_RS06125 fc3cf3a3583f895b18da846eb2b20d46 243 SUPERFAMILY SSF46955 3 89 5.95E-21 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS06125 fc3cf3a3583f895b18da846eb2b20d46 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS06125 fc3cf3a3583f895b18da846eb2b20d46 243 Gene3D G3DSA:1.10.1660.10 4 87 1.4E-22 T 22-04-2016 APECO1_RS06125 fc3cf3a3583f895b18da846eb2b20d46 243 Pfam PF13411 MerR HTH family regulatory protein 4 71 4.9E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS06125 fc3cf3a3583f895b18da846eb2b20d46 243 PANTHER PTHR30204:SF19 1 239 5.0E-61 T 22-04-2016 APECO1_RS06125 fc3cf3a3583f895b18da846eb2b20d46 243 PANTHER PTHR30204 1 239 5.0E-61 T 22-04-2016 APECO1_RS06125 fc3cf3a3583f895b18da846eb2b20d46 243 SMART SM00422 4 73 3.6E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS25150 61c27c1430528e71237fa44e3aa2e192 157 PANTHER PTHR34390 1 157 4.3E-52 T 22-04-2016 APECO1_RS25150 61c27c1430528e71237fa44e3aa2e192 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 3.5E-33 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE APECO1_RS25150 61c27c1430528e71237fa44e3aa2e192 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 46.186 T 22-04-2016 IPR020914 Uncharacterised protein family UPF0442 APECO1_RS13250 8e134e92c1aa5da8e3d6737031e76a69 61 Gene3D G3DSA:1.10.260.40 1 59 3.6E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS13250 8e134e92c1aa5da8e3d6737031e76a69 61 SUPERFAMILY SSF47413 1 57 4.87E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS13250 8e134e92c1aa5da8e3d6737031e76a69 61 Pfam PF14549 DNA-binding transcriptional regulator Cro 3 60 6.0E-28 T 22-04-2016 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 2.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 2.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 2.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 2.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 2.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 PANTHER PTHR10353 7 477 1.8E-236 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 Pfam PF00232 Glycosyl hydrolase family 1 5 474 6.4E-132 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 PANTHER PTHR10353:SF35 7 477 1.8E-236 T 22-04-2016 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 Gene3D G3DSA:3.20.20.80 5 475 2.5E-154 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APECO1_RS16465 ffc9e87e4d1c0e817c0b9ff30ab2cd61 477 SUPERFAMILY SSF51445 3 470 2.9E-167 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS16940 290b36e825956655c6ae91c3fc32970a 423 PANTHER PTHR30006:SF5 20 348 2.6E-171 T 22-04-2016 APECO1_RS16940 290b36e825956655c6ae91c3fc32970a 423 Gene3D G3DSA:3.40.190.10 26 135 6.0E-16 T 22-04-2016 APECO1_RS16940 290b36e825956655c6ae91c3fc32970a 423 Gene3D G3DSA:3.40.190.10 272 311 6.0E-16 T 22-04-2016 APECO1_RS16940 290b36e825956655c6ae91c3fc32970a 423 SUPERFAMILY SSF53850 33 337 6.09E-40 T 22-04-2016 APECO1_RS16940 290b36e825956655c6ae91c3fc32970a 423 Gene3D G3DSA:3.40.190.10 142 271 2.1E-19 T 22-04-2016 APECO1_RS16940 290b36e825956655c6ae91c3fc32970a 423 Pfam PF13343 Bacterial extracellular solute-binding protein 87 311 1.5E-28 T 22-04-2016 APECO1_RS16940 290b36e825956655c6ae91c3fc32970a 423 PANTHER PTHR30006 20 348 2.6E-171 T 22-04-2016 APECO1_RS16525 967304230fc9960c61881a330f3e6323 76 Gene3D G3DSA:3.40.190.10 2 38 3.4E-4 T 22-04-2016 APECO1_RS16525 967304230fc9960c61881a330f3e6323 76 Pfam PF03466 LysR substrate binding domain 15 72 8.4E-8 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS16525 967304230fc9960c61881a330f3e6323 76 SUPERFAMILY SSF53850 14 74 9.05E-10 T 22-04-2016 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 PANTHER PTHR11451:SF3 4 244 1.8E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 PANTHER PTHR11451:SF3 399 571 1.8E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 PIRSF PIRSF001535 1 572 9.3E-279 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 SUPERFAMILY SSF55826 218 390 1.01E-30 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 1.4E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 9.9E-283 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 Gene3D G3DSA:3.90.960.10 250 388 6.4E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 SUPERFAMILY SSF55681 407 478 5.18E-109 T 22-04-2016 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 SUPERFAMILY SSF55681 10 237 5.18E-109 T 22-04-2016 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.326 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 Gene3D G3DSA:3.40.50.800 472 570 7.6E-32 T 22-04-2016 IPR004154 Anticodon-binding APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 3.9E-49 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 Gene3D G3DSA:3.30.930.10 389 471 3.9E-108 T 22-04-2016 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 Gene3D G3DSA:3.30.930.10 10 234 3.9E-108 T 22-04-2016 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 SUPERFAMILY SSF52954 463 571 1.21E-33 T 22-04-2016 IPR004154 Anticodon-binding APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.6E-20 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.6E-20 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.6E-20 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.6E-20 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 Pfam PF03129 Anticodon binding domain 475 568 3.2E-21 T 22-04-2016 IPR004154 Anticodon-binding APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 PANTHER PTHR11451 4 244 1.8E-161 T 22-04-2016 APECO1_RS01025 be7f8942eb74449723892ddbcbe4c4cc 572 PANTHER PTHR11451 399 571 1.8E-161 T 22-04-2016 APECO1_RS08000 3382c5e3f4e61a4e1be7ef7b3bffb427 337 Gene3D G3DSA:3.40.50.300 3 237 1.3E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS08000 3382c5e3f4e61a4e1be7ef7b3bffb427 337 SUPERFAMILY SSF50331 240 329 1.64E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS08000 3382c5e3f4e61a4e1be7ef7b3bffb427 337 Pfam PF00005 ABC transporter 21 162 8.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS08000 3382c5e3f4e61a4e1be7ef7b3bffb427 337 SMART SM00382 29 212 4.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS08000 3382c5e3f4e61a4e1be7ef7b3bffb427 337 Pfam PF08402 TOBE domain 257 333 3.8E-17 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APECO1_RS08000 3382c5e3f4e61a4e1be7ef7b3bffb427 337 PANTHER PTHR24220:SF150 6 247 2.7E-133 T 22-04-2016 APECO1_RS08000 3382c5e3f4e61a4e1be7ef7b3bffb427 337 PANTHER PTHR24220 6 247 2.7E-133 T 22-04-2016 APECO1_RS08000 3382c5e3f4e61a4e1be7ef7b3bffb427 337 SUPERFAMILY SSF52540 5 241 7.35E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS08000 3382c5e3f4e61a4e1be7ef7b3bffb427 337 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS15200 e7a77fb9949b978c2ae344f32d06fa2d 149 Pfam PF06610 L-alanine exporter 4 141 1.7E-68 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 APECO1_RS15200 e7a77fb9949b978c2ae344f32d06fa2d 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 2.0E-73 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 APECO1_RS15200 e7a77fb9949b978c2ae344f32d06fa2d 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 34.923 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 APECO1_RS07200 408dfeefb2ec816482ebd671d4d1d4ab 547 PIRSF PIRSF002741 1 543 1.5E-94 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APECO1_RS07200 408dfeefb2ec816482ebd671d4d1d4ab 547 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site APECO1_RS07200 408dfeefb2ec816482ebd671d4d1d4ab 547 Gene3D G3DSA:3.10.105.10 293 508 3.6E-54 T 22-04-2016 APECO1_RS07200 408dfeefb2ec816482ebd671d4d1d4ab 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 457 1.1E-83 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APECO1_RS07200 408dfeefb2ec816482ebd671d4d1d4ab 547 PANTHER PTHR30290 1 547 0.0 T 22-04-2016 APECO1_RS07200 408dfeefb2ec816482ebd671d4d1d4ab 547 Gene3D G3DSA:3.90.76.10 44 223 1.7E-44 T 22-04-2016 APECO1_RS07200 408dfeefb2ec816482ebd671d4d1d4ab 547 PANTHER PTHR30290:SF28 1 547 0.0 T 22-04-2016 APECO1_RS07200 408dfeefb2ec816482ebd671d4d1d4ab 547 SUPERFAMILY SSF53850 36 537 2.35E-133 T 22-04-2016 APECO1_RS09025 b3e0ec9dedda2bfa020a335b06f52759 423 PANTHER PTHR30508 30 418 4.2E-140 T 22-04-2016 APECO1_RS09025 b3e0ec9dedda2bfa020a335b06f52759 423 PANTHER PTHR30508:SF0 30 418 4.2E-140 T 22-04-2016 APECO1_RS09025 b3e0ec9dedda2bfa020a335b06f52759 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 409 5.6E-90 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 APECO1_RS09025 b3e0ec9dedda2bfa020a335b06f52759 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 393 3.8E-69 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APECO1_RS09025 b3e0ec9dedda2bfa020a335b06f52759 423 SUPERFAMILY SSF101960 11 420 5.62E-115 T 22-04-2016 APECO1_RS20320 5564ce4abd1598e41a94c30ac6f888ed 339 Gene3D G3DSA:1.10.3720.10 203 332 8.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS20320 5564ce4abd1598e41a94c30ac6f888ed 339 Gene3D G3DSA:1.10.3720.10 87 162 8.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS20320 5564ce4abd1598e41a94c30ac6f888ed 339 PANTHER PTHR30465:SF0 194 337 3.8E-153 T 22-04-2016 APECO1_RS20320 5564ce4abd1598e41a94c30ac6f888ed 339 PANTHER PTHR30465:SF0 1 169 3.8E-153 T 22-04-2016 APECO1_RS20320 5564ce4abd1598e41a94c30ac6f888ed 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 2.3E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS20320 5564ce4abd1598e41a94c30ac6f888ed 339 PANTHER PTHR30465 194 337 3.8E-153 T 22-04-2016 APECO1_RS20320 5564ce4abd1598e41a94c30ac6f888ed 339 PANTHER PTHR30465 1 169 3.8E-153 T 22-04-2016 APECO1_RS20320 5564ce4abd1598e41a94c30ac6f888ed 339 SUPERFAMILY SSF161098 89 160 1.49E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS20320 5564ce4abd1598e41a94c30ac6f888ed 339 SUPERFAMILY SSF161098 200 322 1.49E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS00340 4cb160688e448a418f6aa74d9d9f13ac 500 PANTHER PTHR38464 2 500 8.3E-244 T 22-04-2016 APECO1_RS00340 4cb160688e448a418f6aa74d9d9f13ac 500 SUPERFAMILY SSF50443 329 497 2.51E-71 T 22-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal APECO1_RS00340 4cb160688e448a418f6aa74d9d9f13ac 500 PANTHER PTHR38464:SF1 2 500 8.3E-244 T 22-04-2016 APECO1_RS00340 4cb160688e448a418f6aa74d9d9f13ac 500 Pfam PF02610 L-arabinose isomerase 5 359 7.9E-180 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APECO1_RS00340 4cb160688e448a418f6aa74d9d9f13ac 500 PIRSF PIRSF001478 1 500 6.2E-260 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APECO1_RS00340 4cb160688e448a418f6aa74d9d9f13ac 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 8.4E-46 T 22-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APECO1_RS00340 4cb160688e448a418f6aa74d9d9f13ac 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.997 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APECO1_RS00340 4cb160688e448a418f6aa74d9d9f13ac 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 303 0.0 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APECO1_RS00340 4cb160688e448a418f6aa74d9d9f13ac 500 SUPERFAMILY SSF53743 1 326 5.23E-126 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 APECO1_RS16880 962813f620f4de9ed7825f07a5af76dc 182 PANTHER PTHR33420 1 182 4.9E-24 T 22-04-2016 APECO1_RS16880 962813f620f4de9ed7825f07a5af76dc 182 Gene3D G3DSA:2.60.40.1090 30 182 9.3E-38 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS16880 962813f620f4de9ed7825f07a5af76dc 182 SUPERFAMILY SSF49401 31 182 2.34E-36 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS16880 962813f620f4de9ed7825f07a5af76dc 182 Pfam PF00419 Fimbrial protein 32 182 2.4E-16 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS09860 eda5dee7e7f56e3874c10c3ee4dcad95 124 PANTHER PTHR34820 2 123 8.3E-13 T 22-04-2016 APECO1_RS09860 eda5dee7e7f56e3874c10c3ee4dcad95 124 Pfam PF04234 CopC domain 27 123 2.4E-27 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 APECO1_RS09860 eda5dee7e7f56e3874c10c3ee4dcad95 124 SUPERFAMILY SSF81296 26 124 3.29E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set APECO1_RS09860 eda5dee7e7f56e3874c10c3ee4dcad95 124 Gene3D G3DSA:2.60.40.1220 26 124 1.1E-32 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like APECO1_RS11435 fbf2c72bb12d39b5535a3321e981738d 379 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 165 4.4E-27 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APECO1_RS11435 fbf2c72bb12d39b5535a3321e981738d 379 Gene3D G3DSA:1.20.5.70 347 379 6.8E-20 T 22-04-2016 APECO1_RS11435 fbf2c72bb12d39b5535a3321e981738d 379 PANTHER PTHR33619 1 379 1.5E-98 T 22-04-2016 APECO1_RS11435 fbf2c72bb12d39b5535a3321e981738d 379 PANTHER PTHR33619:SF3 1 379 1.5E-98 T 22-04-2016 APECO1_RS11435 fbf2c72bb12d39b5535a3321e981738d 379 Pfam PF10531 SLBB domain 173 220 3.7E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain APECO1_RS11435 fbf2c72bb12d39b5535a3321e981738d 379 Gene3D G3DSA:3.10.560.10 165 244 6.8E-28 T 22-04-2016 APECO1_RS11435 fbf2c72bb12d39b5535a3321e981738d 379 Gene3D G3DSA:3.30.1950.10 89 164 9.1E-33 T 22-04-2016 APECO1_RS11435 fbf2c72bb12d39b5535a3321e981738d 379 Gene3D G3DSA:3.10.560.10 245 346 2.8E-32 T 22-04-2016 APECO1_RS05065 95715d67bd54b0779e8d1a0fd59e5a8d 413 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 31 45 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site APECO1_RS05065 95715d67bd54b0779e8d1a0fd59e5a8d 413 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 305 321 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site APECO1_RS05065 95715d67bd54b0779e8d1a0fd59e5a8d 413 PANTHER PTHR11567 1 412 7.4E-305 T 22-04-2016 APECO1_RS05065 95715d67bd54b0779e8d1a0fd59e5a8d 413 Gene3D G3DSA:3.40.50.1240 142 274 3.1E-69 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS05065 95715d67bd54b0779e8d1a0fd59e5a8d 413 Gene3D G3DSA:3.40.50.1240 26 141 4.6E-85 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS05065 95715d67bd54b0779e8d1a0fd59e5a8d 413 Gene3D G3DSA:3.40.50.1240 276 412 4.6E-85 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS05065 95715d67bd54b0779e8d1a0fd59e5a8d 413 SUPERFAMILY SSF53254 24 411 4.37E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS05065 95715d67bd54b0779e8d1a0fd59e5a8d 413 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 31 363 1.5E-16 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 APECO1_RS05065 95715d67bd54b0779e8d1a0fd59e5a8d 413 PANTHER PTHR11567:SF135 1 412 7.4E-305 T 22-04-2016 APECO1_RS17815 156c74a819310a37acc000dd442bcd5f 302 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 13 286 1.7E-123 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APECO1_RS17815 156c74a819310a37acc000dd442bcd5f 302 PANTHER PTHR30389 1 301 1.9E-221 T 22-04-2016 APECO1_RS17815 156c74a819310a37acc000dd442bcd5f 302 PANTHER PTHR30389:SF3 1 301 1.9E-221 T 22-04-2016 APECO1_RS17815 156c74a819310a37acc000dd442bcd5f 302 Pfam PF05681 Fumarate hydratase (Fumerase) 15 283 2.2E-79 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APECO1_RS09345 d307fd1f4b02e584914447cc7d686a8f 161 PIRSF PIRSF034445 1 152 5.6E-30 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 APECO1_RS09345 d307fd1f4b02e584914447cc7d686a8f 161 PANTHER PTHR38102 1 160 1.4E-72 T 22-04-2016 APECO1_RS09345 d307fd1f4b02e584914447cc7d686a8f 161 Pfam PF07813 LTXXQ motif family protein 46 141 1.8E-23 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 APECO1_RS09345 d307fd1f4b02e584914447cc7d686a8f 161 PANTHER PTHR38102:SF1 1 160 1.4E-72 T 22-04-2016 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF53738 156 256 3.49E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF53738 258 365 2.28E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF53738 2 181 1.41E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.40.120.10 251 358 2.1E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.40.120.10 176 250 5.1E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 3.5E-21 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 8.2E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 8.2E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 8.2E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 SUPERFAMILY SSF55957 357 444 1.44E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 2.7E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.1E-197 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.40.120.10 4 151 6.8E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 9.4E-33 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 PANTHER PTHR22573 1 444 4.7E-187 T 22-04-2016 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 PANTHER PTHR22573:SF15 1 444 4.7E-187 T 22-04-2016 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 3.0E-45 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 Gene3D G3DSA:3.30.310.50 359 443 1.5E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS18330 4f8341aabbec408d6262598eee5cb3ed 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.805 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.165 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 PIRSF PIRSF000495 1 196 2.5E-62 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 SUPERFAMILY SSF52317 3 195 7.91E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 9.7E-75 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 22-04-2016 APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 22-04-2016 APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 Pfam PF00117 Glutamine amidotransferase class-I 7 194 1.6E-17 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 PANTHER PTHR21235 2 196 2.3E-90 T 22-04-2016 APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 Gene3D G3DSA:3.40.50.880 1 196 5.1E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS11250 238e25162c0a2ea5ef8b1029e602d964 196 PANTHER PTHR21235:SF1 2 196 2.3E-90 T 22-04-2016 APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 1.1E-90 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 SUPERFAMILY SSF53850 1 242 1.03E-73 T 22-04-2016 APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 SMART SM00062 22 242 2.2E-88 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 PANTHER PTHR18966 23 241 9.3E-99 T 22-04-2016 APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 8.5E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 Gene3D G3DSA:3.40.190.10 109 201 8.2E-30 T 22-04-2016 APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 SMART SM00079 22 243 4.2E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 PANTHER PTHR18966:SF194 23 241 9.3E-99 T 22-04-2016 APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 Gene3D G3DSA:3.40.190.10 203 242 1.2E-43 T 22-04-2016 APECO1_RS04185 fc2e3f0be510d1db6d6f645aabe33119 243 Gene3D G3DSA:3.40.190.10 20 108 1.2E-43 T 22-04-2016 APECO1_RS08855 bd04f257fe57586caa21ef7a343b7066 365 SUPERFAMILY SSF51395 4 364 2.84E-121 T 22-04-2016 APECO1_RS08855 bd04f257fe57586caa21ef7a343b7066 365 Gene3D G3DSA:3.20.20.70 4 364 7.2E-134 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS08855 bd04f257fe57586caa21ef7a343b7066 365 PANTHER PTHR22893 1 365 5.7E-167 T 22-04-2016 APECO1_RS08855 bd04f257fe57586caa21ef7a343b7066 365 PANTHER PTHR22893:SF14 1 365 5.7E-167 T 22-04-2016 APECO1_RS08855 bd04f257fe57586caa21ef7a343b7066 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 2.3E-88 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APECO1_RS09820 70415641c739d1fe356a79d662b096f6 877 PANTHER PTHR30462 1 877 0.0 T 22-04-2016 APECO1_RS09820 70415641c739d1fe356a79d662b096f6 877 Pfam PF02470 MlaD protein 747 810 3.0E-8 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS09820 70415641c739d1fe356a79d662b096f6 877 Pfam PF02470 MlaD protein 163 220 2.6E-6 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS09820 70415641c739d1fe356a79d662b096f6 877 Pfam PF02470 MlaD protein 394 455 8.8E-6 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS09820 70415641c739d1fe356a79d662b096f6 877 Pfam PF02470 MlaD protein 636 724 5.5E-10 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS09820 70415641c739d1fe356a79d662b096f6 877 Pfam PF02470 MlaD protein 46 137 9.5E-17 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS09820 70415641c739d1fe356a79d662b096f6 877 Pfam PF02470 MlaD protein 281 351 1.6E-7 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS09820 70415641c739d1fe356a79d662b096f6 877 PANTHER PTHR30462:SF0 1 877 0.0 T 22-04-2016 APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 PANTHER PTHR11444 4 455 0.0 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 Gene3D G3DSA:1.10.275.10 1 119 1.9E-49 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 PANTHER PTHR11444:SF17 4 455 0.0 T 22-04-2016 APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 SUPERFAMILY SSF48557 10 454 1.51E-106 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 Pfam PF00206 Lyase 14 312 1.3E-84 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 Gene3D G3DSA:1.20.200.10 120 389 1.4E-88 T 22-04-2016 APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.0E-158 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 Gene3D G3DSA:1.10.40.30 390 445 1.0E-34 T 22-04-2016 APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.9E-17 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS05710 e9aa450376adf1e4b540ca778f8d58a5 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.4E-52 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 PANTHER PTHR11811:SF25 1 466 9.7E-304 T 22-04-2016 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 PIRSF PIRSF000109 1 468 6.4E-243 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 PANTHER PTHR11811 1 466 9.7E-304 T 22-04-2016 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 Gene3D G3DSA:3.40.50.720 1 180 3.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 3.1E-232 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 4.0E-132 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 SUPERFAMILY SSF48179 177 467 1.09E-131 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 SMART SM01350 179 467 2.2E-223 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 Gene3D G3DSA:1.20.5.320 436 467 1.4E-22 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 Gene3D G3DSA:1.10.1040.10 181 433 2.6E-119 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 5.2E-51 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 SUPERFAMILY SSF51735 4 173 7.36E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.52E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.52E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.52E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.52E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.52E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS11280 7b58157f0cbf6859ab86b2371ef2fc4a 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.52E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APECO1_RS17435 457193e616ecb2224cfaa4aff753d7e3 346 PANTHER PTHR11732:SF191 13 330 1.6E-184 T 22-04-2016 APECO1_RS17435 457193e616ecb2224cfaa4aff753d7e3 346 SUPERFAMILY SSF51430 13 331 6.42E-89 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS17435 457193e616ecb2224cfaa4aff753d7e3 346 Pfam PF00248 Aldo/keto reductase family 28 332 8.2E-80 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS17435 457193e616ecb2224cfaa4aff753d7e3 346 PANTHER PTHR11732 13 330 1.6E-184 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS17435 457193e616ecb2224cfaa4aff753d7e3 346 Gene3D G3DSA:3.20.20.100 13 331 2.6E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 PANTHER PTHR21363:SF0 88 371 2.1E-83 T 22-04-2016 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 Pfam PF01817 Chorismate mutase type II 9 86 1.3E-19 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 Gene3D G3DSA:1.10.3660.10 248 372 1.6E-58 T 22-04-2016 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 Gene3D G3DSA:1.20.59.10 3 83 2.0E-22 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 SUPERFAMILY SSF51735 91 238 3.23E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 PIRSF PIRSF001499 1 373 6.3E-187 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 Gene3D G3DSA:3.40.50.720 84 247 2.7E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 SMART SM00830 9 89 2.9E-30 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 SUPERFAMILY SSF48179 241 366 2.04E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 PANTHER PTHR21363 88 371 2.1E-83 T 22-04-2016 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 SUPERFAMILY SSF48600 4 88 4.03E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 Pfam PF02153 Prephenate dehydrogenase 137 344 1.9E-31 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 APECO1_RS14730 e20cf6d1eec97b2272332f8eaf8a74da 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.3E-46 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 SUPERFAMILY SSF51445 2 472 7.33E-162 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 Gene3D G3DSA:3.20.20.80 3 477 1.9E-148 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 Pfam PF00232 Glycosyl hydrolase family 1 4 476 1.0E-129 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 PANTHER PTHR10353:SF35 4 479 7.4E-231 T 22-04-2016 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 1.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 1.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 307 321 1.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 1.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 1.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 PANTHER PTHR10353 4 479 7.4E-231 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS08405 690028cbe3074e88e3e785e0abeb798a 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APECO1_RS14990 942006103b6f6c31135d47a3f944d1fd 164 Pfam PF05119 Phage terminase, small subunit 58 146 3.6E-20 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family APECO1_RS14990 942006103b6f6c31135d47a3f944d1fd 164 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 45 158 1.0E-20 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family APECO1_RS14870 d25963f4ef053360f98e74a0e06017b6 200 PANTHER PTHR34413 11 200 2.3E-43 T 22-04-2016 APECO1_RS14870 d25963f4ef053360f98e74a0e06017b6 200 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 78 199 5.6E-24 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 PANTHER PTHR11938 1 31 5.3E-134 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 PANTHER PTHR11938 134 143 5.3E-134 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 PANTHER PTHR11938 170 458 5.3E-134 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 SUPERFAMILY SSF54862 1 503 2.3E-181 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 2.6E-296 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 Gene3D G3DSA:3.30.70.20 236 358 1.3E-77 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 Gene3D G3DSA:3.30.70.20 437 466 1.3E-77 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 PANTHER PTHR11938:SF83 1 31 5.3E-134 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 PANTHER PTHR11938:SF83 134 143 5.3E-134 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 PANTHER PTHR11938:SF83 170 458 5.3E-134 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 Gene3D G3DSA:3.30.70.20 159 195 5.9E-12 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 Gene3D G3DSA:3.30.70.20 10 26 5.9E-12 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 Gene3D G3DSA:3.30.70.20 196 235 4.2E-25 T 22-04-2016 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.2E-37 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 9.9E-30 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 APECO1_RS08135 afe68498919ebcda3a82a424424cea11 514 Gene3D G3DSA:1.10.3650.10 359 435 3.9E-31 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 APECO1_RS00995 59a93f479027078da442c7b96d42cb69 86 SUPERFAMILY SSF101744 1 85 3.5E-29 T 22-04-2016 IPR023534 Rof/RNase P-like APECO1_RS00995 59a93f479027078da442c7b96d42cb69 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 6.0E-29 T 22-04-2016 IPR009778 Modulator of Rho-dependent transcription termination APECO1_RS20520 b85a14675ede97a51e3c9f97609ae841 328 PANTHER PTHR33376:SF2 1 328 2.6E-141 T 22-04-2016 APECO1_RS20520 b85a14675ede97a51e3c9f97609ae841 328 PANTHER PTHR33376 1 328 2.6E-141 T 22-04-2016 APECO1_RS20520 b85a14675ede97a51e3c9f97609ae841 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 312 3.3E-105 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 APECO1_RS20520 b85a14675ede97a51e3c9f97609ae841 328 SUPERFAMILY SSF53850 134 263 2.01E-5 T 22-04-2016 APECO1_RS20520 b85a14675ede97a51e3c9f97609ae841 328 PIRSF PIRSF006470 3 328 1.3E-102 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APECO1_RS20520 b85a14675ede97a51e3c9f97609ae841 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 286 2.6E-111 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APECO1_RS20990 868ed4816fde8cabe8766dc9dfc1378c 439 Pfam PF07690 Major Facilitator Superfamily 35 396 1.4E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS20990 868ed4816fde8cabe8766dc9dfc1378c 439 PANTHER PTHR11662 3 434 5.2E-244 T 22-04-2016 APECO1_RS20990 868ed4816fde8cabe8766dc9dfc1378c 439 PANTHER PTHR11662:SF286 3 434 5.2E-244 T 22-04-2016 APECO1_RS20990 868ed4816fde8cabe8766dc9dfc1378c 439 PIRSF PIRSF002808 6 439 2.9E-157 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS20990 868ed4816fde8cabe8766dc9dfc1378c 439 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 6.8E-153 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS20990 868ed4816fde8cabe8766dc9dfc1378c 439 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 APECO1_RS20990 868ed4816fde8cabe8766dc9dfc1378c 439 SUPERFAMILY SSF103473 16 432 2.49E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS20990 868ed4816fde8cabe8766dc9dfc1378c 439 Gene3D G3DSA:1.20.1250.20 21 210 2.6E-48 T 22-04-2016 APECO1_RS20990 868ed4816fde8cabe8766dc9dfc1378c 439 Gene3D G3DSA:1.20.1250.20 243 434 7.3E-37 T 22-04-2016 APECO1_RS22310 c99947d21a1fb44906dc1d9055b5af56 327 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 1.2E-115 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APECO1_RS22310 c99947d21a1fb44906dc1d9055b5af56 327 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 314 1.2E-186 T 22-04-2016 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 APECO1_RS22310 c99947d21a1fb44906dc1d9055b5af56 327 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 41.586 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APECO1_RS22310 c99947d21a1fb44906dc1d9055b5af56 327 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 327 2.0E-136 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APECO1_RS17520 821f64082c1046bfbb4501bc349612f5 338 SUPERFAMILY SSF50129 1 170 6.54E-48 T 22-04-2016 IPR011032 GroES-like APECO1_RS17520 821f64082c1046bfbb4501bc349612f5 338 SUPERFAMILY SSF51735 138 302 8.42E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17520 821f64082c1046bfbb4501bc349612f5 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 9.1E-30 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS17520 821f64082c1046bfbb4501bc349612f5 338 PANTHER PTHR11695:SF38 12 338 3.5E-105 T 22-04-2016 APECO1_RS17520 821f64082c1046bfbb4501bc349612f5 338 Pfam PF00107 Zinc-binding dehydrogenase 171 297 1.1E-19 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS17520 821f64082c1046bfbb4501bc349612f5 338 PANTHER PTHR11695 12 338 3.5E-105 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS17520 821f64082c1046bfbb4501bc349612f5 338 Gene3D G3DSA:3.40.50.720 164 281 5.9E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17520 821f64082c1046bfbb4501bc349612f5 338 Gene3D G3DSA:3.90.180.10 1 163 4.0E-54 T 22-04-2016 IPR011032 GroES-like APECO1_RS20555 e1c967b9e44798078423a57e782536bb 383 PANTHER PTHR11496 1 383 4.1E-274 T 22-04-2016 APECO1_RS20555 e1c967b9e44798078423a57e782536bb 383 PANTHER PTHR11496:SF78 1 383 4.1E-274 T 22-04-2016 APECO1_RS20555 e1c967b9e44798078423a57e782536bb 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS20555 e1c967b9e44798078423a57e782536bb 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 1.7E-122 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS20555 e1c967b9e44798078423a57e782536bb 383 Gene3D G3DSA:3.40.50.1970 3 184 9.9E-60 T 22-04-2016 APECO1_RS20555 e1c967b9e44798078423a57e782536bb 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS20555 e1c967b9e44798078423a57e782536bb 383 SUPERFAMILY SSF56796 5 382 1.31E-134 T 22-04-2016 APECO1_RS20555 e1c967b9e44798078423a57e782536bb 383 Gene3D G3DSA:1.20.1090.10 185 383 3.6E-76 T 22-04-2016 APECO1_RS08145 e66cbe76ebcdf3c7280b4ae3c68ed521 462 SUPERFAMILY SSF103473 17 457 5.1E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS08145 e66cbe76ebcdf3c7280b4ae3c68ed521 462 Gene3D G3DSA:1.20.1250.20 254 455 1.7E-10 T 22-04-2016 APECO1_RS08145 e66cbe76ebcdf3c7280b4ae3c68ed521 462 Gene3D G3DSA:1.20.1250.20 29 229 9.4E-16 T 22-04-2016 APECO1_RS08145 e66cbe76ebcdf3c7280b4ae3c68ed521 462 Pfam PF07690 Major Facilitator Superfamily 43 419 3.7E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS08145 e66cbe76ebcdf3c7280b4ae3c68ed521 462 TIGRFAM TIGR00886 2A0108: nitrite transporter 34 415 2.3E-102 T 22-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 APECO1_RS08145 e66cbe76ebcdf3c7280b4ae3c68ed521 462 PANTHER PTHR23515:SF1 15 374 4.2E-268 T 22-04-2016 APECO1_RS08145 e66cbe76ebcdf3c7280b4ae3c68ed521 462 PANTHER PTHR23515:SF1 394 456 4.2E-268 T 22-04-2016 APECO1_RS08145 e66cbe76ebcdf3c7280b4ae3c68ed521 462 PANTHER PTHR23515 15 374 4.2E-268 T 22-04-2016 APECO1_RS08145 e66cbe76ebcdf3c7280b4ae3c68ed521 462 PANTHER PTHR23515 394 456 4.2E-268 T 22-04-2016 APECO1_RS13285 1230e2f447bfba21e374242bf4f39565 127 SUPERFAMILY SSF50249 23 127 3.77E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS13285 1230e2f447bfba21e374242bf4f39565 127 Gene3D G3DSA:2.40.50.140 17 127 3.3E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04455 0b6a8592e4c8c8f89fd9b2b7435e18b2 91 ProDom PD029230 GPA 5'REGION GP83 ORF83 GENE GP45 BACTERIOPHAGE SIMILAR ORF4 3 78 4.0E-39 T 22-04-2016 IPR020284 Protein of unknown function CP83 APECO1_RS04280 40194e910395b9d630d888bcd2ff269b 371 PANTHER PTHR30572:SF10 1 362 4.5E-249 T 22-04-2016 IPR030190 Macrolide export protein MacA GO:0006810|GO:0019898|GO:0022891 APECO1_RS04280 40194e910395b9d630d888bcd2ff269b 371 SUPERFAMILY SSF111369 52 299 6.02E-28 T 22-04-2016 APECO1_RS04280 40194e910395b9d630d888bcd2ff269b 371 Gene3D G3DSA:2.40.50.100 183 214 2.9E-13 T 22-04-2016 APECO1_RS04280 40194e910395b9d630d888bcd2ff269b 371 Gene3D G3DSA:2.40.50.100 61 94 2.9E-13 T 22-04-2016 APECO1_RS04280 40194e910395b9d630d888bcd2ff269b 371 PANTHER PTHR30572 1 362 4.5E-249 T 22-04-2016 APECO1_RS04280 40194e910395b9d630d888bcd2ff269b 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 362 6.4E-58 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS04280 40194e910395b9d630d888bcd2ff269b 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 3.8E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS08440 0ac8b7d9c701ce8bdd4c795d188bd6d7 395 Gene3D G3DSA:1.20.1250.20 205 382 2.1E-8 T 22-04-2016 APECO1_RS08440 0ac8b7d9c701ce8bdd4c795d188bd6d7 395 Gene3D G3DSA:1.20.1250.20 8 185 3.1E-24 T 22-04-2016 APECO1_RS08440 0ac8b7d9c701ce8bdd4c795d188bd6d7 395 SUPERFAMILY SSF103473 7 384 2.75E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS08440 0ac8b7d9c701ce8bdd4c795d188bd6d7 395 PANTHER PTHR23535 1 395 0.0 T 22-04-2016 APECO1_RS08440 0ac8b7d9c701ce8bdd4c795d188bd6d7 395 Pfam PF07690 Major Facilitator Superfamily 13 343 1.1E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS08440 0ac8b7d9c701ce8bdd4c795d188bd6d7 395 PANTHER PTHR23535:SF1 1 395 0.0 T 22-04-2016 APECO1_RS05520 10c00c0561de7dcf4030f0d748031d11 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.327 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APECO1_RS05520 10c00c0561de7dcf4030f0d748031d11 78 Gene3D G3DSA:1.10.1200.10 3 77 8.4E-37 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS05520 10c00c0561de7dcf4030f0d748031d11 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.1E-38 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APECO1_RS05520 10c00c0561de7dcf4030f0d748031d11 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.2E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS05520 10c00c0561de7dcf4030f0d748031d11 78 PANTHER PTHR20863 4 73 7.3E-32 T 22-04-2016 APECO1_RS05520 10c00c0561de7dcf4030f0d748031d11 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site APECO1_RS05520 10c00c0561de7dcf4030f0d748031d11 78 SUPERFAMILY SSF47336 2 77 1.44E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS05520 10c00c0561de7dcf4030f0d748031d11 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APECO1_RS27385 a13c53bfc324195e1b06369dae146198 73 PANTHER PTHR32027:SF8 41 73 3.6E-12 T 22-04-2016 APECO1_RS27385 a13c53bfc324195e1b06369dae146198 73 PANTHER PTHR32027 41 73 3.6E-12 T 22-04-2016 APECO1_RS25275 431dcca1db6ec9e991d225fae377c0b1 383 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 214 312 3.2E-30 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family APECO1_RS25275 431dcca1db6ec9e991d225fae377c0b1 383 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 223 308 3.8E-29 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family APECO1_RS25275 431dcca1db6ec9e991d225fae377c0b1 383 Pfam PF10554 Ash protein family 117 213 2.3E-12 T 22-04-2016 IPR018880 Bacteriophage P4, Ash protein APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 46.363 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 Gene3D G3DSA:3.30.572.10 1 264 5.3E-137 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.61E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.61E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.61E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.61E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.61E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.8E-42 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 8.1E-94 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 Pfam PF00303 Thymidylate synthase 2 264 2.2E-125 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 SUPERFAMILY SSF55831 1 264 1.83E-132 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APECO1_RS16170 188a9c3fc4031be2e94cdf304e4a6cb2 264 PANTHER PTHR11548 1 264 1.2E-202 T 22-04-2016 APECO1_RS11680 714c11d5b027ed67a666bf1281d115a7 91 Pfam PF10743 Regulatory phage protein cox 2 87 6.9E-42 T 22-04-2016 IPR019679 Bacteriophage P2, regulatory protein Cox APECO1_RS04425 5ebbbc51fa6f88ff2fbd8af844e3e457 103 SUPERFAMILY SSF47413 7 56 3.1E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS04425 5ebbbc51fa6f88ff2fbd8af844e3e457 103 Pfam PF01381 Helix-turn-helix 14 46 1.4E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS04425 5ebbbc51fa6f88ff2fbd8af844e3e457 103 SMART SM00530 12 69 0.0058 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS04425 5ebbbc51fa6f88ff2fbd8af844e3e457 103 Gene3D G3DSA:1.10.260.40 9 52 2.2E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS02815 e5704c505cde9a2250532866f3724f28 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 3.0E-11 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS02815 e5704c505cde9a2250532866f3724f28 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 3.0E-11 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS02815 e5704c505cde9a2250532866f3724f28 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 22-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 APECO1_RS02815 e5704c505cde9a2250532866f3724f28 50 Pfam PF01848 Hok/gef family 5 46 4.1E-17 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS02815 e5704c505cde9a2250532866f3724f28 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 2.0E-20 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS05420 18a635cda0910181c6ca37d44a0e261a 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 3.3E-52 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 APECO1_RS05420 18a635cda0910181c6ca37d44a0e261a 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 1.5E-12 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APECO1_RS05420 18a635cda0910181c6ca37d44a0e261a 134 Pfam PF00460 Flagella basal body rod protein 7 37 1.1E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APECO1_RS05420 18a635cda0910181c6ca37d44a0e261a 134 PANTHER PTHR30435:SF2 1 134 2.4E-69 T 22-04-2016 APECO1_RS05420 18a635cda0910181c6ca37d44a0e261a 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APECO1_RS05420 18a635cda0910181c6ca37d44a0e261a 134 PANTHER PTHR30435 1 134 2.4E-69 T 22-04-2016 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 Pfam PF00696 Amino acid kinase family 4 296 5.1E-25 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PIRSF PIRSF000723 1 315 1.5E-129 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PRINTS PR01469 Bacterial carbamate kinase signature 77 95 4.0E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 4.0E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PRINTS PR01469 Bacterial carbamate kinase signature 161 180 4.0E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PRINTS PR01469 Bacterial carbamate kinase signature 270 285 4.0E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PRINTS PR01469 Bacterial carbamate kinase signature 215 230 4.0E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PRINTS PR01469 Bacterial carbamate kinase signature 184 202 4.0E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 4.0E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 Gene3D G3DSA:3.40.1160.10 1 315 1.6E-98 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 SUPERFAMILY SSF53633 3 313 2.36E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PANTHER PTHR30409:SF1 1 316 1.4E-143 T 22-04-2016 APECO1_RS01725 579f7e6e8ed56cf06e559b135766999b 316 PANTHER PTHR30409 1 316 1.4E-143 T 22-04-2016 APECO1_RS15605 4234d7b268b94820b26c4a45b8a10d98 379 SMART SM00257 122 166 9.3E-12 T 22-04-2016 IPR018392 LysM domain APECO1_RS15605 4234d7b268b94820b26c4a45b8a10d98 379 PANTHER PTHR21666 233 377 2.1E-57 T 22-04-2016 APECO1_RS15605 4234d7b268b94820b26c4a45b8a10d98 379 PANTHER PTHR21666:SF222 233 377 2.1E-57 T 22-04-2016 APECO1_RS15605 4234d7b268b94820b26c4a45b8a10d98 379 Pfam PF01551 Peptidase family M23 279 372 1.2E-31 T 22-04-2016 IPR016047 Peptidase M23 APECO1_RS15605 4234d7b268b94820b26c4a45b8a10d98 379 Gene3D G3DSA:3.10.350.10 121 165 6.7E-12 T 22-04-2016 IPR018392 LysM domain APECO1_RS15605 4234d7b268b94820b26c4a45b8a10d98 379 SUPERFAMILY SSF51261 122 376 1.36E-53 T 22-04-2016 IPR011055 Duplicated hybrid motif APECO1_RS15605 4234d7b268b94820b26c4a45b8a10d98 379 Pfam PF01476 LysM domain 123 165 2.2E-10 T 22-04-2016 IPR018392 LysM domain APECO1_RS15605 4234d7b268b94820b26c4a45b8a10d98 379 Gene3D G3DSA:2.70.70.10 244 377 4.1E-42 T 22-04-2016 APECO1_RS08760 a8ae4f4d1e4593d9cf8b2010756fe5c2 231 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 5.7E-62 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APECO1_RS08760 a8ae4f4d1e4593d9cf8b2010756fe5c2 231 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.253 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APECO1_RS08760 a8ae4f4d1e4593d9cf8b2010756fe5c2 231 PIRSF PIRSF006102 1 219 4.1E-79 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APECO1_RS08760 a8ae4f4d1e4593d9cf8b2010756fe5c2 231 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 9.3E-81 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APECO1_RS08760 a8ae4f4d1e4593d9cf8b2010756fe5c2 231 PANTHER PTHR30586 1 220 3.3E-141 T 22-04-2016 APECO1_RS08760 a8ae4f4d1e4593d9cf8b2010756fe5c2 231 PANTHER PTHR30586:SF0 1 220 3.3E-141 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APECO1_RS04110 e389f09f9cd3ecd1b3a2499193806674 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.8E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS04110 e389f09f9cd3ecd1b3a2499193806674 178 SUPERFAMILY SSF48498 98 175 2.72E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS04110 e389f09f9cd3ecd1b3a2499193806674 178 PANTHER PTHR30055:SF91 1 178 1.9E-98 T 22-04-2016 APECO1_RS04110 e389f09f9cd3ecd1b3a2499193806674 178 SUPERFAMILY SSF46689 2 81 1.69E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS04110 e389f09f9cd3ecd1b3a2499193806674 178 Gene3D G3DSA:1.10.357.10 8 176 2.0E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS04110 e389f09f9cd3ecd1b3a2499193806674 178 PANTHER PTHR30055 1 178 1.9E-98 T 22-04-2016 APECO1_RS15530 b547137867e42eca27872a20626616b7 336 SUPERFAMILY SSF56042 163 331 1.5E-39 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS15530 b547137867e42eca27872a20626616b7 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 313 8.9E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS15530 b547137867e42eca27872a20626616b7 336 Gene3D G3DSA:3.30.1330.10 15 155 1.6E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS15530 b547137867e42eca27872a20626616b7 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 3 336 4.4E-141 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE APECO1_RS15530 b547137867e42eca27872a20626616b7 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 152 1.4E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APECO1_RS15530 b547137867e42eca27872a20626616b7 336 SUPERFAMILY SSF55326 3 156 1.24E-32 T 22-04-2016 APECO1_RS15530 b547137867e42eca27872a20626616b7 336 PIRSF PIRSF005644 1 336 6.4E-123 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE APECO1_RS15530 b547137867e42eca27872a20626616b7 336 Gene3D G3DSA:3.90.650.10 165 316 2.6E-24 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APECO1_RS15530 b547137867e42eca27872a20626616b7 336 PANTHER PTHR30303 1 336 1.0E-168 T 22-04-2016 APECO1_RS15530 b547137867e42eca27872a20626616b7 336 PANTHER PTHR30303:SF0 1 336 1.0E-168 T 22-04-2016 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 35.068 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 Gene3D G3DSA:3.40.1390.10 4 103 9.1E-34 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 1.5E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 7.1E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 6.2E-166 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 PANTHER PTHR23135 9 491 6.5E-233 T 22-04-2016 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 Gene3D G3DSA:3.90.190.20 343 484 6.3E-59 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 Gene3D G3DSA:3.40.1190.10 105 342 2.3E-83 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 Pfam PF08245 Mur ligase middle domain 114 318 7.4E-52 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 PANTHER PTHR23135:SF4 9 491 6.5E-233 T 22-04-2016 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 SUPERFAMILY SSF53623 105 338 4.58E-80 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 SUPERFAMILY SSF63418 5 103 1.7E-22 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS00465 d7a4be3b41c79aabdef82b862f6086eb 495 SUPERFAMILY SSF53244 339 491 2.44E-51 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 153 182 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 Pfam PF00549 CoA-ligase 152 266 3.3E-18 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 PANTHER PTHR11117 1 290 5.9E-186 T 22-04-2016 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 PRINTS PR01798 Succinyl-CoA synthase signature 209 222 1.7E-38 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 1.7E-38 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.7E-38 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 PRINTS PR01798 Succinyl-CoA synthase signature 178 196 1.7E-38 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 SUPERFAMILY SSF51735 1 123 1.65E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 SUPERFAMILY SSF52210 124 287 1.2E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 PIRSF PIRSF001553 1 290 1.2E-129 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 SMART SM00881 4 100 2.0E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 Pfam PF02629 CoA binding domain 6 99 2.1E-29 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 Gene3D G3DSA:3.40.50.261 121 287 5.0E-74 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 Gene3D G3DSA:3.40.50.720 2 120 3.6E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS23180 a8da423d3c3cd0dafb277e2b67a537d5 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 7.3E-139 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APECO1_RS25115 5ce7c042a04f5f2a9a791b02edf1f2af 550 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 548 1.5E-158 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 APECO1_RS25115 5ce7c042a04f5f2a9a791b02edf1f2af 550 Pfam PF00999 Sodium/hydrogen exchanger family 7 419 2.2E-66 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APECO1_RS25115 5ce7c042a04f5f2a9a791b02edf1f2af 550 PANTHER PTHR10110:SF120 1 548 4.3E-163 T 22-04-2016 APECO1_RS25115 5ce7c042a04f5f2a9a791b02edf1f2af 550 PANTHER PTHR10110 1 548 4.3E-163 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 Pfam PF01264 Chorismate synthase 10 345 2.0E-143 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.3E-140 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.962 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 Gene3D G3DSA:3.60.150.10 9 352 1.4E-161 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 PIRSF PIRSF001456 3 359 2.4E-142 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 PANTHER PTHR21085 2 351 2.5E-225 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 SUPERFAMILY SSF103263 4 353 2.88E-149 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12930 5087133bae9a11cb791c55ad439fccc0 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS10155 60dc0244e61b9d9d23b4a68998386248 167 PANTHER PTHR11431 1 164 2.1E-61 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS10155 60dc0244e61b9d9d23b4a68998386248 167 Gene3D G3DSA:1.20.1260.10 3 162 6.4E-37 T 22-04-2016 IPR012347 Ferritin-related APECO1_RS10155 60dc0244e61b9d9d23b4a68998386248 167 SUPERFAMILY SSF47240 9 158 3.95E-35 T 22-04-2016 IPR009078 Ferritin-like superfamily APECO1_RS10155 60dc0244e61b9d9d23b4a68998386248 167 Pfam PF00210 Ferritin-like domain 9 142 1.6E-25 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APECO1_RS10155 60dc0244e61b9d9d23b4a68998386248 167 PANTHER PTHR11431:SF40 1 164 2.1E-61 T 22-04-2016 APECO1_RS00060 2c1d4421ac9f882f8ab79287db34100d 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 APECO1_RS00060 2c1d4421ac9f882f8ab79287db34100d 188 Pfam PF01184 GPR1/FUN34/yaaH family 4 177 1.5E-41 T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 APECO1_RS00060 2c1d4421ac9f882f8ab79287db34100d 188 PANTHER PTHR30178 1 186 1.1E-129 T 22-04-2016 APECO1_RS00060 2c1d4421ac9f882f8ab79287db34100d 188 PANTHER PTHR30178:SF6 1 186 1.1E-129 T 22-04-2016 APECO1_RS18415 e49f79e31d9df52e18a789af3b13a1f3 183 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 1.0E-55 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 APECO1_RS18415 e49f79e31d9df52e18a789af3b13a1f3 183 Pfam PF02470 MlaD protein 39 116 1.3E-21 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS18415 e49f79e31d9df52e18a789af3b13a1f3 183 PANTHER PTHR33371 1 165 1.3E-51 T 22-04-2016 APECO1_RS03885 5b8f74d9c266495e0e9a5255b19aa15f 361 PANTHER PTHR11091:SF2 1 356 1.2E-257 T 22-04-2016 APECO1_RS03885 5b8f74d9c266495e0e9a5255b19aa15f 361 Gene3D G3DSA:1.20.5.460 282 309 1.4E-21 T 22-04-2016 APECO1_RS03885 5b8f74d9c266495e0e9a5255b19aa15f 361 Gene3D G3DSA:1.10.1530.10 6 75 1.6E-21 T 22-04-2016 APECO1_RS03885 5b8f74d9c266495e0e9a5255b19aa15f 361 Pfam PF02615 Malate/L-lactate dehydrogenase 8 338 4.9E-114 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS03885 5b8f74d9c266495e0e9a5255b19aa15f 361 SUPERFAMILY SSF89733 6 349 2.62E-107 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS03885 5b8f74d9c266495e0e9a5255b19aa15f 361 Gene3D G3DSA:3.30.1370.60 76 280 1.1E-81 T 22-04-2016 APECO1_RS03885 5b8f74d9c266495e0e9a5255b19aa15f 361 PANTHER PTHR11091 1 356 1.2E-257 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS13765 5ab91a46f2c36c455bf83094818dc848 233 Pfam PF06249 Ethanolamine utilisation protein EutQ 85 232 1.3E-68 T 22-04-2016 IPR010424 Ethanolamine utilisation EutQ UniPathway: UPA00560 APECO1_RS13765 5ab91a46f2c36c455bf83094818dc848 233 SUPERFAMILY SSF51182 109 230 7.56E-29 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS13765 5ab91a46f2c36c455bf83094818dc848 233 PANTHER PTHR36169 16 233 6.5E-63 T 22-04-2016 APECO1_RS13765 5ab91a46f2c36c455bf83094818dc848 233 Gene3D G3DSA:2.60.120.10 102 232 5.1E-49 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS00090 63cee6d4928baf2c9df96ac0fd339855 253 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 105 253 9.4E-11 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS00090 63cee6d4928baf2c9df96ac0fd339855 253 SUPERFAMILY SSF111364 30 253 5.1E-32 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 88 112 1.4E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 160 189 1.4E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 232 259 1.4E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 29 45 1.4E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 260 286 1.4E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 123 145 1.4E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 PRINTS PR00073 Coprogen oxidase signature 46 67 1.4E-90 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 Pfam PF01218 Coproporphyrinogen III oxidase 7 299 4.7E-134 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 SUPERFAMILY SSF102886 3 299 1.96E-139 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 59.476 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 PANTHER PTHR10755 7 299 3.7E-194 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 Gene3D G3DSA:3.40.1500.10 3 299 5.9E-139 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13690 aa29ab4cded2ed631aed99f1f2a2b899 299 PIRSF PIRSF000166 1 299 3.8E-130 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 SUPERFAMILY SSF52540 172 285 6.84E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 SUPERFAMILY SSF55729 370 418 1.3E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 SUPERFAMILY SSF55729 454 513 1.3E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 Gene3D G3DSA:3.40.50.300 169 281 1.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 Pfam PF08351 Domain of unknown function (DUF1726) 66 150 3.4E-7 T 22-04-2016 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 Pfam PF13718 GNAT acetyltransferase 2 369 483 1.5E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 PANTHER PTHR10925:SF6 14 603 0.0 T 22-04-2016 APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 Pfam PF17176 tRNA-binding domain 537 653 2.7E-36 T 22-04-2016 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 18 651 47.164 T 22-04-2016 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 PANTHER PTHR10925 14 603 0.0 T 22-04-2016 IPR032672 TmcA/NAT10/Kre33 GO:0008080 APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 Gene3D G3DSA:3.40.630.30 375 512 8.7E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS13845 e45c03c6a5cedcdd0046e636acc89be4 671 Pfam PF05127 Helicase 197 337 5.1E-41 T 22-04-2016 IPR007807 Helicase domain APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 PANTHER PTHR10799:SF774 128 223 3.3E-25 T 22-04-2016 APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 PANTHER PTHR10799:SF774 280 407 3.3E-25 T 22-04-2016 APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 SMART SM00267 237 407 9.0E-58 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 SUPERFAMILY SSF55073 253 401 5.1E-35 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 402 8.5E-45 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 404 1.0E-34 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 PANTHER PTHR10799 128 223 3.3E-25 T 22-04-2016 APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 PANTHER PTHR10799 280 407 3.3E-25 T 22-04-2016 APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 Pfam PF17152 Periplasmic sensor domain 44 144 3.6E-30 T 22-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 APECO1_RS14750 1d22d074325d458fbb0a811cc422041e 407 Gene3D G3DSA:3.30.70.270 250 404 2.4E-41 T 22-04-2016 APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 Gene3D G3DSA:1.10.10.10 3 43 1.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 9.7E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 SMART SM01134 73 234 1.5E-56 T 22-04-2016 APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 1.5E-45 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 PANTHER PTHR30363:SF8 2 252 4.4E-177 T 22-04-2016 APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 SUPERFAMILY SSF100950 74 236 7.22E-31 T 22-04-2016 APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 Gene3D G3DSA:3.40.50.1360 77 215 2.2E-9 T 22-04-2016 APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 SMART SM00420 8 57 7.0E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 PANTHER PTHR30363 2 252 4.4E-177 T 22-04-2016 APECO1_RS04080 8ee9773f9e113ce236aaaf69eec21e0d 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS20425 31628c3d23ca83934f7cb00e97c3062d 145 Pfam PF05360 yiaA/B two helix domain 75 127 2.1E-17 T 22-04-2016 IPR008024 YiaAB two helix APECO1_RS20425 31628c3d23ca83934f7cb00e97c3062d 145 Pfam PF05360 yiaA/B two helix domain 12 64 3.6E-21 T 22-04-2016 IPR008024 YiaAB two helix APECO1_RS20425 31628c3d23ca83934f7cb00e97c3062d 145 PANTHER PTHR37290:SF1 2 145 1.5E-86 T 22-04-2016 APECO1_RS20425 31628c3d23ca83934f7cb00e97c3062d 145 PANTHER PTHR37290 2 145 1.5E-86 T 22-04-2016 APECO1_RS03045 2580a29ab0383932419deb2a2bdb7ef8 67 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 67 27.925 T 22-04-2016 IPR024905 Sec-independent protein translocase protein TatE APECO1_RS03045 2580a29ab0383932419deb2a2bdb7ef8 67 Pfam PF02416 mttA/Hcf106 family 4 51 3.4E-12 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APECO1_RS03045 2580a29ab0383932419deb2a2bdb7ef8 67 PANTHER PTHR33162 1 52 6.2E-29 T 22-04-2016 APECO1_RS03045 2580a29ab0383932419deb2a2bdb7ef8 67 PANTHER PTHR33162:SF2 1 52 6.2E-29 T 22-04-2016 APECO1_RS03045 2580a29ab0383932419deb2a2bdb7ef8 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 47 2.0E-20 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APECO1_RS03045 2580a29ab0383932419deb2a2bdb7ef8 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 62 21.266 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APECO1_RS04140 d48fa010ac54350069b258ae5dacfefb 300 SUPERFAMILY SSF56059 98 288 9.16E-50 T 22-04-2016 APECO1_RS04140 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.40.50.20 8 102 2.4E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS04140 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.30.1490.20 103 173 5.9E-8 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS04140 d48fa010ac54350069b258ae5dacfefb 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 1.6E-83 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type APECO1_RS04140 d48fa010ac54350069b258ae5dacfefb 300 PANTHER PTHR21621 2 288 4.6E-123 T 22-04-2016 APECO1_RS04140 d48fa010ac54350069b258ae5dacfefb 300 Gene3D G3DSA:3.30.470.20 174 277 1.4E-36 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS04140 d48fa010ac54350069b258ae5dacfefb 300 PANTHER PTHR21621:SF0 2 288 4.6E-123 T 22-04-2016 APECO1_RS04140 d48fa010ac54350069b258ae5dacfefb 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 6.7E-98 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 APECO1_RS04140 d48fa010ac54350069b258ae5dacfefb 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 55.195 T 22-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 SUPERFAMILY SSF51735 4 167 3.63E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 22-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 Gene3D G3DSA:3.40.50.720 3 168 3.9E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 Gene3D G3DSA:3.90.110.10 170 439 7.2E-86 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 1.9E-77 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 PANTHER PTHR32092:SF5 2 443 2.1E-260 T 22-04-2016 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 6.536854E-52 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 6.536854E-52 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 6.536854E-52 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 6.536854E-52 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 6.536854E-52 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 6.536854E-52 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 6.536854E-52 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 2.4E-35 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 PANTHER PTHR32092 2 443 2.1E-260 T 22-04-2016 APECO1_RS09295 6862bfe004fb1363180bb6396d3bb5fc 450 SUPERFAMILY SSF56327 173 443 4.53E-79 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 2.1E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.1E-55 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Gene3D G3DSA:1.10.150.20 187 253 4.7E-25 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 1.1E-290 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 SMART SM00474 330 517 1.8E-49 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APECO1_RS22075 d79a256d77df555333185e520247108f 928 SMART SM00475 7 268 1.4E-145 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APECO1_RS22075 d79a256d77df555333185e520247108f 928 SUPERFAMILY SSF47807 171 291 6.13E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APECO1_RS22075 d79a256d77df555333185e520247108f 928 SUPERFAMILY SSF53098 326 518 4.46E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS22075 d79a256d77df555333185e520247108f 928 SMART SM00279 173 208 1.2E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Pfam PF01612 3'-5' exonuclease 330 517 1.8E-46 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PANTHER PTHR10133 6 288 0.0 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PANTHER PTHR10133 316 927 0.0 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 1.6E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 1.6E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 1.6E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 1.6E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 1.6E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 1.6E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 1.6E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 1.6E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 1.6E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 SMART SM00482 686 892 2.7E-128 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Gene3D G3DSA:3.30.420.10 329 542 1.1E-88 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS22075 d79a256d77df555333185e520247108f 928 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Gene3D G3DSA:3.40.50.1010 8 186 1.6E-73 T 22-04-2016 IPR029060 PIN domain-like APECO1_RS22075 d79a256d77df555333185e520247108f 928 PANTHER PTHR10133:SF27 6 288 0.0 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 PANTHER PTHR10133:SF27 316 927 0.0 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 SUPERFAMILY SSF88723 7 170 7.29E-57 T 22-04-2016 IPR029060 PIN domain-like APECO1_RS22075 d79a256d77df555333185e520247108f 928 Gene3D G3DSA:1.10.150.20 712 818 5.0E-37 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 SUPERFAMILY SSF56672 523 928 4.78E-165 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Gene3D G3DSA:3.30.70.370 819 928 7.6E-70 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Gene3D G3DSA:3.30.70.370 664 711 7.6E-70 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Gene3D G3DSA:1.20.1060.10 543 663 2.0E-37 T 22-04-2016 APECO1_RS22075 d79a256d77df555333185e520247108f 928 Pfam PF00476 DNA polymerase family A 551 925 2.8E-161 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS05400 200c454a7cd96049ad0a83a8f5a55d01 138 Gene3D G3DSA:1.20.58.300 1 112 3.3E-10 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 APECO1_RS05400 200c454a7cd96049ad0a83a8f5a55d01 138 Pfam PF05130 FlgN protein 1 128 5.5E-19 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 APECO1_RS05400 200c454a7cd96049ad0a83a8f5a55d01 138 SUPERFAMILY SSF140566 1 111 2.22E-16 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 APECO1_RS21745 69fab9bd5904773abc30706783c3647f 155 Gene3D G3DSA:3.10.129.10 18 154 1.2E-30 T 22-04-2016 IPR029069 HotDog domain APECO1_RS21745 69fab9bd5904773abc30706783c3647f 155 PANTHER PTHR12418:SF35 7 154 1.7E-90 T 22-04-2016 APECO1_RS21745 69fab9bd5904773abc30706783c3647f 155 SUPERFAMILY SSF54637 12 154 7.65E-26 T 22-04-2016 IPR029069 HotDog domain APECO1_RS21745 69fab9bd5904773abc30706783c3647f 155 Pfam PF03061 Thioesterase superfamily 57 145 4.5E-19 T 22-04-2016 IPR006683 Thioesterase domain APECO1_RS21745 69fab9bd5904773abc30706783c3647f 155 PANTHER PTHR12418 7 154 1.7E-90 T 22-04-2016 APECO1_RS21745 69fab9bd5904773abc30706783c3647f 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 153 5.2E-15 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 Pfam PF08279 HTH domain 7 63 1.7E-8 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 SUPERFAMILY SSF63520 191 294 2.75E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 Pfam PF00874 PRD domain 324 413 2.0E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 Pfam PF00874 PRD domain 209 294 5.8E-10 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 SUPERFAMILY SSF63520 314 417 5.36E-20 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 PANTHER PTHR30185:SF5 3 502 4.5E-87 T 22-04-2016 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 SUPERFAMILY SSF52794 421 501 8.89E-12 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 Gene3D G3DSA:3.40.50.270 421 503 2.0E-9 T 22-04-2016 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 Pfam PF05043 Mga helix-turn-helix domain 99 169 2.1E-6 T 22-04-2016 IPR007737 Mga helix-turn-helix domain APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 Gene3D G3DSA:1.10.10.10 92 153 8.7E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 Gene3D G3DSA:1.10.10.10 1 67 6.3E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 SUPERFAMILY SSF46785 2 48 2.57E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 Gene3D G3DSA:1.10.1790.10 199 294 5.4E-14 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 Gene3D G3DSA:1.10.1790.10 318 417 8.3E-21 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS20910 58866a6c0234492255d32f4144d957f9 517 PANTHER PTHR30185 3 502 4.5E-87 T 22-04-2016 APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 SMART SM00342 188 271 1.9E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 Pfam PF07883 Cupin domain 28 80 5.0E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 Gene3D G3DSA:2.60.120.10 25 99 5.4E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 Pfam PF12833 Helix-turn-helix domain 200 272 9.7E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 1.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 1.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 PANTHER PTHR11019 1 279 1.8E-179 T 22-04-2016 APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 Gene3D G3DSA:1.10.10.60 223 273 1.8E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 SUPERFAMILY SSF51182 24 160 3.65E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 PANTHER PTHR11019:SF120 1 279 1.8E-179 T 22-04-2016 APECO1_RS09300 9a959dce9d3a8a199f74bcfb33ec38e3 279 SUPERFAMILY SSF46689 224 274 4.93E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 Gene3D G3DSA:1.10.3860.10 3 416 1.5E-128 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PANTHER PTHR11958 1 437 4.2E-260 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 SUPERFAMILY SSF118215 8 412 2.48E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 3.9E-116 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PANTHER PTHR11958:SF26 1 437 4.2E-260 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 3.5E-52 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 3.5E-52 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 3.5E-52 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 3.5E-52 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.5E-52 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 3.5E-52 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 3.5E-52 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS23325 7e53e9c4e86a75dbc6b1d4e6bc84ecd4 437 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.5E-52 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 2228 2399 5.9E-49 T 22-04-2016 IPR008541 Protein of unknown function DUF823 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1943 2123 1.3E-48 T 22-04-2016 IPR008541 Protein of unknown function DUF823 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 2506 2657 7.0E-34 T 22-04-2016 IPR008541 Protein of unknown function DUF823 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1657 1839 1.1E-45 T 22-04-2016 IPR008541 Protein of unknown function DUF823 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1090 1274 1.1E-56 T 22-04-2016 IPR008541 Protein of unknown function DUF823 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 1373 1558 3.2E-49 T 22-04-2016 IPR008541 Protein of unknown function DUF823 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 539 712 7.1E-51 T 22-04-2016 IPR008541 Protein of unknown function DUF823 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 806 987 7.8E-48 T 22-04-2016 IPR008541 Protein of unknown function DUF823 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05689 Salmonella repeat of unknown function (DUF823) 272 444 1.2E-45 T 22-04-2016 IPR008541 Protein of unknown function DUF823 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 2426 2470 1.1E-15 T 22-04-2016 IPR008542 Protein of unknown function DUF824 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 203 248 7.9E-14 T 22-04-2016 IPR008542 Protein of unknown function DUF824 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1009 1051 1.5E-16 T 22-04-2016 IPR008542 Protein of unknown function DUF824 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 734 775 4.8E-13 T 22-04-2016 IPR008542 Protein of unknown function DUF824 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 2156 2194 6.4E-8 T 22-04-2016 IPR008542 Protein of unknown function DUF824 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1583 1628 4.6E-12 T 22-04-2016 IPR008542 Protein of unknown function DUF824 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1869 1908 2.4E-5 T 22-04-2016 IPR008542 Protein of unknown function DUF824 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 463 510 3.7E-9 T 22-04-2016 IPR008542 Protein of unknown function DUF824 APECO1_RS14235 2bbe00880f12744ca6c2bc1980b06f11 2683 Pfam PF05688 Salmonella repeat of unknown function (DUF824) 1300 1341 1.4E-12 T 22-04-2016 IPR008542 Protein of unknown function DUF824 APECO1_RS24915 93f0ef099b7dbabed6e81777cd036f7b 354 Gene3D G3DSA:3.30.1180.20 182 353 1.1E-62 T 22-04-2016 APECO1_RS24915 93f0ef099b7dbabed6e81777cd036f7b 354 PANTHER PTHR28629 259 353 6.6E-153 T 22-04-2016 APECO1_RS24915 93f0ef099b7dbabed6e81777cd036f7b 354 PANTHER PTHR28629 1 241 6.6E-153 T 22-04-2016 APECO1_RS24915 93f0ef099b7dbabed6e81777cd036f7b 354 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 350 9.4E-139 T 22-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 APECO1_RS24915 93f0ef099b7dbabed6e81777cd036f7b 354 Gene3D G3DSA:3.40.50.10440 11 180 5.5E-67 T 22-04-2016 APECO1_RS24915 93f0ef099b7dbabed6e81777cd036f7b 354 SUPERFAMILY SSF82549 11 353 1.23E-124 T 22-04-2016 APECO1_RS24915 93f0ef099b7dbabed6e81777cd036f7b 354 PANTHER PTHR28629:SF2 259 353 6.6E-153 T 22-04-2016 APECO1_RS24915 93f0ef099b7dbabed6e81777cd036f7b 354 PANTHER PTHR28629:SF2 1 241 6.6E-153 T 22-04-2016 APECO1_RS24915 93f0ef099b7dbabed6e81777cd036f7b 354 Pfam PF02733 Dak1 domain 17 349 1.0E-121 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 APECO1_RS15015 868fa57bc476028682a0b90c9b54864d 158 Gene3D G3DSA:1.10.530.10 2 156 1.2E-67 T 22-04-2016 APECO1_RS15015 868fa57bc476028682a0b90c9b54864d 158 SUPERFAMILY SSF53955 3 152 4.61E-54 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS15015 868fa57bc476028682a0b90c9b54864d 158 Pfam PF00959 Phage lysozyme 33 140 2.2E-23 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APECO1_RS03375 b0238bf5fcaf12fadb0ee1427fb2452a 225 Gene3D G3DSA:3.40.50.2300 3 122 5.5E-37 T 22-04-2016 APECO1_RS03375 b0238bf5fcaf12fadb0ee1427fb2452a 225 Gene3D G3DSA:1.10.10.10 126 224 6.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03375 b0238bf5fcaf12fadb0ee1427fb2452a 225 SMART SM00862 147 223 2.1E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS03375 b0238bf5fcaf12fadb0ee1427fb2452a 225 SMART SM00448 2 112 2.4E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS03375 b0238bf5fcaf12fadb0ee1427fb2452a 225 PANTHER PTHR26402 2 225 1.1E-115 T 22-04-2016 APECO1_RS03375 b0238bf5fcaf12fadb0ee1427fb2452a 225 Pfam PF00072 Response regulator receiver domain 4 112 2.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS03375 b0238bf5fcaf12fadb0ee1427fb2452a 225 SUPERFAMILY SSF52172 3 176 1.42E-39 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS03375 b0238bf5fcaf12fadb0ee1427fb2452a 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 6.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS03375 b0238bf5fcaf12fadb0ee1427fb2452a 225 PANTHER PTHR26402:SF399 2 225 1.1E-115 T 22-04-2016 APECO1_RS12075 c004b46ac0d958685cc3dfd0e52110c7 349 PANTHER PTHR30106:SF2 2 349 6.7E-160 T 22-04-2016 APECO1_RS12075 c004b46ac0d958685cc3dfd0e52110c7 349 PANTHER PTHR30106 2 349 6.7E-160 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APECO1_RS12075 c004b46ac0d958685cc3dfd0e52110c7 349 Pfam PF03601 Conserved hypothetical protein 698 18 326 1.3E-117 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APECO1_RS12075 c004b46ac0d958685cc3dfd0e52110c7 349 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 14 348 1.8E-171 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 APECO1_RS04715 c25c00def619f3688ec606862087bcab 261 SUPERFAMILY SSF53335 4 255 6.39E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04715 c25c00def619f3688ec606862087bcab 261 Pfam PF13847 Methyltransferase domain 45 151 1.7E-18 T 22-04-2016 IPR025714 Methyltransferase domain APECO1_RS04715 c25c00def619f3688ec606862087bcab 261 Gene3D G3DSA:3.40.50.150 5 243 1.5E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04715 c25c00def619f3688ec606862087bcab 261 PANTHER PTHR10108 1 215 1.6E-50 T 22-04-2016 APECO1_RS04715 c25c00def619f3688ec606862087bcab 261 PANTHER PTHR10108:SF919 1 215 1.6E-50 T 22-04-2016 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 SUPERFAMILY SSF53383 109 567 6.66E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 Gene3D G3DSA:3.40.640.10 109 418 5.8E-113 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 SUPERFAMILY SSF55904 571 718 1.44E-47 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 3.2E-200 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 PANTHER PTHR11751:SF425 110 580 1.4E-250 T 22-04-2016 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 SUPERFAMILY SSF52172 1 107 1.39E-36 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 22-04-2016 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.5E-48 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 Gene3D G3DSA:3.90.100.10 594 719 2.5E-39 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 Gene3D G3DSA:3.90.1150.10 421 593 5.3E-71 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 PIRSF PIRSF009393 1 719 1.6E-290 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 6.9E-25 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 Gene3D G3DSA:3.40.50.220 1 107 2.2E-39 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 APECO1_RS03365 56e2e3f2c0f42fd0a59063c3065ea996 732 PANTHER PTHR11751 110 580 1.4E-250 T 22-04-2016 APECO1_RS07870 a218a1819e81af6e7697deacefeca217 201 Pfam PF02525 Flavodoxin-like fold 3 195 1.7E-47 T 22-04-2016 IPR003680 Flavodoxin-like fold APECO1_RS07870 a218a1819e81af6e7697deacefeca217 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.818 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 APECO1_RS07870 a218a1819e81af6e7697deacefeca217 201 SUPERFAMILY SSF52218 1 199 9.72E-60 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS07870 a218a1819e81af6e7697deacefeca217 201 PANTHER PTHR10204:SF16 1 201 6.1E-118 T 22-04-2016 APECO1_RS07870 a218a1819e81af6e7697deacefeca217 201 Gene3D G3DSA:3.40.50.360 1 199 1.6E-68 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS07870 a218a1819e81af6e7697deacefeca217 201 PANTHER PTHR10204 1 201 6.1E-118 T 22-04-2016 APECO1_RS07500 aa0fd92338743d016eab570fd64e40aa 80 SUPERFAMILY SSF47413 3 52 7.78E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS07500 aa0fd92338743d016eab570fd64e40aa 80 Pfam PF01381 Helix-turn-helix 6 52 6.6E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS07500 aa0fd92338743d016eab570fd64e40aa 80 Gene3D G3DSA:1.10.260.40 2 67 5.6E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS07500 aa0fd92338743d016eab570fd64e40aa 80 SMART SM00530 3 58 4.1E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS06665 0c42847096bc99c1e1e53faab8635433 823 Gene3D G3DSA:3.30.420.10 643 814 8.7E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS06665 0c42847096bc99c1e1e53faab8635433 823 SUPERFAMILY SSF53098 642 816 3.39E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS06665 0c42847096bc99c1e1e53faab8635433 823 Pfam PF16473 3' exoribonuclease, RNase T-like 642 813 1.5E-53 T 22-04-2016 IPR033390 3'-5' exoribonuclease Rv2179c-like domain APECO1_RS13030 54f22814372f518b3e7bd70b82572134 257 SUPERFAMILY SSF51161 101 228 1.98E-29 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS13030 54f22814372f518b3e7bd70b82572134 257 PANTHER PTHR23416 96 229 1.8E-23 T 22-04-2016 APECO1_RS13030 54f22814372f518b3e7bd70b82572134 257 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 177 211 2.0E-5 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS13030 54f22814372f518b3e7bd70b82572134 257 PANTHER PTHR23416:SF52 96 229 1.8E-23 T 22-04-2016 APECO1_RS13030 54f22814372f518b3e7bd70b82572134 257 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 185 213 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS13030 54f22814372f518b3e7bd70b82572134 257 Gene3D G3DSA:2.160.10.10 98 230 1.5E-33 T 22-04-2016 APECO1_RS20445 3cbc160a899eba35c3baa2e4a7fec670 330 Gene3D G3DSA:3.40.50.2300 143 317 1.6E-46 T 22-04-2016 APECO1_RS20445 3cbc160a899eba35c3baa2e4a7fec670 330 Pfam PF13407 Periplasmic binding protein domain 38 286 6.2E-62 T 22-04-2016 IPR025997 Periplasmic binding protein APECO1_RS20445 3cbc160a899eba35c3baa2e4a7fec670 330 SUPERFAMILY SSF53822 24 318 2.19E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS20445 3cbc160a899eba35c3baa2e4a7fec670 330 Gene3D G3DSA:3.40.50.2300 25 142 1.8E-35 T 22-04-2016 APECO1_RS20445 3cbc160a899eba35c3baa2e4a7fec670 330 PANTHER PTHR30036 1 330 6.9E-177 T 22-04-2016 APECO1_RS20445 3cbc160a899eba35c3baa2e4a7fec670 330 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 1.4E-167 T 22-04-2016 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 APECO1_RS20445 3cbc160a899eba35c3baa2e4a7fec670 330 PANTHER PTHR30036:SF1 1 330 6.9E-177 T 22-04-2016 APECO1_RS25330 9686e7755560e8bad585264eed857787 71 PIRSF PIRSF030786 1 71 2.0E-42 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS25330 9686e7755560e8bad585264eed857787 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 3.5E-45 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS05035 71fda564349ddad227f5aca5ed160d5c 230 Gene3D G3DSA:1.10.10.10 129 227 2.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS05035 71fda564349ddad227f5aca5ed160d5c 230 PANTHER PTHR26402 3 230 1.9E-105 T 22-04-2016 APECO1_RS05035 71fda564349ddad227f5aca5ed160d5c 230 Pfam PF00072 Response regulator receiver domain 5 113 3.7E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS05035 71fda564349ddad227f5aca5ed160d5c 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 1.1E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS05035 71fda564349ddad227f5aca5ed160d5c 230 SMART SM00862 153 225 4.8E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS05035 71fda564349ddad227f5aca5ed160d5c 230 SUPERFAMILY SSF52172 3 190 2.28E-35 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS05035 71fda564349ddad227f5aca5ed160d5c 230 Gene3D G3DSA:3.40.50.2300 2 128 2.0E-33 T 22-04-2016 APECO1_RS05035 71fda564349ddad227f5aca5ed160d5c 230 PANTHER PTHR26402:SF596 3 230 1.9E-105 T 22-04-2016 APECO1_RS05035 71fda564349ddad227f5aca5ed160d5c 230 SMART SM00448 3 113 1.2E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 SUPERFAMILY SSF63520 61 167 4.45E-29 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 ProSitePatterns PS00654 PRD domain signature. 99 111 - T 22-04-2016 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 SMART SM01061 3 61 9.8E-28 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 Pfam PF00874 PRD domain 182 273 3.8E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 Pfam PF00874 PRD domain 78 164 5.5E-25 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 Gene3D G3DSA:2.30.24.10 3 56 1.0E-23 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 SUPERFAMILY SSF50151 3 55 8.89E-17 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 SUPERFAMILY SSF63520 173 275 2.22E-24 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 PANTHER PTHR30185:SF2 1 277 2.9E-140 T 22-04-2016 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 PANTHER PTHR30185 1 277 2.9E-140 T 22-04-2016 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 Gene3D G3DSA:1.10.1790.10 67 165 3.9E-30 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 Gene3D G3DSA:1.10.1790.10 170 277 4.8E-29 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS21255 6d6429c8fe36b03a775e6e1c66f0afae 278 Pfam PF03123 CAT RNA binding domain 3 56 1.7E-22 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APECO1_RS09425 6279db7ce8fd804de1b94206c664b020 135 PANTHER PTHR22769 1 133 3.9E-40 T 22-04-2016 APECO1_RS09425 6279db7ce8fd804de1b94206c664b020 135 PRINTS PR00502 NUDIX hydrolase family signature 32 46 6.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS09425 6279db7ce8fd804de1b94206c664b020 135 PRINTS PR00502 NUDIX hydrolase family signature 46 61 6.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS09425 6279db7ce8fd804de1b94206c664b020 135 Pfam PF00293 NUDIX domain 5 125 1.5E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS09425 6279db7ce8fd804de1b94206c664b020 135 PANTHER PTHR22769:SF35 1 133 3.9E-40 T 22-04-2016 APECO1_RS09425 6279db7ce8fd804de1b94206c664b020 135 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS09425 6279db7ce8fd804de1b94206c664b020 135 Gene3D G3DSA:3.90.79.10 3 127 1.5E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS09425 6279db7ce8fd804de1b94206c664b020 135 SUPERFAMILY SSF55811 1 125 5.82E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 2.1E-49 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 349 360 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 SUPERFAMILY SSF140490 333 429 4.84E-32 T 22-04-2016 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 PANTHER PTHR11780 5 425 3.3E-224 T 22-04-2016 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 2.8E-26 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 SMART SM00928 336 381 4.3E-22 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 SUPERFAMILY SSF142019 16 246 1.7E-85 T 22-04-2016 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 423 2.6E-205 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 SUPERFAMILY SSF142984 248 330 1.44E-20 T 22-04-2016 APECO1_RS12700 9f88ce040ca01c86b202bd2031636d4e 445 Pfam PF10531 SLBB domain 253 295 1.5E-6 T 22-04-2016 IPR019554 Soluble ligand binding domain APECO1_RS08380 8426f1acd99881bb9deff94864232822 396 Gene3D G3DSA:1.20.1250.20 8 195 3.2E-27 T 22-04-2016 APECO1_RS08380 8426f1acd99881bb9deff94864232822 396 SUPERFAMILY SSF103473 5 386 1.03E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS08380 8426f1acd99881bb9deff94864232822 396 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.96 T 22-04-2016 IPR023495 Sugar efflux transporter, putative APECO1_RS08380 8426f1acd99881bb9deff94864232822 396 Pfam PF07690 Major Facilitator Superfamily 19 348 8.4E-33 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS08380 8426f1acd99881bb9deff94864232822 396 PANTHER PTHR23501 1 396 3.1E-267 T 22-04-2016 APECO1_RS08380 8426f1acd99881bb9deff94864232822 396 PANTHER PTHR23501:SF89 1 396 3.1E-267 T 22-04-2016 APECO1_RS08380 8426f1acd99881bb9deff94864232822 396 Gene3D G3DSA:1.20.1250.20 207 387 2.1E-12 T 22-04-2016 APECO1_RS14560 b152b24a8899546dec1b23b6a8b431d3 245 PANTHER PTHR18895:SF73 34 235 5.2E-95 T 22-04-2016 APECO1_RS14560 b152b24a8899546dec1b23b6a8b431d3 245 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 11 245 56.139 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 APECO1_RS14560 b152b24a8899546dec1b23b6a8b431d3 245 Pfam PF05175 Methyltransferase small domain 46 130 6.0E-13 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APECO1_RS14560 b152b24a8899546dec1b23b6a8b431d3 245 SUPERFAMILY SSF53335 15 170 2.04E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS14560 b152b24a8899546dec1b23b6a8b431d3 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS14560 b152b24a8899546dec1b23b6a8b431d3 245 Gene3D G3DSA:3.40.50.150 32 238 1.4E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS14560 b152b24a8899546dec1b23b6a8b431d3 245 PANTHER PTHR18895 34 235 5.2E-95 T 22-04-2016 APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 Pfam PF00128 Alpha amylase, catalytic domain 185 269 4.2E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 PANTHER PTHR10357 1 630 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 657 75.92 T 22-04-2016 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 UniPathway: UPA00165 APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 629 4.7E-268 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 97 2.4E-20 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 PANTHER PTHR10357:SF152 1 630 0.0 T 22-04-2016 APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 SUPERFAMILY SSF51445 130 463 1.15E-125 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 SUPERFAMILY SSF51445 492 564 1.15E-125 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 SUPERFAMILY SSF81296 7 144 8.6E-47 T 22-04-2016 IPR014756 Immunoglobulin E-set APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 Gene3D G3DSA:3.20.20.80 149 566 1.7E-106 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 Gene3D G3DSA:2.60.40.10 7 148 2.4E-54 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS19655 b47d4af59f27705f1275cb58a4b2c7ec 657 SMART SM00642 130 558 4.4E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS05440 d5bb5ca9c52fff494b56f4dc20ba61ee 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 9.5E-49 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APECO1_RS05440 d5bb5ca9c52fff494b56f4dc20ba61ee 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 2.4E-29 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APECO1_RS05440 d5bb5ca9c52fff494b56f4dc20ba61ee 260 SUPERFAMILY SSF117143 93 222 9.94E-35 T 22-04-2016 APECO1_RS05440 d5bb5ca9c52fff494b56f4dc20ba61ee 260 PANTHER PTHR30435:SF19 1 260 4.3E-139 T 22-04-2016 APECO1_RS05440 d5bb5ca9c52fff494b56f4dc20ba61ee 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 4.5E-117 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 APECO1_RS05440 d5bb5ca9c52fff494b56f4dc20ba61ee 260 PANTHER PTHR30435 1 260 4.3E-139 T 22-04-2016 APECO1_RS05440 d5bb5ca9c52fff494b56f4dc20ba61ee 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 1.2E-26 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APECO1_RS05440 d5bb5ca9c52fff494b56f4dc20ba61ee 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APECO1_RS05440 d5bb5ca9c52fff494b56f4dc20ba61ee 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.6E-14 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APECO1_RS27600 910d82fe8d0ed31f054df9b1886ad531 93 Pfam PF08335 GlnD PII-uridylyltransferase 5 92 4.2E-25 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APECO1_RS27600 910d82fe8d0ed31f054df9b1886ad531 93 SUPERFAMILY SSF81593 7 84 7.14E-9 T 22-04-2016 APECO1_RS22510 f0c047f511107497352c18dbea859382 205 PIRSF PIRSF011444 1 205 3.9E-96 T 22-04-2016 IPR009706 Protein of unknown function DUF1287 APECO1_RS22510 f0c047f511107497352c18dbea859382 205 Pfam PF06940 Domain of unknown function (DUF1287) 41 202 3.0E-70 T 22-04-2016 IPR009706 Protein of unknown function DUF1287 APECO1_RS22510 f0c047f511107497352c18dbea859382 205 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 31 202 1.0E-98 T 22-04-2016 IPR009706 Protein of unknown function DUF1287 APECO1_RS23430 f9b6e85d349ed1cc060ac2bfe314c4f4 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 146 4.9E-63 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APECO1_RS23430 f9b6e85d349ed1cc060ac2bfe314c4f4 149 PANTHER PTHR30345 1 147 9.1E-77 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APECO1_RS23430 f9b6e85d349ed1cc060ac2bfe314c4f4 149 Gene3D G3DSA:3.40.1400.10 2 148 9.5E-62 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APECO1_RS23430 f9b6e85d349ed1cc060ac2bfe314c4f4 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 145 3.7E-76 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 APECO1_RS23430 f9b6e85d349ed1cc060ac2bfe314c4f4 149 SUPERFAMILY SSF89623 2 145 6.67E-57 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APECO1_RS23430 f9b6e85d349ed1cc060ac2bfe314c4f4 149 Pfam PF02502 Ribose/Galactose Isomerase 4 141 2.9E-53 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APECO1_RS23430 f9b6e85d349ed1cc060ac2bfe314c4f4 149 PIRSF PIRSF005384 2 148 4.6E-60 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APECO1_RS19870 7d0363d814441a19f137f27395180c6e 208 Pfam PF07947 YhhN-like protein 26 206 4.0E-42 T 22-04-2016 IPR012506 YhhN-like GO:0016021 APECO1_RS20605 3b71aebc857797f6b97324e944b78985 69 Gene3D G3DSA:1.20.58.250 15 63 3.0E-10 T 22-04-2016 IPR011326 Homologue of theta DNA polymerase III APECO1_RS09685 3ecc229e111a2dda5f13f13566d72467 59 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 6.8E-29 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 APECO1_RS09685 3ecc229e111a2dda5f13f13566d72467 59 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 2.0E-20 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 APECO1_RS09685 3ecc229e111a2dda5f13f13566d72467 59 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.866 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 26.303 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 SMART SM00487 195 391 3.2E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 SUPERFAMILY SSF52540 214 440 1.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 SUPERFAMILY SSF52540 503 601 1.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 Gene3D G3DSA:3.40.50.300 198 380 7.8E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 SMART SM00490 492 589 5.3E-10 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 Gene3D G3DSA:3.40.50.300 456 632 1.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 4.4E-220 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 Pfam PF00271 Helicase conserved C-terminal domain 521 589 1.4E-5 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 Pfam PF00270 DEAD/DEAH box helicase 203 362 6.2E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS22440 30b2a6fe41b075aad95e7c309963f0dc 732 PANTHER PTHR30580 1 732 2.0E-293 T 22-04-2016 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 Gene3D G3DSA:1.10.1050.10 1 101 2.9E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 SMART SM01390 3 95 1.3E-49 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.44 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 SUPERFAMILY SSF55174 3 206 1.96E-73 T 22-04-2016 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.4E-87 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 Gene3D G3DSA:3.10.290.10 102 190 1.8E-33 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.0E-30 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 Pfam PF01479 S4 domain 97 143 7.1E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 PANTHER PTHR11831 1 206 2.9E-96 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 SMART SM00363 96 160 8.2E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS18950 21ff7290df0255854c7a7e36a8c2ec66 206 PANTHER PTHR11831:SF4 1 206 2.9E-96 T 22-04-2016 APECO1_RS00050 399d90227132f252720a0249ce69397b 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 7.0E-28 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS00050 399d90227132f252720a0249ce69397b 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 2.2E-40 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS00050 399d90227132f252720a0249ce69397b 195 Gene3D G3DSA:3.40.980.10 2 188 5.3E-54 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS00050 399d90227132f252720a0249ce69397b 195 SMART SM00852 7 153 1.0E-22 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS00050 399d90227132f252720a0249ce69397b 195 SUPERFAMILY SSF53218 3 188 3.66E-49 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS00050 399d90227132f252720a0249ce69397b 195 PANTHER PTHR10192 1 192 4.9E-93 T 22-04-2016 APECO1_RS00050 399d90227132f252720a0249ce69397b 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APECO1_RS18895 17a646b6a2fc49e23813abddf9e5ecf9 374 Gene3D G3DSA:3.40.50.450 110 252 5.2E-9 T 22-04-2016 APECO1_RS18895 17a646b6a2fc49e23813abddf9e5ecf9 374 PANTHER PTHR32039 60 374 2.4E-126 T 22-04-2016 APECO1_RS18895 17a646b6a2fc49e23813abddf9e5ecf9 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 64 283 2.8E-88 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APECO1_RS18895 17a646b6a2fc49e23813abddf9e5ecf9 374 Pfam PF02481 DNA recombination-mediator protein A 67 274 1.1E-70 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APECO1_RS18895 17a646b6a2fc49e23813abddf9e5ecf9 374 SUPERFAMILY SSF102405 78 283 3.36E-40 T 22-04-2016 APECO1_RS18895 17a646b6a2fc49e23813abddf9e5ecf9 374 PANTHER PTHR32039:SF8 60 374 2.4E-126 T 22-04-2016 APECO1_RS06130 4840fbdc33a998bbf270c50edd80d11c 403 PANTHER PTHR33121 1 397 3.7E-239 T 22-04-2016 APECO1_RS06130 4840fbdc33a998bbf270c50edd80d11c 403 PANTHER PTHR33121:SF15 1 397 3.7E-239 T 22-04-2016 APECO1_RS06130 4840fbdc33a998bbf270c50edd80d11c 403 Pfam PF00563 EAL domain 171 388 4.9E-48 T 22-04-2016 IPR001633 EAL domain APECO1_RS06130 4840fbdc33a998bbf270c50edd80d11c 403 Pfam PF04940 Sensors of blue-light using FAD 2 92 4.1E-24 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 APECO1_RS06130 4840fbdc33a998bbf270c50edd80d11c 403 SMART SM00052 145 394 9.2E-56 T 22-04-2016 IPR001633 EAL domain APECO1_RS06130 4840fbdc33a998bbf270c50edd80d11c 403 SUPERFAMILY SSF54975 1 132 4.25E-36 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS06130 4840fbdc33a998bbf270c50edd80d11c 403 Gene3D G3DSA:3.20.20.450 174 389 6.9E-40 T 22-04-2016 IPR001633 EAL domain APECO1_RS06130 4840fbdc33a998bbf270c50edd80d11c 403 SMART SM01034 2 94 1.5E-38 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 APECO1_RS06130 4840fbdc33a998bbf270c50edd80d11c 403 SUPERFAMILY SSF141868 173 389 1.83E-42 T 22-04-2016 IPR001633 EAL domain APECO1_RS24345 aa7e9378acc372795492f11cc4ea8059 91 PANTHER PTHR34156:SF4 2 90 8.4E-67 T 22-04-2016 APECO1_RS24345 aa7e9378acc372795492f11cc4ea8059 91 PANTHER PTHR34156 2 90 8.4E-67 T 22-04-2016 APECO1_RS24345 aa7e9378acc372795492f11cc4ea8059 91 SUPERFAMILY SSF159871 11 90 1.44E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS24345 aa7e9378acc372795492f11cc4ea8059 91 Gene3D G3DSA:3.30.1660.10 33 90 2.4E-15 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS24345 aa7e9378acc372795492f11cc4ea8059 91 Pfam PF07338 Protein of unknown function (DUF1471) 35 90 1.8E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS06435 d63d61068f94d5289d7c8b5c6079f26a 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 50.268 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APECO1_RS06435 d63d61068f94d5289d7c8b5c6079f26a 284 SUPERFAMILY SSF51569 3 278 1.1E-103 T 22-04-2016 APECO1_RS06435 d63d61068f94d5289d7c8b5c6079f26a 284 Pfam PF00793 DAHP synthetase I family 10 274 2.0E-68 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APECO1_RS06435 d63d61068f94d5289d7c8b5c6079f26a 284 PANTHER PTHR21057:SF6 1 284 9.9E-232 T 22-04-2016 APECO1_RS06435 d63d61068f94d5289d7c8b5c6079f26a 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.0E-118 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APECO1_RS06435 d63d61068f94d5289d7c8b5c6079f26a 284 Gene3D G3DSA:3.20.20.70 18 281 1.1E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS06435 d63d61068f94d5289d7c8b5c6079f26a 284 PANTHER PTHR21057 1 284 9.9E-232 T 22-04-2016 APECO1_RS14890 2fefdb59a6c068cdbfc6de3602dbf8f7 352 Pfam PF04865 Baseplate J-like protein 69 317 1.6E-58 T 22-04-2016 IPR006949 Baseplate protein J-like APECO1_RS14890 2fefdb59a6c068cdbfc6de3602dbf8f7 352 PANTHER PTHR37829 5 351 4.5E-122 T 22-04-2016 APECO1_RS06360 9e0d6f57d3493272cd65ad70725b36e9 356 Gene3D G3DSA:3.30.1180.20 185 355 5.1E-69 T 22-04-2016 APECO1_RS06360 9e0d6f57d3493272cd65ad70725b36e9 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 352 6.8E-157 T 22-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 APECO1_RS06360 9e0d6f57d3493272cd65ad70725b36e9 356 SUPERFAMILY SSF82549 10 355 5.49E-127 T 22-04-2016 APECO1_RS06360 9e0d6f57d3493272cd65ad70725b36e9 356 PANTHER PTHR28629 261 356 2.1E-171 T 22-04-2016 APECO1_RS06360 9e0d6f57d3493272cd65ad70725b36e9 356 PANTHER PTHR28629 1 243 2.1E-171 T 22-04-2016 APECO1_RS06360 9e0d6f57d3493272cd65ad70725b36e9 356 Gene3D G3DSA:3.40.50.10440 12 182 4.1E-69 T 22-04-2016 APECO1_RS06360 9e0d6f57d3493272cd65ad70725b36e9 356 Pfam PF02733 Dak1 domain 18 351 2.1E-127 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 APECO1_RS06360 9e0d6f57d3493272cd65ad70725b36e9 356 PANTHER PTHR28629:SF2 261 356 2.1E-171 T 22-04-2016 APECO1_RS06360 9e0d6f57d3493272cd65ad70725b36e9 356 PANTHER PTHR28629:SF2 1 243 2.1E-171 T 22-04-2016 APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 7.1E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.9E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 PANTHER PTHR11544:SF53 1 69 1.1E-48 T 22-04-2016 APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 67 2.7E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 PANTHER PTHR11544 1 69 1.1E-48 T 22-04-2016 APECO1_RS09755 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site APECO1_RS12800 9c56481195c0a84887bc132b90327655 120 Gene3D G3DSA:3.30.1130.10 3 120 3.3E-37 T 22-04-2016 APECO1_RS12800 9c56481195c0a84887bc132b90327655 120 SMART SM00905 8 118 2.0E-33 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS12800 9c56481195c0a84887bc132b90327655 120 Pfam PF02152 Dihydroneopterin aldolase 8 116 2.1E-25 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS12800 9c56481195c0a84887bc132b90327655 120 PANTHER PTHR20941:SF6 1 120 3.0E-78 T 22-04-2016 APECO1_RS12800 9c56481195c0a84887bc132b90327655 120 PANTHER PTHR20941 1 120 3.0E-78 T 22-04-2016 APECO1_RS12800 9c56481195c0a84887bc132b90327655 120 SUPERFAMILY SSF55620 6 120 1.67E-31 T 22-04-2016 APECO1_RS12800 9c56481195c0a84887bc132b90327655 120 TIGRFAM TIGR00526 folB_dom: FolB domain 6 120 1.5E-39 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APECO1_RS16150 13fbc3e9b854bf501eabd10aef88724f 107 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS16150 13fbc3e9b854bf501eabd10aef88724f 107 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 33 104 7.4E-24 T 22-04-2016 IPR022204 Prepilin peptidase dependent protein C APECO1_RS16150 13fbc3e9b854bf501eabd10aef88724f 107 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 7.4E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS16150 13fbc3e9b854bf501eabd10aef88724f 107 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 30 1.8E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS06155 1c5ecb2f85a98884d4850c35210d23c9 283 PANTHER PTHR33121:SF8 1 273 1.2E-164 T 22-04-2016 APECO1_RS06155 1c5ecb2f85a98884d4850c35210d23c9 283 Gene3D G3DSA:3.20.20.450 27 272 3.2E-76 T 22-04-2016 IPR001633 EAL domain APECO1_RS06155 1c5ecb2f85a98884d4850c35210d23c9 283 SUPERFAMILY SSF141868 27 275 3.53E-76 T 22-04-2016 IPR001633 EAL domain APECO1_RS06155 1c5ecb2f85a98884d4850c35210d23c9 283 Pfam PF00563 EAL domain 27 262 3.1E-64 T 22-04-2016 IPR001633 EAL domain APECO1_RS06155 1c5ecb2f85a98884d4850c35210d23c9 283 SMART SM00052 21 267 1.7E-113 T 22-04-2016 IPR001633 EAL domain APECO1_RS06155 1c5ecb2f85a98884d4850c35210d23c9 283 PANTHER PTHR33121 1 273 1.2E-164 T 22-04-2016 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 PANTHER PTHR11735:SF6 1 336 7.9E-172 T 22-04-2016 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 Gene3D G3DSA:3.30.420.40 1 159 5.9E-51 T 22-04-2016 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 Pfam PF00814 Glycoprotease family 24 307 3.0E-103 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.1E-136 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.3E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.3E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.3E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.3E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.3E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.3E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.78 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 SUPERFAMILY SSF53067 1 309 6.61E-45 T 22-04-2016 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 2.1E-130 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APECO1_RS17830 e05a479c3938d5a71cd885fb481e3ec4 337 PANTHER PTHR11735 1 336 7.9E-172 T 22-04-2016 APECO1_RS16725 7ad30a2f9c07ad0dff873afcdc2e3d07 188 PANTHER PTHR33219:SF5 1 186 4.6E-98 T 22-04-2016 APECO1_RS16725 7ad30a2f9c07ad0dff873afcdc2e3d07 188 Pfam PF02325 YGGT family 10 78 8.1E-22 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 APECO1_RS16725 7ad30a2f9c07ad0dff873afcdc2e3d07 188 Pfam PF02325 YGGT family 104 167 7.7E-16 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 APECO1_RS16725 7ad30a2f9c07ad0dff873afcdc2e3d07 188 PANTHER PTHR33219 1 186 4.6E-98 T 22-04-2016 APECO1_RS14850 234d13ea67f5326575e8a00e1e3a188e 45 SUPERFAMILY SSF54857 1 45 8.24E-9 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APECO1_RS14850 234d13ea67f5326575e8a00e1e3a188e 45 Gene3D G3DSA:3.30.910.10 1 45 3.5E-10 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APECO1_RS14850 234d13ea67f5326575e8a00e1e3a188e 45 Pfam PF06183 DinI-like family 2 42 4.3E-7 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APECO1_RS02055 492a3f5a9e1b76a8e5c0b23594a21fe3 193 PANTHER PTHR38764 2 193 4.7E-91 T 22-04-2016 APECO1_RS02055 492a3f5a9e1b76a8e5c0b23594a21fe3 193 PIRSF PIRSF011489 1 193 5.4E-86 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 APECO1_RS02055 492a3f5a9e1b76a8e5c0b23594a21fe3 193 PANTHER PTHR38764:SF1 2 193 4.7E-91 T 22-04-2016 APECO1_RS02055 492a3f5a9e1b76a8e5c0b23594a21fe3 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 56.675 T 22-04-2016 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 APECO1_RS02055 492a3f5a9e1b76a8e5c0b23594a21fe3 193 Pfam PF04336 Protein of unknown function, DUF479 81 185 8.5E-29 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 APECO1_RS09005 45b221a7f65fe18aefeef1bec5704c51 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 7.9E-25 T 22-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 APECO1_RS09005 45b221a7f65fe18aefeef1bec5704c51 78 SUPERFAMILY SSF58042 24 74 2.49E-23 T 22-04-2016 APECO1_RS09005 45b221a7f65fe18aefeef1bec5704c51 78 Gene3D G3DSA:1.20.5.190 22 73 4.9E-25 T 22-04-2016 APECO1_RS09005 45b221a7f65fe18aefeef1bec5704c51 78 PIRSF PIRSF002855 1 78 1.3E-28 T 22-04-2016 IPR016367 Murein-lipoprotein APECO1_RS09005 45b221a7f65fe18aefeef1bec5704c51 78 PANTHER PTHR38763 1 78 2.8E-29 T 22-04-2016 APECO1_RS19880 5a422db384aafff6e9de57f0759b81fb 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain APECO1_RS19880 5a422db384aafff6e9de57f0759b81fb 81 Pfam PF01206 Sulfurtransferase TusA 10 79 2.1E-25 T 22-04-2016 IPR001455 TusA-like domain APECO1_RS19880 5a422db384aafff6e9de57f0759b81fb 81 SUPERFAMILY SSF64307 5 80 9.03E-28 T 22-04-2016 IPR001455 TusA-like domain APECO1_RS19880 5a422db384aafff6e9de57f0759b81fb 81 PANTHER PTHR33279 7 80 1.4E-48 T 22-04-2016 APECO1_RS19880 5a422db384aafff6e9de57f0759b81fb 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.938 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 APECO1_RS19880 5a422db384aafff6e9de57f0759b81fb 81 Gene3D G3DSA:3.30.110.40 6 80 7.2E-32 T 22-04-2016 IPR001455 TusA-like domain APECO1_RS19880 5a422db384aafff6e9de57f0759b81fb 81 PANTHER PTHR33279:SF5 7 80 1.4E-48 T 22-04-2016 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 Gene3D G3DSA:3.40.50.880 600 753 3.6E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 SUPERFAMILY SSF52317 599 749 5.72E-15 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 PRINTS PR00067 Catalase signature 94 117 2.9E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 PRINTS PR00067 Catalase signature 178 195 2.9E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 PRINTS PR00067 Catalase signature 366 393 2.9E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 PRINTS PR00067 Catalase signature 398 424 2.9E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 PRINTS PR00067 Catalase signature 157 175 2.9E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 PRINTS PR00067 Catalase signature 197 215 2.9E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 PANTHER PTHR11465:SF7 60 634 0.0 T 22-04-2016 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 PIRSF PIRSF038927 42 751 0.0 T 22-04-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 Pfam PF06628 Catalase-related immune-responsive 499 562 3.1E-17 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 Gene3D G3DSA:2.40.180.10 59 436 1.5E-180 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 411 419 - T 22-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 SUPERFAMILY SSF56634 47 584 1.44E-226 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 SMART SM01060 81 469 6.7E-275 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 ProSitePatterns PS00438 Catalase proximal active site signature. 117 133 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 PANTHER PTHR11465 60 634 0.0 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS09285 4141be1533ba5b902e6b789ff7f83fb8 753 Pfam PF00199 Catalase 81 466 1.0E-176 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 Gene3D G3DSA:3.40.50.720 2 112 1.1E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 PANTHER PTHR10996:SF111 1 330 2.6E-192 T 22-04-2016 APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 8.2E-28 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 SUPERFAMILY SSF52283 4 110 1.47E-18 T 22-04-2016 APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 Gene3D G3DSA:3.40.50.720 113 259 2.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 256 2.5E-32 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.922 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 PANTHER PTHR10996 1 330 2.6E-192 T 22-04-2016 APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 281 4.6E-18 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 SUPERFAMILY SSF51735 91 257 9.17E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APECO1_RS12885 046aaa081d3fc8dda5e71334e5b50e42 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 SUPERFAMILY SSF102114 6 444 2.75E-148 T 22-04-2016 APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 Gene3D G3DSA:1.10.10.10 407 441 7.8E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 SMART SM00729 52 272 1.3E-58 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 Gene3D G3DSA:3.80.30.20 53 283 1.2E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 PIRSF PIRSF000167 3 454 3.1E-182 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 Pfam PF04055 Radical SAM superfamily 57 226 5.0E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 PANTHER PTHR13932:SF6 1 451 2.9E-278 T 22-04-2016 APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 Pfam PF06969 HemN C-terminal domain 363 431 4.0E-8 T 22-04-2016 IPR010723 HemN, C-terminal APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 PANTHER PTHR13932 1 451 2.9E-278 T 22-04-2016 APECO1_RS22090 626ce06e5782c5a112063f41a7a96964 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 6.4E-243 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 Pfam PF01472 PUA domain 276 350 1.4E-22 T 22-04-2016 IPR002478 PUA domain GO:0003723 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 2.9E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 2.9E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 2.9E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 2.9E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 2.9E-57 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 Gene3D G3DSA:2.30.130.10 273 365 1.9E-26 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 Gene3D G3DSA:3.40.1160.10 3 260 1.3E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 SUPERFAMILY SSF88697 276 365 1.1E-23 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 Pfam PF00696 Amino acid kinase family 6 234 1.7E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 PIRSF PIRSF000729 1 367 2.7E-147 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 36.214 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 SMART SM00359 276 359 7.2E-23 T 22-04-2016 IPR002478 PUA domain GO:0003723 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 5.4E-157 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 PANTHER PTHR11063 3 367 1.9E-146 T 22-04-2016 APECO1_RS01375 13119f177bb40251c69d693b6a942708 367 SUPERFAMILY SSF53633 6 256 1.13E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 PANTHER PTHR11751:SF292 9 78 9.4E-48 T 22-04-2016 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 PANTHER PTHR11751:SF292 125 148 9.4E-48 T 22-04-2016 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 Pfam PF07702 UTRA domain 96 233 1.4E-31 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 SUPERFAMILY SSF46785 8 79 2.13E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 8.7E-105 T 22-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 SMART SM00866 96 236 3.0E-25 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 PANTHER PTHR11751 9 78 9.4E-48 T 22-04-2016 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 PANTHER PTHR11751 125 148 9.4E-48 T 22-04-2016 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 Gene3D G3DSA:1.10.10.10 8 82 1.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 9.0E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 Gene3D G3DSA:3.40.1410.10 83 241 1.5E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.94E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.94E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 SUPERFAMILY SSF64288 63 240 1.41E-37 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS23490 d6aaba153e2e5da188b31dc6b21f6541 241 SMART SM00345 17 75 1.6E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS13740 d99aa5544abc64d9ad64820482ee315c 467 PANTHER PTHR11699:SF68 1 467 2.5E-210 T 22-04-2016 APECO1_RS13740 d99aa5544abc64d9ad64820482ee315c 467 Gene3D G3DSA:3.40.309.10 250 424 1.3E-25 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS13740 d99aa5544abc64d9ad64820482ee315c 467 Gene3D G3DSA:3.40.605.10 35 249 4.1E-24 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS13740 d99aa5544abc64d9ad64820482ee315c 467 SUPERFAMILY SSF53720 34 458 3.8E-62 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS13740 d99aa5544abc64d9ad64820482ee315c 467 PIRSF PIRSF036410 1 467 1.1E-213 T 22-04-2016 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related UniPathway: UPA00560 APECO1_RS13740 d99aa5544abc64d9ad64820482ee315c 467 Pfam PF00171 Aldehyde dehydrogenase family 34 421 1.6E-30 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS13740 d99aa5544abc64d9ad64820482ee315c 467 PANTHER PTHR11699 1 467 2.5E-210 T 22-04-2016 APECO1_RS23280 ebc96f78bd219e2312b969eda49400c1 104 Pfam PF04341 Protein of unknown function, DUF485 11 98 7.3E-33 T 22-04-2016 IPR007436 Protein of unknown function DUF485 APECO1_RS23280 ebc96f78bd219e2312b969eda49400c1 104 PANTHER PTHR38598 2 104 3.4E-51 T 22-04-2016 APECO1_RS07965 4bc0697d5803640b95ff9679eceaaaf0 390 Pfam PF03594 Benzoate membrane transport protein 6 381 1.0E-154 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 APECO1_RS07965 4bc0697d5803640b95ff9679eceaaaf0 390 TIGRFAM TIGR00843 benE: benzoate transporter 1 382 2.7E-209 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 APECO1_RS07965 4bc0697d5803640b95ff9679eceaaaf0 390 PANTHER PTHR30199:SF0 1 390 5.8E-182 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 APECO1_RS07965 4bc0697d5803640b95ff9679eceaaaf0 390 PANTHER PTHR30199 1 390 5.8E-182 T 22-04-2016 APECO1_RS23090 1c6df200f11ed98ffe1c14281172482b 171 Pfam PF01475 Ferric uptake regulator family 20 138 4.1E-15 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APECO1_RS23090 1c6df200f11ed98ffe1c14281172482b 171 PANTHER PTHR33202 1 171 1.6E-97 T 22-04-2016 APECO1_RS23090 1c6df200f11ed98ffe1c14281172482b 171 PANTHER PTHR33202:SF6 1 171 1.6E-97 T 22-04-2016 APECO1_RS23090 1c6df200f11ed98ffe1c14281172482b 171 Gene3D G3DSA:1.10.10.10 12 83 4.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS23090 1c6df200f11ed98ffe1c14281172482b 171 SUPERFAMILY SSF46785 12 144 8.75E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS06035 bf57e4bcaa17d87b8c79cfdf62d4c2c6 853 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 472 813 2.6E-127 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS06035 bf57e4bcaa17d87b8c79cfdf62d4c2c6 853 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 627 701 1.1E-20 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS06035 bf57e4bcaa17d87b8c79cfdf62d4c2c6 853 Pfam PF06791 Prophage tail length tape measure protein 54 256 8.3E-66 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 PANTHER PTHR11113 9 374 2.7E-127 T 22-04-2016 APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 SUPERFAMILY SSF51556 51 346 1.29E-95 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 PIRSF PIRSF038994 1 376 7.3E-115 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 Pfam PF01979 Amidohydrolase family 47 373 7.9E-17 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 Gene3D G3DSA:3.20.20.140 59 326 1.7E-101 T 22-04-2016 APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 Gene3D G3DSA:2.30.40.10 327 373 3.6E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 SUPERFAMILY SSF51338 346 374 8.64E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 SUPERFAMILY SSF51338 2 49 8.64E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 372 1.2E-86 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APECO1_RS18140 2284dbb8fa9f162b7f1c46ff1e8474b5 377 Gene3D G3DSA:2.30.40.10 3 58 1.7E-4 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 Gene3D G3DSA:3.90.180.10 7 146 9.5E-44 T 22-04-2016 IPR011032 GroES-like APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 PANTHER PTHR11695 16 327 2.8E-132 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 SUPERFAMILY SSF51735 113 275 1.87E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 SMART SM00829 11 325 1.9E-27 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 PANTHER PTHR11695:SF605 16 327 2.8E-132 T 22-04-2016 APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 Pfam PF00107 Zinc-binding dehydrogenase 152 258 3.8E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.8E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 Gene3D G3DSA:3.40.50.720 147 256 1.1E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 APECO1_RS23105 b4927ecfebf36e79364d11804ff9ed83 327 SUPERFAMILY SSF50129 6 144 1.73E-33 T 22-04-2016 IPR011032 GroES-like APECO1_RS25400 aee35e1d670adaa5ece3842f97ee8ad0 107 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 105 1.3E-27 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 APECO1_RS25400 aee35e1d670adaa5ece3842f97ee8ad0 107 PIRSF PIRSF030771 1 107 4.9E-62 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 Gene3D G3DSA:3.20.20.210 387 751 6.3E-136 T 22-04-2016 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 PANTHER PTHR30519 1 752 0.0 T 22-04-2016 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 SUPERFAMILY SSF51726 5 389 1.83E-114 T 22-04-2016 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 PIRSF PIRSF000382 2 753 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.575 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 Gene3D G3DSA:3.20.20.210 5 384 2.6E-151 T 22-04-2016 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 SUPERFAMILY SSF51726 391 751 1.57E-120 T 22-04-2016 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 749 1.6E-163 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 6.2E-126 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APECO1_RS21790 661d9ed7c22b01cafa6130f51cb8b528 753 PANTHER PTHR30519:SF0 1 752 0.0 T 22-04-2016 APECO1_RS14325 e249c94755ee9bb00025226e77bb78bc 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 92 1.6E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS14325 e249c94755ee9bb00025226e77bb78bc 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 2.9E-63 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 APECO1_RS14325 e249c94755ee9bb00025226e77bb78bc 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 APECO1_RS14325 e249c94755ee9bb00025226e77bb78bc 111 PANTHER PTHR23426 7 110 9.1E-45 T 22-04-2016 APECO1_RS14325 e249c94755ee9bb00025226e77bb78bc 111 SUPERFAMILY SSF54292 4 109 1.66E-35 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APECO1_RS14325 e249c94755ee9bb00025226e77bb78bc 111 PRINTS PR00355 Adrenodoxin signature 60 74 1.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APECO1_RS14325 e249c94755ee9bb00025226e77bb78bc 111 PRINTS PR00355 Adrenodoxin signature 83 91 1.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APECO1_RS14325 e249c94755ee9bb00025226e77bb78bc 111 PRINTS PR00355 Adrenodoxin signature 42 52 1.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APECO1_RS14325 e249c94755ee9bb00025226e77bb78bc 111 Gene3D G3DSA:3.10.20.30 5 108 1.4E-36 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS15230 3b7210881cac89d5c3102e8dbea03b9c 136 SUPERFAMILY SSF52218 2 131 8.38E-24 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15230 3b7210881cac89d5c3102e8dbea03b9c 136 Gene3D G3DSA:3.40.50.360 4 132 1.3E-58 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS15230 3b7210881cac89d5c3102e8dbea03b9c 136 Pfam PF07972 NrdI Flavodoxin like 5 122 2.9E-48 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI APECO1_RS15230 3b7210881cac89d5c3102e8dbea03b9c 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 1.0E-62 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI APECO1_RS15230 3b7210881cac89d5c3102e8dbea03b9c 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 36.982 T 22-04-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial APECO1_RS15230 3b7210881cac89d5c3102e8dbea03b9c 136 PANTHER PTHR37297 2 135 5.7E-54 T 22-04-2016 APECO1_RS15230 3b7210881cac89d5c3102e8dbea03b9c 136 PIRSF PIRSF005087 1 136 1.5E-55 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI APECO1_RS15230 3b7210881cac89d5c3102e8dbea03b9c 136 PANTHER PTHR37297:SF1 2 135 5.7E-54 T 22-04-2016 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 9.8E-142 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 Gene3D G3DSA:3.65.10.10 238 422 1.0E-73 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.943 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 SUPERFAMILY SSF55205 1 423 7.46E-147 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 PANTHER PTHR21090 1 424 2.4E-217 T 22-04-2016 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 1.4E-155 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 PIRSF PIRSF000505 1 427 5.2E-158 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS04650 68218659212d38ee59449eaff3fef13e 427 Gene3D G3DSA:3.65.10.10 22 237 1.9E-67 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APECO1_RS09290 31fb8b5b80c2a931cfddc1bfe30255fd 252 SUPERFAMILY SSF88713 1 252 1.69E-72 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APECO1_RS09290 31fb8b5b80c2a931cfddc1bfe30255fd 252 Gene3D G3DSA:3.20.20.370 1 252 6.0E-80 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS09290 31fb8b5b80c2a931cfddc1bfe30255fd 252 PANTHER PTHR31609 1 252 5.8E-94 T 22-04-2016 APECO1_RS09290 31fb8b5b80c2a931cfddc1bfe30255fd 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 249 40.52 T 22-04-2016 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 APECO1_RS09290 31fb8b5b80c2a931cfddc1bfe30255fd 252 Pfam PF04794 YdjC-like protein 5 240 1.6E-58 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like APECO1_RS00735 1b83fe5578e95d34fd10346d6a7ecba4 421 Gene3D G3DSA:2.60.40.1090 258 421 1.5E-26 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS00735 1b83fe5578e95d34fd10346d6a7ecba4 421 Pfam PF00419 Fimbrial protein 260 420 3.8E-13 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS00735 1b83fe5578e95d34fd10346d6a7ecba4 421 SUPERFAMILY SSF49401 273 421 2.09E-17 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS00735 1b83fe5578e95d34fd10346d6a7ecba4 421 PIRSF PIRSF033053 1 421 1.8E-184 T 22-04-2016 IPR017014 Fimbrial-like protein YadC APECO1_RS12680 dadb23aca088493e208ad39c45dda147 184 PANTHER PTHR33269:SF2 1 183 2.0E-115 T 22-04-2016 APECO1_RS12680 dadb23aca088493e208ad39c45dda147 184 PANTHER PTHR33269 1 183 2.0E-115 T 22-04-2016 APECO1_RS12680 dadb23aca088493e208ad39c45dda147 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 157 3.0E-33 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 Gene3D G3DSA:3.30.70.20 44 96 2.7E-11 T 22-04-2016 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 Pfam PF04055 Radical SAM superfamily 27 232 1.8E-24 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 PANTHER PTHR30352 7 60 1.3E-138 T 22-04-2016 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 PANTHER PTHR30352 93 281 1.3E-138 T 22-04-2016 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 SUPERFAMILY SSF54862 12 117 3.49E-13 T 22-04-2016 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 Gene3D G3DSA:3.80.30.10 113 281 3.5E-45 T 22-04-2016 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 5 282 3.2E-120 T 22-04-2016 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 Pfam PF13353 4Fe-4S single cluster domain 17 169 3.4E-9 T 22-04-2016 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 SUPERFAMILY SSF102114 85 277 1.18E-14 T 22-04-2016 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 PANTHER PTHR30352:SF13 7 60 1.3E-138 T 22-04-2016 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 PANTHER PTHR30352:SF13 93 281 1.3E-138 T 22-04-2016 APECO1_RS25535 37e9182158ebd56a29404a45a11960c5 287 PIRSF PIRSF000371 1 287 4.1E-96 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APECO1_RS24185 a1bfec7d50018f0a78f4e722018a36a4 500 PIRSF PIRSF006060 1 499 5.5E-65 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS24185 a1bfec7d50018f0a78f4e722018a36a4 500 Pfam PF13520 Amino acid permease 9 468 7.2E-28 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS24185 a1bfec7d50018f0a78f4e722018a36a4 500 PANTHER PTHR11785:SF322 6 476 2.8E-129 T 22-04-2016 APECO1_RS24185 a1bfec7d50018f0a78f4e722018a36a4 500 PANTHER PTHR11785 6 476 2.8E-129 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS17080 3474b938a51432df8a80a808b9234455 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 2.7E-37 T 22-04-2016 IPR009329 Protein of unknown function DUF987 APECO1_RS17080 3474b938a51432df8a80a808b9234455 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 3.0E-33 T 22-04-2016 IPR009329 Protein of unknown function DUF987 APECO1_RS11140 3474b938a51432df8a80a808b9234455 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 2.7E-37 T 22-04-2016 IPR009329 Protein of unknown function DUF987 APECO1_RS11140 3474b938a51432df8a80a808b9234455 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 3.0E-33 T 22-04-2016 IPR009329 Protein of unknown function DUF987 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 243 5.8E-29 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 Hamap MF_01535 Rhamnulokinase [rhaB]. 6 483 54.423 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 PANTHER PTHR10196 1 477 1.7E-242 T 22-04-2016 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 460 2.9E-243 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 SUPERFAMILY SSF53067 252 472 2.59E-31 T 22-04-2016 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 Gene3D G3DSA:3.30.420.40 6 242 2.7E-29 T 22-04-2016 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 439 7.3E-26 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 SUPERFAMILY SSF53067 7 245 6.47E-49 T 22-04-2016 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 Gene3D G3DSA:3.30.420.40 363 470 7.8E-15 T 22-04-2016 APECO1_RS22275 6ad8977da4865ad67da07f4ffd29c8cb 489 PANTHER PTHR10196:SF6 1 477 1.7E-242 T 22-04-2016 APECO1_RS19020 88dcf3c63abf6783733af222cd11271c 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 4.5E-60 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 APECO1_RS19020 88dcf3c63abf6783733af222cd11271c 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site APECO1_RS19020 88dcf3c63abf6783733af222cd11271c 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.078 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APECO1_RS19020 88dcf3c63abf6783733af222cd11271c 123 SMART SM01374 1 123 3.7E-86 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APECO1_RS19020 88dcf3c63abf6783733af222cd11271c 123 SUPERFAMILY SSF50193 2 122 2.35E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APECO1_RS19020 88dcf3c63abf6783733af222cd11271c 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 8.5E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APECO1_RS19020 88dcf3c63abf6783733af222cd11271c 123 PANTHER PTHR11761 1 123 5.1E-78 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APECO1_RS19020 88dcf3c63abf6783733af222cd11271c 123 Gene3D G3DSA:2.40.150.20 1 123 5.2E-56 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APECO1_RS11730 6f2079491e7106e3a3af52ace5764040 150 SUPERFAMILY SSF55804 6 143 5.62E-27 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS11730 6f2079491e7106e3a3af52ace5764040 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 136 6.1E-22 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS11730 6f2079491e7106e3a3af52ace5764040 150 Gene3D G3DSA:3.40.930.10 9 134 2.2E-31 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS11730 6f2079491e7106e3a3af52ace5764040 150 PANTHER PTHR30505:SF4 1 150 7.1E-105 T 22-04-2016 APECO1_RS11730 6f2079491e7106e3a3af52ace5764040 150 PANTHER PTHR30505 1 150 7.1E-105 T 22-04-2016 APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 4.7E-166 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 SUPERFAMILY SSF52540 7 219 1.07E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 PANTHER PTHR24220:SF284 1 335 4.3E-122 T 22-04-2016 APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 Pfam PF00005 ABC transporter 17 156 2.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 SUPERFAMILY SSF50331 234 350 7.23E-22 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 Gene3D G3DSA:3.40.50.300 17 218 2.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 SMART SM00382 23 206 4.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 288 351 9.0E-24 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 Pfam PF03459 TOBE domain 290 350 1.8E-17 T 22-04-2016 IPR005116 Transport-associated OB, type 1 APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 Gene3D G3DSA:2.40.50.100 277 348 1.4E-22 T 22-04-2016 APECO1_RS03700 ca712f63ad99da199866a33afbfebdac 352 PANTHER PTHR24220 1 335 4.3E-122 T 22-04-2016 APECO1_RS25530 dc3abdf0a86efd8a9c037e766889b7c2 259 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APECO1_RS25530 dc3abdf0a86efd8a9c037e766889b7c2 259 Gene3D G3DSA:3.20.20.140 4 258 1.6E-80 T 22-04-2016 APECO1_RS25530 dc3abdf0a86efd8a9c037e766889b7c2 259 PANTHER PTHR10060 4 259 9.1E-91 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS25530 dc3abdf0a86efd8a9c037e766889b7c2 259 PIRSF PIRSF005902 2 259 5.1E-74 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS25530 dc3abdf0a86efd8a9c037e766889b7c2 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APECO1_RS25530 dc3abdf0a86efd8a9c037e766889b7c2 259 Pfam PF01026 TatD related DNase 6 257 2.2E-68 T 22-04-2016 IPR001130 TatD family GO:0016788 APECO1_RS25530 dc3abdf0a86efd8a9c037e766889b7c2 259 SUPERFAMILY SSF51556 5 258 9.2E-79 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS25530 dc3abdf0a86efd8a9c037e766889b7c2 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APECO1_RS21890 2a3e392a44441822af1a0aeb0ee09260 496 PANTHER PTHR35342 5 496 1.9E-198 T 22-04-2016 APECO1_RS21890 2a3e392a44441822af1a0aeb0ee09260 496 PANTHER PTHR35342:SF4 5 496 1.9E-198 T 22-04-2016 APECO1_RS21890 2a3e392a44441822af1a0aeb0ee09260 496 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 439 1.1E-140 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane APECO1_RS17440 ea52332cb2bb7fff6c16aee08c7f9baf 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 5.0E-81 T 22-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria APECO1_RS17440 ea52332cb2bb7fff6c16aee08c7f9baf 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 92.813 T 22-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 APECO1_RS17440 ea52332cb2bb7fff6c16aee08c7f9baf 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 1.3E-35 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 APECO1_RS17440 ea52332cb2bb7fff6c16aee08c7f9baf 164 PANTHER PTHR38596:SF1 1 164 2.7E-101 T 22-04-2016 APECO1_RS17440 ea52332cb2bb7fff6c16aee08c7f9baf 164 PANTHER PTHR38596 1 164 2.7E-101 T 22-04-2016 APECO1_RS19140 c65a5d13c8f7cd40b44f0de114c819fe 387 Pfam PF12693 GspL periplasmic domain 240 384 2.1E-41 T 22-04-2016 IPR025691 GspL periplasmic domain APECO1_RS19140 c65a5d13c8f7cd40b44f0de114c819fe 387 SUPERFAMILY SSF53067 5 143 4.53E-24 T 22-04-2016 APECO1_RS19140 c65a5d13c8f7cd40b44f0de114c819fe 387 Pfam PF05134 Type II secretion system (T2SS), protein L 6 232 3.3E-68 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain APECO1_RS19140 c65a5d13c8f7cd40b44f0de114c819fe 387 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 6 384 3.8E-110 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 APECO1_RS12105 13fc148e87df389b2985375e6baf187e 312 PANTHER PTHR10584 10 224 5.2E-89 T 22-04-2016 APECO1_RS12105 13fc148e87df389b2985375e6baf187e 312 PANTHER PTHR10584:SF1 10 224 5.2E-89 T 22-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 APECO1_RS12105 13fc148e87df389b2985375e6baf187e 312 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 15 309 43.455 T 22-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 APECO1_RS12105 13fc148e87df389b2985375e6baf187e 312 SUPERFAMILY SSF110581 9 308 3.27E-116 T 22-04-2016 APECO1_RS12105 13fc148e87df389b2985375e6baf187e 312 Pfam PF04227 Indigoidine synthase A like protein 16 306 1.9E-130 T 22-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 APECO1_RS14495 f043a217724589dd5ee675ce3a6abd86 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 5.9E-41 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS14495 f043a217724589dd5ee675ce3a6abd86 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 5.3E-24 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS14495 f043a217724589dd5ee675ce3a6abd86 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 23 87 9.0E-33 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS14495 f043a217724589dd5ee675ce3a6abd86 126 SUPERFAMILY SSF56214 3 125 1.29E-29 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS14495 f043a217724589dd5ee675ce3a6abd86 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.669 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS14495 f043a217724589dd5ee675ce3a6abd86 126 Gene3D G3DSA:3.90.470.20 1 125 1.1E-41 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS14495 f043a217724589dd5ee675ce3a6abd86 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 4.2E-61 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 SUPERFAMILY SSF52540 147 376 4.22E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 Gene3D G3DSA:3.40.50.2300 7 131 2.2E-30 T 22-04-2016 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 Pfam PF00158 Sigma-54 interaction domain 147 313 3.8E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 Pfam PF02954 Bacterial regulatory protein, Fis family 400 439 8.3E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 SMART SM00448 8 119 6.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 3.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 3.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 Gene3D G3DSA:3.40.50.300 147 319 6.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 Gene3D G3DSA:1.10.8.60 320 377 5.4E-18 T 22-04-2016 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 SUPERFAMILY SSF46689 360 441 5.38E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 PANTHER PTHR32071:SF11 1 452 1.8E-213 T 22-04-2016 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 Gene3D G3DSA:1.10.10.60 388 441 3.0E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 SUPERFAMILY SSF52172 7 192 7.54E-40 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 Pfam PF00072 Response regulator receiver domain 10 119 1.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 SMART SM00382 167 310 6.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23195 aaa0ecb8181765470464fd703cebcdca 452 PANTHER PTHR32071 1 452 1.8E-213 T 22-04-2016 APECO1_RS02460 dedb27605d4aa148b71a616fe071186c 264 PANTHER PTHR40590 1 264 3.2E-121 T 22-04-2016 APECO1_RS02460 dedb27605d4aa148b71a616fe071186c 264 Pfam PF01963 TraB family 30 264 3.6E-41 T 22-04-2016 IPR002816 Pheromone shutdown, TraB APECO1_RS12610 fee40d4ca185e3eaf50add88f5e77e13 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 8.5E-79 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APECO1_RS12610 fee40d4ca185e3eaf50add88f5e77e13 285 Gene3D G3DSA:1.10.12.10 223 273 2.3E-30 T 22-04-2016 IPR014748 Crontonase, C-terminal APECO1_RS12610 fee40d4ca185e3eaf50add88f5e77e13 285 PANTHER PTHR11941 9 278 1.3E-199 T 22-04-2016 APECO1_RS12610 fee40d4ca185e3eaf50add88f5e77e13 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.586 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12610 fee40d4ca185e3eaf50add88f5e77e13 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APECO1_RS12610 fee40d4ca185e3eaf50add88f5e77e13 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 7.6E-152 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12610 fee40d4ca185e3eaf50add88f5e77e13 285 SUPERFAMILY SSF52096 16 280 7.54E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS12610 fee40d4ca185e3eaf50add88f5e77e13 285 Gene3D G3DSA:3.90.226.10 22 222 1.7E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS12610 fee40d4ca185e3eaf50add88f5e77e13 285 PANTHER PTHR11941:SF20 9 278 1.3E-199 T 22-04-2016 APECO1_RS21125 a2f356f07b79e5af56b8049959c5897c 132 Pfam PF06078 Bacterial protein of unknown function (DUF937) 10 107 3.9E-11 T 22-04-2016 IPR009282 Protein of unknown function DUF937 APECO1_RS21125 a2f356f07b79e5af56b8049959c5897c 132 SUPERFAMILY SSF140804 3 130 5.49E-34 T 22-04-2016 IPR027405 YidB-like APECO1_RS21125 a2f356f07b79e5af56b8049959c5897c 132 Gene3D G3DSA:1.10.10.690 1 131 4.8E-46 T 22-04-2016 IPR027405 YidB-like APECO1_RS11290 04a7301938974ca9ef8b32fd4a5e16e4 319 Pfam PF00535 Glycosyl transferase family 2 5 140 2.6E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS11290 04a7301938974ca9ef8b32fd4a5e16e4 319 Gene3D G3DSA:3.90.550.10 2 229 1.6E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11290 04a7301938974ca9ef8b32fd4a5e16e4 319 PANTHER PTHR22916 1 219 6.2E-25 T 22-04-2016 APECO1_RS11290 04a7301938974ca9ef8b32fd4a5e16e4 319 SUPERFAMILY SSF53448 3 225 1.37E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS27275 21536b474e6888a7e940909b00b425b6 146 Gene3D G3DSA:3.40.50.970 1 108 5.1E-30 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS27275 21536b474e6888a7e940909b00b425b6 146 Gene3D G3DSA:3.40.50.970 112 145 2.2E-4 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS27275 21536b474e6888a7e940909b00b425b6 146 PANTHER PTHR11624 2 89 3.7E-48 T 22-04-2016 IPR033247 Transketolase family APECO1_RS27275 21536b474e6888a7e940909b00b425b6 146 PANTHER PTHR11624 111 146 3.7E-48 T 22-04-2016 IPR033247 Transketolase family APECO1_RS27275 21536b474e6888a7e940909b00b425b6 146 PANTHER PTHR11624:SF67 2 89 3.7E-48 T 22-04-2016 APECO1_RS27275 21536b474e6888a7e940909b00b425b6 146 PANTHER PTHR11624:SF67 111 146 3.7E-48 T 22-04-2016 APECO1_RS27275 21536b474e6888a7e940909b00b425b6 146 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 2 66 6.0E-5 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APECO1_RS27275 21536b474e6888a7e940909b00b425b6 146 SUPERFAMILY SSF52518 2 108 7.66E-26 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APECO1_RS20060 ba567efc37a122d5441c11d83799896e 176 SUPERFAMILY SSF46894 97 170 3.06E-10 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS20060 ba567efc37a122d5441c11d83799896e 176 Pfam PF00196 Bacterial regulatory proteins, luxR family 115 168 8.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS20060 ba567efc37a122d5441c11d83799896e 176 SMART SM00421 113 170 2.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS20060 ba567efc37a122d5441c11d83799896e 176 Gene3D G3DSA:1.10.10.10 115 168 3.3E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25620 209ab2b375d36ccfd02e55f0146093fc 108 Pfam PF01371 Trp repressor protein 17 102 3.2E-28 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 APECO1_RS25620 209ab2b375d36ccfd02e55f0146093fc 108 TIGRFAM TIGR01321 TrpR: trp operon repressor 11 103 1.2E-42 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APECO1_RS25620 209ab2b375d36ccfd02e55f0146093fc 108 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 1.0E-40 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APECO1_RS25620 209ab2b375d36ccfd02e55f0146093fc 108 Gene3D G3DSA:1.10.1270.10 10 107 1.8E-46 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 APECO1_RS25620 209ab2b375d36ccfd02e55f0146093fc 108 PANTHER PTHR38025:SF1 1 108 7.0E-46 T 22-04-2016 APECO1_RS25620 209ab2b375d36ccfd02e55f0146093fc 108 SUPERFAMILY SSF48295 5 105 9.42E-30 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APECO1_RS25620 209ab2b375d36ccfd02e55f0146093fc 108 PIRSF PIRSF003196 3 108 2.1E-40 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APECO1_RS25620 209ab2b375d36ccfd02e55f0146093fc 108 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 24.062 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APECO1_RS25620 209ab2b375d36ccfd02e55f0146093fc 108 PANTHER PTHR38025 1 108 7.0E-46 T 22-04-2016 APECO1_RS07240 9b875f158a8efa9d47cded8a23df00bd 73 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 71 8.7E-36 T 22-04-2016 IPR014321 Phage shock protein, PspD APECO1_RS07240 9b875f158a8efa9d47cded8a23df00bd 73 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 71 7.2E-32 T 22-04-2016 IPR014321 Phage shock protein, PspD APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 SUPERFAMILY SSF51161 2 262 7.54E-81 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 3.7E-8 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 5.0E-9 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 4.0E-113 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 PANTHER PTHR23416 1 254 2.8E-144 T 22-04-2016 APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 49.046 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 PIRSF PIRSF000456 5 262 1.5E-107 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 Gene3D G3DSA:1.20.1180.10 197 262 6.1E-28 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 Gene3D G3DSA:2.160.10.10 4 194 5.4E-51 T 22-04-2016 APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 PANTHER PTHR23416:SF8 1 254 2.8E-144 T 22-04-2016 APECO1_RS00955 e410512694c5bfde8a02684be2b1b62a 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 3.5E-29 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 Gene3D G3DSA:3.40.50.1000 179 264 1.0E-47 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 Gene3D G3DSA:3.40.50.1000 1 74 1.0E-47 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 PANTHER PTHR10000 1 265 1.5E-209 T 22-04-2016 APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.4E-52 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 1.2E-65 T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 232 3.8E-21 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 PANTHER PTHR10000:SF22 1 265 1.5E-209 T 22-04-2016 APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 Gene3D G3DSA:3.30.1240.10 84 178 1.6E-33 T 22-04-2016 APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 SUPERFAMILY SSF56784 1 263 6.96E-63 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS03990 73c179d3722b69269b7fdd91be86bccd 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 22-04-2016 APECO1_RS09070 b46ced53e13575ed67d3fb8bd80beebc 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 78 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS09070 b46ced53e13575ed67d3fb8bd80beebc 404 Gene3D G3DSA:1.20.1250.20 11 188 1.8E-20 T 22-04-2016 APECO1_RS09070 b46ced53e13575ed67d3fb8bd80beebc 404 Gene3D G3DSA:1.20.1250.20 211 398 1.5E-14 T 22-04-2016 APECO1_RS09070 b46ced53e13575ed67d3fb8bd80beebc 404 PANTHER PTHR23514:SF1 2 401 4.6E-235 T 22-04-2016 APECO1_RS09070 b46ced53e13575ed67d3fb8bd80beebc 404 SUPERFAMILY SSF103473 6 397 2.22E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS09070 b46ced53e13575ed67d3fb8bd80beebc 404 Pfam PF07690 Major Facilitator Superfamily 13 289 3.5E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS09070 b46ced53e13575ed67d3fb8bd80beebc 404 PANTHER PTHR23514 2 401 4.6E-235 T 22-04-2016 APECO1_RS13170 35e6e9d1247b4f58359a1b84baca7dc1 172 Pfam PF06530 Phage antitermination protein Q 19 99 3.0E-9 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 PANTHER PTHR11963:SF13 7 503 3.8E-272 T 22-04-2016 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 6.7E-120 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.561 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.4E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 Gene3D G3DSA:3.40.220.10 1 161 1.5E-66 T 22-04-2016 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 SUPERFAMILY SSF53187 180 496 5.65E-126 T 22-04-2016 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 SUPERFAMILY SSF52949 1 184 5.89E-52 T 22-04-2016 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 Gene3D G3DSA:3.40.630.10 171 496 1.6E-139 T 22-04-2016 APECO1_RS24725 265d817054fc93eac46c9c4d888ed0e2 503 PANTHER PTHR11963 7 503 3.8E-272 T 22-04-2016 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 284 310 2.27E-111 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 68 97 2.27E-111 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 145 163 2.27E-111 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 315 334 2.27E-111 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 260 281 2.27E-111 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 346 366 2.27E-111 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 103 125 2.27E-111 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PRINTS PR00174 LacY proton/sugar symporter family signature 214 242 2.27E-111 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PANTHER PTHR23522 1 417 2.0E-124 T 22-04-2016 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 Pfam PF01306 LacY proton/sugar symporter 2 412 1.3E-205 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 6 401 6.1E-209 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 PANTHER PTHR23522:SF3 1 417 2.0E-124 T 22-04-2016 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 SUPERFAMILY SSF103473 6 401 1.22E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 Gene3D G3DSA:1.20.1250.20 4 189 1.4E-38 T 22-04-2016 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 Gene3D G3DSA:1.20.1250.20 209 408 2.9E-44 T 22-04-2016 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 280 294 - T 22-04-2016 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 APECO1_RS01820 49f5aab847431e5b9d173eb0199e3347 417 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 64 78 - T 22-04-2016 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 APECO1_RS24390 7a36c49d1dda6052aba7e34bbf4d54e6 284 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 281 3.3E-155 T 22-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 APECO1_RS24390 7a36c49d1dda6052aba7e34bbf4d54e6 284 Hamap MF_01951 L-ribulose-5-phosphate 3-epimerase UlaE [ulaE]. 1 284 82.292 T 22-04-2016 IPR023492 L-ribulose-5-phosphate 3-epimerase, Enterobacteriaceae GO:0034015 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 APECO1_RS24390 7a36c49d1dda6052aba7e34bbf4d54e6 284 Pfam PF01261 Xylose isomerase-like TIM barrel 25 230 4.2E-33 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24390 7a36c49d1dda6052aba7e34bbf4d54e6 284 Gene3D G3DSA:3.20.20.150 4 273 2.1E-49 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24390 7a36c49d1dda6052aba7e34bbf4d54e6 284 SUPERFAMILY SSF51658 21 275 3.67E-55 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24390 7a36c49d1dda6052aba7e34bbf4d54e6 284 PANTHER PTHR12110:SF20 1 282 2.5E-242 T 22-04-2016 APECO1_RS24390 7a36c49d1dda6052aba7e34bbf4d54e6 284 PANTHER PTHR12110 1 282 2.5E-242 T 22-04-2016 APECO1_RS05655 cf4ce44d7aa824e40a4fdea554937226 262 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 41 152 2.7E-6 T 22-04-2016 IPR007621 TPM domain APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 Gene3D G3DSA:3.90.79.10 2 143 3.1E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 PANTHER PTHR22769 1 145 4.8E-67 T 22-04-2016 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 SUPERFAMILY SSF55811 3 141 3.52E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.0E-55 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 1.0E-55 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 1.0E-55 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 1.0E-55 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 1.0E-55 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 PANTHER PTHR22769:SF28 1 145 4.8E-67 T 22-04-2016 APECO1_RS09990 7fb3e1c98af22f3620ecd0103acab0c5 147 Pfam PF00293 NUDIX domain 5 141 5.6E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS09750 437a0f7cc15ea9d4c062e89a2135c437 269 PIRSF PIRSF018249 1 268 2.6E-92 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 APECO1_RS09750 437a0f7cc15ea9d4c062e89a2135c437 269 PANTHER PTHR10108:SF886 18 198 6.0E-49 T 22-04-2016 APECO1_RS09750 437a0f7cc15ea9d4c062e89a2135c437 269 Gene3D G3DSA:3.40.50.150 73 206 2.0E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS09750 437a0f7cc15ea9d4c062e89a2135c437 269 PANTHER PTHR10108 18 198 6.0E-49 T 22-04-2016 APECO1_RS09750 437a0f7cc15ea9d4c062e89a2135c437 269 Pfam PF13847 Methyltransferase domain 84 219 4.4E-15 T 22-04-2016 IPR025714 Methyltransferase domain APECO1_RS09750 437a0f7cc15ea9d4c062e89a2135c437 269 SUPERFAMILY SSF53335 4 250 1.23E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS18445 e7b335ee1a6eca37cc7ce70d47aeab74 191 PANTHER PTHR37481 1 188 3.4E-72 T 22-04-2016 APECO1_RS18445 e7b335ee1a6eca37cc7ce70d47aeab74 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 8.6E-53 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APECO1_RS18445 e7b335ee1a6eca37cc7ce70d47aeab74 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.9E-54 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related APECO1_RS18445 e7b335ee1a6eca37cc7ce70d47aeab74 191 PIRSF PIRSF028513 1 186 2.8E-41 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APECO1_RS18445 e7b335ee1a6eca37cc7ce70d47aeab74 191 PANTHER PTHR37481:SF1 1 188 3.4E-72 T 22-04-2016 APECO1_RS18445 e7b335ee1a6eca37cc7ce70d47aeab74 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 185 27.913 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APECO1_RS16310 95a7d87de41454cfa296c42a101e96e3 398 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 392 1.4E-196 T 22-04-2016 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 APECO1_RS16310 95a7d87de41454cfa296c42a101e96e3 398 SUPERFAMILY SSF53686 34 354 1.31E-61 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS16310 95a7d87de41454cfa296c42a101e96e3 398 PANTHER PTHR10314:SF127 106 392 1.1E-178 T 22-04-2016 APECO1_RS16310 95a7d87de41454cfa296c42a101e96e3 398 PANTHER PTHR10314:SF127 8 90 1.1E-178 T 22-04-2016 APECO1_RS16310 95a7d87de41454cfa296c42a101e96e3 398 PANTHER PTHR10314 106 392 1.1E-178 T 22-04-2016 APECO1_RS16310 95a7d87de41454cfa296c42a101e96e3 398 PANTHER PTHR10314 8 90 1.1E-178 T 22-04-2016 APECO1_RS16310 95a7d87de41454cfa296c42a101e96e3 398 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 375 2.3E-49 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS16310 95a7d87de41454cfa296c42a101e96e3 398 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 391 2.7E-210 T 22-04-2016 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 APECO1_RS16310 95a7d87de41454cfa296c42a101e96e3 398 Gene3D G3DSA:3.40.50.1100 114 390 2.8E-37 T 22-04-2016 APECO1_RS10175 f280d9f948d7fad2e551a8eb6e58ff3f 165 Gene3D G3DSA:1.20.1260.10 1 160 2.9E-58 T 22-04-2016 IPR012347 Ferritin-related APECO1_RS10175 f280d9f948d7fad2e551a8eb6e58ff3f 165 Pfam PF00210 Ferritin-like domain 7 143 3.0E-35 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APECO1_RS10175 f280d9f948d7fad2e551a8eb6e58ff3f 165 PANTHER PTHR11431 4 164 3.3E-46 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS10175 f280d9f948d7fad2e551a8eb6e58ff3f 165 SUPERFAMILY SSF47240 3 161 3.54E-56 T 22-04-2016 IPR009078 Ferritin-like superfamily APECO1_RS10175 f280d9f948d7fad2e551a8eb6e58ff3f 165 PANTHER PTHR11431:SF4 4 164 3.3E-46 T 22-04-2016 APECO1_RS07255 8cf02cbb6242c4a8343538a6ad011b1f 430 PANTHER PTHR30061:SF17 1 430 6.6E-151 T 22-04-2016 APECO1_RS07255 8cf02cbb6242c4a8343538a6ad011b1f 430 PANTHER PTHR30061 1 430 6.6E-151 T 22-04-2016 APECO1_RS07255 8cf02cbb6242c4a8343538a6ad011b1f 430 Pfam PF01547 Bacterial extracellular solute-binding protein 43 325 2.5E-38 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 APECO1_RS07255 8cf02cbb6242c4a8343538a6ad011b1f 430 SUPERFAMILY SSF53850 20 427 8.28E-59 T 22-04-2016 APECO1_RS07255 8cf02cbb6242c4a8343538a6ad011b1f 430 Gene3D G3DSA:3.40.190.10 149 348 6.8E-42 T 22-04-2016 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Gene3D G3DSA:1.10.287.130 657 726 7.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 SUPERFAMILY SSF55874 719 885 9.04E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Gene3D G3DSA:3.40.50.620 245 352 5.7E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 1.3E-97 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 PANTHER PTHR24423:SF562 22 197 2.9E-134 T 22-04-2016 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 PANTHER PTHR24423:SF562 597 880 2.9E-134 T 22-04-2016 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 SUPERFAMILY SSF52402 253 353 1.42E-5 T 22-04-2016 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 SMART SM00387 773 883 4.6E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Gene3D G3DSA:3.30.565.10 732 885 9.0E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 828 838 1.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 810 824 1.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 861 1.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 867 880 1.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 SUPERFAMILY SSF47384 653 731 3.92E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Pfam PF13493 Domain of unknown function (DUF4118) 403 507 3.8E-28 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 664 730 1.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Pfam PF13492 GAF domain 529 644 4.9E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Gene3D G3DSA:1.20.120.620 397 502 1.1E-38 T 22-04-2016 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Gene3D G3DSA:3.40.50.300 21 229 1.9E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 PANTHER PTHR24423 22 197 2.9E-134 T 22-04-2016 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 PANTHER PTHR24423 597 880 2.9E-134 T 22-04-2016 APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 776 882 9.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03380 65bb7a101fdd3ca1ce5e4de7e70563a8 894 SMART SM00388 663 730 1.4E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS02110 6ba014d31dffd29ee8c91e879e37f533 156 Gene3D G3DSA:3.40.50.960 2 152 4.5E-63 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS02110 6ba014d31dffd29ee8c91e879e37f533 156 SUPERFAMILY SSF52121 4 154 9.29E-59 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS02110 6ba014d31dffd29ee8c91e879e37f533 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.625 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS02110 6ba014d31dffd29ee8c91e879e37f533 156 PANTHER PTHR21058 1 156 4.9E-77 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS02110 6ba014d31dffd29ee8c91e879e37f533 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.1E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS02110 6ba014d31dffd29ee8c91e879e37f533 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 3.5E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 Gene3D G3DSA:1.10.287.130 251 322 1.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 Pfam PF00672 HAMP domain 191 256 8.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 PANTHER PTHR24423 59 157 4.5E-192 T 22-04-2016 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 PANTHER PTHR24423 201 480 4.5E-192 T 22-04-2016 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 SUPERFAMILY SSF47384 244 328 6.28E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 479 2.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 SMART SM00387 371 480 7.5E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 SMART SM00304 207 260 4.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 SMART SM00388 261 327 3.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 9 479 2.3E-157 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 SUPERFAMILY SSF55874 316 479 1.19E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 PANTHER PTHR24423:SF354 59 157 4.5E-192 T 22-04-2016 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 PANTHER PTHR24423:SF354 201 480 4.5E-192 T 22-04-2016 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 326 3.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 5.09E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 5.09E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 5.09E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 5.09E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS02745 e0c39d967ed2c6cf89f05039515b455c 480 Gene3D G3DSA:3.30.565.10 331 479 3.5E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS01775 a18ccab2d6f397c5e048d36eead51757 91 Pfam PF07338 Protein of unknown function (DUF1471) 37 89 4.5E-13 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS01775 a18ccab2d6f397c5e048d36eead51757 91 Gene3D G3DSA:3.30.1660.10 21 89 3.1E-22 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS01775 a18ccab2d6f397c5e048d36eead51757 91 SUPERFAMILY SSF159871 2 90 2.88E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS01775 a18ccab2d6f397c5e048d36eead51757 91 PANTHER PTHR34156 2 91 4.9E-57 T 22-04-2016 APECO1_RS01775 a18ccab2d6f397c5e048d36eead51757 91 PANTHER PTHR34156:SF8 2 91 4.9E-57 T 22-04-2016 APECO1_RS11380 4b3cfe37c5397b9aa9345ce2890a7cb8 159 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS11380 4b3cfe37c5397b9aa9345ce2890a7cb8 159 SUPERFAMILY SSF55811 2 152 4.2E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS11380 4b3cfe37c5397b9aa9345ce2890a7cb8 159 Pfam PF00293 NUDIX domain 22 142 2.0E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS11380 4b3cfe37c5397b9aa9345ce2890a7cb8 159 Hamap MF_00941 GDP-mannose mannosyl hydrolase [gmm]. 1 159 52.665 T 22-04-2016 IPR028613 GDP-mannose mannosyl hydrolase Gmm GO:0000287|GO:0008727 APECO1_RS11380 4b3cfe37c5397b9aa9345ce2890a7cb8 159 PIRSF PIRSF037599 1 152 9.5E-74 T 22-04-2016 IPR028613 GDP-mannose mannosyl hydrolase Gmm GO:0000287|GO:0008727 APECO1_RS11380 4b3cfe37c5397b9aa9345ce2890a7cb8 159 PANTHER PTHR22769 1 148 1.2E-101 T 22-04-2016 APECO1_RS11380 4b3cfe37c5397b9aa9345ce2890a7cb8 159 Gene3D G3DSA:3.90.79.10 6 151 8.1E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS11380 4b3cfe37c5397b9aa9345ce2890a7cb8 159 PANTHER PTHR22769:SF31 1 148 1.2E-101 T 22-04-2016 APECO1_RS23150 683eba4350d0e4ae3715257d23085b13 332 Gene3D G3DSA:3.40.50.300 178 327 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23150 683eba4350d0e4ae3715257d23085b13 332 Gene3D G3DSA:3.40.50.620 4 177 7.5E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS23150 683eba4350d0e4ae3715257d23085b13 332 Pfam PF13521 AAA domain 171 322 2.1E-31 T 22-04-2016 APECO1_RS23150 683eba4350d0e4ae3715257d23085b13 332 PANTHER PTHR37512 7 327 5.2E-32 T 22-04-2016 APECO1_RS23150 683eba4350d0e4ae3715257d23085b13 332 SUPERFAMILY SSF52374 6 155 2.51E-11 T 22-04-2016 APECO1_RS23150 683eba4350d0e4ae3715257d23085b13 332 SUPERFAMILY SSF52540 170 327 4.65E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10050 c95f164cd63770ad7bd51d67294e9469 130 Pfam PF06366 Flagellar protein FlhE 28 130 5.2E-38 T 22-04-2016 IPR009420 Flagellar protein FlhE APECO1_RS15685 c22ac6cb58cc8b11fea1edfbdf87d9b9 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 6.1E-33 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APECO1_RS15685 c22ac6cb58cc8b11fea1edfbdf87d9b9 120 SUPERFAMILY SSF55620 3 119 3.67E-40 T 22-04-2016 APECO1_RS15685 c22ac6cb58cc8b11fea1edfbdf87d9b9 120 PANTHER PTHR12589 5 120 3.3E-52 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APECO1_RS15685 c22ac6cb58cc8b11fea1edfbdf87d9b9 120 Gene3D G3DSA:3.30.479.10 2 120 1.6E-39 T 22-04-2016 APECO1_RS15685 c22ac6cb58cc8b11fea1edfbdf87d9b9 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 120 6.7E-34 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APECO1_RS15685 c22ac6cb58cc8b11fea1edfbdf87d9b9 120 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 3 119 1.3E-38 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APECO1_RS15685 c22ac6cb58cc8b11fea1edfbdf87d9b9 120 PIRSF PIRSF006113 1 120 2.2E-56 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 PANTHER PTHR11695 12 336 6.5E-148 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 SUPERFAMILY SSF50129 1 169 4.26E-47 T 22-04-2016 IPR011032 GroES-like APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 Gene3D G3DSA:3.90.180.10 1 164 4.8E-59 T 22-04-2016 IPR011032 GroES-like APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 SUPERFAMILY SSF51735 135 302 2.96E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 SMART SM00829 8 332 1.7E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 3.8E-29 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 Gene3D G3DSA:3.40.50.720 165 282 8.2E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 Pfam PF00107 Zinc-binding dehydrogenase 172 298 2.6E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APECO1_RS08185 b99d3e565dec405c3d21d6e0161379f9 336 PANTHER PTHR11695:SF498 12 336 6.5E-148 T 22-04-2016 APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 SUPERFAMILY SSF46785 6 90 2.27E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.0E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 SUPERFAMILY SSF53850 92 294 1.3E-36 T 22-04-2016 APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 Gene3D G3DSA:3.40.190.10 94 178 2.5E-16 T 22-04-2016 APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 PANTHER PTHR30537 1 297 8.2E-168 T 22-04-2016 APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 Gene3D G3DSA:1.10.10.10 6 90 2.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 Pfam PF03466 LysR substrate binding domain 90 294 8.4E-37 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 Gene3D G3DSA:3.40.190.10 179 263 1.5E-13 T 22-04-2016 APECO1_RS07350 118767d1e2a1ce8a2eb901763ffb5922 299 PANTHER PTHR30537:SF1 1 297 8.2E-168 T 22-04-2016 APECO1_RS01505 7a16d22071b46835719a743330204e12 236 SUPERFAMILY SSF49354 26 127 9.42E-8 T 22-04-2016 IPR008962 PapD-like APECO1_RS00845 eecf6b755b9a9b4068715fd9ae59dc6f 207 Pfam PF03458 UPF0126 domain 92 163 6.3E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 APECO1_RS00845 eecf6b755b9a9b4068715fd9ae59dc6f 207 Pfam PF03458 UPF0126 domain 4 78 3.6E-23 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 APECO1_RS00845 eecf6b755b9a9b4068715fd9ae59dc6f 207 PANTHER PTHR30506:SF3 1 207 8.8E-101 T 22-04-2016 APECO1_RS00845 eecf6b755b9a9b4068715fd9ae59dc6f 207 PANTHER PTHR30506 1 207 8.8E-101 T 22-04-2016 APECO1_RS08500 f44bef80a92af1c21539e354d2ccc624 108 PANTHER PTHR36116 1 102 4.7E-49 T 22-04-2016 APECO1_RS08500 f44bef80a92af1c21539e354d2ccc624 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.368 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 APECO1_RS08500 f44bef80a92af1c21539e354d2ccc624 108 SUPERFAMILY SSF103481 8 105 3.92E-6 T 22-04-2016 APECO1_RS08500 f44bef80a92af1c21539e354d2ccc624 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 8.6E-49 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 APECO1_RS08500 f44bef80a92af1c21539e354d2ccc624 108 PANTHER PTHR36116:SF1 1 102 4.7E-49 T 22-04-2016 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 PANTHER PTHR21098 1 208 1.1E-140 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 Gene3D G3DSA:2.40.30.20 105 199 1.9E-27 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 Gene3D G3DSA:2.40.30.20 5 104 2.3E-32 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 PIRSF PIRSF000498 1 212 1.6E-77 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 PANTHER PTHR21098:SF4 1 208 1.1E-140 T 22-04-2016 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 Pfam PF00677 Lumazine binding domain 100 185 1.0E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 Pfam PF00677 Lumazine binding domain 3 87 2.7E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 SUPERFAMILY SSF63380 1 93 6.04E-28 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 SUPERFAMILY SSF63380 94 201 3.66E-32 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APECO1_RS08920 ba36ec06b78cd67ac2924910795c560c 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 6.6E-92 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APECO1_RS03435 425b4f4dfb491199b9f5d316c4228838 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 310 3.5E-145 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APECO1_RS03435 425b4f4dfb491199b9f5d316c4228838 310 SUPERFAMILY SSF50891 173 288 1.33E-11 T 22-04-2016 IPR029000 Cyclophilin-like domain APECO1_RS03435 425b4f4dfb491199b9f5d316c4228838 310 Pfam PF02626 Allophanate hydrolase subunit 2 25 281 1.9E-92 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APECO1_RS03435 425b4f4dfb491199b9f5d316c4228838 310 Gene3D G3DSA:2.40.100.10 232 295 6.3E-4 T 22-04-2016 IPR029000 Cyclophilin-like domain APECO1_RS03435 425b4f4dfb491199b9f5d316c4228838 310 PANTHER PTHR18866 139 261 4.1E-43 T 22-04-2016 APECO1_RS03435 425b4f4dfb491199b9f5d316c4228838 310 SMART SM00797 23 298 2.4E-148 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 7.9E-129 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 PANTHER PTHR30520:SF4 12 228 1.4E-103 T 22-04-2016 APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 PANTHER PTHR30520:SF4 245 280 1.4E-103 T 22-04-2016 APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 4.6E-98 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 Pfam PF01226 Formate/nitrite transporter 15 276 2.7E-76 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 Gene3D G3DSA:1.20.1080.10 29 280 8.6E-91 T 22-04-2016 IPR023271 Aquaporin-like APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 PANTHER PTHR30520 12 228 1.4E-103 T 22-04-2016 APECO1_RS04630 61b646950d110aff8f6777315807ff2b 285 PANTHER PTHR30520 245 280 1.4E-103 T 22-04-2016 APECO1_RS19745 8a8d66bfc54ff75224d6fd622f63a8bb 281 PANTHER PTHR32243:SF31 1 279 1.8E-141 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 APECO1_RS19745 8a8d66bfc54ff75224d6fd622f63a8bb 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 1.8E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19745 8a8d66bfc54ff75224d6fd622f63a8bb 281 Gene3D G3DSA:1.10.3720.10 4 270 5.3E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19745 8a8d66bfc54ff75224d6fd622f63a8bb 281 SUPERFAMILY SSF161098 4 277 5.76E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19745 8a8d66bfc54ff75224d6fd622f63a8bb 281 PANTHER PTHR32243 1 279 1.8E-141 T 22-04-2016 APECO1_RS22055 0ac24f86baefe1d56d1e249f441da72a 208 PIRSF PIRSF001488 1 208 1.1E-92 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL APECO1_RS22055 0ac24f86baefe1d56d1e249f441da72a 208 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APECO1_RS22055 0ac24f86baefe1d56d1e249f441da72a 208 Gene3D G3DSA:3.40.30.10 1 119 6.7E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS22055 0ac24f86baefe1d56d1e249f441da72a 208 Gene3D G3DSA:3.40.30.10 121 203 1.3E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS22055 0ac24f86baefe1d56d1e249f441da72a 208 Pfam PF01323 DSBA-like thioredoxin domain 40 197 1.1E-30 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 APECO1_RS22055 0ac24f86baefe1d56d1e249f441da72a 208 PANTHER PTHR35891:SF2 1 208 5.5E-104 T 22-04-2016 APECO1_RS22055 0ac24f86baefe1d56d1e249f441da72a 208 PANTHER PTHR35891 1 208 5.5E-104 T 22-04-2016 APECO1_RS22055 0ac24f86baefe1d56d1e249f441da72a 208 SUPERFAMILY SSF52833 21 206 1.6E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 57 8.4E-22 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 Gene3D G3DSA:3.40.50.980 53 240 1.1E-35 T 22-04-2016 APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 628 0.0 T 22-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 PANTHER PTHR24095:SF165 1 628 0.0 T 22-04-2016 APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 SUPERFAMILY SSF56801 4 620 3.01E-157 T 22-04-2016 APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 592 5.8E-24 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 Gene3D G3DSA:3.30.300.30 495 606 4.5E-26 T 22-04-2016 APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 Gene3D G3DSA:2.30.38.10 410 490 1.4E-5 T 22-04-2016 APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 Pfam PF00501 AMP-binding enzyme 59 500 1.3E-79 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 PANTHER PTHR24095 1 628 0.0 T 22-04-2016 APECO1_RS01800 6b8f4d042620ff841e26f2438b87152b 628 Gene3D G3DSA:3.40.50.980 241 396 2.2E-26 T 22-04-2016 APECO1_RS07630 5c6a5e63a6ce1e0c7ebc17bc6874ec3d 370 Pfam PF04233 Phage Mu protein F like protein 153 273 4.2E-9 T 22-04-2016 IPR006528 Phage head morphogenesis domain APECO1_RS07630 5c6a5e63a6ce1e0c7ebc17bc6874ec3d 370 PIRSF PIRSF034565 6 370 1.8E-135 T 22-04-2016 IPR017029 Putative phage head morphogenesis protein APECO1_RS16340 c29633cacdebd2aa44bdd93e623dfff8 192 TIGRFAM TIGR03310 matur_MocA_YgfJ: molybdenum cofactor cytidylyltransferase 5 184 3.3E-64 T 22-04-2016 IPR017696 Molybdenum cofactor cytidylyltransferase MetaCyc: PWY-6476 APECO1_RS16340 c29633cacdebd2aa44bdd93e623dfff8 192 PANTHER PTHR19136 1 189 3.6E-53 T 22-04-2016 APECO1_RS16340 c29633cacdebd2aa44bdd93e623dfff8 192 Pfam PF12804 MobA-like NTP transferase domain 6 144 4.0E-24 T 22-04-2016 IPR025877 MobA-like NTP transferase APECO1_RS16340 c29633cacdebd2aa44bdd93e623dfff8 192 SUPERFAMILY SSF53448 1 189 6.08E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS16340 c29633cacdebd2aa44bdd93e623dfff8 192 PANTHER PTHR19136:SF78 1 189 3.6E-53 T 22-04-2016 APECO1_RS16340 c29633cacdebd2aa44bdd93e623dfff8 192 Gene3D G3DSA:3.90.550.10 1 189 3.8E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS03920 406ae8cf2eedc97d85850601afce86a8 741 PANTHER PTHR30460:SF0 4 740 0.0 T 22-04-2016 APECO1_RS03920 406ae8cf2eedc97d85850601afce86a8 741 SUPERFAMILY SSF82861 477 556 3.66E-12 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APECO1_RS03920 406ae8cf2eedc97d85850601afce86a8 741 Gene3D G3DSA:2.30.30.60 576 616 3.3E-8 T 22-04-2016 APECO1_RS03920 406ae8cf2eedc97d85850601afce86a8 741 PANTHER PTHR30460 4 740 0.0 T 22-04-2016 APECO1_RS03920 406ae8cf2eedc97d85850601afce86a8 741 SUPERFAMILY SSF82689 627 722 2.09E-8 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APECO1_RS03920 406ae8cf2eedc97d85850601afce86a8 741 Pfam PF00924 Mechanosensitive ion channel 515 714 4.4E-44 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APECO1_RS03920 406ae8cf2eedc97d85850601afce86a8 741 SUPERFAMILY SSF50182 558 616 1.28E-9 T 22-04-2016 IPR010920 LSM domain APECO1_RS16280 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 Pfam PF01551 Peptidase family M23 145 238 2.1E-31 T 22-04-2016 IPR016047 Peptidase M23 APECO1_RS16280 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 PANTHER PTHR21666:SF222 94 246 1.0E-120 T 22-04-2016 APECO1_RS16280 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 Gene3D G3DSA:3.10.350.10 40 84 1.7E-17 T 22-04-2016 IPR018392 LysM domain APECO1_RS16280 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 SMART SM00257 41 85 2.7E-16 T 22-04-2016 IPR018392 LysM domain APECO1_RS16280 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 SUPERFAMILY SSF51261 41 242 7.32E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif APECO1_RS16280 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 Gene3D G3DSA:2.70.70.10 104 243 9.0E-40 T 22-04-2016 APECO1_RS16280 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 PANTHER PTHR21666 94 246 1.0E-120 T 22-04-2016 APECO1_RS16280 e0f52d0ebb3ffe39d0f1436837f2b3d0 251 Pfam PF01476 LysM domain 42 84 4.6E-14 T 22-04-2016 IPR018392 LysM domain APECO1_RS12645 12a272c2393dd695cd88aac82e30a881 580 Pfam PF12450 von Willebrand factor 106 204 7.0E-33 T 22-04-2016 IPR022156 Uncharacterised protein YfbK, N-terminal APECO1_RS12645 12a272c2393dd695cd88aac82e30a881 580 SUPERFAMILY SSF53300 220 395 2.88E-36 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS12645 12a272c2393dd695cd88aac82e30a881 580 PANTHER PTHR10166:SF15 211 486 5.4E-129 T 22-04-2016 APECO1_RS12645 12a272c2393dd695cd88aac82e30a881 580 Pfam PF00092 von Willebrand factor type A domain 221 390 3.0E-23 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS12645 12a272c2393dd695cd88aac82e30a881 580 Gene3D G3DSA:3.40.50.410 221 393 3.1E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS12645 12a272c2393dd695cd88aac82e30a881 580 SMART SM00327 219 395 2.0E-31 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS12645 12a272c2393dd695cd88aac82e30a881 580 PANTHER PTHR10166 211 486 5.4E-129 T 22-04-2016 APECO1_RS12645 12a272c2393dd695cd88aac82e30a881 580 Pfam PF12034 Domain of unknown function (DUF3520) 398 574 1.0E-66 T 22-04-2016 IPR021908 Protein of unknown function DUF3520 APECO1_RS23095 e1f2a93061cce6b763963e1b027fbf03 331 SUPERFAMILY SSF51395 13 321 3.13E-71 T 22-04-2016 APECO1_RS23095 e1f2a93061cce6b763963e1b027fbf03 331 PANTHER PTHR11082:SF29 9 329 3.4E-170 T 22-04-2016 APECO1_RS23095 e1f2a93061cce6b763963e1b027fbf03 331 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 8 329 53.161 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 APECO1_RS23095 e1f2a93061cce6b763963e1b027fbf03 331 Pfam PF01207 Dihydrouridine synthase (Dus) 16 325 7.4E-101 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS23095 e1f2a93061cce6b763963e1b027fbf03 331 Gene3D G3DSA:3.20.20.70 13 253 8.0E-75 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS23095 e1f2a93061cce6b763963e1b027fbf03 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS23095 e1f2a93061cce6b763963e1b027fbf03 331 PANTHER PTHR11082 9 329 3.4E-170 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS23095 e1f2a93061cce6b763963e1b027fbf03 331 PIRSF PIRSF006621 3 327 2.8E-72 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APECO1_RS23095 e1f2a93061cce6b763963e1b027fbf03 331 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 328 1.9E-175 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 APECO1_RS11355 933e31ec1faa2d3fb9a8a38fb3ba7f69 492 PANTHER PTHR30250:SF3 1 491 2.3E-259 T 22-04-2016 APECO1_RS11355 933e31ec1faa2d3fb9a8a38fb3ba7f69 492 Pfam PF13440 Polysaccharide biosynthesis protein 31 325 6.5E-68 T 22-04-2016 APECO1_RS11355 933e31ec1faa2d3fb9a8a38fb3ba7f69 492 PANTHER PTHR30250 1 491 2.3E-259 T 22-04-2016 APECO1_RS02615 f9ff1aa97d8f5a6e078a727fec8258be 261 PANTHER PTHR34571 1 261 8.8E-104 T 22-04-2016 APECO1_RS02615 f9ff1aa97d8f5a6e078a727fec8258be 261 PANTHER PTHR34571:SF1 1 261 8.8E-104 T 22-04-2016 APECO1_RS02615 f9ff1aa97d8f5a6e078a727fec8258be 261 Pfam PF05899 Protein of unknown function (DUF861) 56 130 1.1E-9 T 22-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 APECO1_RS02615 f9ff1aa97d8f5a6e078a727fec8258be 261 SUPERFAMILY SSF51182 11 261 1.71E-68 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS02615 f9ff1aa97d8f5a6e078a727fec8258be 261 Pfam PF07883 Cupin domain 184 230 2.7E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APECO1_RS02615 f9ff1aa97d8f5a6e078a727fec8258be 261 Gene3D G3DSA:2.60.120.10 2 260 3.9E-101 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS02615 f9ff1aa97d8f5a6e078a727fec8258be 261 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 3 260 7.5E-116 T 22-04-2016 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 APECO1_RS19100 867e91e91e4f3ef5be606e588e7db950 136 PANTHER PTHR30258:SF9 22 136 8.1E-29 T 22-04-2016 APECO1_RS19100 867e91e91e4f3ef5be606e588e7db950 136 Gene3D G3DSA:3.30.450.90 85 135 3.3E-12 T 22-04-2016 APECO1_RS19100 867e91e91e4f3ef5be606e588e7db950 136 PANTHER PTHR30258 22 136 8.1E-29 T 22-04-2016 APECO1_RS07975 03fe14495a25c34d600ba7f0979f09d6 653 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS07975 03fe14495a25c34d600ba7f0979f09d6 653 PANTHER PTHR30217:SF10 1 652 2.4E-284 T 22-04-2016 APECO1_RS07975 03fe14495a25c34d600ba7f0979f09d6 653 Pfam PF12392 Collagenase 391 505 1.5E-18 T 22-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS07975 03fe14495a25c34d600ba7f0979f09d6 653 PANTHER PTHR30217 1 652 2.4E-284 T 22-04-2016 APECO1_RS07975 03fe14495a25c34d600ba7f0979f09d6 653 Pfam PF01136 Peptidase family U32 79 305 5.3E-71 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS22355 0deb4569ab5304e3809c51ae8fa7c904 251 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 31 249 5.6E-93 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 APECO1_RS22355 0deb4569ab5304e3809c51ae8fa7c904 251 PIRSF PIRSF001273 1 251 4.8E-113 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 APECO1_RS22355 0deb4569ab5304e3809c51ae8fa7c904 251 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 1 251 57.809 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 APECO1_RS22355 0deb4569ab5304e3809c51ae8fa7c904 251 TIGRFAM TIGR00672 cdh: CDP-diacylglycerol diphosphatase 1 251 3.9E-162 T 22-04-2016 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 APECO1_RS22355 0deb4569ab5304e3809c51ae8fa7c904 251 Gene3D G3DSA:3.30.428.30 26 251 5.3E-109 T 22-04-2016 APECO1_RS22355 0deb4569ab5304e3809c51ae8fa7c904 251 SUPERFAMILY SSF54197 31 249 8.16E-92 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APECO1_RS07460 8c74262c9ecc9135d3835e591c5354d5 64 Pfam PF14354 Restriction alleviation protein Lar 5 54 3.6E-11 T 22-04-2016 APECO1_RS07460 8c74262c9ecc9135d3835e591c5354d5 64 TIGRFAM TIGR03655 anti_R_Lar: restriction alleviation protein, Lar family 6 54 1.7E-15 T 22-04-2016 IPR019908 Restriction alleviation protein, Lar APECO1_RS02630 a60dfb768680881b1468cad334ed82d3 555 SUPERFAMILY SSF52210 339 493 1.13E-5 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS02630 a60dfb768680881b1468cad334ed82d3 555 PANTHER PTHR11117:SF10 32 555 3.4E-276 T 22-04-2016 APECO1_RS02630 a60dfb768680881b1468cad334ed82d3 555 SUPERFAMILY SSF52210 186 317 6.28E-16 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS02630 a60dfb768680881b1468cad334ed82d3 555 Gene3D G3DSA:3.40.50.261 166 291 2.0E-13 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS02630 a60dfb768680881b1468cad334ed82d3 555 Pfam PF00549 CoA-ligase 336 491 3.5E-50 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS02630 a60dfb768680881b1468cad334ed82d3 555 Pfam PF02629 CoA binding domain 193 287 1.4E-13 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS02630 a60dfb768680881b1468cad334ed82d3 555 PANTHER PTHR11117 32 555 3.4E-276 T 22-04-2016 APECO1_RS05255 69322bc3b27a5eeab049bf1fd120170d 110 Pfam PF10610 Thin aggregative fimbriae synthesis protein 6 103 3.4E-50 T 22-04-2016 IPR014491 Curli production protein CsgC APECO1_RS05255 69322bc3b27a5eeab049bf1fd120170d 110 PIRSF PIRSF018100 1 110 1.7E-70 T 22-04-2016 IPR014491 Curli production protein CsgC APECO1_RS00255 27c4e1815367513160dbbd05d7eb8594 443 PANTHER PTHR23511 1 431 4.8E-119 T 22-04-2016 APECO1_RS00255 27c4e1815367513160dbbd05d7eb8594 443 Gene3D G3DSA:1.20.1250.20 243 427 1.1E-15 T 22-04-2016 APECO1_RS00255 27c4e1815367513160dbbd05d7eb8594 443 Gene3D G3DSA:1.20.1250.20 17 202 2.8E-29 T 22-04-2016 APECO1_RS00255 27c4e1815367513160dbbd05d7eb8594 443 Pfam PF00083 Sugar (and other) transporter 32 433 4.2E-52 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS00255 27c4e1815367513160dbbd05d7eb8594 443 SUPERFAMILY SSF103473 8 429 8.24E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS16370 0f31c220ca4e731e36f7b6d2c9403839 438 SUPERFAMILY SSF51338 32 90 5.18E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16370 0f31c220ca4e731e36f7b6d2c9403839 438 SUPERFAMILY SSF51556 75 378 5.11E-105 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS16370 0f31c220ca4e731e36f7b6d2c9403839 438 Gene3D G3DSA:2.30.40.10 364 437 3.0E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16370 0f31c220ca4e731e36f7b6d2c9403839 438 Gene3D G3DSA:3.20.20.140 82 363 8.9E-120 T 22-04-2016 APECO1_RS16370 0f31c220ca4e731e36f7b6d2c9403839 438 Gene3D G3DSA:2.30.40.10 32 81 4.9E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS16370 0f31c220ca4e731e36f7b6d2c9403839 438 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 1.3E-191 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 APECO1_RS16370 0f31c220ca4e731e36f7b6d2c9403839 438 PANTHER PTHR11271:SF6 26 438 1.3E-178 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 APECO1_RS16370 0f31c220ca4e731e36f7b6d2c9403839 438 PANTHER PTHR11271 26 438 1.3E-178 T 22-04-2016 APECO1_RS16370 0f31c220ca4e731e36f7b6d2c9403839 438 Pfam PF01979 Amidohydrolase family 73 434 2.0E-84 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Pfam PF01842 ACT domain 345 401 5.2E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.1E-38 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 SUPERFAMILY SSF55021 328 409 1.15E-20 T 22-04-2016 APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 PANTHER PTHR10996:SF18 1 368 1.4E-248 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Gene3D G3DSA:3.30.70.260 324 409 1.1E-28 T 22-04-2016 APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 3.1E-50 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 SUPERFAMILY SSF52283 7 138 1.79E-50 T 22-04-2016 APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Gene3D G3DSA:3.40.50.720 121 297 3.0E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 SUPERFAMILY SSF51735 108 295 6.77E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 Gene3D G3DSA:3.40.50.720 8 120 2.5E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS16515 3717bd7ab503d25bbe3ebf6dbc73ec6e 410 PANTHER PTHR10996 1 368 1.4E-248 T 22-04-2016 APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 SUPERFAMILY SSF46785 2 109 7.07E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 Gene3D G3DSA:3.40.190.10 90 177 1.2E-14 T 22-04-2016 APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 SUPERFAMILY SSF53850 87 291 1.93E-41 T 22-04-2016 APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 PANTHER PTHR30126 1 303 1.6E-201 T 22-04-2016 APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 Gene3D G3DSA:1.10.10.10 1 87 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 PANTHER PTHR30126:SF25 1 303 1.6E-201 T 22-04-2016 APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 Pfam PF03466 LysR substrate binding domain 86 288 2.4E-43 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS21785 9b6a8b733b36c0c5fff70612045a5b76 317 Gene3D G3DSA:3.40.190.10 178 253 7.7E-20 T 22-04-2016 APECO1_RS11420 7976072ef1959caa3ff0126f178168ec 279 PANTHER PTHR22916:SF3 1 274 8.5E-45 T 22-04-2016 APECO1_RS11420 7976072ef1959caa3ff0126f178168ec 279 SUPERFAMILY SSF53448 5 233 2.34E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11420 7976072ef1959caa3ff0126f178168ec 279 Gene3D G3DSA:3.90.550.10 5 241 1.9E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11420 7976072ef1959caa3ff0126f178168ec 279 TIGRFAM TIGR04017 WcaA: colanic acid biosynthesis glycosyltransferase WcaA 1 279 2.2E-194 T 22-04-2016 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA UniPathway: UPA00936 APECO1_RS11420 7976072ef1959caa3ff0126f178168ec 279 PANTHER PTHR22916 1 274 8.5E-45 T 22-04-2016 APECO1_RS11420 7976072ef1959caa3ff0126f178168ec 279 Pfam PF00535 Glycosyl transferase family 2 8 154 9.0E-29 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS20665 f93f64fdf3f900b3f6a70f31ea436868 143 SMART SM00450 40 138 9.5E-22 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS20665 f93f64fdf3f900b3f6a70f31ea436868 143 PANTHER PTHR12231 1 143 1.4E-50 T 22-04-2016 APECO1_RS20665 f93f64fdf3f900b3f6a70f31ea436868 143 Gene3D G3DSA:3.40.250.10 22 142 2.8E-27 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS20665 f93f64fdf3f900b3f6a70f31ea436868 143 Pfam PF00581 Rhodanese-like domain 43 133 9.1E-17 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS20665 f93f64fdf3f900b3f6a70f31ea436868 143 PANTHER PTHR12231:SF138 1 143 1.4E-50 T 22-04-2016 APECO1_RS20665 f93f64fdf3f900b3f6a70f31ea436868 143 SUPERFAMILY SSF52821 15 142 2.62E-30 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS25025 27d0225e05c36870c78035150d0da9b2 255 Gene3D G3DSA:3.30.420.40 92 230 2.0E-46 T 22-04-2016 APECO1_RS25025 27d0225e05c36870c78035150d0da9b2 255 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 247 1.4E-109 T 22-04-2016 IPR008275 CoA enzyme activase APECO1_RS25025 27d0225e05c36870c78035150d0da9b2 255 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 247 1.2E-69 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type APECO1_RS25025 27d0225e05c36870c78035150d0da9b2 255 PANTHER PTHR32329 3 255 5.2E-126 T 22-04-2016 APECO1_RS25025 27d0225e05c36870c78035150d0da9b2 255 SUPERFAMILY SSF53067 3 246 7.35E-33 T 22-04-2016 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 PANTHER PTHR22855 1 317 1.1E-135 T 22-04-2016 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.561 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 Gene3D G3DSA:3.90.226.10 59 278 4.9E-49 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 2.4E-62 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 5.9E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 5.9E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 5.9E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 5.9E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 5.9E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 5.9E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 SUPERFAMILY SSF52096 5 318 3.73E-103 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS00975 1af14e9e678392a141ba079ad32bc379 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.0E-173 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APECO1_RS21665 fb401fece9052e3500b422390b8758d6 106 SUPERFAMILY SSF55387 1 105 1.19E-40 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APECO1_RS21665 fb401fece9052e3500b422390b8758d6 106 PANTHER PTHR16821 1 105 2.5E-42 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APECO1_RS21665 fb401fece9052e3500b422390b8758d6 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 22-04-2016 IPR020895 Frataxin conserved site APECO1_RS21665 fb401fece9052e3500b422390b8758d6 106 SMART SM01219 1 106 3.2E-57 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APECO1_RS21665 fb401fece9052e3500b422390b8758d6 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 6.1E-44 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APECO1_RS21665 fb401fece9052e3500b422390b8758d6 106 Pfam PF01491 Frataxin-like domain 1 102 1.7E-30 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APECO1_RS21665 fb401fece9052e3500b422390b8758d6 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.21 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APECO1_RS21665 fb401fece9052e3500b422390b8758d6 106 Gene3D G3DSA:3.30.920.10 1 105 3.6E-37 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APECO1_RS15065 c26d29154c638aedc0f505738361492a 313 PANTHER PTHR41287 1 86 8.6E-13 T 22-04-2016 APECO1_RS15065 c26d29154c638aedc0f505738361492a 313 Pfam PF13730 Helix-turn-helix domain 24 70 2.5E-10 T 22-04-2016 APECO1_RS15065 c26d29154c638aedc0f505738361492a 313 SUPERFAMILY SSF46785 29 76 4.01E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15065 c26d29154c638aedc0f505738361492a 313 Gene3D G3DSA:1.10.10.10 21 80 1.5E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17305 52103470a15a62370642d67e17843b41 563 Gene3D G3DSA:3.40.50.980 33 173 7.7E-26 T 22-04-2016 APECO1_RS17305 52103470a15a62370642d67e17843b41 563 Gene3D G3DSA:3.30.300.30 447 548 5.1E-23 T 22-04-2016 APECO1_RS17305 52103470a15a62370642d67e17843b41 563 Gene3D G3DSA:3.40.50.980 174 336 5.1E-31 T 22-04-2016 APECO1_RS17305 52103470a15a62370642d67e17843b41 563 SUPERFAMILY SSF56801 370 551 3.14E-95 T 22-04-2016 APECO1_RS17305 52103470a15a62370642d67e17843b41 563 SUPERFAMILY SSF56801 32 341 3.14E-95 T 22-04-2016 APECO1_RS17305 52103470a15a62370642d67e17843b41 563 Pfam PF00501 AMP-binding enzyme 33 454 4.3E-73 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS17305 52103470a15a62370642d67e17843b41 563 Gene3D G3DSA:2.30.38.10 374 446 1.0E-16 T 22-04-2016 APECO1_RS17305 52103470a15a62370642d67e17843b41 563 PANTHER PTHR22754 25 548 1.7E-107 T 22-04-2016 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 Gene3D G3DSA:3.20.20.60 484 791 7.6E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 PIRSF PIRSF000854 4 792 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 SUPERFAMILY SSF56059 7 386 1.53E-109 T 22-04-2016 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 PANTHER PTHR22931 2 271 0.0 T 22-04-2016 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 PANTHER PTHR22931 287 792 0.0 T 22-04-2016 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 SUPERFAMILY SSF52009 350 468 2.22E-35 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 350 1.4E-121 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 Gene3D G3DSA:3.30.1490.20 8 197 7.3E-69 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 7.5E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 Gene3D G3DSA:3.30.470.20 199 357 1.4E-61 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 SUPERFAMILY SSF51621 467 790 7.59E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 PANTHER PTHR22931:SF7 2 271 0.0 T 22-04-2016 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 PANTHER PTHR22931:SF7 287 792 0.0 T 22-04-2016 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 789 1.0E-59 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 APECO1_RS09135 e1434b1af40f4f62639d2c988d4bea25 792 Gene3D G3DSA:3.50.30.10 376 473 1.0E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APECO1_RS14575 60d47d2a72c2cc369ab34141c8fb918b 195 PANTHER PTHR30086:SF12 1 195 2.2E-37 T 22-04-2016 APECO1_RS14575 60d47d2a72c2cc369ab34141c8fb918b 195 Pfam PF01810 LysE type translocator 15 194 4.6E-14 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS14575 60d47d2a72c2cc369ab34141c8fb918b 195 PANTHER PTHR30086 1 195 2.2E-37 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS06575 40b17d990f82a1c1cc648d5afe5c31f4 215 PANTHER PTHR33508:SF1 4 215 4.8E-107 T 22-04-2016 APECO1_RS06575 40b17d990f82a1c1cc648d5afe5c31f4 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 5.5E-86 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APECO1_RS06575 40b17d990f82a1c1cc648d5afe5c31f4 215 PANTHER PTHR33508 4 215 4.8E-107 T 22-04-2016 APECO1_RS06575 40b17d990f82a1c1cc648d5afe5c31f4 215 Pfam PF01914 MarC family integral membrane protein 9 210 3.7E-76 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APECO1_RS01030 28c843482f0284ac4d271450fa27d9e3 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 149 3.4E-62 T 22-04-2016 IPR023370 TsaA-like domain APECO1_RS01030 28c843482f0284ac4d271450fa27d9e3 235 Gene3D G3DSA:2.40.30.70 4 157 1.1E-52 T 22-04-2016 IPR023370 TsaA-like domain APECO1_RS01030 28c843482f0284ac4d271450fa27d9e3 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 1.2E-41 T 22-04-2016 IPR023370 TsaA-like domain APECO1_RS01030 28c843482f0284ac4d271450fa27d9e3 235 PANTHER PTHR12818:SF6 1 235 2.0E-147 T 22-04-2016 APECO1_RS01030 28c843482f0284ac4d271450fa27d9e3 235 SUPERFAMILY SSF118196 1 229 7.19E-85 T 22-04-2016 IPR023370 TsaA-like domain APECO1_RS01030 28c843482f0284ac4d271450fa27d9e3 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site APECO1_RS01030 28c843482f0284ac4d271450fa27d9e3 235 PANTHER PTHR12818 1 235 2.0E-147 T 22-04-2016 APECO1_RS06500 ea52a1b4afe3177f23c6cbec9ceccb7d 236 PANTHER PTHR30598:SF1 1 216 1.6E-95 T 22-04-2016 APECO1_RS06500 ea52a1b4afe3177f23c6cbec9ceccb7d 236 SUPERFAMILY SSF89155 5 163 1.96E-32 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS06500 ea52a1b4afe3177f23c6cbec9ceccb7d 236 Gene3D G3DSA:1.10.3480.10 10 134 1.8E-7 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS06500 ea52a1b4afe3177f23c6cbec9ceccb7d 236 PANTHER PTHR30598 1 216 1.6E-95 T 22-04-2016 APECO1_RS06500 ea52a1b4afe3177f23c6cbec9ceccb7d 236 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 6.6E-64 T 22-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 APECO1_RS06500 ea52a1b4afe3177f23c6cbec9ceccb7d 236 Pfam PF02613 Nitrate reductase delta subunit 48 156 1.1E-12 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS21040 e0ac282989dc6efa23fad507218a912f 497 Gene3D G3DSA:3.30.1120.10 373 453 9.8E-20 T 22-04-2016 APECO1_RS21040 e0ac282989dc6efa23fad507218a912f 497 Pfam PF00884 Sulfatase 4 341 5.0E-80 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS21040 e0ac282989dc6efa23fad507218a912f 497 Gene3D G3DSA:3.40.720.10 2 354 1.9E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS21040 e0ac282989dc6efa23fad507218a912f 497 SUPERFAMILY SSF53649 2 440 2.11E-104 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS21040 e0ac282989dc6efa23fad507218a912f 497 Pfam PF16347 Domain of unknown function (DUF4976) 385 439 3.0E-7 T 22-04-2016 IPR032506 Domain of unknown function DUF4976 APECO1_RS21040 e0ac282989dc6efa23fad507218a912f 497 PANTHER PTHR10342 2 465 4.0E-108 T 22-04-2016 APECO1_RS21040 e0ac282989dc6efa23fad507218a912f 497 ProSitePatterns PS00149 Sulfatases signature 2. 92 102 - T 22-04-2016 IPR024607 Sulfatase, conserved site APECO1_RS21040 e0ac282989dc6efa23fad507218a912f 497 PANTHER PTHR10342:SF207 2 465 4.0E-108 T 22-04-2016 APECO1_RS21040 e0ac282989dc6efa23fad507218a912f 497 ProSitePatterns PS00523 Sulfatases signature 1. 50 62 - T 22-04-2016 IPR024607 Sulfatase, conserved site APECO1_RS03695 0639b20cf3ac786a05448d88881ef32e 229 SUPERFAMILY SSF161098 6 220 3.92E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03695 0639b20cf3ac786a05448d88881ef32e 229 Gene3D G3DSA:1.10.3720.10 8 226 1.6E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03695 0639b20cf3ac786a05448d88881ef32e 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 215 8.4E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03695 0639b20cf3ac786a05448d88881ef32e 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 221 1.3E-71 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 APECO1_RS03695 0639b20cf3ac786a05448d88881ef32e 229 PANTHER PTHR30183 1 227 2.9E-90 T 22-04-2016 APECO1_RS08735 79bf4b6ae994eeb2ee5ab18805b1f29b 193 PIRSF PIRSF006102 1 193 8.7E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APECO1_RS08735 79bf4b6ae994eeb2ee5ab18805b1f29b 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 3.5E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APECO1_RS08735 79bf4b6ae994eeb2ee5ab18805b1f29b 193 PANTHER PTHR30335:SF0 2 193 1.5E-134 T 22-04-2016 APECO1_RS08735 79bf4b6ae994eeb2ee5ab18805b1f29b 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.514 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APECO1_RS08735 79bf4b6ae994eeb2ee5ab18805b1f29b 193 PANTHER PTHR30335 2 193 1.5E-134 T 22-04-2016 APECO1_RS08735 79bf4b6ae994eeb2ee5ab18805b1f29b 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 3.3E-92 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APECO1_RS03430 5202ebae449804f86fcab1c7b736aeea 218 PANTHER PTHR34698 2 215 2.6E-98 T 22-04-2016 APECO1_RS03430 5202ebae449804f86fcab1c7b736aeea 218 PANTHER PTHR34698:SF2 2 215 2.6E-98 T 22-04-2016 APECO1_RS03430 5202ebae449804f86fcab1c7b736aeea 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 3.5E-107 T 22-04-2016 IPR010016 KipI family APECO1_RS03430 5202ebae449804f86fcab1c7b736aeea 218 SUPERFAMILY SSF50891 88 214 2.09E-47 T 22-04-2016 IPR029000 Cyclophilin-like domain APECO1_RS03430 5202ebae449804f86fcab1c7b736aeea 218 Gene3D G3DSA:2.40.100.10 88 213 2.8E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain APECO1_RS03430 5202ebae449804f86fcab1c7b736aeea 218 SUPERFAMILY SSF160467 5 93 1.57E-9 T 22-04-2016 APECO1_RS03430 5202ebae449804f86fcab1c7b736aeea 218 Gene3D G3DSA:3.30.1360.40 6 79 2.4E-8 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APECO1_RS03430 5202ebae449804f86fcab1c7b736aeea 218 SMART SM00796 4 202 1.0E-96 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APECO1_RS03430 5202ebae449804f86fcab1c7b736aeea 218 Pfam PF02682 Allophanate hydrolase subunit 1 6 202 1.7E-71 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APECO1_RS18035 b9091301e1f49778613b8c301dc56a1d 436 PANTHER PTHR30501 2 436 7.5E-145 T 22-04-2016 APECO1_RS18035 b9091301e1f49778613b8c301dc56a1d 436 PIRSF PIRSF006054 5 435 6.6E-184 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 APECO1_RS18035 b9091301e1f49778613b8c301dc56a1d 436 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 433 35.154 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 APECO1_RS18035 b9091301e1f49778613b8c301dc56a1d 436 Pfam PF03313 Serine dehydratase alpha chain 180 428 3.9E-48 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APECO1_RS18035 b9091301e1f49778613b8c301dc56a1d 436 PANTHER PTHR30501:SF2 2 436 7.5E-145 T 22-04-2016 APECO1_RS09405 839123f791979704682bc1810a6acb41 511 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 346 503 2.7E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS09405 839123f791979704682bc1810a6acb41 511 SUPERFAMILY SSF161098 9 255 8.61E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS09405 839123f791979704682bc1810a6acb41 511 PANTHER PTHR30183:SF6 1 509 2.7E-288 T 22-04-2016 APECO1_RS09405 839123f791979704682bc1810a6acb41 511 PANTHER PTHR30183 1 509 2.7E-288 T 22-04-2016 APECO1_RS09405 839123f791979704682bc1810a6acb41 511 Gene3D G3DSA:1.10.3720.10 9 262 3.9E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS09405 839123f791979704682bc1810a6acb41 511 Gene3D G3DSA:1.10.3720.10 313 501 4.7E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS09405 839123f791979704682bc1810a6acb41 511 SUPERFAMILY SSF161098 307 497 1.96E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS20105 b4df2faebba4bf75e1f2588a6f1fbb9d 256 PANTHER PTHR24220:SF558 3 253 5.5E-90 T 22-04-2016 APECO1_RS20105 b4df2faebba4bf75e1f2588a6f1fbb9d 256 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS20105 b4df2faebba4bf75e1f2588a6f1fbb9d 256 PANTHER PTHR24220 3 253 5.5E-90 T 22-04-2016 APECO1_RS20105 b4df2faebba4bf75e1f2588a6f1fbb9d 256 SUPERFAMILY SSF52540 2 229 1.22E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20105 b4df2faebba4bf75e1f2588a6f1fbb9d 256 Gene3D G3DSA:3.40.50.300 3 232 3.0E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20105 b4df2faebba4bf75e1f2588a6f1fbb9d 256 SMART SM00382 26 215 4.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS20105 b4df2faebba4bf75e1f2588a6f1fbb9d 256 Pfam PF00005 ABC transporter 18 166 9.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 Pfam PF00042 Globin 7 103 7.3E-15 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 Gene3D G3DSA:2.40.30.10 149 254 7.8E-33 T 22-04-2016 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 Gene3D G3DSA:1.10.490.10 2 140 1.6E-54 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 57.458 T 22-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 Gene3D G3DSA:3.40.50.80 259 394 7.2E-36 T 22-04-2016 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 SUPERFAMILY SSF46458 1 142 3.49E-38 T 22-04-2016 IPR009050 Globin-like APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 2.3E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 3.8E-17 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 SUPERFAMILY SSF52343 256 394 1.07E-37 T 22-04-2016 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 PANTHER PTHR22924 1 396 6.0E-129 T 22-04-2016 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 4.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APECO1_RS14430 72d09b769b9724b81784b324bccd83a5 396 SUPERFAMILY SSF63380 148 253 4.43E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 SUPERFAMILY SSF55874 336 476 7.07E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 PANTHER PTHR24423 209 486 6.2E-180 T 22-04-2016 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 PANTHER PTHR24423 11 16 6.2E-180 T 22-04-2016 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 PANTHER PTHR24423 56 153 6.2E-180 T 22-04-2016 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 SUPERFAMILY SSF47384 250 319 5.3E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 Pfam PF08918 PhoQ Sensor 10 188 2.9E-85 T 22-04-2016 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 PANTHER PTHR24423:SF496 209 486 6.2E-180 T 22-04-2016 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 PANTHER PTHR24423:SF496 11 16 6.2E-180 T 22-04-2016 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 PANTHER PTHR24423:SF496 56 153 6.2E-180 T 22-04-2016 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 SMART SM00387 374 480 6.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 Gene3D G3DSA:3.30.565.10 340 483 7.7E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.2E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.2E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 Pfam PF00672 HAMP domain 196 260 2.8E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS05700 5c8e8471b4872ab177300e942f8c27c4 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 465 1.9E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS03115 195e3eebb8f0043dc7198a619ee16f5c 193 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 164 26.183 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APECO1_RS03115 195e3eebb8f0043dc7198a619ee16f5c 193 Pfam PF04390 Lipopolysaccharide-assembly 11 159 5.2E-22 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APECO1_RS03115 195e3eebb8f0043dc7198a619ee16f5c 193 PANTHER PTHR38098:SF1 1 189 1.2E-69 T 22-04-2016 APECO1_RS03115 195e3eebb8f0043dc7198a619ee16f5c 193 PANTHER PTHR38098 1 189 1.2E-69 T 22-04-2016 APECO1_RS03115 195e3eebb8f0043dc7198a619ee16f5c 193 Gene3D G3DSA:3.30.160.150 19 171 1.5E-58 T 22-04-2016 APECO1_RS23605 7500d26e0b5a32c3c174bb9ac78a969e 239 PANTHER PTHR26402 2 188 6.5E-74 T 22-04-2016 APECO1_RS23605 7500d26e0b5a32c3c174bb9ac78a969e 239 SUPERFAMILY SSF52172 1 136 3.27E-28 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS23605 7500d26e0b5a32c3c174bb9ac78a969e 239 Gene3D G3DSA:1.10.10.60 160 192 4.1E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23605 7500d26e0b5a32c3c174bb9ac78a969e 239 PANTHER PTHR26402:SF522 2 188 6.5E-74 T 22-04-2016 APECO1_RS23605 7500d26e0b5a32c3c174bb9ac78a969e 239 Pfam PF00072 Response regulator receiver domain 4 117 9.6E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS23605 7500d26e0b5a32c3c174bb9ac78a969e 239 PIRSF PIRSF006171 1 230 6.2E-83 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 APECO1_RS23605 7500d26e0b5a32c3c174bb9ac78a969e 239 Gene3D G3DSA:3.40.50.2300 1 130 6.7E-24 T 22-04-2016 APECO1_RS23605 7500d26e0b5a32c3c174bb9ac78a969e 239 SMART SM00448 2 117 1.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS17585 9e84e58261dc8201c56885ceaac9be56 110 Pfam PF10840 Protein of unknown function (DUF2645) 13 109 4.5E-11 T 22-04-2016 IPR022553 Protein of unknown function DUF2645 APECO1_RS17585 9e84e58261dc8201c56885ceaac9be56 110 ProDom PD072223 MEMBRANE INNER YGIZ TRANSMEMBRANE 3 109 2.0E-43 T 22-04-2016 APECO1_RS12975 229a5ffefec6f7cf89e088b5dc4b3771 882 PANTHER PTHR30451:SF10 1 847 0.0 T 22-04-2016 APECO1_RS12975 229a5ffefec6f7cf89e088b5dc4b3771 882 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 321 331 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APECO1_RS12975 229a5ffefec6f7cf89e088b5dc4b3771 882 PANTHER PTHR30451 1 847 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS12975 229a5ffefec6f7cf89e088b5dc4b3771 882 Pfam PF13953 PapC C-terminal domain 770 825 9.3E-14 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APECO1_RS12975 229a5ffefec6f7cf89e088b5dc4b3771 882 SUPERFAMILY SSF141729 33 154 2.62E-27 T 22-04-2016 APECO1_RS12975 229a5ffefec6f7cf89e088b5dc4b3771 882 Pfam PF13954 PapC N-terminal domain 34 180 4.2E-36 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APECO1_RS12975 229a5ffefec6f7cf89e088b5dc4b3771 882 Pfam PF00577 Outer membrane usher protein 197 759 1.3E-196 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS25040 a7d7aa93e7ffee8fca4f6eb1c7a2d056 306 PANTHER PTHR34611:SF3 2 294 2.4E-171 T 22-04-2016 APECO1_RS25040 a7d7aa93e7ffee8fca4f6eb1c7a2d056 306 PANTHER PTHR34611 2 294 2.4E-171 T 22-04-2016 APECO1_RS25040 a7d7aa93e7ffee8fca4f6eb1c7a2d056 306 Pfam PF04754 Putative transposase, YhgA-like 8 210 5.4E-88 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like APECO1_RS25040 a7d7aa93e7ffee8fca4f6eb1c7a2d056 306 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 289 1.6E-47 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 APECO1_RS09850 978ab0be631216d13082720ee35d2982 112 Pfam PF10709 Protein of unknown function (DUF2511) 25 112 3.3E-44 T 22-04-2016 IPR019648 Protein of unknown function DUF2511 APECO1_RS09030 434cb250e4b429b9a0a450d42eae9bed 248 Gene3D G3DSA:3.40.50.300 1 236 6.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09030 434cb250e4b429b9a0a450d42eae9bed 248 PANTHER PTHR24220 3 248 9.0E-128 T 22-04-2016 APECO1_RS09030 434cb250e4b429b9a0a450d42eae9bed 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 1.2E-114 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 APECO1_RS09030 434cb250e4b429b9a0a450d42eae9bed 248 PANTHER PTHR24220:SF85 3 248 9.0E-128 T 22-04-2016 APECO1_RS09030 434cb250e4b429b9a0a450d42eae9bed 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS09030 434cb250e4b429b9a0a450d42eae9bed 248 SUPERFAMILY SSF52540 2 231 1.69E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09030 434cb250e4b429b9a0a450d42eae9bed 248 Pfam PF00005 ABC transporter 17 172 3.8E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS09030 434cb250e4b429b9a0a450d42eae9bed 248 SMART SM00382 26 223 7.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS09930 2e99040409d03b424c3211e045216756 289 SUPERFAMILY SSF46689 1 80 6.27E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS09930 2e99040409d03b424c3211e045216756 289 Gene3D G3DSA:3.40.50.10490 97 270 6.9E-41 T 22-04-2016 APECO1_RS09930 2e99040409d03b424c3211e045216756 289 Pfam PF01380 SIS domain 124 252 2.6E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS09930 2e99040409d03b424c3211e045216756 289 PANTHER PTHR30514:SF7 1 271 1.9E-198 T 22-04-2016 APECO1_RS09930 2e99040409d03b424c3211e045216756 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.2E-32 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APECO1_RS09930 2e99040409d03b424c3211e045216756 289 SUPERFAMILY SSF53697 94 280 2.23E-43 T 22-04-2016 APECO1_RS09930 2e99040409d03b424c3211e045216756 289 PANTHER PTHR30514 1 271 1.9E-198 T 22-04-2016 APECO1_RS09930 2e99040409d03b424c3211e045216756 289 Gene3D G3DSA:1.10.10.10 1 80 1.9E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 Pfam PF16200 C-terminal region of band_7 238 297 3.7E-7 T 22-04-2016 IPR032435 Band 7, C-terminal extension APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 171 192 3.4E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 108 125 3.4E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 128 151 3.4E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 152 170 3.4E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 PRINTS PR00721 Stomatin signature 73 94 3.4E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 PANTHER PTHR10264:SF27 1 304 8.3E-128 T 22-04-2016 APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 SUPERFAMILY SSF117892 49 183 2.75E-41 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 PANTHER PTHR10264 1 304 8.3E-128 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 Pfam PF01145 SPFH domain / Band 7 family 22 203 7.8E-34 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS02520 8e611a4de452fc9d06b5ec86cf4671fc 305 SMART SM00244 18 176 6.3E-60 T 22-04-2016 IPR001107 Band 7 domain APECO1_RS24575 36d8fedeee45aafe53ee14130e2978d3 340 PANTHER PTHR32196 10 340 6.4E-207 T 22-04-2016 APECO1_RS24575 36d8fedeee45aafe53ee14130e2978d3 340 PANTHER PTHR32196:SF19 10 340 6.4E-207 T 22-04-2016 APECO1_RS24575 36d8fedeee45aafe53ee14130e2978d3 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 320 5.7E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS19860 523221cc867ee2bd766bb3390d7edbb2 89 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 2.4E-27 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 APECO1_RS19860 523221cc867ee2bd766bb3390d7edbb2 89 PANTHER PTHR38775:SF1 1 89 1.7E-30 T 22-04-2016 APECO1_RS19860 523221cc867ee2bd766bb3390d7edbb2 89 PANTHER PTHR38775 1 89 1.7E-30 T 22-04-2016 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 SMART SM01134 73 233 3.6E-65 T 22-04-2016 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 PANTHER PTHR30363:SF13 1 253 9.0E-88 T 22-04-2016 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 2.1E-47 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 SMART SM00420 6 58 2.3E-21 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 4.0E-19 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 SUPERFAMILY SSF46785 5 72 5.86E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 Gene3D G3DSA:3.40.50.1360 77 212 4.1E-9 T 22-04-2016 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 Gene3D G3DSA:1.10.10.10 1 59 6.4E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 SUPERFAMILY SSF100950 76 234 1.15E-26 T 22-04-2016 APECO1_RS03295 a5996f02ad4384bf2ee620fdb59ee768 253 PANTHER PTHR30363 1 253 9.0E-88 T 22-04-2016 APECO1_RS11190 5b7bd0757781a89b965f0cfb149af7d9 474 Pfam PF00929 Exonuclease 12 187 9.5E-32 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS11190 5b7bd0757781a89b965f0cfb149af7d9 474 SMART SM00479 9 202 0.0015 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS11190 5b7bd0757781a89b965f0cfb149af7d9 474 Gene3D G3DSA:3.30.420.10 3 200 6.7E-88 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS11190 5b7bd0757781a89b965f0cfb149af7d9 474 Pfam PF08411 Exonuclease C-terminal 211 471 1.7E-103 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 APECO1_RS11190 5b7bd0757781a89b965f0cfb149af7d9 474 SUPERFAMILY SSF53098 8 473 1.71E-135 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS11190 5b7bd0757781a89b965f0cfb149af7d9 474 PIRSF PIRSF000977 2 474 2.3E-201 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 APECO1_RS11190 5b7bd0757781a89b965f0cfb149af7d9 474 PANTHER PTHR11046:SF2 1 474 0.0 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 APECO1_RS11190 5b7bd0757781a89b965f0cfb149af7d9 474 PANTHER PTHR11046 1 474 0.0 T 22-04-2016 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 SUPERFAMILY SSF53649 34 470 2.26E-141 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 PANTHER PTHR11596:SF5 317 470 8.2E-154 T 22-04-2016 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 PANTHER PTHR11596:SF5 52 294 8.2E-154 T 22-04-2016 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 Gene3D G3DSA:3.40.720.10 48 470 1.6E-141 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 PRINTS PR00113 Alkaline phosphatase signature 121 136 1.2E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 PRINTS PR00113 Alkaline phosphatase signature 64 84 1.2E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 PRINTS PR00113 Alkaline phosphatase signature 320 349 1.2E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 PRINTS PR00113 Alkaline phosphatase signature 221 231 1.2E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 PRINTS PR00113 Alkaline phosphatase signature 158 178 1.2E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 PANTHER PTHR11596 317 470 8.2E-154 T 22-04-2016 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 ProSitePatterns PS00123 Alkaline phosphatase active site. 121 129 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 SMART SM00098 65 471 6.6E-241 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 PANTHER PTHR11596 52 294 8.2E-154 T 22-04-2016 APECO1_RS01950 1835f0bfe9431b7894336c81b00f99c9 471 Pfam PF00245 Alkaline phosphatase 64 430 5.9E-134 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 Gene3D G3DSA:1.10.1670.10 123 208 1.4E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.1E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.5E-90 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 PIRSF PIRSF001435 1 210 2.5E-52 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 PANTHER PTHR10359:SF18 5 210 1.9E-93 T 22-04-2016 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 SMART SM00478 38 185 9.8E-55 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 PANTHER PTHR10359 5 210 1.9E-93 T 22-04-2016 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.662 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.2E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 SMART SM00525 186 206 1.4E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 SUPERFAMILY SSF48150 3 208 3.3E-74 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APECO1_RS08765 2e3946f18d148e9aa5d7104f4a7b2eeb 211 Gene3D G3DSA:1.10.340.30 22 122 2.2E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.30.2060.10 159 231 6.9E-11 T 22-04-2016 APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF04851 Type III restriction enzyme, res subunit 13 92 2.3E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF00271 Helicase conserved C-terminal domain 434 545 1.1E-18 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF52540 3 415 3.0E-139 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 668 44.417 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 419 582 5.6E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF46600 624 669 1.31E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 SMART SM00490 460 546 3.8E-20 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 SMART SM00487 9 425 6.3E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF02151 UvrB/uvrC motif 634 667 1.7E-6 T 22-04-2016 IPR001943 UVR domain GO:0005515 APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.1E-21 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF52540 459 581 1.07E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:4.10.860.10 622 670 5.6E-19 T 22-04-2016 IPR001943 UVR domain GO:0005515 APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 278 338 1.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 388 408 1.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 Gene3D G3DSA:3.40.50.300 5 89 1.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 SUPERFAMILY SSF52540 37 82 1.07E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 666 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APECO1_RS03770 ec0a6df625d8492ad92d6b933cb6f65f 673 PANTHER PTHR24029 1 672 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APECO1_RS11495 2ace16e0cb4fde13215a34a9743ef8c5 219 SUPERFAMILY SSF53300 21 172 4.6E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS11495 2ace16e0cb4fde13215a34a9743ef8c5 219 SMART SM00327 19 193 2.7E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS11495 2ace16e0cb4fde13215a34a9743ef8c5 219 Pfam PF00092 von Willebrand factor type A domain 24 173 6.3E-11 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS11495 2ace16e0cb4fde13215a34a9743ef8c5 219 PIRSF PIRSF020634 17 219 1.6E-96 T 22-04-2016 IPR011392 Tellurite resistance, TerY APECO1_RS11495 2ace16e0cb4fde13215a34a9743ef8c5 219 Gene3D G3DSA:3.40.50.410 23 173 1.8E-11 T 22-04-2016 IPR002035 von Willebrand factor, type A APECO1_RS24285 50ba39a5e7587e96d30d0fca5fd4db4b 65 PANTHER PTHR38602 1 64 2.5E-26 T 22-04-2016 APECO1_RS24285 50ba39a5e7587e96d30d0fca5fd4db4b 65 PANTHER PTHR38602:SF1 1 64 2.5E-26 T 22-04-2016 APECO1_RS24285 50ba39a5e7587e96d30d0fca5fd4db4b 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 1.4E-21 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 APECO1_RS04985 ace5cdc6530e758c5f5a5a15bde2f1bc 378 PANTHER PTHR30365:SF2 1 378 1.4E-303 T 22-04-2016 APECO1_RS04985 ace5cdc6530e758c5f5a5a15bde2f1bc 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 3.1E-197 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APECO1_RS04985 ace5cdc6530e758c5f5a5a15bde2f1bc 378 PIRSF PIRSF000267 2 377 5.9E-116 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APECO1_RS04985 ace5cdc6530e758c5f5a5a15bde2f1bc 378 PANTHER PTHR30365 1 378 1.4E-303 T 22-04-2016 APECO1_RS04985 ace5cdc6530e758c5f5a5a15bde2f1bc 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 5.0E-96 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APECO1_RS00950 46caa69780821a1c8b8b3d0bd5790569 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.4E-60 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APECO1_RS00950 46caa69780821a1c8b8b3d0bd5790569 151 PANTHER PTHR30272 1 151 4.7E-89 T 22-04-2016 APECO1_RS00950 46caa69780821a1c8b8b3d0bd5790569 151 Pfam PF07977 FabA-like domain 17 141 1.9E-40 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APECO1_RS00950 46caa69780821a1c8b8b3d0bd5790569 151 SUPERFAMILY SSF54637 10 149 1.13E-50 T 22-04-2016 IPR029069 HotDog domain APECO1_RS00950 46caa69780821a1c8b8b3d0bd5790569 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.519 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APECO1_RS00950 46caa69780821a1c8b8b3d0bd5790569 151 Gene3D G3DSA:3.10.129.10 4 147 5.6E-59 T 22-04-2016 IPR029069 HotDog domain APECO1_RS23940 e662af2909486addef00277bda137b8c 434 Gene3D G3DSA:3.40.50.620 150 368 7.5E-11 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS23940 e662af2909486addef00277bda137b8c 434 SUPERFAMILY SSF52402 151 366 1.91E-10 T 22-04-2016 APECO1_RS09475 511869f621bc78ff5612d7b90280bdff 213 Gene3D G3DSA:3.40.50.850 4 208 3.1E-65 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS09475 511869f621bc78ff5612d7b90280bdff 213 Pfam PF00857 Isochorismatase family 5 207 3.1E-37 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS09475 511869f621bc78ff5612d7b90280bdff 213 SUPERFAMILY SSF52499 4 208 2.22E-53 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS09475 511869f621bc78ff5612d7b90280bdff 213 PANTHER PTHR11080 5 210 2.4E-71 T 22-04-2016 APECO1_RS09475 511869f621bc78ff5612d7b90280bdff 213 PANTHER PTHR11080:SF2 5 210 2.4E-71 T 22-04-2016 APECO1_RS09915 4c6c5e36bbf7d7afd68e4f4d18083e45 603 SUPERFAMILY SSF143975 1 418 9.15E-147 T 22-04-2016 APECO1_RS09915 4c6c5e36bbf7d7afd68e4f4d18083e45 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS09915 4c6c5e36bbf7d7afd68e4f4d18083e45 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 602 0.0 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 APECO1_RS09915 4c6c5e36bbf7d7afd68e4f4d18083e45 603 PANTHER PTHR21000 1 603 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS09915 4c6c5e36bbf7d7afd68e4f4d18083e45 603 PANTHER PTHR21000:SF9 1 603 0.0 T 22-04-2016 APECO1_RS09915 4c6c5e36bbf7d7afd68e4f4d18083e45 603 SUPERFAMILY SSF52016 419 600 1.02E-57 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS09915 4c6c5e36bbf7d7afd68e4f4d18083e45 603 Pfam PF00920 Dehydratase family 66 598 1.4E-158 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS09915 4c6c5e36bbf7d7afd68e4f4d18083e45 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APECO1_RS20430 47beff18562307003a618acb0786ca43 113 PANTHER PTHR37290:SF2 6 113 4.7E-61 T 22-04-2016 APECO1_RS20430 47beff18562307003a618acb0786ca43 113 PANTHER PTHR37290 6 113 4.7E-61 T 22-04-2016 APECO1_RS20430 47beff18562307003a618acb0786ca43 113 Pfam PF05360 yiaA/B two helix domain 6 50 3.3E-8 T 22-04-2016 IPR008024 YiaAB two helix APECO1_RS03320 fb5cad1bdf5c957282b288c2e61ba77c 148 SUPERFAMILY SSF46785 6 134 1.76E-45 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS03320 fb5cad1bdf5c957282b288c2e61ba77c 148 Pfam PF01475 Ferric uptake regulator family 10 130 6.9E-49 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APECO1_RS03320 fb5cad1bdf5c957282b288c2e61ba77c 148 PANTHER PTHR33202 7 142 5.6E-48 T 22-04-2016 APECO1_RS03320 fb5cad1bdf5c957282b288c2e61ba77c 148 Gene3D G3DSA:1.10.10.10 3 82 5.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 2.8E-53 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 Gene3D G3DSA:3.40.1030.10 75 337 5.5E-111 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 PANTHER PTHR10515 2 440 6.2E-228 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 PANTHER PTHR10515:SF0 2 440 6.2E-228 T 22-04-2016 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 Gene3D G3DSA:3.90.1170.30 338 432 7.1E-37 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 1.7E-237 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 SUPERFAMILY SSF47648 3 70 1.31E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 4.5E-25 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 SUPERFAMILY SSF52418 74 334 1.44E-88 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 54.474 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 SUPERFAMILY SSF54680 337 438 7.85E-33 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.8E-19 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.0E-170 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 Gene3D G3DSA:1.20.970.10 2 68 6.5E-30 T 22-04-2016 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 SMART SM00941 350 424 1.2E-29 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APECO1_RS25555 2b33fb9807b36d3ec10b6ba810a41d4a 440 PIRSF PIRSF000478 1 439 3.0E-154 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 APECO1_RS10140 c798b547d42ff4db2edd13f264dd2f64 328 PANTHER PTHR32196 20 328 6.7E-248 T 22-04-2016 APECO1_RS10140 c798b547d42ff4db2edd13f264dd2f64 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 315 1.1E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS10140 c798b547d42ff4db2edd13f264dd2f64 328 PANTHER PTHR32196:SF37 20 328 6.7E-248 T 22-04-2016 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 PANTHER PTHR23115:SF151 1 392 0.0 T 22-04-2016 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 7.1E-58 T 22-04-2016 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 SUPERFAMILY SSF52540 6 219 1.94E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:2.40.30.10 209 298 2.7E-37 T 22-04-2016 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 9.5E-34 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:3.40.50.300 3 208 5.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.8E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.284 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 SUPERFAMILY SSF50465 298 393 2.62E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 SUPERFAMILY SSF50447 205 301 1.34E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.5E-240 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 22-04-2016 APECO1_RS22710 b837a74346c7ec8a55808938a4589cfa 394 PANTHER PTHR23115 1 392 0.0 T 22-04-2016 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 SMART SM00448 7 120 3.8E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 PANTHER PTHR26402:SF555 7 209 9.8E-138 T 22-04-2016 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.4E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 SUPERFAMILY SSF52172 6 135 1.42E-36 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 Gene3D G3DSA:3.40.50.2300 5 154 5.4E-41 T 22-04-2016 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 Pfam PF00072 Response regulator receiver domain 9 120 8.2E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 PANTHER PTHR26402 7 209 9.8E-138 T 22-04-2016 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 SUPERFAMILY SSF46894 146 213 1.36E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 Gene3D G3DSA:1.10.10.10 155 214 1.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS06470 8f80a9379e52023221a7cf06252eb4cc 216 SMART SM00421 153 210 1.0E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 6.7E-41 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 1 121 1.3E-32 T 22-04-2016 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 249 366 4.9E-39 T 22-04-2016 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 1 121 5.84E-26 T 22-04-2016 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 125 244 5.5E-30 T 22-04-2016 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 Gene3D G3DSA:3.10.150.10 122 248 1.2E-38 T 22-04-2016 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 PANTHER PTHR30478 2 366 1.1E-152 T 22-04-2016 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 SMART SM00480 17 362 8.4E-176 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 7.9E-41 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.3E-45 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 PIRSF PIRSF000804 1 366 7.2E-119 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.0E-114 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS21145 b8c84d6f36a917c175c68a7edb9861d4 366 SUPERFAMILY SSF55979 245 366 6.77E-38 T 22-04-2016 APECO1_RS25295 1927195f460dd36e0982a354e0a42b80 108 PANTHER PTHR33516:SF2 1 84 2.8E-17 T 22-04-2016 APECO1_RS25295 1927195f460dd36e0982a354e0a42b80 108 Pfam PF01726 LexA DNA binding domain 1 65 2.9E-19 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 APECO1_RS25295 1927195f460dd36e0982a354e0a42b80 108 Gene3D G3DSA:1.10.10.10 1 68 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25295 1927195f460dd36e0982a354e0a42b80 108 SUPERFAMILY SSF46785 3 69 1.09E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25295 1927195f460dd36e0982a354e0a42b80 108 PANTHER PTHR33516 1 84 2.8E-17 T 22-04-2016 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 PANTHER PTHR11177:SF203 542 842 8.1E-64 T 22-04-2016 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 SUPERFAMILY SSF51055 436 492 2.88E-10 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 Pfam PF02839 Carbohydrate binding domain 438 487 1.2E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 Gene3D G3DSA:2.10.10.20 437 492 9.1E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 PANTHER PTHR11177 542 842 8.1E-64 T 22-04-2016 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 Gene3D G3DSA:3.20.20.80 589 844 1.7E-11 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 SUPERFAMILY SSF51445 584 856 7.1E-27 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 SMART SM00495 391 435 1.6E-6 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 SMART SM00495 205 253 8.4E-7 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 SMART SM00495 504 546 31.0 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 SMART SM00495 104 152 1.3E-6 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 SMART SM00495 1 49 1.7E-8 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 SMART SM00495 316 364 1.5E-7 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS19165 e6c7652c7ffe466baf8aa8a193b002c2 876 SMART SM00495 438 490 1.7E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 PANTHER PTHR24423 425 659 3.5E-49 T 22-04-2016 APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 663 8.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 SMART SM00387 558 664 3.2E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 Gene3D G3DSA:3.30.565.10 517 666 2.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 Pfam PF00512 His Kinase A (phospho-acceptor) domain 450 513 1.2E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 SMART SM00388 448 516 4.9E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 PANTHER PTHR24423:SF485 425 659 3.5E-49 T 22-04-2016 APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 SUPERFAMILY SSF55874 515 661 2.23E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 SMART SM00304 365 417 9.6E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS16945 b6325b7e118d679f617fd1b8e915f289 669 SUPERFAMILY SSF47384 444 512 3.14E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APECO1_RS09640 8d4a14881f5981beed9324c876cf2107 56 Gene3D G3DSA:3.40.718.10 6 56 7.7E-11 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS09640 8d4a14881f5981beed9324c876cf2107 56 SUPERFAMILY SSF53659 6 56 4.11E-10 T 22-04-2016 APECO1_RS09640 8d4a14881f5981beed9324c876cf2107 56 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 56 1.6E-4 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APECO1_RS09640 8d4a14881f5981beed9324c876cf2107 56 PANTHER PTHR11835:SF37 6 56 2.3E-19 T 22-04-2016 APECO1_RS09640 8d4a14881f5981beed9324c876cf2107 56 PANTHER PTHR11835 6 56 2.3E-19 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APECO1_RS25205 8eb7c1d96285659ed5cd0a7977b82785 137 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 5.0E-46 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS25205 8eb7c1d96285659ed5cd0a7977b82785 137 Gene3D G3DSA:3.40.50.10220 26 136 7.9E-45 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS25205 8eb7c1d96285659ed5cd0a7977b82785 137 Pfam PF03603 DNA polymerase III psi subunit 3 127 5.8E-44 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS25205 8eb7c1d96285659ed5cd0a7977b82785 137 PIRSF PIRSF029225 2 131 2.8E-49 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS25205 8eb7c1d96285659ed5cd0a7977b82785 137 SUPERFAMILY SSF102220 27 135 2.88E-34 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS25205 8eb7c1d96285659ed5cd0a7977b82785 137 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 1 125 8.1E-62 T 22-04-2016 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS09780 50742b438fde18c9298f5c246d366197 79 Pfam PF13996 YobH-like protein 2 71 2.4E-38 T 22-04-2016 IPR025611 YobH-like protein APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.4E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.4E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.4E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 Gene3D G3DSA:3.40.710.10 27 283 1.7E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 SUPERFAMILY SSF56601 14 285 7.11E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 SMART SM00936 285 376 1.3E-34 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 PANTHER PTHR21581:SF4 15 400 0.0 T 22-04-2016 APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 SUPERFAMILY SSF69189 285 378 7.46E-25 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 Gene3D G3DSA:2.60.410.10 285 376 2.9E-30 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 266 3.5E-102 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 PANTHER PTHR21581 15 400 0.0 T 22-04-2016 APECO1_RS04075 69ab7a4590879c7171bf86b3705ad458 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 8.5E-24 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS02140 1e1c1e6bfb6fafcc8cf86129914435c6 299 PANTHER PTHR12001:SF23 1 294 4.7E-110 T 22-04-2016 APECO1_RS02140 1e1c1e6bfb6fafcc8cf86129914435c6 299 SUPERFAMILY SSF48576 1 280 2.47E-87 T 22-04-2016 IPR008949 Isoprenoid synthase domain APECO1_RS02140 1e1c1e6bfb6fafcc8cf86129914435c6 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APECO1_RS02140 1e1c1e6bfb6fafcc8cf86129914435c6 299 Pfam PF00348 Polyprenyl synthetase 34 271 5.7E-56 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APECO1_RS02140 1e1c1e6bfb6fafcc8cf86129914435c6 299 PANTHER PTHR12001 1 294 4.7E-110 T 22-04-2016 IPR017446 Polyprenyl synthetase-related APECO1_RS02140 1e1c1e6bfb6fafcc8cf86129914435c6 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APECO1_RS02140 1e1c1e6bfb6fafcc8cf86129914435c6 299 Gene3D G3DSA:1.10.600.10 2 295 2.1E-90 T 22-04-2016 IPR008949 Isoprenoid synthase domain APECO1_RS12525 173ccc60ceb6cede0fb80100fefba657 429 Pfam PF07690 Major Facilitator Superfamily 23 381 3.0E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS12525 173ccc60ceb6cede0fb80100fefba657 429 PANTHER PTHR11662 7 425 5.1E-157 T 22-04-2016 APECO1_RS12525 173ccc60ceb6cede0fb80100fefba657 429 PANTHER PTHR11662:SF3 7 425 5.1E-157 T 22-04-2016 APECO1_RS12525 173ccc60ceb6cede0fb80100fefba657 429 Gene3D G3DSA:1.20.1250.20 231 416 8.5E-16 T 22-04-2016 APECO1_RS12525 173ccc60ceb6cede0fb80100fefba657 429 SUPERFAMILY SSF103473 9 417 1.31E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS12525 173ccc60ceb6cede0fb80100fefba657 429 Gene3D G3DSA:1.20.1250.20 14 212 1.9E-40 T 22-04-2016 APECO1_RS19195 59e6bec967a5efa3ac610513705f3fc0 119 PANTHER PTHR38780:SF1 1 119 5.1E-59 T 22-04-2016 APECO1_RS19195 59e6bec967a5efa3ac610513705f3fc0 119 Pfam PF02635 DsrE/DsrF-like family 2 119 2.0E-23 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APECO1_RS19195 59e6bec967a5efa3ac610513705f3fc0 119 PANTHER PTHR38780 1 119 5.1E-59 T 22-04-2016 APECO1_RS19195 59e6bec967a5efa3ac610513705f3fc0 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 2.0E-45 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF APECO1_RS19195 59e6bec967a5efa3ac610513705f3fc0 119 Gene3D G3DSA:3.40.1260.10 1 119 1.0E-47 T 22-04-2016 IPR027396 DsrEFH-like APECO1_RS19195 59e6bec967a5efa3ac610513705f3fc0 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 35.625 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF APECO1_RS19195 59e6bec967a5efa3ac610513705f3fc0 119 SUPERFAMILY SSF75169 1 119 3.27E-34 T 22-04-2016 IPR027396 DsrEFH-like APECO1_RS15205 4c50622d1f0d6d6c99358eb8ce0a5eb9 114 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 4.8E-61 T 22-04-2016 IPR018994 Protein of unknown function DUF2002 APECO1_RS15205 4c50622d1f0d6d6c99358eb8ce0a5eb9 114 SUPERFAMILY SSF159894 1 111 2.25E-59 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82714 182 272 1.7E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:3.30.70.1430 39 139 2.5E-34 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PANTHER PTHR32063:SF32 1 1037 0.0 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:1.20.1640.10 292 506 7.1E-57 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82714 723 809 5.36E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82693 39 132 4.53E-27 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82866 296 497 1.44E-47 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:3.30.2090.10 181 275 3.6E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:3.30.2090.10 722 811 1.4E-28 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:1.10.3850.10 815 1028 7.0E-57 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PANTHER PTHR32063 1 1037 0.0 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.0E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 Gene3D G3DSA:3.30.70.1430 568 672 5.8E-34 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82866 807 1030 7.59E-45 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82693 138 182 1.46E-24 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82693 274 330 1.46E-24 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 SUPERFAMILY SSF82693 566 672 7.32E-29 T 22-04-2016 APECO1_RS13815 f67b0ebceed9b1606075177b988d8230 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.5E-20 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 PANTHER PTHR33910:SF1 1 126 2.3E-35 T 22-04-2016 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 Gene3D G3DSA:1.20.5.1030 64 123 3.1E-25 T 22-04-2016 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.0E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.0E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.0E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.0E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 PANTHER PTHR33910 1 126 2.3E-35 T 22-04-2016 APECO1_RS22715 d7fac8c3b32b51f5695354313167117d 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE APECO1_RS05375 77cdabfde36385fd29abaf433e9fab34 402 Gene3D G3DSA:1.20.1250.20 206 386 1.2E-16 T 22-04-2016 APECO1_RS05375 77cdabfde36385fd29abaf433e9fab34 402 Gene3D G3DSA:1.20.1250.20 17 186 2.1E-25 T 22-04-2016 APECO1_RS05375 77cdabfde36385fd29abaf433e9fab34 402 PANTHER PTHR23517:SF2 1 400 6.1E-192 T 22-04-2016 APECO1_RS05375 77cdabfde36385fd29abaf433e9fab34 402 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 42.527 T 22-04-2016 IPR022855 Multidrug resistance protein MdtH APECO1_RS05375 77cdabfde36385fd29abaf433e9fab34 402 PANTHER PTHR23517 1 400 6.1E-192 T 22-04-2016 APECO1_RS05375 77cdabfde36385fd29abaf433e9fab34 402 Pfam PF07690 Major Facilitator Superfamily 20 239 7.5E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS05375 77cdabfde36385fd29abaf433e9fab34 402 SUPERFAMILY SSF103473 12 392 2.88E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS06675 bc5a7cacaf8bd5ab98be80105fa3f76d 62 Pfam PF05358 DicB protein 1 62 2.4E-41 T 22-04-2016 IPR008022 DicB APECO1_RS06675 bc5a7cacaf8bd5ab98be80105fa3f76d 62 ProDom PD053043 DIVISION CELL INHIBITION INHIBITOR ENCODED DICB PROPHAGE BY WITHIN CP- 1 62 1.0E-30 T 22-04-2016 IPR008022 DicB APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 Pfam PF00128 Alpha amylase, catalytic domain 226 595 2.2E-36 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PIRSF PIRSF036917 1 676 0.0 T 22-04-2016 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357 223 320 2.5E-128 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357 110 136 2.5E-128 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357 434 672 2.5E-128 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357 349 410 2.5E-128 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357 163 207 2.5E-128 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 SMART SM00642 193 637 3.9E-84 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 Gene3D G3DSA:3.20.20.80 183 644 1.7E-86 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 SUPERFAMILY SSF51445 374 643 9.57E-73 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 SUPERFAMILY SSF51445 179 318 9.57E-73 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357:SF11 223 320 2.5E-128 T 22-04-2016 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357:SF11 110 136 2.5E-128 T 22-04-2016 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357:SF11 434 672 2.5E-128 T 22-04-2016 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357:SF11 349 410 2.5E-128 T 22-04-2016 APECO1_RS20470 f500ecc09f3e8b911b7639622142110f 676 PANTHER PTHR10357:SF11 163 207 2.5E-128 T 22-04-2016 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 Pfam PF02872 5'-nucleotidase, C-terminal domain 329 475 1.1E-35 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 ProSitePatterns PS00786 5'-nucleotidase signature 2. 103 114 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 Gene3D G3DSA:3.90.780.10 329 511 6.9E-48 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PRINTS PR01607 Apyrase family signature 450 469 4.9E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PRINTS PR01607 Apyrase family signature 380 403 4.9E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PRINTS PR01607 Apyrase family signature 264 284 4.9E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PRINTS PR01607 Apyrase family signature 236 259 4.9E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PRINTS PR01607 Apyrase family signature 23 41 4.9E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PRINTS PR01607 Apyrase family signature 201 218 4.9E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PANTHER PTHR11575 4 218 4.1E-160 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PANTHER PTHR11575 235 515 4.1E-160 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 SUPERFAMILY SSF55816 328 512 1.83E-50 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 Gene3D G3DSA:3.60.21.10 24 327 1.5E-78 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PANTHER PTHR11575:SF27 4 218 4.1E-160 T 22-04-2016 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 PANTHER PTHR11575:SF27 235 515 4.1E-160 T 22-04-2016 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 Pfam PF00149 Calcineurin-like phosphoesterase 26 253 1.1E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS22480 e1e46fa846769cf088d6a8ef1e08b60c 516 SUPERFAMILY SSF56300 24 327 2.64E-74 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS16740 4648458cb447b03a1260adeae58ab5fa 378 Gene3D G3DSA:3.80.30.20 7 239 6.9E-29 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APECO1_RS16740 4648458cb447b03a1260adeae58ab5fa 378 SUPERFAMILY SSF102114 5 376 5.89E-108 T 22-04-2016 APECO1_RS16740 4648458cb447b03a1260adeae58ab5fa 378 Pfam PF04055 Radical SAM superfamily 11 177 1.5E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS16740 4648458cb447b03a1260adeae58ab5fa 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 7.9E-142 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- APECO1_RS16740 4648458cb447b03a1260adeae58ab5fa 378 PANTHER PTHR13932 5 378 6.9E-232 T 22-04-2016 APECO1_RS16740 4648458cb447b03a1260adeae58ab5fa 378 SMART SM00729 6 223 1.5E-56 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APECO1_RS16740 4648458cb447b03a1260adeae58ab5fa 378 PANTHER PTHR13932:SF7 5 378 6.9E-232 T 22-04-2016 APECO1_RS16740 4648458cb447b03a1260adeae58ab5fa 378 Pfam PF06969 HemN C-terminal domain 304 364 4.3E-9 T 22-04-2016 IPR010723 HemN, C-terminal APECO1_RS00750 ead14bc2e97c4c66e63c5091f2fe9847 188 Gene3D G3DSA:2.60.40.1090 27 188 4.2E-17 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS00750 ead14bc2e97c4c66e63c5091f2fe9847 188 Pfam PF00419 Fimbrial protein 29 188 1.8E-16 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS00750 ead14bc2e97c4c66e63c5091f2fe9847 188 SUPERFAMILY SSF49401 27 188 2.49E-13 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS06555 8d2360447e17d2c6be00893f02fc1c4c 205 PIRSF PIRSF035805 1 199 2.5E-57 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APECO1_RS06555 8d2360447e17d2c6be00893f02fc1c4c 205 Pfam PF00265 Thymidine kinase 2 186 1.2E-67 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APECO1_RS06555 8d2360447e17d2c6be00893f02fc1c4c 205 SUPERFAMILY SSF57716 142 189 1.57E-16 T 22-04-2016 APECO1_RS06555 8d2360447e17d2c6be00893f02fc1c4c 205 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.213 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APECO1_RS06555 8d2360447e17d2c6be00893f02fc1c4c 205 PANTHER PTHR11441 1 202 5.2E-86 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APECO1_RS06555 8d2360447e17d2c6be00893f02fc1c4c 205 SUPERFAMILY SSF52540 1 141 1.44E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06555 8d2360447e17d2c6be00893f02fc1c4c 205 Gene3D G3DSA:3.30.60.20 142 189 3.5E-20 T 22-04-2016 APECO1_RS06555 8d2360447e17d2c6be00893f02fc1c4c 205 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APECO1_RS06825 d5e84c8af3ab7247ee3f91d02350680c 182 SUPERFAMILY SSF46955 2 63 1.54E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS06825 d5e84c8af3ab7247ee3f91d02350680c 182 Pfam PF07471 Phage DNA packaging protein Nu1 1 163 1.7E-73 T 22-04-2016 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit APECO1_RS06825 d5e84c8af3ab7247ee3f91d02350680c 182 Gene3D G3DSA:1.10.10.10 1 67 1.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS22360 37cc44e310531f01ba4bb7cee5d65c85 255 Pfam PF00121 Triosephosphate isomerase 5 246 2.5E-93 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APECO1_RS22360 37cc44e310531f01ba4bb7cee5d65c85 255 Gene3D G3DSA:3.20.20.70 1 250 2.0E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS22360 37cc44e310531f01ba4bb7cee5d65c85 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.72 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APECO1_RS22360 37cc44e310531f01ba4bb7cee5d65c85 255 SUPERFAMILY SSF51351 1 248 3.4E-91 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APECO1_RS22360 37cc44e310531f01ba4bb7cee5d65c85 255 PANTHER PTHR21139 1 255 7.2E-133 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APECO1_RS22360 37cc44e310531f01ba4bb7cee5d65c85 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.5E-108 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APECO1_RS22360 37cc44e310531f01ba4bb7cee5d65c85 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 PANTHER PTHR11911:SF6 1 281 4.8E-251 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 PANTHER PTHR11911:SF6 299 485 4.8E-251 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.253 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 Gene3D G3DSA:3.20.20.70 2 485 1.0E-193 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 SUPERFAMILY SSF51412 217 477 1.83E-127 T 22-04-2016 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 SUPERFAMILY SSF51412 1 90 1.83E-127 T 22-04-2016 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 SUPERFAMILY SSF54631 94 203 1.64E-24 T 22-04-2016 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 Pfam PF00571 CBS domain 153 202 1.7E-4 T 22-04-2016 IPR000644 CBS domain APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 Pfam PF00571 CBS domain 95 140 5.3E-9 T 22-04-2016 IPR000644 CBS domain APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 SMART SM00116 96 144 2.9E-11 T 22-04-2016 IPR000644 CBS domain APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 SMART SM00116 158 206 1.9E-8 T 22-04-2016 IPR000644 CBS domain APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 PIRSF PIRSF000130 1 487 5.8E-197 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 PANTHER PTHR11911 1 281 4.8E-251 T 22-04-2016 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 PANTHER PTHR11911 299 485 4.8E-251 T 22-04-2016 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.7E-161 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 SMART SM01240 7 473 0.0 T 22-04-2016 APECO1_RS14225 011b6d907ef640a7e3007e1a2a815315 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.2E-200 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.2E-75 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 5 110 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 191 285 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:1.10.10.160 114 190 1.0E-26 T 22-04-2016 IPR013986 DExx box DNA helicase domain APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:1.10.486.10 388 541 1.5E-52 T 22-04-2016 APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 286 387 5.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 Gene3D G3DSA:3.40.50.300 552 642 5.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 PANTHER PTHR11070:SF7 6 718 5.4E-264 T 22-04-2016 APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 SUPERFAMILY SSF52540 7 642 1.72E-182 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 6.8E-76 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APECO1_RS21705 2d8cb0d1593dada736404297fa854c25 720 PANTHER PTHR11070 6 718 5.4E-264 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 6.5E-49 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 6.5E-49 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 6.5E-49 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 6.5E-49 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 6.5E-49 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 6.5E-49 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 35.782 T 22-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 PANTHER PTHR19139:SF103 1 231 1.3E-75 T 22-04-2016 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 1.2E-63 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 SUPERFAMILY SSF81338 2 228 3.01E-67 T 22-04-2016 IPR023271 Aquaporin-like APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 Gene3D G3DSA:1.20.1080.10 2 229 8.6E-68 T 22-04-2016 IPR023271 Aquaporin-like APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 PANTHER PTHR19139 1 231 1.3E-75 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS04260 29786e341a0244c771452f53e29cfce5 231 Pfam PF00230 Major intrinsic protein 2 223 2.2E-49 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS18870 340254478fbbd9a6041665d5b371c600 85 SUPERFAMILY SSF160272 2 84 1.83E-31 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 APECO1_RS18870 340254478fbbd9a6041665d5b371c600 85 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 3.9E-31 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 APECO1_RS18870 340254478fbbd9a6041665d5b371c600 85 Gene3D G3DSA:3.30.160.140 2 84 5.3E-39 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 APECO1_RS03475 753b0fd70db6b7058990018f6ede9e17 115 Gene3D G3DSA:1.20.1300.10 1 115 4.7E-40 T 22-04-2016 APECO1_RS03475 753b0fd70db6b7058990018f6ede9e17 115 PANTHER PTHR38689:SF1 2 115 3.4E-61 T 22-04-2016 APECO1_RS03475 753b0fd70db6b7058990018f6ede9e17 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 3.2E-37 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 APECO1_RS03475 753b0fd70db6b7058990018f6ede9e17 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 105 2.0E-6 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 APECO1_RS03475 753b0fd70db6b7058990018f6ede9e17 115 PIRSF PIRSF000169 1 115 3.9E-42 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 APECO1_RS03475 753b0fd70db6b7058990018f6ede9e17 115 SUPERFAMILY SSF81343 5 115 1.96E-31 T 22-04-2016 APECO1_RS03475 753b0fd70db6b7058990018f6ede9e17 115 PANTHER PTHR38689 2 115 3.4E-61 T 22-04-2016 APECO1_RS22770 3052cd3c70f30d325354fbe779df3b03 251 Gene3D G3DSA:3.40.50.720 3 244 3.4E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS22770 3052cd3c70f30d325354fbe779df3b03 251 PANTHER PTHR10953:SF158 1 246 1.5E-147 T 22-04-2016 APECO1_RS22770 3052cd3c70f30d325354fbe779df3b03 251 Pfam PF00899 ThiF family 9 240 2.1E-65 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APECO1_RS22770 3052cd3c70f30d325354fbe779df3b03 251 SUPERFAMILY SSF69572 2 245 1.57E-81 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APECO1_RS22770 3052cd3c70f30d325354fbe779df3b03 251 PANTHER PTHR10953 1 246 1.5E-147 T 22-04-2016 APECO1_RS22770 3052cd3c70f30d325354fbe779df3b03 251 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 8 209 1.4E-86 T 22-04-2016 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 PANTHER PTHR10169:SF30 6 520 0.0 T 22-04-2016 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 1.3E-134 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 SUPERFAMILY SSF56719 28 479 3.14E-154 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 630 5.3E-4 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 675 2.8E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 Gene3D G3DSA:2.120.10.90 493 725 5.8E-27 T 22-04-2016 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 PANTHER PTHR10169 6 520 0.0 T 22-04-2016 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 Gene3D G3DSA:3.30.1360.40 235 328 8.1E-25 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 SUPERFAMILY SSF101904 494 736 2.09E-50 T 22-04-2016 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 Gene3D G3DSA:3.90.199.10 27 234 1.3E-105 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 Gene3D G3DSA:3.90.199.10 330 395 1.3E-105 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 SMART SM00434 8 458 4.8E-241 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.356 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APECO1_RS17555 22b4e76e138093c4dd5320ab5c66db33 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 738 0.0 T 22-04-2016 APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 SUPERFAMILY SSF53697 10 255 9.34E-53 T 22-04-2016 APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 SUPERFAMILY SSF54631 260 317 3.88E-8 T 22-04-2016 APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 Pfam PF00571 CBS domain 282 315 5.5E-4 T 22-04-2016 IPR000644 CBS domain APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 Pfam PF00571 CBS domain 199 256 8.3E-4 T 22-04-2016 IPR000644 CBS domain APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 Gene3D G3DSA:3.10.580.10 193 317 1.4E-29 T 22-04-2016 APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 1.8E-134 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 PANTHER PTHR11911:SF98 35 321 5.7E-110 T 22-04-2016 APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 PIRSF PIRSF004692 1 321 1.0E-121 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 Gene3D G3DSA:3.40.50.10490 23 192 1.0E-40 T 22-04-2016 APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 PANTHER PTHR11911 35 321 5.7E-110 T 22-04-2016 APECO1_RS15415 0001315b8bcda0cfacb1a2df673341d4 321 Pfam PF01380 SIS domain 39 169 2.1E-29 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS16330 08d8d01bd920dedb502f162d53bc86b4 541 Gene3D G3DSA:2.40.50.100 433 481 6.1E-6 T 22-04-2016 APECO1_RS16330 08d8d01bd920dedb502f162d53bc86b4 541 Pfam PF13478 XdhC Rossmann domain 106 247 2.9E-31 T 22-04-2016 IPR027051 XdhC Rossmann domain APECO1_RS16330 08d8d01bd920dedb502f162d53bc86b4 541 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 271 526 4.9E-126 T 22-04-2016 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family APECO1_RS16330 08d8d01bd920dedb502f162d53bc86b4 541 PANTHER PTHR30388 1 287 5.6E-91 T 22-04-2016 APECO1_RS16330 08d8d01bd920dedb502f162d53bc86b4 541 PANTHER PTHR30388:SF4 1 287 5.6E-91 T 22-04-2016 APECO1_RS16330 08d8d01bd920dedb502f162d53bc86b4 541 Pfam PF02625 XdhC and CoxI family 12 73 2.8E-16 T 22-04-2016 IPR003777 XdhC- CoxI APECO1_RS16330 08d8d01bd920dedb502f162d53bc86b4 541 SUPERFAMILY SSF53187 407 489 2.09E-6 T 22-04-2016 APECO1_RS04830 043cced152504716b33b2b2e5cc4ae26 417 PANTHER PTHR30462 1 417 2.0E-280 T 22-04-2016 APECO1_RS04830 043cced152504716b33b2b2e5cc4ae26 417 Pfam PF04403 Paraquat-inducible protein A 49 200 2.4E-40 T 22-04-2016 IPR007498 Paraquat-inducible protein A APECO1_RS04830 043cced152504716b33b2b2e5cc4ae26 417 Pfam PF04403 Paraquat-inducible protein A 253 408 6.6E-54 T 22-04-2016 IPR007498 Paraquat-inducible protein A APECO1_RS04830 043cced152504716b33b2b2e5cc4ae26 417 PANTHER PTHR30462:SF3 1 417 2.0E-280 T 22-04-2016 APECO1_RS04830 043cced152504716b33b2b2e5cc4ae26 417 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 1.4E-199 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 APECO1_RS16830 0bd7c4210486ee9c24a02427718ddcc1 248 Gene3D G3DSA:3.40.50.300 53 228 6.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16830 0bd7c4210486ee9c24a02427718ddcc1 248 Pfam PF01695 IstB-like ATP binding protein 53 228 1.3E-57 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APECO1_RS16830 0bd7c4210486ee9c24a02427718ddcc1 248 SUPERFAMILY SSF52540 68 240 7.76E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16830 0bd7c4210486ee9c24a02427718ddcc1 248 PANTHER PTHR30050 4 238 3.2E-57 T 22-04-2016 APECO1_RS16830 0bd7c4210486ee9c24a02427718ddcc1 248 PANTHER PTHR30050:SF6 4 238 3.2E-57 T 22-04-2016 APECO1_RS16830 0bd7c4210486ee9c24a02427718ddcc1 248 Pfam PF08483 IstB-like ATP binding N-terminal 23 51 1.6E-8 T 22-04-2016 IPR013690 IstB-like ATP binding N-terminal APECO1_RS16830 0bd7c4210486ee9c24a02427718ddcc1 248 SMART SM00382 97 230 0.0028 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS16830 0bd7c4210486ee9c24a02427718ddcc1 248 PIRSF PIRSF003073 1 247 5.1E-68 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 Pfam PF00267 Gram-negative porin 28 362 1.2E-138 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PANTHER PTHR34501:SF6 3 362 4.0E-266 T 22-04-2016 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 2.0E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 239 256 2.0E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 157 179 2.0E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 273 292 2.0E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 57 75 2.0E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00183 E.coli/Salmonella-type porin signature 103 125 2.0E-67 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 Gene3D G3DSA:2.40.160.10 23 362 7.4E-106 T 22-04-2016 IPR023614 Porin domain APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 SUPERFAMILY SSF56935 23 362 6.41E-81 T 22-04-2016 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 58 69 4.0E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 103 113 4.0E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 317 334 4.0E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 233 245 4.0E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 159 170 4.0E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 317 333 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site APECO1_RS04760 84a45ef07a91478e32f42cd2226ab1cb 362 PANTHER PTHR34501 3 362 4.0E-266 T 22-04-2016 APECO1_RS26305 e6b6bf8b07b14d10f161fa1f7722805e 29 Gene3D G3DSA:3.40.50.1440 1 29 9.9E-5 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 Pfam PF00691 OmpA family 72 167 4.4E-22 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 173 1.1E-46 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PRINTS PR01021 OMPA domain signature 103 118 2.4E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PRINTS PR01021 OMPA domain signature 118 134 2.4E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PRINTS PR01021 OMPA domain signature 73 95 2.4E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 Gene3D G3DSA:3.30.1330.60 68 172 3.7E-35 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PANTHER PTHR30128 10 173 3.4E-69 T 22-04-2016 APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 SUPERFAMILY SSF103088 60 172 7.85E-35 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS03570 4d17d3d2b7fa4e0ac10650da1a70d3c4 173 PANTHER PTHR30128:SF18 10 173 3.4E-69 T 22-04-2016 APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 SMART SM00490 255 336 5.4E-28 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 SUPERFAMILY SSF52540 72 350 8.49E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 Gene3D G3DSA:3.40.50.300 214 367 7.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 PANTHER PTHR24031:SF180 1 438 5.7E-262 T 22-04-2016 APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 Pfam PF00270 DEAD/DEAH box helicase 27 191 2.9E-43 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 PANTHER PTHR24031 1 438 5.7E-262 T 22-04-2016 APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 71.812 T 22-04-2016 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 SMART SM00487 22 219 1.7E-56 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 Pfam PF03880 DbpA RNA binding domain 384 454 1.3E-20 T 22-04-2016 IPR005580 DbpA, RNA-binding domain APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 Pfam PF00271 Helicase conserved C-terminal domain 231 336 1.3E-26 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS07435 a01846e6752777cebbfdb56c8fa9c3a7 457 Gene3D G3DSA:3.40.50.300 2 209 3.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24720 4c7f4d37ee5f227c696235bc2b2d9035 147 PANTHER PTHR38767 2 146 2.0E-67 T 22-04-2016 APECO1_RS24720 4c7f4d37ee5f227c696235bc2b2d9035 147 Gene3D G3DSA:3.40.50.10110 1 144 1.1E-52 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APECO1_RS24720 4c7f4d37ee5f227c696235bc2b2d9035 147 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 4.1E-39 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APECO1_RS24720 4c7f4d37ee5f227c696235bc2b2d9035 147 SUPERFAMILY SSF102400 1 145 3.53E-47 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APECO1_RS13175 d330249f5b4fd503add035f600a9c370 62 ProDom PD019190 NINH READING ECS2976 ECS1202 H0110 DNA-BINDING GENE GP68 FRAME BACTERIOPHAGE 11 57 1.0E-20 T 22-04-2016 IPR010454 Bacteriophage NinH APECO1_RS13175 d330249f5b4fd503add035f600a9c370 62 Gene3D G3DSA:1.10.10.60 6 33 8.5E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS13175 d330249f5b4fd503add035f600a9c370 62 Pfam PF06322 Phage NinH protein 1 60 1.2E-29 T 22-04-2016 IPR010454 Bacteriophage NinH APECO1_RS11670 427ebb3926d221769023edc1260a7bf6 74 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 15 65 0.009 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 APECO1_RS11670 427ebb3926d221769023edc1260a7bf6 74 Pfam PF10809 Protein of unknown function (DUF2732) 11 65 8.4E-18 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 APECO1_RS02310 58f87b10dd216840bd2e243160152c81 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 7 86 2.0E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APECO1_RS02310 58f87b10dd216840bd2e243160152c81 103 PANTHER PTHR10815:SF2 1 102 6.7E-54 T 22-04-2016 APECO1_RS02310 58f87b10dd216840bd2e243160152c81 103 Gene3D G3DSA:1.10.10.10 5 89 1.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS02310 58f87b10dd216840bd2e243160152c81 103 PANTHER PTHR10815 1 102 6.7E-54 T 22-04-2016 APECO1_RS02310 58f87b10dd216840bd2e243160152c81 103 SUPERFAMILY SSF46767 5 87 1.28E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APECO1_RS02310 58f87b10dd216840bd2e243160152c81 103 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 6 76 3.6E-15 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APECO1_RS12340 fea7e83a78333669180152900abb984d 548 PANTHER PTHR13847:SF214 27 545 1.1E-234 T 22-04-2016 APECO1_RS12340 fea7e83a78333669180152900abb984d 548 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 32 516 3.4E-216 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APECO1_RS12340 fea7e83a78333669180152900abb984d 548 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 28 518 55.45 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APECO1_RS12340 fea7e83a78333669180152900abb984d 548 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 31 518 6.9E-240 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APECO1_RS12340 fea7e83a78333669180152900abb984d 548 SUPERFAMILY SSF51905 28 91 5.18E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12340 fea7e83a78333669180152900abb984d 548 SUPERFAMILY SSF51905 144 358 5.18E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12340 fea7e83a78333669180152900abb984d 548 PANTHER PTHR13847 27 545 1.1E-234 T 22-04-2016 APECO1_RS12340 fea7e83a78333669180152900abb984d 548 Gene3D G3DSA:3.50.50.60 30 98 4.9E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12340 fea7e83a78333669180152900abb984d 548 Gene3D G3DSA:3.50.50.60 173 358 4.9E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS23715 c6b09b2701ef05d016e7112936592a38 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 9 74 4.0E-33 T 22-04-2016 IPR009253 Protein of unknown function DUF905 APECO1_RS23715 c6b09b2701ef05d016e7112936592a38 77 SUPERFAMILY SSF54786 12 77 3.92E-31 T 22-04-2016 APECO1_RS23715 c6b09b2701ef05d016e7112936592a38 77 Gene3D G3DSA:3.30.160.130 6 77 2.1E-39 T 22-04-2016 APECO1_RS23715 c6b09b2701ef05d016e7112936592a38 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 8 74 1.4E-30 T 22-04-2016 IPR009253 Protein of unknown function DUF905 APECO1_RS01010 084b0081f7a78ca3494cebb1dc38dbd8 140 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APECO1_RS01010 084b0081f7a78ca3494cebb1dc38dbd8 140 SUPERFAMILY SSF75620 7 109 1.14E-13 T 22-04-2016 APECO1_RS01010 084b0081f7a78ca3494cebb1dc38dbd8 140 PANTHER PTHR11075 10 139 3.7E-41 T 22-04-2016 APECO1_RS01010 084b0081f7a78ca3494cebb1dc38dbd8 140 Gene3D G3DSA:3.30.160.200 3 107 3.0E-33 T 22-04-2016 APECO1_RS01010 084b0081f7a78ca3494cebb1dc38dbd8 140 Pfam PF00472 RF-1 domain 6 132 6.9E-27 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APECO1_RS04845 d4cde8ccefd4aac4b796529242bb3092 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.965 T 22-04-2016 IPR007040 Ribosome modulation factor APECO1_RS04845 d4cde8ccefd4aac4b796529242bb3092 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 7.0E-26 T 22-04-2016 IPR007040 Ribosome modulation factor APECO1_RS04845 d4cde8ccefd4aac4b796529242bb3092 55 Pfam PF04957 Ribosome modulation factor 1 52 1.3E-30 T 22-04-2016 IPR007040 Ribosome modulation factor APECO1_RS04845 d4cde8ccefd4aac4b796529242bb3092 55 Gene3D G3DSA:1.10.10.620 1 51 5.2E-28 T 22-04-2016 IPR023200 Ribosome modulation factor-like domain APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 Pfam PF00797 N-acetyltransferase 22 256 2.4E-86 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 SUPERFAMILY SSF54001 2 269 2.62E-88 T 22-04-2016 APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 PANTHER PTHR11786 1 256 6.1E-79 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 Gene3D G3DSA:3.30.2140.10 3 126 1.3E-38 T 22-04-2016 APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 Gene3D G3DSA:3.30.2140.10 182 259 2.7E-14 T 22-04-2016 APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 PANTHER PTHR11786:SF0 1 256 6.1E-79 T 22-04-2016 APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 9.7E-9 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 9.7E-9 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 9.7E-9 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APECO1_RS08115 7391a35de86112081b1e9ee1b34b78d7 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 9.7E-9 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PANTHER PTHR30009 1 535 0.0 T 22-04-2016 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PANTHER PTHR30009:SF9 1 535 0.0 T 22-04-2016 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 383 526 2.2E-37 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 284 387 5.3E-23 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 Pfam PF01578 Cytochrome C assembly protein 55 262 1.7E-49 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 339 351 7.3E-41 T 22-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 284 299 7.3E-41 T 22-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 522 535 7.3E-41 T 22-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 305 323 7.3E-41 T 22-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 409 428 7.3E-41 T 22-04-2016 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 19 374 4.2E-182 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 260 276 1.5E-72 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 176 202 1.5E-72 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 46 72 1.5E-72 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 98 115 1.5E-72 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 276 295 1.5E-72 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 230 1.5E-72 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 240 260 1.5E-72 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS23310 085a75e4dc3cc160f0af22629b6c6620 535 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 125 147 1.5E-72 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS19930 627bd72e4f2907f9b384c73e855b52fc 268 SMART SM00382 37 229 1.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS19930 627bd72e4f2907f9b384c73e855b52fc 268 Gene3D G3DSA:3.40.50.300 2 234 3.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19930 627bd72e4f2907f9b384c73e855b52fc 268 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 2 266 1.9E-136 T 22-04-2016 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 APECO1_RS19930 627bd72e4f2907f9b384c73e855b52fc 268 PANTHER PTHR24220 5 236 2.4E-180 T 22-04-2016 APECO1_RS19930 627bd72e4f2907f9b384c73e855b52fc 268 SUPERFAMILY SSF52540 4 237 4.31E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19930 627bd72e4f2907f9b384c73e855b52fc 268 PANTHER PTHR24220:SF570 5 236 2.4E-180 T 22-04-2016 APECO1_RS19930 627bd72e4f2907f9b384c73e855b52fc 268 Pfam PF00005 ABC transporter 28 179 2.1E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS19930 627bd72e4f2907f9b384c73e855b52fc 268 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS09075 99912a31488de1c86a985dc58d813717 421 PANTHER PTHR23514 1 417 0.0 T 22-04-2016 APECO1_RS09075 99912a31488de1c86a985dc58d813717 421 Gene3D G3DSA:1.20.1250.20 14 185 4.3E-17 T 22-04-2016 APECO1_RS09075 99912a31488de1c86a985dc58d813717 421 PANTHER PTHR23514:SF9 1 417 0.0 T 22-04-2016 APECO1_RS09075 99912a31488de1c86a985dc58d813717 421 Gene3D G3DSA:1.20.1250.20 218 388 1.0E-12 T 22-04-2016 APECO1_RS09075 99912a31488de1c86a985dc58d813717 421 SUPERFAMILY SSF103473 8 391 1.44E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS09075 99912a31488de1c86a985dc58d813717 421 Pfam PF07690 Major Facilitator Superfamily 18 356 1.5E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 PANTHER PTHR11019 3 107 5.4E-87 T 22-04-2016 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 PANTHER PTHR11019:SF133 3 107 5.4E-87 T 22-04-2016 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 Gene3D G3DSA:1.10.10.60 1 57 1.4E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 Gene3D G3DSA:1.10.10.60 58 106 1.9E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 SUPERFAMILY SSF46689 57 106 1.12E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 Pfam PF12833 Helix-turn-helix domain 27 106 6.0E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 SMART SM00342 21 104 3.9E-34 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS23240 777af84098a120aab0a33c6cb4269d71 107 SUPERFAMILY SSF46689 4 56 2.09E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS17130 f206adfe9ea0e73b94c806b48c172ad1 558 Gene3D G3DSA:3.10.560.10 160 246 6.9E-9 T 22-04-2016 APECO1_RS17130 f206adfe9ea0e73b94c806b48c172ad1 558 Gene3D G3DSA:3.10.560.10 447 515 3.2E-10 T 22-04-2016 APECO1_RS17130 f206adfe9ea0e73b94c806b48c172ad1 558 Pfam PF10531 SLBB domain 461 507 2.2E-6 T 22-04-2016 IPR019554 Soluble ligand binding domain APECO1_RS17130 f206adfe9ea0e73b94c806b48c172ad1 558 PANTHER PTHR33619 87 550 1.0E-22 T 22-04-2016 APECO1_RS17130 f206adfe9ea0e73b94c806b48c172ad1 558 Gene3D G3DSA:3.30.1950.10 95 156 2.4E-12 T 22-04-2016 APECO1_RS17130 f206adfe9ea0e73b94c806b48c172ad1 558 Pfam PF02563 Polysaccharide biosynthesis/export protein 88 159 3.2E-14 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 Gene3D G3DSA:1.10.1040.10 283 486 3.6E-63 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 SUPERFAMILY SSF51735 14 281 3.07E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 PANTHER PTHR30562:SF6 17 485 1.7E-192 T 22-04-2016 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 SUPERFAMILY SSF48179 283 486 1.73E-54 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 Gene3D G3DSA:3.40.50.720 14 281 2.1E-101 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 6.7E-20 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 6.7E-20 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 6.7E-20 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 6.7E-20 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 453 7.5E-76 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 2.5E-39 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APECO1_RS17515 d85fb9d32350b2030e8217a1e636639e 490 PANTHER PTHR30562 17 485 1.7E-192 T 22-04-2016 APECO1_RS10645 75225203defcb5271db045c3585a060c 155 Pfam PF03245 Bacteriophage Rz lysis protein 30 153 5.1E-44 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 PANTHER PTHR11228:SF24 9 355 2.6E-118 T 22-04-2016 APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 158 371 7.0E-13 T 22-04-2016 APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 2 364 1.0E-150 T 22-04-2016 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 Pfam PF13353 4Fe-4S single cluster domain 11 128 1.4E-6 T 22-04-2016 APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 Pfam PF13186 Iron-sulfur cluster-binding domain 263 318 7.3E-5 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 SUPERFAMILY SSF102114 10 328 4.71E-43 T 22-04-2016 APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 265 345 2.1E-18 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 Pfam PF04055 Radical SAM superfamily 11 174 2.0E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 Gene3D G3DSA:3.20.20.70 11 334 6.9E-48 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS08255 b72c518ac919a74077b03b0b1b3ada47 385 PANTHER PTHR11228 9 355 2.6E-118 T 22-04-2016 APECO1_RS06650 9e0a29d1ca3e7823a95b7822f513fe07 212 Gene3D G3DSA:2.40.160.20 22 212 7.4E-73 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS06650 9e0a29d1ca3e7823a95b7822f513fe07 212 SUPERFAMILY SSF56925 28 212 1.07E-25 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS06650 9e0a29d1ca3e7823a95b7822f513fe07 212 PANTHER PTHR36920:SF1 1 212 3.7E-94 T 22-04-2016 APECO1_RS06650 9e0a29d1ca3e7823a95b7822f513fe07 212 Pfam PF03922 OmpW family 23 212 1.0E-72 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 APECO1_RS06650 9e0a29d1ca3e7823a95b7822f513fe07 212 PANTHER PTHR36920 1 212 3.7E-94 T 22-04-2016 APECO1_RS14965 ff6c3eba2e684a43807bbe7300f7f1d5 401 Pfam PF05065 Phage capsid family 115 398 2.8E-79 T 22-04-2016 IPR024455 Phage capsid APECO1_RS14965 ff6c3eba2e684a43807bbe7300f7f1d5 401 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 6 398 7.4E-116 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 APECO1_RS14965 ff6c3eba2e684a43807bbe7300f7f1d5 401 SUPERFAMILY SSF56563 107 400 6.15E-73 T 22-04-2016 APECO1_RS04205 70563109a451dc689384814cec661e65 242 PANTHER PTHR24220:SF495 4 241 1.1E-178 T 22-04-2016 APECO1_RS04205 70563109a451dc689384814cec661e65 242 SUPERFAMILY SSF52540 3 232 1.14E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04205 70563109a451dc689384814cec661e65 242 SMART SM00382 27 218 5.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04205 70563109a451dc689384814cec661e65 242 Pfam PF00005 ABC transporter 20 170 5.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04205 70563109a451dc689384814cec661e65 242 PIRSF PIRSF039085 1 242 8.2E-85 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APECO1_RS04205 70563109a451dc689384814cec661e65 242 Gene3D G3DSA:3.40.50.300 3 237 5.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04205 70563109a451dc689384814cec661e65 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04205 70563109a451dc689384814cec661e65 242 PANTHER PTHR24220 4 241 1.1E-178 T 22-04-2016 APECO1_RS19215 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Pfam PF04102 SlyX 6 72 4.7E-24 T 22-04-2016 IPR007236 SlyX APECO1_RS19215 00bc8ba7a63c1b8b0b2f031a6c496b49 72 PANTHER PTHR36508 1 72 7.3E-28 T 22-04-2016 APECO1_RS19215 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Gene3D G3DSA:1.20.5.300 2 52 2.3E-21 T 22-04-2016 APECO1_RS19215 00bc8ba7a63c1b8b0b2f031a6c496b49 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 17.586 T 22-04-2016 IPR007236 SlyX APECO1_RS05600 81594ba254ceb6c7292c9062bfd33740 179 PANTHER PTHR35603:SF2 1 177 4.9E-99 T 22-04-2016 APECO1_RS05600 81594ba254ceb6c7292c9062bfd33740 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 9.0E-12 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APECO1_RS05600 81594ba254ceb6c7292c9062bfd33740 179 PANTHER PTHR35603 1 177 4.9E-99 T 22-04-2016 APECO1_RS06325 d37d9f57f59671989fc5f635025defa6 270 Gene3D G3DSA:3.40.50.150 22 149 2.0E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06325 d37d9f57f59671989fc5f635025defa6 270 PANTHER PTHR10108:SF849 188 213 1.4E-20 T 22-04-2016 APECO1_RS06325 d37d9f57f59671989fc5f635025defa6 270 PANTHER PTHR10108:SF849 1 167 1.4E-20 T 22-04-2016 APECO1_RS06325 d37d9f57f59671989fc5f635025defa6 270 PANTHER PTHR10108 188 213 1.4E-20 T 22-04-2016 APECO1_RS06325 d37d9f57f59671989fc5f635025defa6 270 PANTHER PTHR10108 1 167 1.4E-20 T 22-04-2016 APECO1_RS06325 d37d9f57f59671989fc5f635025defa6 270 Pfam PF13847 Methyltransferase domain 60 148 2.0E-11 T 22-04-2016 IPR025714 Methyltransferase domain APECO1_RS06325 d37d9f57f59671989fc5f635025defa6 270 SUPERFAMILY SSF53335 19 226 2.67E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS09695 f97d034ad242225fd981caebaf749e6a 192 PANTHER PTHR12992 8 192 6.8E-58 T 22-04-2016 APECO1_RS09695 f97d034ad242225fd981caebaf749e6a 192 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 22-04-2016 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 APECO1_RS09695 f97d034ad242225fd981caebaf749e6a 192 SUPERFAMILY SSF55811 8 181 4.87E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS09695 f97d034ad242225fd981caebaf749e6a 192 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 1 190 49.972 T 22-04-2016 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 APECO1_RS09695 f97d034ad242225fd981caebaf749e6a 192 Pfam PF00293 NUDIX domain 30 143 9.3E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS09695 f97d034ad242225fd981caebaf749e6a 192 Gene3D G3DSA:3.90.79.10 25 185 7.2E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS08840 317b549c9b7ccceddb0cafb0ce0f1dd9 298 PANTHER PTHR11732 2 298 5.1E-169 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APECO1_RS08840 317b549c9b7ccceddb0cafb0ce0f1dd9 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 6.0E-6 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS08840 317b549c9b7ccceddb0cafb0ce0f1dd9 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 6.0E-6 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APECO1_RS08840 317b549c9b7ccceddb0cafb0ce0f1dd9 298 Gene3D G3DSA:3.20.20.100 2 292 1.7E-64 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS08840 317b549c9b7ccceddb0cafb0ce0f1dd9 298 Pfam PF00248 Aldo/keto reductase family 18 291 2.1E-57 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS08840 317b549c9b7ccceddb0cafb0ce0f1dd9 298 SUPERFAMILY SSF51430 4 295 1.7E-71 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APECO1_RS08840 317b549c9b7ccceddb0cafb0ce0f1dd9 298 PANTHER PTHR11732:SF10 2 298 5.1E-169 T 22-04-2016 APECO1_RS11175 8e0f0885613c67f6f00a275b9fe17da2 352 Pfam PF04632 Fusaric acid resistance protein family 21 316 3.2E-18 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APECO1_RS11175 8e0f0885613c67f6f00a275b9fe17da2 352 PANTHER PTHR30509 1 351 7.9E-282 T 22-04-2016 APECO1_RS11175 8e0f0885613c67f6f00a275b9fe17da2 352 PANTHER PTHR30509:SF5 1 351 7.9E-282 T 22-04-2016 APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 Pfam PF07729 FCD domain 89 208 8.5E-26 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 SMART SM00345 17 75 2.6E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 Gene3D G3DSA:1.20.120.530 79 221 2.1E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 SMART SM00895 85 209 2.4E-17 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 2.9E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.0E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.0E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 PANTHER PTHR11751 12 101 2.3E-48 T 22-04-2016 APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 Gene3D G3DSA:1.10.10.10 4 76 5.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 SUPERFAMILY SSF48008 87 216 4.18E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 SUPERFAMILY SSF46785 7 104 7.69E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08470 d8e4d217b3abef1f1d4da4fef71a7ef7 228 PANTHER PTHR11751:SF362 12 101 2.3E-48 T 22-04-2016 APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 Pfam PF12795 Mechanosensitive ion channel porin domain 31 256 7.8E-55 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 947 981 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 SUPERFAMILY SSF82689 985 1083 3.4E-16 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 Pfam PF00924 Mechanosensitive ion channel 875 1074 8.8E-54 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 Gene3D G3DSA:2.30.30.60 933 982 1.3E-16 T 22-04-2016 APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 Gene3D G3DSA:3.30.70.100 989 1072 6.6E-8 T 22-04-2016 APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 PANTHER PTHR30347:SF0 1 1103 0.0 T 22-04-2016 APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 PANTHER PTHR30347 1 1103 0.0 T 22-04-2016 APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 SUPERFAMILY SSF50182 918 983 7.52E-17 T 22-04-2016 IPR010920 LSM domain APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 814 7.0E-117 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 APECO1_RS24200 b016b648bf692c5c08c767865053f7b1 1107 SUPERFAMILY SSF82861 834 916 1.7E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APECO1_RS18245 3192abfa21a0abb3218b67c6a5156f37 335 PANTHER PTHR30137:SF2 1 334 4.4E-157 T 22-04-2016 APECO1_RS18245 3192abfa21a0abb3218b67c6a5156f37 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 327 4.8E-134 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 APECO1_RS18245 3192abfa21a0abb3218b67c6a5156f37 335 Gene3D G3DSA:3.20.20.30 8 326 4.7E-90 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS18245 3192abfa21a0abb3218b67c6a5156f37 335 SUPERFAMILY SSF51679 7 328 1.15E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS18245 3192abfa21a0abb3218b67c6a5156f37 335 Pfam PF00296 Luciferase-like monooxygenase 21 300 1.9E-34 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS18245 3192abfa21a0abb3218b67c6a5156f37 335 PANTHER PTHR30137 1 334 4.4E-157 T 22-04-2016 APECO1_RS06180 3779da21294481bd639c8d2e1fc7fedd 175 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 48 175 2.3E-23 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APECO1_RS06180 3779da21294481bd639c8d2e1fc7fedd 175 Pfam PF03797 Autotransporter beta-domain 48 161 6.4E-9 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS06180 3779da21294481bd639c8d2e1fc7fedd 175 Gene3D G3DSA:2.40.128.130 47 175 2.4E-27 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS06180 3779da21294481bd639c8d2e1fc7fedd 175 PANTHER PTHR12338:SF5 48 175 1.7E-33 T 22-04-2016 APECO1_RS06180 3779da21294481bd639c8d2e1fc7fedd 175 SUPERFAMILY SSF103515 23 175 6.02E-12 T 22-04-2016 IPR005546 Autotransporter beta-domain APECO1_RS06180 3779da21294481bd639c8d2e1fc7fedd 175 PANTHER PTHR12338 48 175 1.7E-33 T 22-04-2016 APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 1.8E-51 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.1E-62 T 22-04-2016 IPR000150 Cof protein GO:0016787 APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 SUPERFAMILY SSF56784 1 262 1.5E-60 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 272 63.244 T 22-04-2016 IPR023938 HMP-PP phosphatase GO:0016818 APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 Gene3D G3DSA:3.30.1240.10 98 174 6.2E-13 T 22-04-2016 APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 PANTHER PTHR10000 1 264 6.3E-203 T 22-04-2016 APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 22-04-2016 APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 Gene3D G3DSA:3.40.50.1000 2 72 4.0E-45 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 Gene3D G3DSA:3.40.50.1000 175 263 4.0E-45 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 PANTHER PTHR10000:SF21 1 264 6.3E-203 T 22-04-2016 APECO1_RS02270 a84db6ec329e2f5d5b1389f6f163de1c 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 3.3E-46 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APECO1_RS07010 be6394ed33e84dd10bd984a18ec2c35e 631 Pfam PF09972 Predicted membrane protein (DUF2207) 35 573 1.1E-67 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane APECO1_RS24370 8cc7d6a1740a55975d46c5b804496b70 465 PANTHER PTHR33843 2 461 0.0 T 22-04-2016 APECO1_RS24370 8cc7d6a1740a55975d46c5b804496b70 465 Pfam PF03611 PTS system sugar-specific permease component 15 410 8.9E-123 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APECO1_RS24370 8cc7d6a1740a55975d46c5b804496b70 465 PANTHER PTHR33843:SF5 2 461 0.0 T 22-04-2016 APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 Gene3D G3DSA:3.40.50.1100 106 195 1.6E-12 T 22-04-2016 APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 Gene3D G3DSA:3.40.50.1100 196 319 7.6E-52 T 22-04-2016 APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 Gene3D G3DSA:3.40.50.1100 324 401 2.3E-16 T 22-04-2016 APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 1.9E-130 T 22-04-2016 IPR004450 Threonine synthase-like APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 Gene3D G3DSA:3.90.1380.10 1 84 2.7E-22 T 22-04-2016 IPR029144 Threonine synthase, N-terminal APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 PANTHER PTHR10314 53 428 9.9E-144 T 22-04-2016 APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 PANTHER PTHR10314 25 36 9.9E-144 T 22-04-2016 APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 SUPERFAMILY SSF53686 1 426 3.4E-132 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 Pfam PF14821 Threonine synthase N terminus 8 80 7.5E-14 T 22-04-2016 IPR029144 Threonine synthase, N-terminal APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 PANTHER PTHR10314:SF1 53 428 9.9E-144 T 22-04-2016 APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 PANTHER PTHR10314:SF1 25 36 9.9E-144 T 22-04-2016 APECO1_RS00020 7561cb1abfb975af39dd224ef2e8b56d 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 369 7.8E-24 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 PANTHER PTHR18966:SF237 24 253 3.3E-166 T 22-04-2016 APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 Gene3D G3DSA:3.40.190.10 215 257 2.1E-43 T 22-04-2016 APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 Gene3D G3DSA:3.40.190.10 26 113 2.1E-43 T 22-04-2016 APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 PANTHER PTHR18966 24 253 3.3E-166 T 22-04-2016 APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 SUPERFAMILY SSF53850 1 257 1.15E-64 T 22-04-2016 APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 SMART SM00062 27 256 6.3E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 1.2E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 1.8E-100 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 APECO1_RS12830 0680ecd5cfb00c02b604ebc1e7cb3209 260 Gene3D G3DSA:3.40.190.10 116 212 3.8E-30 T 22-04-2016 APECO1_RS07960 b0e55e17c63be92cf77373e9cd1ef18e 222 Pfam PF11769 Protein of unknown function (DUF3313) 17 213 1.4E-57 T 22-04-2016 IPR021747 Protein of unknown function DUF3313 APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 PANTHER PTHR18964 62 177 1.6E-24 T 22-04-2016 APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 6.2E-30 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 120 6.2E-30 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 154 174 6.2E-30 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 140 6.2E-30 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 Gene3D G3DSA:1.10.10.10 30 180 1.7E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 SUPERFAMILY SSF46785 32 179 1.55E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 ProSitePatterns PS01117 MarR-type HTH domain signature. 103 137 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 PANTHER PTHR18964:SF141 62 177 1.6E-24 T 22-04-2016 APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 SMART SM00347 62 164 5.9E-30 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS24030 6a0fa6bf7bf9df52ecd831efd68eefa6 183 Pfam PF01047 MarR family 69 128 7.4E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PANTHER PTHR39083:SF1 482 779 4.2E-209 T 22-04-2016 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PANTHER PTHR39083:SF1 32 466 4.2E-209 T 22-04-2016 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 Pfam PF03170 Bacterial cellulose synthase subunit 71 680 1.4E-220 T 22-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PANTHER PTHR39083 482 779 4.2E-209 T 22-04-2016 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PANTHER PTHR39083 32 466 4.2E-209 T 22-04-2016 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PRINTS PR01440 Cellulose synthase subunit B signature 529 548 1.8E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PRINTS PR01440 Cellulose synthase subunit B signature 100 121 1.8E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PRINTS PR01440 Cellulose synthase subunit B signature 396 417 1.8E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PRINTS PR01440 Cellulose synthase subunit B signature 232 255 1.8E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PRINTS PR01440 Cellulose synthase subunit B signature 190 211 1.8E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PRINTS PR01440 Cellulose synthase subunit B signature 313 334 1.8E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APECO1_RS20240 bf08f27839069f1a9483ab6953d6b12f 779 PRINTS PR01440 Cellulose synthase subunit B signature 566 586 1.8E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APECO1_RS19130 4b4d6b046e63e399719b6e1d48f494ba 195 Gene3D G3DSA:3.10.610.10 39 131 8.3E-8 T 22-04-2016 APECO1_RS19130 4b4d6b046e63e399719b6e1d48f494ba 195 SUPERFAMILY SSF54523 40 176 3.03E-22 T 22-04-2016 APECO1_RS19130 4b4d6b046e63e399719b6e1d48f494ba 195 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 26 9.8E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19130 4b4d6b046e63e399719b6e1d48f494ba 195 PANTHER PTHR39583:SF1 1 195 6.4E-62 T 22-04-2016 APECO1_RS19130 4b4d6b046e63e399719b6e1d48f494ba 195 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.9E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS19130 4b4d6b046e63e399719b6e1d48f494ba 195 Pfam PF11612 Type II secretion system (T2SS), protein J 58 172 1.0E-6 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 APECO1_RS19130 4b4d6b046e63e399719b6e1d48f494ba 195 PANTHER PTHR39583 1 195 6.4E-62 T 22-04-2016 APECO1_RS19130 4b4d6b046e63e399719b6e1d48f494ba 195 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS08335 79f4bc957722a01a5dbae45b674bf2d3 252 Pfam PF13489 Methyltransferase domain 14 176 2.4E-15 T 22-04-2016 APECO1_RS08335 79f4bc957722a01a5dbae45b674bf2d3 252 PANTHER PTHR10108:SF890 3 229 1.2E-104 T 22-04-2016 APECO1_RS08335 79f4bc957722a01a5dbae45b674bf2d3 252 Gene3D G3DSA:1.10.150.290 133 230 5.1E-31 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 APECO1_RS08335 79f4bc957722a01a5dbae45b674bf2d3 252 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 251 47.647 T 22-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 APECO1_RS08335 79f4bc957722a01a5dbae45b674bf2d3 252 PANTHER PTHR10108 3 229 1.2E-104 T 22-04-2016 APECO1_RS08335 79f4bc957722a01a5dbae45b674bf2d3 252 Gene3D G3DSA:3.40.50.150 13 132 3.8E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS08335 79f4bc957722a01a5dbae45b674bf2d3 252 SUPERFAMILY SSF53335 22 239 1.47E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS12275 d307ccb7224a87bc3686037bd68ee470 69 PANTHER PTHR37531 2 67 2.6E-28 T 22-04-2016 APECO1_RS12275 d307ccb7224a87bc3686037bd68ee470 69 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 8.8E-17 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 APECO1_RS12275 d307ccb7224a87bc3686037bd68ee470 69 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 2.2E-19 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 APECO1_RS12275 d307ccb7224a87bc3686037bd68ee470 69 PANTHER PTHR37531:SF1 2 67 2.6E-28 T 22-04-2016 APECO1_RS07830 d0729ad5816d4b6c4021bdaefce3bc4d 108 PIRSF PIRSF025560 1 107 4.6E-44 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 APECO1_RS07830 d0729ad5816d4b6c4021bdaefce3bc4d 108 Pfam PF07027 Protein of unknown function (DUF1318) 18 107 2.2E-31 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 APECO1_RS00580 ce1316cdd95daf446802bb8bd7d429ff 297 SUPERFAMILY SSF51690 131 296 9.81E-60 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APECO1_RS00580 ce1316cdd95daf446802bb8bd7d429ff 297 Gene3D G3DSA:3.90.1170.20 20 151 3.3E-47 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APECO1_RS00580 ce1316cdd95daf446802bb8bd7d429ff 297 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 296 8.0E-105 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 APECO1_RS00580 ce1316cdd95daf446802bb8bd7d429ff 297 SUPERFAMILY SSF54675 14 130 1.39E-32 T 22-04-2016 APECO1_RS00580 ce1316cdd95daf446802bb8bd7d429ff 297 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 129 3.8E-24 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APECO1_RS00580 ce1316cdd95daf446802bb8bd7d429ff 297 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 131 295 4.1E-63 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APECO1_RS00580 ce1316cdd95daf446802bb8bd7d429ff 297 PANTHER PTHR32179 1 297 2.5E-130 T 22-04-2016 APECO1_RS00580 ce1316cdd95daf446802bb8bd7d429ff 297 PIRSF PIRSF006250 17 297 1.9E-115 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD APECO1_RS00580 ce1316cdd95daf446802bb8bd7d429ff 297 Gene3D G3DSA:3.20.20.70 152 285 8.4E-60 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS01875 875a99f64d7603f652ecfc87fb5ff0ba 320 PANTHER PTHR30024:SF17 10 320 4.7E-115 T 22-04-2016 APECO1_RS01875 875a99f64d7603f652ecfc87fb5ff0ba 320 SMART SM00062 24 239 1.4E-29 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS01875 875a99f64d7603f652ecfc87fb5ff0ba 320 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 25 320 8.6E-161 T 22-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 APECO1_RS01875 875a99f64d7603f652ecfc87fb5ff0ba 320 PANTHER PTHR30024 10 320 4.7E-115 T 22-04-2016 APECO1_RS01875 875a99f64d7603f652ecfc87fb5ff0ba 320 Gene3D G3DSA:3.40.190.10 106 227 2.5E-22 T 22-04-2016 APECO1_RS01875 875a99f64d7603f652ecfc87fb5ff0ba 320 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 239 8.1E-27 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APECO1_RS01875 875a99f64d7603f652ecfc87fb5ff0ba 320 SUPERFAMILY SSF53850 34 307 1.17E-46 T 22-04-2016 APECO1_RS20020 f20355a7134d6028db53207e99af23d3 250 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 37.978 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 APECO1_RS20020 f20355a7134d6028db53207e99af23d3 250 SUPERFAMILY SSF53335 10 246 2.9E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS20020 f20355a7134d6028db53207e99af23d3 250 Gene3D G3DSA:3.40.50.150 57 247 3.1E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS20020 f20355a7134d6028db53207e99af23d3 250 PANTHER PTHR36112:SF1 1 250 2.8E-145 T 22-04-2016 APECO1_RS20020 f20355a7134d6028db53207e99af23d3 250 PANTHER PTHR36112 1 250 2.8E-145 T 22-04-2016 APECO1_RS20020 f20355a7134d6028db53207e99af23d3 250 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 3.2E-105 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 APECO1_RS20020 f20355a7134d6028db53207e99af23d3 250 Gene3D G3DSA:3.40.1630.10 1 56 3.8E-30 T 22-04-2016 APECO1_RS21160 344f447b7988c3072dc40e0fc1b81a54 119 Pfam PF00825 Ribonuclease P 6 111 1.8E-32 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APECO1_RS21160 344f447b7988c3072dc40e0fc1b81a54 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.951 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APECO1_RS21160 344f447b7988c3072dc40e0fc1b81a54 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 105 3.0E-45 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APECO1_RS21160 344f447b7988c3072dc40e0fc1b81a54 119 Gene3D G3DSA:3.30.230.10 5 116 3.2E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS21160 344f447b7988c3072dc40e0fc1b81a54 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 7.5E-38 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APECO1_RS21160 344f447b7988c3072dc40e0fc1b81a54 119 SUPERFAMILY SSF54211 5 115 2.48E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS21160 344f447b7988c3072dc40e0fc1b81a54 119 PANTHER PTHR33992 2 116 5.6E-43 T 22-04-2016 APECO1_RS21160 344f447b7988c3072dc40e0fc1b81a54 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 APECO1_RS09185 cc7473d584bb508c165ca41b53c0bea2 326 PANTHER PTHR30472 4 326 1.2E-215 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS09185 cc7473d584bb508c165ca41b53c0bea2 326 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 1 326 31.952 T 22-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 APECO1_RS09185 cc7473d584bb508c165ca41b53c0bea2 326 PANTHER PTHR30472:SF29 4 326 1.2E-215 T 22-04-2016 APECO1_RS09185 cc7473d584bb508c165ca41b53c0bea2 326 Gene3D G3DSA:1.10.3470.10 6 324 2.7E-102 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS09185 cc7473d584bb508c165ca41b53c0bea2 326 SUPERFAMILY SSF81345 7 323 1.11E-84 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS09185 cc7473d584bb508c165ca41b53c0bea2 326 Pfam PF01032 FecCD transport family 22 323 7.4E-87 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS23860 a4cbcde22b00d446e17cd138f824c1fb 93 SUPERFAMILY SSF143414 4 90 2.75E-32 T 22-04-2016 APECO1_RS23860 a4cbcde22b00d446e17cd138f824c1fb 93 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 50 1.0E-19 T 22-04-2016 APECO1_RS23860 a4cbcde22b00d446e17cd138f824c1fb 93 SMART SM00877 4 80 3.2E-38 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS23860 a4cbcde22b00d446e17cd138f824c1fb 93 Pfam PF00936 BMC domain 5 80 4.7E-30 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS23860 a4cbcde22b00d446e17cd138f824c1fb 93 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 22-04-2016 IPR020808 Bacterial microcompartments protein, conserved site APECO1_RS23860 a4cbcde22b00d446e17cd138f824c1fb 93 PANTHER PTHR33941 1 89 7.1E-44 T 22-04-2016 APECO1_RS05115 c2bf0fc97a5b6d725827109a111dcd88 230 SUPERFAMILY SSF52499 5 221 1.7E-56 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS05115 c2bf0fc97a5b6d725827109a111dcd88 230 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 3 226 5.8E-137 T 22-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 APECO1_RS05115 c2bf0fc97a5b6d725827109a111dcd88 230 Gene3D G3DSA:3.40.50.850 3 223 3.6E-66 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS05115 c2bf0fc97a5b6d725827109a111dcd88 230 PANTHER PTHR11080 7 223 5.1E-92 T 22-04-2016 APECO1_RS05115 c2bf0fc97a5b6d725827109a111dcd88 230 PANTHER PTHR11080:SF19 7 223 5.1E-92 T 22-04-2016 APECO1_RS05115 c2bf0fc97a5b6d725827109a111dcd88 230 Pfam PF00857 Isochorismatase family 18 215 1.2E-41 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS05115 c2bf0fc97a5b6d725827109a111dcd88 230 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 1 228 60.696 T 22-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 APECO1_RS17880 cdccbcc9edbe0d90a5e314971b79dca6 110 SUPERFAMILY SSF50249 8 109 1.37E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS17880 cdccbcc9edbe0d90a5e314971b79dca6 110 Gene3D G3DSA:2.40.50.140 2 109 5.5E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS17880 cdccbcc9edbe0d90a5e314971b79dca6 110 PANTHER PTHR11586 1 110 1.6E-78 T 22-04-2016 APECO1_RS17880 cdccbcc9edbe0d90a5e314971b79dca6 110 PANTHER PTHR11586:SF19 1 110 1.6E-78 T 22-04-2016 APECO1_RS17880 cdccbcc9edbe0d90a5e314971b79dca6 110 Pfam PF01588 Putative tRNA binding domain 14 107 1.7E-31 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APECO1_RS15150 dab9733ac3dc54055abc75911c9b1809 422 PANTHER PTHR13847 2 394 5.2E-131 T 22-04-2016 APECO1_RS15150 dab9733ac3dc54055abc75911c9b1809 422 Pfam PF01266 FAD dependent oxidoreductase 3 390 1.9E-74 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APECO1_RS15150 dab9733ac3dc54055abc75911c9b1809 422 Hamap MF_00990 L-2-hydroxyglutarate oxidase LhgO [lhgO]. 1 422 86.799 T 22-04-2016 IPR030862 L-2-hydroxyglutarate oxidase LhgO GO:0034419 KEGG: 00630+1.1.3.15|MetaCyc: PWY-181 APECO1_RS15150 dab9733ac3dc54055abc75911c9b1809 422 Gene3D G3DSA:3.50.50.60 137 205 4.8E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS15150 dab9733ac3dc54055abc75911c9b1809 422 Gene3D G3DSA:3.50.50.60 2 76 4.8E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS15150 dab9733ac3dc54055abc75911c9b1809 422 PANTHER PTHR13847:SF191 2 394 5.2E-131 T 22-04-2016 APECO1_RS15150 dab9733ac3dc54055abc75911c9b1809 422 Gene3D G3DSA:3.30.9.10 206 228 7.0E-11 T 22-04-2016 APECO1_RS15150 dab9733ac3dc54055abc75911c9b1809 422 Gene3D G3DSA:3.30.9.10 86 136 7.0E-11 T 22-04-2016 APECO1_RS15150 dab9733ac3dc54055abc75911c9b1809 422 SUPERFAMILY SSF51905 1 286 2.5E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 PIRSF PIRSF001491 1 402 7.1E-114 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 SUPERFAMILY SSF53649 230 399 1.11E-55 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 SUPERFAMILY SSF53649 3 100 1.11E-55 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 PANTHER PTHR21110:SF0 235 403 1.3E-117 T 22-04-2016 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 PANTHER PTHR21110:SF0 2 212 1.3E-117 T 22-04-2016 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 Pfam PF01676 Metalloenzyme superfamily 3 388 1.8E-49 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 Gene3D G3DSA:3.40.720.10 2 100 2.7E-60 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 Gene3D G3DSA:3.40.720.10 233 401 2.7E-60 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 PANTHER PTHR21110 235 403 1.3E-117 T 22-04-2016 APECO1_RS19355 cef94da2ca62cd5cc7c8ac077e8fe368 408 PANTHER PTHR21110 2 212 1.3E-117 T 22-04-2016 APECO1_RS11400 d0b5d8a6acd6e3327882caaea9747aa3 248 SUPERFAMILY SSF53448 2 206 2.81E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11400 d0b5d8a6acd6e3327882caaea9747aa3 248 Gene3D G3DSA:3.90.550.10 1 195 4.1E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11400 d0b5d8a6acd6e3327882caaea9747aa3 248 PANTHER PTHR22916:SF4 1 248 4.0E-80 T 22-04-2016 APECO1_RS11400 d0b5d8a6acd6e3327882caaea9747aa3 248 Pfam PF00535 Glycosyl transferase family 2 4 99 8.6E-13 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS11400 d0b5d8a6acd6e3327882caaea9747aa3 248 TIGRFAM TIGR04009 wcaE: colanic acid biosynthesis glycosyltransferase WcaE 1 248 8.2E-155 T 22-04-2016 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE UniPathway: UPA00936 APECO1_RS11400 d0b5d8a6acd6e3327882caaea9747aa3 248 PANTHER PTHR22916 1 248 4.0E-80 T 22-04-2016 APECO1_RS10900 3118bed52ee8b35397453a5047d24274 438 SUPERFAMILY SSF103473 21 435 3.01E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS10900 3118bed52ee8b35397453a5047d24274 438 Pfam PF00083 Sugar (and other) transporter 28 237 8.5E-18 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS10900 3118bed52ee8b35397453a5047d24274 438 PANTHER PTHR23508:SF1 18 437 7.8E-180 T 22-04-2016 APECO1_RS10900 3118bed52ee8b35397453a5047d24274 438 PANTHER PTHR23508 18 437 7.8E-180 T 22-04-2016 APECO1_RS10900 3118bed52ee8b35397453a5047d24274 438 Pfam PF07690 Major Facilitator Superfamily 274 431 7.4E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS10900 3118bed52ee8b35397453a5047d24274 438 Gene3D G3DSA:1.20.1250.20 253 436 4.0E-21 T 22-04-2016 APECO1_RS10900 3118bed52ee8b35397453a5047d24274 438 Gene3D G3DSA:1.20.1250.20 22 230 8.3E-19 T 22-04-2016 APECO1_RS10900 3118bed52ee8b35397453a5047d24274 438 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 2.1E-151 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 APECO1_RS10900 3118bed52ee8b35397453a5047d24274 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS12155 8fe6c704892caa8f970edd57345a6640 237 SMART SM00014 94 210 3.6E-23 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS12155 8fe6c704892caa8f970edd57345a6640 237 SUPERFAMILY SSF48317 2 226 6.76E-36 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS12155 8fe6c704892caa8f970edd57345a6640 237 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 1 233 41.732 T 22-04-2016 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 UniPathway: UPA00030 APECO1_RS12155 8fe6c704892caa8f970edd57345a6640 237 Gene3D G3DSA:1.20.144.10 23 205 2.6E-13 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS12155 8fe6c704892caa8f970edd57345a6640 237 Pfam PF01569 PAP2 superfamily 133 207 2.0E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS25550 1217d653d7b5670c4b0160cd0bcc9496 259 Pfam PF01791 DeoC/LacD family aldolase 11 245 6.3E-54 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APECO1_RS25550 1217d653d7b5670c4b0160cd0bcc9496 259 PIRSF PIRSF001357 5 255 3.5E-78 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APECO1_RS25550 1217d653d7b5670c4b0160cd0bcc9496 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 55.137 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APECO1_RS25550 1217d653d7b5670c4b0160cd0bcc9496 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 3.3E-88 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APECO1_RS25550 1217d653d7b5670c4b0160cd0bcc9496 259 SMART SM01133 10 246 2.6E-80 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APECO1_RS25550 1217d653d7b5670c4b0160cd0bcc9496 259 SUPERFAMILY SSF51569 6 246 5.55E-82 T 22-04-2016 APECO1_RS25550 1217d653d7b5670c4b0160cd0bcc9496 259 PANTHER PTHR10889 1 256 3.3E-120 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APECO1_RS25550 1217d653d7b5670c4b0160cd0bcc9496 259 PANTHER PTHR10889:SF3 1 256 3.3E-120 T 22-04-2016 APECO1_RS25550 1217d653d7b5670c4b0160cd0bcc9496 259 Gene3D G3DSA:3.20.20.70 3 254 2.2E-93 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS20850 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 Gene3D G3DSA:3.40.1280.10 2 174 1.4E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APECO1_RS20850 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 PANTHER PTHR12029:SF45 1 189 1.1E-76 T 22-04-2016 APECO1_RS20850 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.2E-24 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 APECO1_RS20850 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 SUPERFAMILY SSF75217 4 174 7.85E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APECO1_RS20850 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 1.2E-36 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APECO1_RS20850 f5f3cc3c29c4eb2034c56f1cf5e7d477 229 PANTHER PTHR12029 1 189 1.1E-76 T 22-04-2016 APECO1_RS17160 fa99d13faf7a36aaea74920e536630ed 391 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 367 8.4E-73 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain APECO1_RS17160 fa99d13faf7a36aaea74920e536630ed 391 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 2 366 7.0E-133 T 22-04-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 APECO1_RS17160 fa99d13faf7a36aaea74920e536630ed 391 Gene3D G3DSA:3.40.50.2000 207 367 1.1E-4 T 22-04-2016 APECO1_RS17160 fa99d13faf7a36aaea74920e536630ed 391 SUPERFAMILY SSF53756 1 378 2.09E-85 T 22-04-2016 APECO1_RS17160 fa99d13faf7a36aaea74920e536630ed 391 Gene3D G3DSA:3.40.50.2000 1 206 2.2E-45 T 22-04-2016 APECO1_RS01740 9c12e1ce10faab9830dd142e6b78cdd9 327 SUPERFAMILY SSF53822 28 325 3.53E-66 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS01740 9c12e1ce10faab9830dd142e6b78cdd9 327 PANTHER PTHR32196 31 320 2.2E-112 T 22-04-2016 APECO1_RS01740 9c12e1ce10faab9830dd142e6b78cdd9 327 Pfam PF13407 Periplasmic binding protein domain 36 288 3.1E-51 T 22-04-2016 IPR025997 Periplasmic binding protein APECO1_RS01740 9c12e1ce10faab9830dd142e6b78cdd9 327 Gene3D G3DSA:3.40.50.2300 31 147 9.3E-28 T 22-04-2016 APECO1_RS01740 9c12e1ce10faab9830dd142e6b78cdd9 327 Gene3D G3DSA:3.40.50.2300 148 280 2.9E-25 T 22-04-2016 APECO1_RS01740 9c12e1ce10faab9830dd142e6b78cdd9 327 PANTHER PTHR32196:SF36 31 320 2.2E-112 T 22-04-2016 APECO1_RS15405 18964fe1d02ca23b27531684fa7dedd6 119 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 2.9E-36 T 22-04-2016 IPR009693 Glucitol operon activator APECO1_RS15405 18964fe1d02ca23b27531684fa7dedd6 119 PIRSF PIRSF011474 1 119 4.1E-48 T 22-04-2016 IPR009693 Glucitol operon activator APECO1_RS20150 e3ab30301330cd528c196bf259260fb2 242 PANTHER PTHR11019:SF46 136 242 1.4E-33 T 22-04-2016 APECO1_RS20150 e3ab30301330cd528c196bf259260fb2 242 SMART SM00342 152 234 1.6E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS20150 e3ab30301330cd528c196bf259260fb2 242 SUPERFAMILY SSF46689 188 235 6.72E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20150 e3ab30301330cd528c196bf259260fb2 242 PANTHER PTHR11019 136 242 1.4E-33 T 22-04-2016 APECO1_RS20150 e3ab30301330cd528c196bf259260fb2 242 Gene3D G3DSA:1.10.10.60 189 235 1.5E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20150 e3ab30301330cd528c196bf259260fb2 242 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 188 230 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS20150 e3ab30301330cd528c196bf259260fb2 242 Pfam PF12833 Helix-turn-helix domain 158 234 3.5E-12 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS20150 e3ab30301330cd528c196bf259260fb2 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 203 218 9.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS20150 e3ab30301330cd528c196bf259260fb2 242 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 218 234 9.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS07710 ec42c11c55edfa83f576958889cf7205 1132 Pfam PF12421 Fibronectin type III protein 949 1090 2.1E-37 T 22-04-2016 IPR021034 Domain of unknown function, DUF3672 APECO1_RS07710 ec42c11c55edfa83f576958889cf7205 1132 PANTHER PTHR36251 1 1107 0.0 T 22-04-2016 APECO1_RS07710 ec42c11c55edfa83f576958889cf7205 1132 Gene3D G3DSA:2.60.40.10 618 709 1.4E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS07710 ec42c11c55edfa83f576958889cf7205 1132 Pfam PF09327 Domain of unknown function (DUF1983) 846 925 1.5E-26 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 APECO1_RS07710 ec42c11c55edfa83f576958889cf7205 1132 PANTHER PTHR36251:SF2 1 1107 0.0 T 22-04-2016 APECO1_RS07710 ec42c11c55edfa83f576958889cf7205 1132 SUPERFAMILY SSF49265 617 722 3.77E-6 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APECO1_RS07710 ec42c11c55edfa83f576958889cf7205 1132 Pfam PF13550 Putative phage tail protein 330 497 1.1E-40 T 22-04-2016 IPR032876 Tip attachment protein J APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Pfam PF00231 ATP synthase 5 286 9.5E-92 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.385 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.86E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.86E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.86E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.86E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 PANTHER PTHR11693 1 287 8.5E-137 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 236 282 4.6E-30 T 22-04-2016 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 SUPERFAMILY SSF52943 2 287 5.1E-97 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:3.40.1380.10 63 191 5.0E-44 T 22-04-2016 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.9E-113 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 19 60 5.2E-40 T 22-04-2016 APECO1_RS21305 d21bdcc2f9fc8b3e07ce5eaed473d7bb 287 Gene3D G3DSA:1.10.287.80 202 235 5.2E-40 T 22-04-2016 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 Pfam PF13416 Bacterial extracellular solute-binding protein 46 335 2.6E-35 T 22-04-2016 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 SUPERFAMILY SSF53850 29 369 2.36E-105 T 22-04-2016 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 Gene3D G3DSA:3.40.190.10 151 319 5.8E-76 T 22-04-2016 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PANTHER PTHR30222:SF11 12 370 3.7E-175 T 22-04-2016 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PANTHER PTHR30222 12 370 3.7E-175 T 22-04-2016 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 5.0E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 PIRSF PIRSF019574 1 370 2.2E-144 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APECO1_RS04155 20701487bcf6febdf7f59ea5e718333c 370 Gene3D G3DSA:3.40.190.10 27 150 5.2E-12 T 22-04-2016 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 Gene3D G3DSA:1.10.10.60 165 221 8.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 SUPERFAMILY SSF46689 222 273 2.87E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 SMART SM00342 185 268 1.4E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 Gene3D G3DSA:2.60.120.10 46 118 8.4E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 Gene3D G3DSA:1.10.10.60 222 274 9.9E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 PANTHER PTHR11019:SF11 36 276 2.1E-75 T 22-04-2016 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 Pfam PF12833 Helix-turn-helix domain 191 270 3.4E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 1.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 1.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS22560 659c8cb41a413b75ad287ddb35e23e59 283 PANTHER PTHR11019 36 276 2.1E-75 T 22-04-2016 APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 SUPERFAMILY SSF48179 164 291 2.04E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 290 2.2E-115 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 162 1.3E-48 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 Gene3D G3DSA:1.10.1040.10 165 293 6.9E-41 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 285 8.9E-37 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 Gene3D G3DSA:3.40.50.720 1 163 3.4E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 PANTHER PTHR22981:SF70 1 295 4.6E-123 T 22-04-2016 APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 PIRSF PIRSF000103 1 292 5.1E-69 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 SUPERFAMILY SSF51735 1 163 5.66E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24950 7783e765f47e146510af70f0f492ea74 295 PANTHER PTHR22981 1 295 4.6E-123 T 22-04-2016 APECO1_RS21025 ee3828c3f3fdb5b7492172a2a4204a91 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 165 3.0E-94 T 22-04-2016 APECO1_RS12565 dd5030432f824628a93f897cd8b0dd6a 322 Pfam PF00535 Glycosyl transferase family 2 11 171 3.3E-34 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS12565 dd5030432f824628a93f897cd8b0dd6a 322 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 322 61.0 T 22-04-2016 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53|UniPathway: UPA00030|UniPathway: UPA00036 APECO1_RS12565 dd5030432f824628a93f897cd8b0dd6a 322 Gene3D G3DSA:3.90.550.10 8 147 2.8E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS12565 dd5030432f824628a93f897cd8b0dd6a 322 SUPERFAMILY SSF53448 8 230 4.03E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS12565 dd5030432f824628a93f897cd8b0dd6a 322 PANTHER PTHR10859:SF49 3 322 6.2E-158 T 22-04-2016 APECO1_RS12565 dd5030432f824628a93f897cd8b0dd6a 322 PANTHER PTHR10859 3 322 6.2E-158 T 22-04-2016 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 PANTHER PTHR30562 16 476 0.0 T 22-04-2016 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 Gene3D G3DSA:1.10.1040.10 282 485 2.6E-73 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 SUPERFAMILY SSF51735 5 281 7.09E-100 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 462 5.5E-101 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 4.0E-53 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 Gene3D G3DSA:3.40.50.720 8 281 5.9E-115 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 3.3E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 3.3E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 3.3E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 3.3E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 PANTHER PTHR30562:SF7 16 476 0.0 T 22-04-2016 APECO1_RS12145 4546d07fc465199ec3f95a74176567f6 488 SUPERFAMILY SSF48179 283 484 1.94E-64 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:2.40.33.10 73 168 8.4E-33 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.7E-193 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:3.20.20.60 2 72 1.7E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:3.20.20.60 169 325 1.7E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF50800 70 166 1.67E-29 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 3.0E-151 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF52935 323 469 9.68E-37 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.0E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 4.3E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 4.3E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 4.3E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 4.3E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 4.3E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 4.3E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 4.3E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 Gene3D G3DSA:3.40.1380.20 326 469 2.7E-48 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF51621 1 74 2.09E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 SUPERFAMILY SSF51621 156 340 2.09E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS09000 b364e47c26991e4e943e4d21553d6140 470 PANTHER PTHR11817 1 464 2.3E-261 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22915 79bede3bffa4ccddd28601448f999cd8 543 PANTHER PTHR10010:SF26 1 446 2.1E-47 T 22-04-2016 APECO1_RS22915 79bede3bffa4ccddd28601448f999cd8 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 1.7E-171 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 APECO1_RS22915 79bede3bffa4ccddd28601448f999cd8 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 2.1E-136 T 22-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 APECO1_RS22915 79bede3bffa4ccddd28601448f999cd8 543 PANTHER PTHR10010 1 446 2.1E-47 T 22-04-2016 APECO1_RS22915 79bede3bffa4ccddd28601448f999cd8 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 1.7E-35 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 APECO1_RS22915 79bede3bffa4ccddd28601448f999cd8 543 Pfam PF02690 Na+/Pi-cotransporter 158 251 2.7E-8 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 APECO1_RS22915 79bede3bffa4ccddd28601448f999cd8 543 SUPERFAMILY SSF109755 321 531 2.93E-23 T 22-04-2016 APECO1_RS17960 362ca19ec97b6ac525bd34a13e2a82da 470 Gene3D G3DSA:1.10.2020.10 46 137 3.1E-44 T 22-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APECO1_RS17960 362ca19ec97b6ac525bd34a13e2a82da 470 Pfam PF02614 Glucuronate isomerase 1 465 2.1E-230 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APECO1_RS17960 362ca19ec97b6ac525bd34a13e2a82da 470 PANTHER PTHR30068 2 469 0.0 T 22-04-2016 APECO1_RS17960 362ca19ec97b6ac525bd34a13e2a82da 470 PANTHER PTHR30068:SF4 2 469 0.0 T 22-04-2016 APECO1_RS17960 362ca19ec97b6ac525bd34a13e2a82da 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 50.676 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APECO1_RS17960 362ca19ec97b6ac525bd34a13e2a82da 470 Gene3D G3DSA:3.20.20.140 139 466 4.4E-166 T 22-04-2016 APECO1_RS17960 362ca19ec97b6ac525bd34a13e2a82da 470 Gene3D G3DSA:3.20.20.140 4 44 4.4E-166 T 22-04-2016 APECO1_RS17960 362ca19ec97b6ac525bd34a13e2a82da 470 SUPERFAMILY SSF51556 3 465 1.77E-184 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS16445 9c8f7929d68cfe51e355a10748a5d223 88 PANTHER PTHR39585 1 88 3.3E-40 T 22-04-2016 APECO1_RS16445 9c8f7929d68cfe51e355a10748a5d223 88 Gene3D G3DSA:1.10.150.250 2 85 3.9E-32 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase APECO1_RS16445 9c8f7929d68cfe51e355a10748a5d223 88 PANTHER PTHR39585:SF1 1 88 3.3E-40 T 22-04-2016 APECO1_RS16445 9c8f7929d68cfe51e355a10748a5d223 88 SUPERFAMILY SSF109910 1 78 4.18E-27 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase APECO1_RS16445 9c8f7929d68cfe51e355a10748a5d223 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 75 1.2E-25 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase APECO1_RS15980 6b01d6265e81394c3c801ace029e51d3 221 PANTHER PTHR38033 8 218 1.7E-45 T 22-04-2016 APECO1_RS15980 6b01d6265e81394c3c801ace029e51d3 221 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 9 211 2.7E-52 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU APECO1_RS15980 6b01d6265e81394c3c801ace029e51d3 221 Pfam PF09850 Type VI secretion system protein DotU 9 207 1.3E-47 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU APECO1_RS15980 6b01d6265e81394c3c801ace029e51d3 221 PANTHER PTHR38033:SF1 8 218 1.7E-45 T 22-04-2016 APECO1_RS14655 1c8da3533f2d20291f824125ffb24499 200 PANTHER PTHR32552 1 197 5.1E-58 T 22-04-2016 APECO1_RS14655 1c8da3533f2d20291f824125ffb24499 200 Gene3D G3DSA:3.30.420.10 31 189 2.1E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS14655 1c8da3533f2d20291f824125ffb24499 200 SUPERFAMILY SSF53098 32 191 3.64E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS14655 1c8da3533f2d20291f824125ffb24499 200 Pfam PF00665 Integrase core domain 37 151 6.2E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APECO1_RS11260 a3de6eba545c2a2a8ac31958c2a6dd53 258 PANTHER PTHR21235:SF2 1 258 5.3E-119 T 22-04-2016 APECO1_RS11260 a3de6eba545c2a2a8ac31958c2a6dd53 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 45.05 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APECO1_RS11260 a3de6eba545c2a2a8ac31958c2a6dd53 258 Pfam PF00977 Histidine biosynthesis protein 5 239 5.3E-79 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APECO1_RS11260 a3de6eba545c2a2a8ac31958c2a6dd53 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.7E-118 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APECO1_RS11260 a3de6eba545c2a2a8ac31958c2a6dd53 258 PANTHER PTHR21235 1 258 5.3E-119 T 22-04-2016 APECO1_RS11260 a3de6eba545c2a2a8ac31958c2a6dd53 258 Gene3D G3DSA:3.20.20.70 4 257 1.5E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS11260 a3de6eba545c2a2a8ac31958c2a6dd53 258 SUPERFAMILY SSF51366 1 257 1.57E-73 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 PANTHER PTHR32481 1 344 1.1E-147 T 22-04-2016 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 Gene3D G3DSA:2.40.30.40 71 148 2.7E-26 T 22-04-2016 IPR023367 Peptidase M42, domain 2 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 PANTHER PTHR32481:SF0 1 344 1.1E-147 T 22-04-2016 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 PIRSF PIRSF001123 1 344 2.0E-118 T 22-04-2016 IPR008007 Peptidase M42 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 Pfam PF05343 M42 glutamyl aminopeptidase 43 325 5.8E-84 T 22-04-2016 IPR008007 Peptidase M42 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 SUPERFAMILY SSF101821 67 166 1.36E-19 T 22-04-2016 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 SUPERFAMILY SSF53187 3 77 2.09E-62 T 22-04-2016 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 SUPERFAMILY SSF53187 158 339 2.09E-62 T 22-04-2016 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 Gene3D G3DSA:3.40.630.10 157 343 3.8E-79 T 22-04-2016 APECO1_RS13440 f76365b792276e2d8be7998c53ea0ffb 345 Gene3D G3DSA:3.40.630.10 3 70 3.8E-79 T 22-04-2016 APECO1_RS08485 66de74ba0a64dab522e87ff2456963c7 82 PANTHER PTHR23508 1 75 4.5E-49 T 22-04-2016 APECO1_RS08485 66de74ba0a64dab522e87ff2456963c7 82 PANTHER PTHR23508:SF6 1 75 4.5E-49 T 22-04-2016 APECO1_RS08485 66de74ba0a64dab522e87ff2456963c7 82 SUPERFAMILY SSF103473 9 64 7.06E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 SUPERFAMILY SSF51735 6 253 2.06E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 PIRSF PIRSF000094 1 260 3.0E-125 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 PANTHER PTHR24322:SF317 159 191 1.1E-67 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 PANTHER PTHR24322:SF317 11 143 1.1E-67 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 PANTHER PTHR24322 159 191 1.1E-67 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 PANTHER PTHR24322 11 143 1.1E-67 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 Gene3D G3DSA:3.40.50.720 2 253 5.2E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07150 17517a241b56a96f753c1748f4deac12 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 4.8E-85 T 22-04-2016 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 Gene3D G3DSA:1.10.8.60 167 242 1.1E-33 T 22-04-2016 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 2.9E-32 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 SUPERFAMILY SSF52540 35 221 2.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 Gene3D G3DSA:1.20.272.10 243 361 5.6E-49 T 22-04-2016 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 500 640 5.5E-59 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.0E-42 T 22-04-2016 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 PANTHER PTHR11669:SF0 1 438 5.7E-194 T 22-04-2016 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 SUPERFAMILY SSF48019 243 366 2.55E-36 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 SMART SM00382 37 178 1.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 417 498 1.1E-20 T 22-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 PANTHER PTHR11669 1 438 5.7E-194 T 22-04-2016 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 8.2E-134 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 APECO1_RS02390 7eec58491df06925d66b91613cee2e74 643 Gene3D G3DSA:3.40.50.300 15 166 8.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05590 6d811a959a23ed1a3377425992e348e2 180 PANTHER PTHR35602:SF2 1 180 9.8E-144 T 22-04-2016 APECO1_RS05590 6d811a959a23ed1a3377425992e348e2 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.8E-72 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA APECO1_RS05590 6d811a959a23ed1a3377425992e348e2 180 PANTHER PTHR35602 1 180 9.8E-144 T 22-04-2016 APECO1_RS05590 6d811a959a23ed1a3377425992e348e2 180 Gene3D G3DSA:3.40.50.1820 2 77 4.9E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS05590 6d811a959a23ed1a3377425992e348e2 180 SUPERFAMILY SSF53474 2 176 4.47E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS05590 6d811a959a23ed1a3377425992e348e2 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 56.44 T 22-04-2016 IPR022987 Uncharacterised protein family UPF0227 APECO1_RS25430 9eedb5517f09f78a67b2daff1c916936 109 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 2 106 2.6E-40 T 22-04-2016 IPR009350 Minor tail T APECO1_RS25430 9eedb5517f09f78a67b2daff1c916936 109 Pfam PF06223 Minor tail protein T 6 105 8.1E-40 T 22-04-2016 IPR009350 Minor tail T APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 Gene3D G3DSA:3.20.130.10 348 537 2.4E-75 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 1.7E-88 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 SUPERFAMILY SSF117457 361 536 1.44E-61 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 PANTHER PTHR30389:SF6 2 548 0.0 T 22-04-2016 APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 PIRSF PIRSF001394 30 548 4.1E-236 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 9.3E-66 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 PANTHER PTHR30389 2 548 0.0 T 22-04-2016 APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 Pfam PF05683 Fumarase C-terminus 332 537 6.1E-93 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 1.4E-33 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APECO1_RS23590 824f1e95d87aaa759330cd2856064fa7 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 SUPERFAMILY SSF46689 10 83 2.74E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 PANTHER PTHR30328:SF16 12 205 1.9E-35 T 22-04-2016 APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 Gene3D G3DSA:1.10.357.10 71 197 1.8E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 SUPERFAMILY SSF48498 81 207 3.28E-26 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 Gene3D G3DSA:1.10.10.60 45 70 8.0E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 PANTHER PTHR30328 12 205 1.9E-35 T 22-04-2016 APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 Gene3D G3DSA:1.10.10.60 11 44 2.4E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS24470 f6a01d2f5e1113877bdb651dc520ad3f 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.0E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 Gene3D G3DSA:3.10.580.10 198 334 1.2E-14 T 22-04-2016 APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 Pfam PF00571 CBS domain 284 333 0.0024 T 22-04-2016 IPR000644 CBS domain APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 SUPERFAMILY SSF56176 344 428 4.91E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 SMART SM01091 346 426 4.6E-30 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 PANTHER PTHR22777:SF16 1 446 0.0 T 22-04-2016 APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 Pfam PF01595 Domain of unknown function DUF21 7 197 3.0E-38 T 22-04-2016 IPR002550 Domain of unknown function DUF21 APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 Pfam PF03471 Transporter associated domain 347 425 2.2E-22 T 22-04-2016 IPR005170 Transporter-associated domain APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 SUPERFAMILY SSF54631 200 335 1.89E-22 T 22-04-2016 APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 PANTHER PTHR22777 1 446 0.0 T 22-04-2016 APECO1_RS24530 5e17a86516a0e922489aad67242b433d 447 Gene3D G3DSA:3.30.465.10 342 425 1.1E-28 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APECO1_RS21815 020482bdd6a275cee332f439d7c017e7 185 SUPERFAMILY SSF53697 6 184 1.57E-34 T 22-04-2016 APECO1_RS21815 020482bdd6a275cee332f439d7c017e7 185 Pfam PF01380 SIS domain 33 155 4.0E-13 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS21815 020482bdd6a275cee332f439d7c017e7 185 PANTHER PTHR10937:SF14 6 166 1.0E-33 T 22-04-2016 APECO1_RS21815 020482bdd6a275cee332f439d7c017e7 185 PANTHER PTHR10937 6 166 1.0E-33 T 22-04-2016 APECO1_RS21815 020482bdd6a275cee332f439d7c017e7 185 Gene3D G3DSA:3.40.50.10490 6 184 1.4E-41 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 26 3.1E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 SUPERFAMILY SSF54862 38 325 8.37E-72 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 38 116 9.4E-25 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 188 229 9.4E-25 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 PANTHER PTHR11938:SF68 99 213 5.6E-95 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 PANTHER PTHR11938:SF68 34 73 5.6E-95 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 PANTHER PTHR11938 34 73 5.6E-95 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 PANTHER PTHR11938 99 213 5.6E-95 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 117 149 3.0E-12 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 Gene3D G3DSA:3.30.70.20 150 187 4.7E-9 T 22-04-2016 APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 Pfam PF13247 4Fe-4S dicluster domain 105 207 5.1E-23 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS17410 29eea6a04eac805723cbb3c52b5c9e5f 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 Gene3D G3DSA:3.40.50.2300 30 229 1.2E-65 T 22-04-2016 APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 Pfam PF13458 Periplasmic binding protein 31 349 7.1E-57 T 22-04-2016 IPR028081 Leucine-binding protein domain APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 72 90 5.1E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 5.1E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 259 277 5.1E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 93 103 5.1E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 332 347 5.1E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 5.1E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 282 295 5.1E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 SUPERFAMILY SSF53822 29 363 1.04E-88 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 PANTHER PTHR30483 3 362 1.2E-232 T 22-04-2016 APECO1_RS19800 38b1fbcde875217431af40489b23b3dd 372 PANTHER PTHR30483:SF16 3 362 1.2E-232 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APECO1_RS04310 381ce87c5bcf3d0b2aba341f2658a9dc 1077 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1074 0.0 T 22-04-2016 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type APECO1_RS04310 381ce87c5bcf3d0b2aba341f2658a9dc 1077 Gene3D G3DSA:3.40.50.300 421 501 1.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04310 381ce87c5bcf3d0b2aba341f2658a9dc 1077 Gene3D G3DSA:3.40.50.300 544 624 1.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04310 381ce87c5bcf3d0b2aba341f2658a9dc 1077 SUPERFAMILY SSF52540 695 784 1.68E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04310 381ce87c5bcf3d0b2aba341f2658a9dc 1077 SUPERFAMILY SSF52540 815 859 1.68E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04310 381ce87c5bcf3d0b2aba341f2658a9dc 1077 SUPERFAMILY SSF52540 516 616 1.68E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04310 381ce87c5bcf3d0b2aba341f2658a9dc 1077 SUPERFAMILY SSF52540 421 468 1.68E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09215 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Pfam PF01632 Ribosomal protein L35 2 60 2.3E-22 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS09215 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APECO1_RS09215 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APECO1_RS09215 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APECO1_RS09215 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APECO1_RS09215 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 SUPERFAMILY SSF143034 2 64 3.01E-22 T 22-04-2016 APECO1_RS09215 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-26 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APECO1_RS09215 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS09215 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PANTHER PTHR33343 1 65 1.6E-28 T 22-04-2016 APECO1_RS11785 9349b0c023e13e5b28da19a2c598a33c 90 PANTHER PTHR33677:SF1 1 90 1.7E-71 T 22-04-2016 APECO1_RS11785 9349b0c023e13e5b28da19a2c598a33c 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 1.3E-19 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 APECO1_RS11785 9349b0c023e13e5b28da19a2c598a33c 90 PANTHER PTHR33677 1 90 1.7E-71 T 22-04-2016 APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 PANTHER PTHR24221:SF188 3 582 0.0 T 22-04-2016 APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 Pfam PF00005 ABC transporter 359 509 1.5E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 SUPERFAMILY SSF90123 8 325 3.01E-75 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 PANTHER PTHR24221 3 582 0.0 T 22-04-2016 APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 1.0E-275 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 Pfam PF00664 ABC transporter transmembrane region 27 297 2.8E-61 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 SUPERFAMILY SSF52540 332 580 1.04E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 Gene3D G3DSA:1.20.1560.10 13 325 4.4E-71 T 22-04-2016 APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 Gene3D G3DSA:3.40.50.300 342 574 2.0E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04680 e440a509009f132cc0ec21378fd115bc 582 SMART SM00382 368 555 1.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS20930 ba0822e5d185085e666e9ed46d2122e1 345 PIRSF PIRSF015268 4 345 9.3E-158 T 22-04-2016 IPR011204 Virulence protein RhuM-like APECO1_RS20930 ba0822e5d185085e666e9ed46d2122e1 345 Pfam PF13310 Virulence protein RhuM family 70 323 1.4E-117 T 22-04-2016 IPR011204 Virulence protein RhuM-like APECO1_RS20930 ba0822e5d185085e666e9ed46d2122e1 345 PANTHER PTHR35810 5 345 1.5E-203 T 22-04-2016 APECO1_RS20930 ba0822e5d185085e666e9ed46d2122e1 345 PANTHER PTHR35810:SF1 5 345 1.5E-203 T 22-04-2016 APECO1_RS01925 bb3a2355ed8ffd71f40b99e614e3471d 364 Pfam PF07759 Protein of unknown function (DUF1615) 50 363 2.1E-148 T 22-04-2016 IPR011673 Protein of unknown function DUF1615 APECO1_RS01925 bb3a2355ed8ffd71f40b99e614e3471d 364 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 20 364 0.0 T 22-04-2016 IPR011673 Protein of unknown function DUF1615 APECO1_RS22545 06744b57890ae741b5e299026266dd4c 765 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 765 0.0 T 22-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APECO1_RS22545 06744b57890ae741b5e299026266dd4c 765 PANTHER PTHR30191 1 765 0.0 T 22-04-2016 APECO1_RS22545 06744b57890ae741b5e299026266dd4c 765 SUPERFAMILY SSF51998 1 764 6.1E-222 T 22-04-2016 APECO1_RS22545 06744b57890ae741b5e299026266dd4c 765 Pfam PF01228 Glycine radical 646 747 2.9E-27 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APECO1_RS22545 06744b57890ae741b5e299026266dd4c 765 PANTHER PTHR30191:SF4 1 765 0.0 T 22-04-2016 APECO1_RS22545 06744b57890ae741b5e299026266dd4c 765 Gene3D G3DSA:3.20.70.20 1 764 4.1E-257 T 22-04-2016 APECO1_RS22545 06744b57890ae741b5e299026266dd4c 765 Pfam PF02901 Pyruvate formate lyase-like 1 626 3.1E-204 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APECO1_RS22545 06744b57890ae741b5e299026266dd4c 765 ProSitePatterns PS00850 Glycine radical domain signature. 736 744 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 Pfam PF00232 Glycosyl hydrolase family 1 2 459 1.7E-156 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 PANTHER PTHR10353:SF35 4 463 8.7E-295 T 22-04-2016 APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 PANTHER PTHR10353 4 463 8.7E-295 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 416 2.03E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 436 2.03E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 2.03E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 2.03E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 389 2.03E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 SUPERFAMILY SSF51445 2 460 1.24E-160 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APECO1_RS21245 d9c95aecca1a11f02bba9a09b36b1bcb 464 Gene3D G3DSA:3.20.20.80 3 462 2.5E-149 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 2.6E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PRINTS PR00834 HtrA/DegQ protease family signature 186 210 2.6E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PRINTS PR00834 HtrA/DegQ protease family signature 145 165 2.6E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 2.6E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 2.6E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PRINTS PR00834 HtrA/DegQ protease family signature 329 341 2.6E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 SMART SM00228 289 371 8.5E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 SMART SM00228 396 466 1.5E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 287 367 2.5E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 392 463 3.0E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PANTHER PTHR22939:SF84 105 416 8.3E-272 T 22-04-2016 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PANTHER PTHR22939:SF84 30 61 8.3E-272 T 22-04-2016 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PANTHER PTHR22939:SF84 81 89 8.3E-272 T 22-04-2016 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 Gene3D G3DSA:2.30.42.10 406 471 3.0E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 Gene3D G3DSA:2.40.10.10 179 290 2.2E-44 T 22-04-2016 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 SUPERFAMILY SSF50494 7 59 1.97E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 SUPERFAMILY SSF50494 111 298 1.97E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 Pfam PF13365 Trypsin-like peptidase domain 114 250 1.5E-32 T 22-04-2016 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 SUPERFAMILY SSF50156 271 379 1.46E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 472 4.7E-168 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PANTHER PTHR22939 105 416 8.3E-272 T 22-04-2016 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PANTHER PTHR22939 30 61 8.3E-272 T 22-04-2016 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 PANTHER PTHR22939 81 89 8.3E-272 T 22-04-2016 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 SUPERFAMILY SSF50156 398 471 2.63E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 Gene3D G3DSA:2.30.42.10 291 388 3.9E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS00865 ddbf85ad8d62ca278b3938f07c1f6fba 474 Gene3D G3DSA:2.40.10.10 38 178 2.4E-36 T 22-04-2016 APECO1_RS17850 75f1ddc04ebf9d5bc247ed264936c742 168 Gene3D G3DSA:3.40.470.10 2 163 8.4E-59 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APECO1_RS17850 75f1ddc04ebf9d5bc247ed264936c742 168 SUPERFAMILY SSF52141 2 163 8.5E-48 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APECO1_RS17850 75f1ddc04ebf9d5bc247ed264936c742 168 PANTHER PTHR12159 1 163 2.0E-71 T 22-04-2016 IPR015637 G/U mismatch-specific DNA glycosylase GO:0006281|GO:0019104 APECO1_RS17850 75f1ddc04ebf9d5bc247ed264936c742 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 51.132 T 22-04-2016 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 APECO1_RS17850 75f1ddc04ebf9d5bc247ed264936c742 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 1.5E-24 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APECO1_RS02930 b4661d2c115765b3bb1d3390ddfe05c1 205 SUPERFAMILY SSF110849 45 175 4.53E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin APECO1_RS02930 b4661d2c115765b3bb1d3390ddfe05c1 205 PANTHER PTHR30083:SF1 1 205 3.5E-124 T 22-04-2016 APECO1_RS02930 b4661d2c115765b3bb1d3390ddfe05c1 205 Gene3D G3DSA:3.90.1530.10 44 146 5.0E-12 T 22-04-2016 APECO1_RS02930 b4661d2c115765b3bb1d3390ddfe05c1 205 Pfam PF02195 ParB-like nuclease domain 48 141 2.6E-17 T 22-04-2016 IPR003115 ParB/Sulfiredoxin APECO1_RS02930 b4661d2c115765b3bb1d3390ddfe05c1 205 PANTHER PTHR30083 1 205 3.5E-124 T 22-04-2016 APECO1_RS02930 b4661d2c115765b3bb1d3390ddfe05c1 205 SMART SM00470 47 142 1.1E-16 T 22-04-2016 IPR003115 ParB/Sulfiredoxin APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 271 40.089 T 22-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 Gene3D G3DSA:1.10.3680.10 22 208 3.5E-27 T 22-04-2016 IPR029024 TerB-like APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 Pfam PF00226 DnaJ domain 208 267 7.1E-11 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 Pfam PF05099 Tellurite resistance protein TerB 47 170 4.9E-10 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 SMART SM00271 204 269 5.2E-17 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 SUPERFAMILY SSF46565 131 267 4.29E-31 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 PRINTS PR00625 DnaJ domain signature 225 240 1.7E-7 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 PRINTS PR00625 DnaJ domain signature 249 269 1.7E-7 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 PRINTS PR00625 DnaJ domain signature 207 225 1.7E-7 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS00315 69fa4e2f49e35a6975f6c312d31ab7ab 271 Gene3D G3DSA:1.10.287.110 209 267 2.7E-14 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS12925 5941562d75874e46644bb46cf2b16545 274 PIRSF PIRSF018455 1 274 6.3E-121 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 APECO1_RS12925 5941562d75874e46644bb46cf2b16545 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 71.237 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 APECO1_RS12925 5941562d75874e46644bb46cf2b16545 274 Gene3D G3DSA:3.30.1380.10 21 272 2.3E-107 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APECO1_RS12925 5941562d75874e46644bb46cf2b16545 274 SUPERFAMILY SSF55166 21 272 6.51E-103 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APECO1_RS12925 5941562d75874e46644bb46cf2b16545 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 2.6E-94 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 PANTHER PTHR10285 1 284 2.2E-159 T 22-04-2016 APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 Gene3D G3DSA:3.40.50.300 1 288 1.6E-128 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 2.5E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 2.5E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 2.5E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 2.5E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.6E-78 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 PANTHER PTHR10285:SF72 1 284 2.2E-159 T 22-04-2016 APECO1_RS19255 9849c6af54015aaa176c988e5adad49b 289 SUPERFAMILY SSF52540 4 286 1.05E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.4E-74 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PANTHER PTHR20854 1 267 2.3E-109 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.0E-36 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.0E-36 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.0E-36 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.0E-36 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 SUPERFAMILY SSF56655 1 261 2.36E-86 T 22-04-2016 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 Gene3D G3DSA:3.40.190.80 153 259 9.7E-39 T 22-04-2016 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.6E-62 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.6E-62 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.6E-62 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.6E-62 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.6E-62 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.6E-62 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 Gene3D G3DSA:3.30.540.10 2 152 7.1E-54 T 22-04-2016 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 PANTHER PTHR20854:SF4 1 267 2.3E-109 T 22-04-2016 APECO1_RS14365 ccdb8a845e15184007f49a2366f7bc56 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APECO1_RS05095 4d711e8b1fec352504a886d5e0c6798f 164 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 4 159 7.6E-87 T 22-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 APECO1_RS05095 4d711e8b1fec352504a886d5e0c6798f 164 PANTHER PTHR30466 1 164 3.3E-77 T 22-04-2016 APECO1_RS05095 4d711e8b1fec352504a886d5e0c6798f 164 Gene3D G3DSA:2.30.110.10 3 157 1.5E-51 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS05095 4d711e8b1fec352504a886d5e0c6798f 164 PANTHER PTHR30466:SF2 1 164 3.3E-77 T 22-04-2016 APECO1_RS05095 4d711e8b1fec352504a886d5e0c6798f 164 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 1 164 43.566 T 22-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 APECO1_RS05095 4d711e8b1fec352504a886d5e0c6798f 164 Pfam PF01613 Flavin reductase like domain 13 159 2.0E-29 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APECO1_RS05095 4d711e8b1fec352504a886d5e0c6798f 164 SMART SM00903 13 158 1.0E-51 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APECO1_RS05095 4d711e8b1fec352504a886d5e0c6798f 164 SUPERFAMILY SSF50475 1 161 1.77E-44 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS06835 6c7ecda3a7aff94fbc0f41261121ff3a 68 Pfam PF02831 gpW 2 67 1.3E-20 T 22-04-2016 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 APECO1_RS06835 6c7ecda3a7aff94fbc0f41261121ff3a 68 Gene3D G3DSA:3.30.1580.10 1 67 6.1E-30 T 22-04-2016 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 APECO1_RS06835 6c7ecda3a7aff94fbc0f41261121ff3a 68 SUPERFAMILY SSF64210 1 58 4.32E-21 T 22-04-2016 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 APECO1_RS06835 6c7ecda3a7aff94fbc0f41261121ff3a 68 ProDom PD019366 PROPHAGE HEAD JOINING GP3 COMPLETION HEAD-TO-TAIL W PROPHAGE-DERIVED DNA HEAD-TAIL 23 52 4.0E-10 T 22-04-2016 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 APECO1_RS08715 f69928f7609423fe9add55e097543ae6 346 Gene3D G3DSA:3.40.50.720 1 129 5.7E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08715 f69928f7609423fe9add55e097543ae6 346 PANTHER PTHR22604:SF53 1 343 3.4E-143 T 22-04-2016 APECO1_RS08715 f69928f7609423fe9add55e097543ae6 346 SUPERFAMILY SSF51735 2 192 3.25E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08715 f69928f7609423fe9add55e097543ae6 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 4.3E-25 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APECO1_RS08715 f69928f7609423fe9add55e097543ae6 346 PANTHER PTHR22604 1 343 3.4E-143 T 22-04-2016 APECO1_RS08715 f69928f7609423fe9add55e097543ae6 346 Gene3D G3DSA:3.30.360.10 130 339 1.2E-30 T 22-04-2016 APECO1_RS08715 f69928f7609423fe9add55e097543ae6 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 6.8E-20 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APECO1_RS18935 edc9be11bc26a002d33a77c99671d51f 122 Pfam PF09350 Domain of unknown function (DUF1992) 7 72 2.2E-23 T 22-04-2016 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain APECO1_RS18935 edc9be11bc26a002d33a77c99671d51f 122 PANTHER PTHR39158 1 122 1.7E-46 T 22-04-2016 APECO1_RS06695 949cf0a7e9006ea7ddba19bbdbcac122 80 SUPERFAMILY SSF47413 1 59 2.31E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS06695 949cf0a7e9006ea7ddba19bbdbcac122 80 Pfam PF14549 DNA-binding transcriptional regulator Cro 2 53 3.5E-16 T 22-04-2016 APECO1_RS06695 949cf0a7e9006ea7ddba19bbdbcac122 80 Gene3D G3DSA:1.10.260.40 1 57 3.9E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS24320 213ca43a94790bc20ac2736f54db6219 219 Pfam PF10679 Protein of unknown function (DUF2491) 4 215 1.5E-68 T 22-04-2016 IPR019621 Protein of unknown function DUF2491 APECO1_RS24480 70d716e72e21ffc79d5aeaf73bac2f60 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 7.4E-23 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APECO1_RS24480 70d716e72e21ffc79d5aeaf73bac2f60 206 PANTHER PTHR10516 86 205 1.1E-65 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APECO1_RS24480 70d716e72e21ffc79d5aeaf73bac2f60 206 PANTHER PTHR10516 14 60 1.1E-65 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APECO1_RS24480 70d716e72e21ffc79d5aeaf73bac2f60 206 Gene3D G3DSA:1.10.287.460 2 88 1.3E-25 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APECO1_RS24480 70d716e72e21ffc79d5aeaf73bac2f60 206 PANTHER PTHR10516:SF320 86 205 1.1E-65 T 22-04-2016 APECO1_RS24480 70d716e72e21ffc79d5aeaf73bac2f60 206 PANTHER PTHR10516:SF320 14 60 1.1E-65 T 22-04-2016 APECO1_RS24480 70d716e72e21ffc79d5aeaf73bac2f60 206 Gene3D G3DSA:3.10.50.40 89 205 4.3E-51 T 22-04-2016 APECO1_RS24480 70d716e72e21ffc79d5aeaf73bac2f60 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 3.5E-28 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APECO1_RS24480 70d716e72e21ffc79d5aeaf73bac2f60 206 SUPERFAMILY SSF54534 8 205 2.95E-56 T 22-04-2016 APECO1_RS06120 1abf5e2adf8e65279eb663ae88236d58 134 ProDom PD021249 YDFO YCGX ENVELOPE CYTOPLASMIC STY1988 CP-933X ECS1626 YBCV PROPHAGE 1 127 3.0E-71 T 22-04-2016 IPR009833 Uncharacterised protein DUF1398 APECO1_RS06120 1abf5e2adf8e65279eb663ae88236d58 134 Pfam PF07166 Protein of unknown function (DUF1398) 8 125 1.8E-44 T 22-04-2016 IPR009833 Uncharacterised protein DUF1398 APECO1_RS06120 1abf5e2adf8e65279eb663ae88236d58 134 SUPERFAMILY SSF160419 3 127 1.7E-42 T 22-04-2016 IPR009833 Uncharacterised protein DUF1398 APECO1_RS06120 1abf5e2adf8e65279eb663ae88236d58 134 Gene3D G3DSA:3.30.1810.10 1 127 1.4E-53 T 22-04-2016 IPR009833 Uncharacterised protein DUF1398 APECO1_RS06145 519426c6cb4729f38c892ad1502527ab 88 Pfam PF10798 Biofilm development protein YmgB/AriR 29 87 8.2E-24 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APECO1_RS06145 519426c6cb4729f38c892ad1502527ab 88 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 30 88 6.0E-5 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PANTHER PTHR32195 1 410 1.1E-212 T 22-04-2016 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 1.8E-161 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PANTHER PTHR32195:SF18 1 410 1.1E-212 T 22-04-2016 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 1.3E-154 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 2.8E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 2.8E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 2.8E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 2.8E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 2.8E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 2.8E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 2.8E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 2.8E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS18250 07a33fc416ca8f6867ddc23a2265eda8 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 2.8E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS07790 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 Pfam PF00582 Universal stress protein family 1 144 6.6E-30 T 22-04-2016 IPR006016 UspA GO:0006950 APECO1_RS07790 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PANTHER PTHR31964:SF42 1 144 9.8E-31 T 22-04-2016 APECO1_RS07790 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 SUPERFAMILY SSF52402 3 144 5.11E-31 T 22-04-2016 APECO1_RS07790 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PRINTS PR01438 Universal stress protein signature 2 20 7.3E-9 T 22-04-2016 IPR006015 Universal stress protein A APECO1_RS07790 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PRINTS PR01438 Universal stress protein signature 122 144 7.3E-9 T 22-04-2016 IPR006015 Universal stress protein A APECO1_RS07790 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PRINTS PR01438 Universal stress protein signature 105 117 7.3E-9 T 22-04-2016 IPR006015 Universal stress protein A APECO1_RS07790 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 Gene3D G3DSA:3.40.50.620 3 144 5.4E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS07790 2ce28f8d2c735cd6eef7ac6b1d1e1ef8 144 PANTHER PTHR31964 1 144 9.8E-31 T 22-04-2016 APECO1_RS03840 9cc81d16a4ada6aa83fe23a5941d98e1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 2.3E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS03840 9cc81d16a4ada6aa83fe23a5941d98e1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 2.3E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS03840 9cc81d16a4ada6aa83fe23a5941d98e1 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 2.3E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS03840 9cc81d16a4ada6aa83fe23a5941d98e1 368 Pfam PF12698 ABC-2 family transporter protein 25 358 6.5E-49 T 22-04-2016 APECO1_RS03840 9cc81d16a4ada6aa83fe23a5941d98e1 368 PANTHER PTHR30294 1 368 0.0 T 22-04-2016 APECO1_RS03840 9cc81d16a4ada6aa83fe23a5941d98e1 368 PANTHER PTHR30294:SF15 1 368 0.0 T 22-04-2016 APECO1_RS11865 97a5885cd6fadba53b1d7e63543c1ff5 758 PANTHER PTHR30634 9 758 0.0 T 22-04-2016 APECO1_RS11865 97a5885cd6fadba53b1d7e63543c1ff5 758 PANTHER PTHR30634:SF3 9 758 0.0 T 22-04-2016 APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 SUPERFAMILY SSF52540 307 549 2.87E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 Pfam PF00005 ABC transporter 330 479 3.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 Gene3D G3DSA:1.20.1560.10 2 296 9.4E-31 T 22-04-2016 APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 Gene3D G3DSA:3.40.50.300 311 543 1.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 PANTHER PTHR24222 1 566 0.0 T 22-04-2016 APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 Pfam PF00664 ABC transporter transmembrane region 39 248 3.5E-21 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 PANTHER PTHR24222:SF24 1 566 0.0 T 22-04-2016 APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 SUPERFAMILY SSF90123 2 301 1.7E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APECO1_RS10840 38f43585a074927464b946e65d1ef4eb 570 SMART SM00382 339 533 6.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 PIRSF PIRSF001394 30 548 3.8E-239 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 Gene3D G3DSA:3.20.130.10 348 537 2.6E-76 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 Pfam PF05683 Fumarase C-terminus 332 537 1.4E-94 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 PANTHER PTHR30389 2 548 0.0 T 22-04-2016 APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 2.1E-86 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 SUPERFAMILY SSF117457 361 536 3.14E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 2.0E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 PANTHER PTHR30389:SF6 2 548 0.0 T 22-04-2016 APECO1_RS08655 de6f60430b310db5b498f9c0d4a4d943 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 6.7E-31 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APECO1_RS15880 55e8a6c9dcf10fd338ad148871d44a6f 215 Gene3D G3DSA:3.40.225.10 1 210 2.3E-68 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS15880 55e8a6c9dcf10fd338ad148871d44a6f 215 SUPERFAMILY SSF53639 1 212 1.51E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS15880 55e8a6c9dcf10fd338ad148871d44a6f 215 SMART SM01007 8 182 1.8E-69 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS15880 55e8a6c9dcf10fd338ad148871d44a6f 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 62.238 T 22-04-2016 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197|UniPathway: UPA00563 APECO1_RS15880 55e8a6c9dcf10fd338ad148871d44a6f 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 4.7E-49 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APECO1_RS15880 55e8a6c9dcf10fd338ad148871d44a6f 215 PANTHER PTHR22789 1 215 2.0E-103 T 22-04-2016 APECO1_RS15880 55e8a6c9dcf10fd338ad148871d44a6f 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 6.5E-134 T 22-04-2016 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197|UniPathway: UPA00563 APECO1_RS15880 55e8a6c9dcf10fd338ad148871d44a6f 215 PANTHER PTHR22789:SF0 1 215 2.0E-103 T 22-04-2016 APECO1_RS02185 1f7484da04a26c71589cd8c4ac88991f 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 4.2E-88 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 APECO1_RS02185 1f7484da04a26c71589cd8c4ac88991f 204 SUPERFAMILY SSF81452 12 202 2.62E-59 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APECO1_RS02185 1f7484da04a26c71589cd8c4ac88991f 204 PANTHER PTHR11403:SF2 8 204 4.6E-123 T 22-04-2016 APECO1_RS02185 1f7484da04a26c71589cd8c4ac88991f 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 2.1E-15 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APECO1_RS02185 1f7484da04a26c71589cd8c4ac88991f 204 PANTHER PTHR11403 8 204 4.6E-123 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 APECO1_RS02185 1f7484da04a26c71589cd8c4ac88991f 204 Gene3D G3DSA:1.20.120.80 26 202 2.0E-51 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 APECO1_RS10830 7ea3862e1e4fa1e3b0cbdfe27c45a46c 426 Pfam PF07690 Major Facilitator Superfamily 25 365 5.1E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS10830 7ea3862e1e4fa1e3b0cbdfe27c45a46c 426 SUPERFAMILY SSF103473 4 414 1.57E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS10830 7ea3862e1e4fa1e3b0cbdfe27c45a46c 426 PANTHER PTHR12778 19 411 1.1E-62 T 22-04-2016 APECO1_RS10830 7ea3862e1e4fa1e3b0cbdfe27c45a46c 426 Gene3D G3DSA:1.20.1250.20 229 414 2.6E-10 T 22-04-2016 APECO1_RS00380 f2c1bd21f7625fc0b698ff4e321382a9 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 6 327 1.9E-191 T 22-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 APECO1_RS00380 f2c1bd21f7625fc0b698ff4e321382a9 327 SUPERFAMILY SSF53850 22 323 1.24E-60 T 22-04-2016 APECO1_RS00380 f2c1bd21f7625fc0b698ff4e321382a9 327 Gene3D G3DSA:3.40.190.10 122 258 2.1E-24 T 22-04-2016 APECO1_RS00380 f2c1bd21f7625fc0b698ff4e321382a9 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 289 3.4E-16 T 22-04-2016 APECO1_RS00380 f2c1bd21f7625fc0b698ff4e321382a9 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 2.1E-154 T 22-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 APECO1_RS00380 f2c1bd21f7625fc0b698ff4e321382a9 327 Gene3D G3DSA:3.40.190.10 259 316 1.9E-14 T 22-04-2016 APECO1_RS00380 f2c1bd21f7625fc0b698ff4e321382a9 327 Gene3D G3DSA:3.40.190.10 15 120 1.9E-14 T 22-04-2016 APECO1_RS00380 f2c1bd21f7625fc0b698ff4e321382a9 327 PANTHER PTHR30006:SF3 1 326 6.3E-138 T 22-04-2016 APECO1_RS00380 f2c1bd21f7625fc0b698ff4e321382a9 327 PANTHER PTHR30006 1 326 6.3E-138 T 22-04-2016 APECO1_RS24250 af4c67b6ac07399a4e46b4788dd7e7a6 445 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 194 413 9.0E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS24250 af4c67b6ac07399a4e46b4788dd7e7a6 445 PANTHER PTHR30404 1 445 9.3E-262 T 22-04-2016 APECO1_RS24250 af4c67b6ac07399a4e46b4788dd7e7a6 445 Gene3D G3DSA:3.40.630.40 341 416 5.7E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS24250 af4c67b6ac07399a4e46b4788dd7e7a6 445 Gene3D G3DSA:3.40.630.40 192 289 5.7E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS24250 af4c67b6ac07399a4e46b4788dd7e7a6 445 SMART SM00646 254 413 4.6E-76 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APECO1_RS24250 af4c67b6ac07399a4e46b4788dd7e7a6 445 PANTHER PTHR30404:SF1 1 445 9.3E-262 T 22-04-2016 APECO1_RS24250 af4c67b6ac07399a4e46b4788dd7e7a6 445 SUPERFAMILY SSF53187 340 416 3.04E-53 T 22-04-2016 APECO1_RS24250 af4c67b6ac07399a4e46b4788dd7e7a6 445 SUPERFAMILY SSF53187 192 288 3.04E-53 T 22-04-2016 APECO1_RS22000 a7c80d38d9cb05f56091814e11c040a2 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 9.5E-129 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APECO1_RS22000 a7c80d38d9cb05f56091814e11c040a2 483 PIRSF PIRSF006247 1 483 1.9E-185 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APECO1_RS22000 a7c80d38d9cb05f56091814e11c040a2 483 PANTHER PTHR32024 1 483 2.9E-283 T 22-04-2016 APECO1_RS22000 a7c80d38d9cb05f56091814e11c040a2 483 Pfam PF02386 Cation transport protein 37 477 3.0E-92 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APECO1_RS22000 a7c80d38d9cb05f56091814e11c040a2 483 PANTHER PTHR32024:SF2 1 483 2.9E-283 T 22-04-2016 APECO1_RS01785 55988384a8ead7f782b732190e0c6488 296 PANTHER PTHR21631:SF4 1 294 1.7E-166 T 22-04-2016 APECO1_RS01785 55988384a8ead7f782b732190e0c6488 296 PANTHER PTHR21631 1 294 1.7E-166 T 22-04-2016 APECO1_RS01785 55988384a8ead7f782b732190e0c6488 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 291 4.7E-138 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 APECO1_RS01785 55988384a8ead7f782b732190e0c6488 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 250 1.8E-49 T 22-04-2016 APECO1_RS01785 55988384a8ead7f782b732190e0c6488 296 Gene3D G3DSA:3.20.20.60 5 286 2.2E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS01785 55988384a8ead7f782b732190e0c6488 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 50.761 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 APECO1_RS01785 55988384a8ead7f782b732190e0c6488 296 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 APECO1_RS01785 55988384a8ead7f782b732190e0c6488 296 SUPERFAMILY SSF51621 5 288 1.08E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS21030 dae937c829a5202a601db84cee6098d3 120 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 12 71 2.0E-29 T 22-04-2016 IPR020264 Uncharacterised protein family YidG APECO1_RS21030 dae937c829a5202a601db84cee6098d3 120 Pfam PF02656 Domain of unknown function (DUF202) 12 65 6.1E-10 T 22-04-2016 IPR003807 Domain of unknown function DUF202 APECO1_RS23555 6da51f605a6d8b0aed027998b72f6c2f 445 PIRSF PIRSF006060 1 435 1.0E-61 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS23555 6da51f605a6d8b0aed027998b72f6c2f 445 PANTHER PTHR11785:SF259 7 445 2.8E-189 T 22-04-2016 APECO1_RS23555 6da51f605a6d8b0aed027998b72f6c2f 445 PANTHER PTHR11785 7 445 2.8E-189 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS23555 6da51f605a6d8b0aed027998b72f6c2f 445 Pfam PF13520 Amino acid permease 12 403 6.0E-50 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS11990 925db9b4ad38753374cef75e12d06554 239 PIRSF PIRSF005011 1 239 4.5E-157 T 22-04-2016 IPR023604 Uncharacterised protein family SanA APECO1_RS11990 925db9b4ad38753374cef75e12d06554 239 PANTHER PTHR30336:SF0 2 239 1.8E-126 T 22-04-2016 APECO1_RS11990 925db9b4ad38753374cef75e12d06554 239 PANTHER PTHR30336 2 239 1.8E-126 T 22-04-2016 APECO1_RS11990 925db9b4ad38753374cef75e12d06554 239 Gene3D G3DSA:3.40.50.620 39 170 2.8E-8 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS11990 925db9b4ad38753374cef75e12d06554 239 Pfam PF02698 DUF218 domain 48 170 9.9E-18 T 22-04-2016 IPR003848 Domain of unknown function DUF218 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 Gene3D G3DSA:2.40.160.50 708 807 6.2E-20 T 22-04-2016 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 Gene3D G3DSA:2.40.160.50 392 669 6.2E-20 T 22-04-2016 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 Pfam PF01103 Surface antigen 448 810 7.4E-106 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 Pfam PF07244 Surface antigen variable number repeat 348 421 4.1E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 Pfam PF07244 Surface antigen variable number repeat 176 263 5.9E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 Pfam PF07244 Surface antigen variable number repeat 92 172 1.1E-10 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 Pfam PF07244 Surface antigen variable number repeat 266 344 3.6E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 PANTHER PTHR12815 703 810 0.0 T 22-04-2016 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 PANTHER PTHR12815 5 673 0.0 T 22-04-2016 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 810 1.4E-286 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 PIRSF PIRSF006076 1 810 9.9E-260 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 PANTHER PTHR12815:SF11 703 810 0.0 T 22-04-2016 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 PANTHER PTHR12815:SF11 5 673 0.0 T 22-04-2016 APECO1_RS00935 5b93fec990cce1f1436b86bf99c25015 810 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 810 26.299 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APECO1_RS11665 cd1eaff0cc049ce3b4785994be6d4a32 99 ProDom PD067735 GP81 ORF2 GPA 5'REGION ORF81 1 99 2.0E-40 T 22-04-2016 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 236 253 1.1E-87 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 278 1.1E-87 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 221 1.1E-87 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 1.1E-87 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 1.1E-87 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 1.1E-87 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 1.1E-87 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 1.1E-87 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 PANTHER PTHR40457 1 289 1.5E-174 T 22-04-2016 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 Gene3D G3DSA:2.40.230.10 37 288 9.5E-102 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 Pfam PF02253 Phospholipase A1 43 285 1.9E-89 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS21750 343dd1e81622ba09d6b2732873468058 289 SUPERFAMILY SSF56931 39 288 1.7E-92 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APECO1_RS24875 cd306fc3684b624f211e58583483d9a1 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 226.291 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APECO1_RS24875 cd306fc3684b624f211e58583483d9a1 394 PIRSF PIRSF016049 1 392 1.3E-184 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APECO1_RS24875 cd306fc3684b624f211e58583483d9a1 394 PANTHER PTHR30387:SF2 1 394 1.7E-183 T 22-04-2016 APECO1_RS24875 cd306fc3684b624f211e58583483d9a1 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.2E-167 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APECO1_RS24875 cd306fc3684b624f211e58583483d9a1 394 Gene3D G3DSA:3.20.20.150 1 391 5.2E-156 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24875 cd306fc3684b624f211e58583483d9a1 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 1.1E-239 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APECO1_RS24875 cd306fc3684b624f211e58583483d9a1 394 SUPERFAMILY SSF51658 1 133 1.52E-79 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24875 cd306fc3684b624f211e58583483d9a1 394 SUPERFAMILY SSF51658 163 383 1.52E-79 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24875 cd306fc3684b624f211e58583483d9a1 394 PANTHER PTHR30387 1 394 1.7E-183 T 22-04-2016 APECO1_RS05055 0114f6ae7e1075852c5a91092266417a 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 3.2E-27 T 22-04-2016 APECO1_RS05055 0114f6ae7e1075852c5a91092266417a 101 Hamap MF_01155 Chaperone modulatory protein CbpM [cbpM]. 1 97 24.819 T 22-04-2016 IPR022835 Chaperone modulatory protein CbpM APECO1_RS11415 447e16ec9d11ef60b6173adefcfd62f8 162 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 141 8.1E-8 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS11415 447e16ec9d11ef60b6173adefcfd62f8 162 PANTHER PTHR23416 2 158 6.1E-47 T 22-04-2016 APECO1_RS11415 447e16ec9d11ef60b6173adefcfd62f8 162 TIGRFAM TIGR04016 WcaB: colanic acid biosynthesis acetyltransferase WcaB 17 162 3.0E-96 T 22-04-2016 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB GO:0016747 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00936 APECO1_RS11415 447e16ec9d11ef60b6173adefcfd62f8 162 PANTHER PTHR23416:SF55 2 158 6.1E-47 T 22-04-2016 APECO1_RS11415 447e16ec9d11ef60b6173adefcfd62f8 162 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS11415 447e16ec9d11ef60b6173adefcfd62f8 162 PIRSF PIRSF000441 2 161 1.6E-46 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APECO1_RS11415 447e16ec9d11ef60b6173adefcfd62f8 162 SUPERFAMILY SSF51161 12 158 5.82E-32 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS11415 447e16ec9d11ef60b6173adefcfd62f8 162 Gene3D G3DSA:2.160.10.10 60 159 1.3E-23 T 22-04-2016 APECO1_RS21660 e2dc0f90a43dcf9f9e87557275b40ef6 848 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 APECO1_RS21660 e2dc0f90a43dcf9f9e87557275b40ef6 848 PANTHER PTHR38760 2 848 0.0 T 22-04-2016 APECO1_RS21660 e2dc0f90a43dcf9f9e87557275b40ef6 848 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 APECO1_RS21660 e2dc0f90a43dcf9f9e87557275b40ef6 848 PIRSF PIRSF001444 1 847 0.0 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 APECO1_RS21660 e2dc0f90a43dcf9f9e87557275b40ef6 848 Pfam PF12633 Adenylate cyclase NT domain 5 200 5.8E-81 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 APECO1_RS21660 e2dc0f90a43dcf9f9e87557275b40ef6 848 Pfam PF01295 Adenylate cyclase, class-I 228 825 1.9E-258 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 APECO1_RS15510 e0ef488a5fde62cb45115f4e5aaf1c66 116 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 8.4E-30 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APECO1_RS15510 e0ef488a5fde62cb45115f4e5aaf1c66 116 PANTHER PTHR34535 2 116 9.9E-99 T 22-04-2016 APECO1_RS15510 e0ef488a5fde62cb45115f4e5aaf1c66 116 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 116 3.0E-44 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APECO1_RS15510 e0ef488a5fde62cb45115f4e5aaf1c66 116 PANTHER PTHR34535:SF1 2 116 9.9E-99 T 22-04-2016 APECO1_RS15510 e0ef488a5fde62cb45115f4e5aaf1c66 116 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 22-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site APECO1_RS15510 e0ef488a5fde62cb45115f4e5aaf1c66 116 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 22.726 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APECO1_RS15510 e0ef488a5fde62cb45115f4e5aaf1c66 116 PIRSF PIRSF004761 1 116 1.7E-36 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APECO1_RS02880 83ef19341687c2c11f8d33c19564f079 318 PANTHER PTHR30532 19 318 1.2E-163 T 22-04-2016 APECO1_RS02880 83ef19341687c2c11f8d33c19564f079 318 Gene3D G3DSA:3.40.50.1980 29 157 6.1E-26 T 22-04-2016 APECO1_RS02880 83ef19341687c2c11f8d33c19564f079 318 PANTHER PTHR30532:SF2 19 318 1.2E-163 T 22-04-2016 APECO1_RS02880 83ef19341687c2c11f8d33c19564f079 318 Pfam PF01497 Periplasmic binding protein 49 297 1.8E-32 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APECO1_RS02880 83ef19341687c2c11f8d33c19564f079 318 Gene3D G3DSA:3.40.50.1980 158 318 5.5E-45 T 22-04-2016 APECO1_RS02880 83ef19341687c2c11f8d33c19564f079 318 SUPERFAMILY SSF53807 31 317 5.1E-50 T 22-04-2016 APECO1_RS07585 92f86c3681684f5f13058a229d953d47 165 Pfam PF00959 Phage lysozyme 48 154 7.4E-33 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APECO1_RS07585 92f86c3681684f5f13058a229d953d47 165 SUPERFAMILY SSF53955 17 163 1.23E-54 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS07585 92f86c3681684f5f13058a229d953d47 165 Gene3D G3DSA:1.10.530.40 34 163 1.7E-54 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 APECO1_RS07585 92f86c3681684f5f13058a229d953d47 165 PANTHER PTHR38107 1 165 3.7E-79 T 22-04-2016 APECO1_RS07585 92f86c3681684f5f13058a229d953d47 165 PANTHER PTHR38107:SF2 1 165 3.7E-79 T 22-04-2016 APECO1_RS11805 a43c3af02f2c55bf2a18178046584a57 826 Pfam PF13954 PapC N-terminal domain 26 161 2.4E-33 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APECO1_RS11805 a43c3af02f2c55bf2a18178046584a57 826 PANTHER PTHR30451:SF3 1 826 0.0 T 22-04-2016 APECO1_RS11805 a43c3af02f2c55bf2a18178046584a57 826 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 289 299 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APECO1_RS11805 a43c3af02f2c55bf2a18178046584a57 826 Pfam PF13953 PapC C-terminal domain 753 813 3.0E-9 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APECO1_RS11805 a43c3af02f2c55bf2a18178046584a57 826 SUPERFAMILY SSF141729 49 153 1.09E-27 T 22-04-2016 APECO1_RS11805 a43c3af02f2c55bf2a18178046584a57 826 PANTHER PTHR30451 1 826 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS11805 a43c3af02f2c55bf2a18178046584a57 826 Pfam PF00577 Outer membrane usher protein 177 743 6.4E-186 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS16545 817aa86965fb432fcb8084fa66e67bb1 246 PANTHER PTHR34387:SF1 5 239 5.0E-68 T 22-04-2016 APECO1_RS16545 817aa86965fb432fcb8084fa66e67bb1 246 Pfam PF04402 Protein of unknown function (DUF541) 30 230 2.7E-44 T 22-04-2016 IPR007497 Protein of unknown function DUF541 APECO1_RS16545 817aa86965fb432fcb8084fa66e67bb1 246 PANTHER PTHR34387 5 239 5.0E-68 T 22-04-2016 APECO1_RS24555 ef23aa39d7fa5e452a998421f0e9cd7d 113 SUPERFAMILY SSF110857 1 110 7.85E-35 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APECO1_RS24555 ef23aa39d7fa5e452a998421f0e9cd7d 113 Gene3D G3DSA:3.10.490.10 1 111 2.2E-40 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APECO1_RS24555 ef23aa39d7fa5e452a998421f0e9cd7d 113 PANTHER PTHR12510 1 112 2.3E-71 T 22-04-2016 APECO1_RS24555 ef23aa39d7fa5e452a998421f0e9cd7d 113 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 8.5E-25 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like APECO1_RS24555 ef23aa39d7fa5e452a998421f0e9cd7d 113 PANTHER PTHR12510:SF6 1 112 2.3E-71 T 22-04-2016 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 177 1.3E-22 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PANTHER PTHR11405 18 122 1.5E-192 T 22-04-2016 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PANTHER PTHR11405 144 191 1.5E-192 T 22-04-2016 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PANTHER PTHR11405 214 375 1.5E-192 T 22-04-2016 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 Gene3D G3DSA:3.40.50.1370 175 362 1.4E-58 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 2.7E-8 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 340 363 2.7E-8 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 2.7E-8 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 5 393 5.6E-204 T 22-04-2016 IPR017702 Putative carbamoyltransferase YgeW APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PANTHER PTHR11405:SF40 18 122 1.5E-192 T 22-04-2016 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PANTHER PTHR11405:SF40 144 191 1.5E-192 T 22-04-2016 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PANTHER PTHR11405:SF40 214 375 1.5E-192 T 22-04-2016 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 3.7E-7 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 3.7E-7 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 3.7E-7 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 SUPERFAMILY SSF53671 18 372 1.57E-57 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 186 372 6.2E-41 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APECO1_RS16305 995ff266c1b47085d0b0f20ba664298e 395 Gene3D G3DSA:3.40.50.1370 17 174 2.8E-32 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APECO1_RS06080 ea40546ff5fa239ccd6a8c629b7c4bf7 285 Gene3D G3DSA:1.10.3470.10 53 268 1.3E-6 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS06080 ea40546ff5fa239ccd6a8c629b7c4bf7 285 PANTHER PTHR30477:SF9 2 272 1.3E-140 T 22-04-2016 APECO1_RS06080 ea40546ff5fa239ccd6a8c629b7c4bf7 285 SUPERFAMILY SSF81345 6 261 8.76E-35 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS06080 ea40546ff5fa239ccd6a8c629b7c4bf7 285 PANTHER PTHR30477 2 272 1.3E-140 T 22-04-2016 APECO1_RS06080 ea40546ff5fa239ccd6a8c629b7c4bf7 285 Pfam PF00950 ABC 3 transport family 10 265 2.2E-76 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APECO1_RS24825 69f6f3958e8cdd4568f3a63b68f10b91 198 PANTHER PTHR30349 2 197 1.2E-134 T 22-04-2016 APECO1_RS24825 69f6f3958e8cdd4568f3a63b68f10b91 198 PANTHER PTHR30349:SF31 2 197 1.2E-134 T 22-04-2016 APECO1_RS24825 69f6f3958e8cdd4568f3a63b68f10b91 198 SUPERFAMILY SSF56349 4 184 6.18E-43 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS24825 69f6f3958e8cdd4568f3a63b68f10b91 198 Gene3D G3DSA:1.10.443.10 5 174 9.7E-39 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS24825 69f6f3958e8cdd4568f3a63b68f10b91 198 Pfam PF00589 Phage integrase family 6 176 3.8E-50 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS18960 664a2e56c1e17b694a7b948bb241b549 118 SUPERFAMILY SSF46946 2 114 4.71E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APECO1_RS18960 664a2e56c1e17b694a7b948bb241b549 118 PANTHER PTHR10871 2 118 1.4E-68 T 22-04-2016 APECO1_RS18960 664a2e56c1e17b694a7b948bb241b549 118 PIRSF PIRSF002134 1 118 5.0E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18960 664a2e56c1e17b694a7b948bb241b549 118 Gene3D G3DSA:4.10.910.10 72 118 8.3E-28 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal APECO1_RS18960 664a2e56c1e17b694a7b948bb241b549 118 Gene3D G3DSA:1.10.8.50 2 71 8.9E-27 T 22-04-2016 APECO1_RS18960 664a2e56c1e17b694a7b948bb241b549 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.8E-52 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18960 664a2e56c1e17b694a7b948bb241b549 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 7.2E-34 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18960 664a2e56c1e17b694a7b948bb241b549 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 APECO1_RS18960 664a2e56c1e17b694a7b948bb241b549 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.319 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS11570 f375940b62251dc1263b598d7a5c0d72 159 Pfam PF06995 Phage P2 GpU 6 125 7.9E-45 T 22-04-2016 IPR009734 Myoviridae, GpU APECO1_RS11570 f375940b62251dc1263b598d7a5c0d72 159 PIRSF PIRSF029208 1 154 4.3E-63 T 22-04-2016 IPR016912 Bacteriophage P2, GpU APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.52E-17 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.52E-17 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.52E-17 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 Gene3D G3DSA:3.30.70.600 3 102 2.3E-42 T 22-04-2016 IPR027486 Ribosomal protein S10 domain APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 SUPERFAMILY SSF54999 5 101 1.02E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 SMART SM01403 7 101 8.9E-55 T 22-04-2016 IPR027486 Ribosomal protein S10 domain APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.4E-34 T 22-04-2016 IPR027486 Ribosomal protein S10 domain APECO1_RS19075 9d6129626f9f807a8ce60eb3fa40b527 103 PANTHER PTHR11700 1 102 1.8E-53 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APECO1_RS11450 214cd4246a86f39d498b8edff441c6ef 96 SMART SM00530 32 88 0.0018 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS11450 214cd4246a86f39d498b8edff441c6ef 96 Pfam PF13744 Helix-turn-helix domain 14 86 2.7E-20 T 22-04-2016 APECO1_RS11450 214cd4246a86f39d498b8edff441c6ef 96 SUPERFAMILY SSF47413 19 87 5.9E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS11450 214cd4246a86f39d498b8edff441c6ef 96 Gene3D G3DSA:1.10.260.40 19 82 2.2E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS00570 8741296e316e5c3f2bf6110c94605a04 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS00570 8741296e316e5c3f2bf6110c94605a04 146 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 5.0E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS00570 8741296e316e5c3f2bf6110c94605a04 146 Gene3D G3DSA:3.30.700.10 7 135 8.5E-33 T 22-04-2016 APECO1_RS00570 8741296e316e5c3f2bf6110c94605a04 146 SUPERFAMILY SSF54523 7 113 4.76E-23 T 22-04-2016 APECO1_RS00570 8741296e316e5c3f2bf6110c94605a04 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.8E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APECO1_RS00570 8741296e316e5c3f2bf6110c94605a04 146 PANTHER PTHR30093 1 85 8.2E-27 T 22-04-2016 APECO1_RS20755 85fa225a4c7c6e4cd391e05235745557 340 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 1 332 3.5E-179 T 22-04-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative KEGG: 00231+2.-.-.-|UniPathway: UPA00958 APECO1_RS20755 85fa225a4c7c6e4cd391e05235745557 340 Gene3D G3DSA:3.40.50.2000 2 142 1.2E-34 T 22-04-2016 APECO1_RS20755 85fa225a4c7c6e4cd391e05235745557 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 66 314 3.7E-66 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APECO1_RS20755 85fa225a4c7c6e4cd391e05235745557 340 PANTHER PTHR30160:SF1 5 312 5.4E-92 T 22-04-2016 APECO1_RS20755 85fa225a4c7c6e4cd391e05235745557 340 SUPERFAMILY SSF53756 3 332 9.11E-78 T 22-04-2016 APECO1_RS20755 85fa225a4c7c6e4cd391e05235745557 340 Gene3D G3DSA:3.40.50.2000 159 331 1.3E-48 T 22-04-2016 APECO1_RS20755 85fa225a4c7c6e4cd391e05235745557 340 PANTHER PTHR30160 5 312 5.4E-92 T 22-04-2016 APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.9E-127 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 Gene3D G3DSA:3.40.50.1100 2 39 4.1E-81 T 22-04-2016 APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 Gene3D G3DSA:3.40.50.1100 146 297 4.1E-81 T 22-04-2016 APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 PANTHER PTHR10314:SF100 3 295 6.0E-195 T 22-04-2016 APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 PANTHER PTHR10314 3 295 6.0E-195 T 22-04-2016 APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 3.5E-170 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 Gene3D G3DSA:3.40.50.1100 40 139 8.3E-40 T 22-04-2016 APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 1.9E-69 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS13625 2bc08bcb10778ce42f0ad19023e7f428 303 SUPERFAMILY SSF53686 4 289 5.11E-93 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 PANTHER PTHR11606 1 447 1.2E-250 T 22-04-2016 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 2.46E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 2.46E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 2.46E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 2.46E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:1.10.285.10 373 446 6.6E-26 T 22-04-2016 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:1.10.285.10 7 67 5.2E-28 T 22-04-2016 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 2.5E-87 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 SUPERFAMILY SSF51735 202 446 7.67E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 PANTHER PTHR11606:SF4 1 447 1.2E-250 T 22-04-2016 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:3.40.50.720 209 372 1.5E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 SMART SM00839 204 445 1.4E-93 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 7.1E-49 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 SUPERFAMILY SSF53223 6 196 6.4E-74 T 22-04-2016 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 PIRSF PIRSF000185 22 447 1.6E-114 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 APECO1_RS09435 ee572cb4202207749c31ae7a00d68cb5 447 Gene3D G3DSA:3.40.192.10 68 188 8.2E-61 T 22-04-2016 APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 SUPERFAMILY SSF52540 247 483 7.08E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 SMART SM00382 277 472 2.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 SMART SM00382 29 219 1.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 PANTHER PTHR24220 6 378 3.2E-216 T 22-04-2016 APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 SUPERFAMILY SSF52540 4 231 1.81E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 Gene3D G3DSA:3.40.50.300 2 235 8.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 PANTHER PTHR24220:SF416 6 378 3.2E-216 T 22-04-2016 APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 Pfam PF00005 ABC transporter 22 169 1.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 Pfam PF00005 ABC transporter 269 423 1.2E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS21385 4bd5b0365ae698f04b189a3e42f22044 501 Gene3D G3DSA:3.40.50.300 267 490 1.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 Gene3D G3DSA:3.40.50.300 2 227 5.9E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 Gene3D G3DSA:3.40.50.300 324 552 2.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 SMART SM00382 354 535 6.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 SMART SM00382 32 266 7.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 SUPERFAMILY SSF52540 324 549 4.35E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 SUPERFAMILY SSF52540 5 226 4.42E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 PANTHER PTHR24220:SF546 345 449 0.0 T 22-04-2016 APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 PANTHER PTHR24220:SF546 7 240 0.0 T 22-04-2016 APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 PANTHER PTHR24220:SF546 268 300 0.0 T 22-04-2016 APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 PANTHER PTHR24220 345 449 0.0 T 22-04-2016 APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 PANTHER PTHR24220 7 240 0.0 T 22-04-2016 APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 PANTHER PTHR24220 268 300 0.0 T 22-04-2016 APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 Pfam PF00005 ABC transporter 26 165 3.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS03850 0965ef1ef2e578ba494e1cef76999a3e 578 Pfam PF00005 ABC transporter 346 489 9.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS07695 2a8310e59a2f086863536a64722f343b 232 Pfam PF05100 Phage minor tail protein L 29 230 4.3E-97 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS07695 2a8310e59a2f086863536a64722f343b 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 8.4E-99 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS04450 602ca04b7579d8d4de3042ca117d37b7 74 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APECO1_RS04450 602ca04b7579d8d4de3042ca117d37b7 74 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 1.3E-22 T 22-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type APECO1_RS04450 602ca04b7579d8d4de3042ca117d37b7 74 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 64 2.0E-11 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APECO1_RS04450 602ca04b7579d8d4de3042ca117d37b7 74 SUPERFAMILY SSF57716 34 71 4.99E-9 T 22-04-2016 APECO1_RS04450 602ca04b7579d8d4de3042ca117d37b7 74 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 4.1E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APECO1_RS04450 602ca04b7579d8d4de3042ca117d37b7 74 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 4.1E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APECO1_RS04450 602ca04b7579d8d4de3042ca117d37b7 74 PANTHER PTHR38777 1 70 7.1E-19 T 22-04-2016 APECO1_RS04450 602ca04b7579d8d4de3042ca117d37b7 74 PANTHER PTHR38777:SF1 1 70 7.1E-19 T 22-04-2016 APECO1_RS18235 4e2dfad1b182133235e0bdda1a5539a3 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS18235 4e2dfad1b182133235e0bdda1a5539a3 331 PANTHER PTHR30217:SF3 240 330 2.7E-227 T 22-04-2016 APECO1_RS18235 4e2dfad1b182133235e0bdda1a5539a3 331 PANTHER PTHR30217:SF3 1 218 2.7E-227 T 22-04-2016 APECO1_RS18235 4e2dfad1b182133235e0bdda1a5539a3 331 Pfam PF01136 Peptidase family U32 76 330 4.3E-67 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS18235 4e2dfad1b182133235e0bdda1a5539a3 331 PANTHER PTHR30217 240 330 2.7E-227 T 22-04-2016 APECO1_RS18235 4e2dfad1b182133235e0bdda1a5539a3 331 PANTHER PTHR30217 1 218 2.7E-227 T 22-04-2016 APECO1_RS18235 4e2dfad1b182133235e0bdda1a5539a3 331 SUPERFAMILY SSF51391 11 162 1.41E-5 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS19395 b3b96a1a20cf0f0390339f71c09350fe 428 Gene3D G3DSA:3.30.70.1070 343 407 4.6E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APECO1_RS19395 b3b96a1a20cf0f0390339f71c09350fe 428 SUPERFAMILY SSF110997 344 408 4.45E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APECO1_RS19395 b3b96a1a20cf0f0390339f71c09350fe 428 Pfam PF05036 Sporulation related domain 345 417 1.3E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APECO1_RS19395 b3b96a1a20cf0f0390339f71c09350fe 428 Hamap MF_02021 Cell division protein DamX [damX]. 1 428 25.165 T 22-04-2016 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 APECO1_RS22775 a94b9c4c7fec180e2ff54c75b3bc6ed6 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 19.954 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS22775 a94b9c4c7fec180e2ff54c75b3bc6ed6 211 SUPERFAMILY SSF51391 6 205 4.32E-64 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS22775 a94b9c4c7fec180e2ff54c75b3bc6ed6 211 PANTHER PTHR20857 2 207 8.3E-72 T 22-04-2016 APECO1_RS22775 a94b9c4c7fec180e2ff54c75b3bc6ed6 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 7.4E-59 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS22775 a94b9c4c7fec180e2ff54c75b3bc6ed6 211 Gene3D G3DSA:3.20.20.70 5 204 1.0E-67 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS22775 a94b9c4c7fec180e2ff54c75b3bc6ed6 211 Pfam PF02581 Thiamine monophosphate synthase/TENI 20 189 3.3E-56 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APECO1_RS02530 057c039d5e1ce6bca6144cf710d89113 259 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 6 251 1.6E-115 T 22-04-2016 IPR005226 UPF0014 family APECO1_RS02530 057c039d5e1ce6bca6144cf710d89113 259 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 9.9E-83 T 22-04-2016 IPR005226 UPF0014 family APECO1_RS02530 057c039d5e1ce6bca6144cf710d89113 259 PANTHER PTHR30028:SF0 1 259 1.1E-98 T 22-04-2016 IPR005226 UPF0014 family APECO1_RS02530 057c039d5e1ce6bca6144cf710d89113 259 PANTHER PTHR30028 1 259 1.1E-98 T 22-04-2016 APECO1_RS11555 981e1db63ee815c3e3af8439737ddb0b 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS11555 981e1db63ee815c3e3af8439737ddb0b 453 PANTHER PTHR30217:SF6 246 453 3.8E-246 T 22-04-2016 APECO1_RS11555 981e1db63ee815c3e3af8439737ddb0b 453 PANTHER PTHR30217:SF6 1 206 3.8E-246 T 22-04-2016 APECO1_RS11555 981e1db63ee815c3e3af8439737ddb0b 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 2.0E-21 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS11555 981e1db63ee815c3e3af8439737ddb0b 453 Pfam PF01136 Peptidase family U32 75 343 4.9E-97 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS11555 981e1db63ee815c3e3af8439737ddb0b 453 PANTHER PTHR30217 246 453 3.8E-246 T 22-04-2016 APECO1_RS11555 981e1db63ee815c3e3af8439737ddb0b 453 PANTHER PTHR30217 1 206 3.8E-246 T 22-04-2016 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 SMART SM00283 269 516 4.9E-96 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 SUPERFAMILY SSF47170 25 181 2.49E-52 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 SUPERFAMILY SSF58104 236 520 9.55E-76 T 22-04-2016 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 PANTHER PTHR32089 38 519 2.4E-209 T 22-04-2016 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 1.3E-68 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 2.1E-92 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.1E-92 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.1E-92 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.1E-92 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.1E-92 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 2.1E-92 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.1E-92 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 SMART SM00304 216 268 6.7E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 SMART SM00319 44 182 4.1E-70 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 Gene3D G3DSA:1.10.287.950 284 488 2.1E-63 T 22-04-2016 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 PANTHER PTHR32089:SF48 38 519 2.4E-209 T 22-04-2016 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 Gene3D G3DSA:1.20.120.30 35 181 1.3E-62 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 Pfam PF02203 Tar ligand binding domain homologue 1 176 5.0E-58 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APECO1_RS25095 7c3c279340ba2a8e1377990b985aec84 551 Pfam PF00672 HAMP domain 196 263 1.3E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS02300 6ecfa8cf3b7c5449f6cd8b6d1efdcfe2 286 Gene3D G3DSA:3.10.129.10 5 116 7.4E-50 T 22-04-2016 IPR029069 HotDog domain APECO1_RS02300 6ecfa8cf3b7c5449f6cd8b6d1efdcfe2 286 PANTHER PTHR11066:SF34 1 283 1.5E-117 T 22-04-2016 APECO1_RS02300 6ecfa8cf3b7c5449f6cd8b6d1efdcfe2 286 SUPERFAMILY SSF54637 116 284 1.22E-58 T 22-04-2016 IPR029069 HotDog domain APECO1_RS02300 6ecfa8cf3b7c5449f6cd8b6d1efdcfe2 286 Gene3D G3DSA:3.10.129.10 125 284 4.3E-56 T 22-04-2016 IPR029069 HotDog domain APECO1_RS02300 6ecfa8cf3b7c5449f6cd8b6d1efdcfe2 286 SUPERFAMILY SSF54637 5 114 1.92E-42 T 22-04-2016 IPR029069 HotDog domain APECO1_RS02300 6ecfa8cf3b7c5449f6cd8b6d1efdcfe2 286 Pfam PF13622 Thioesterase-like superfamily 32 282 1.8E-58 T 22-04-2016 APECO1_RS02300 6ecfa8cf3b7c5449f6cd8b6d1efdcfe2 286 PANTHER PTHR11066 1 283 1.5E-117 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 APECO1_RS02300 6ecfa8cf3b7c5449f6cd8b6d1efdcfe2 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.0E-105 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 APECO1_RS20120 c63df2d6fa215d9a94c1d1e7e43a60d9 110 PIRSF PIRSF009564 1 107 8.4E-60 T 22-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 APECO1_RS20120 c63df2d6fa215d9a94c1d1e7e43a60d9 110 Hamap MF_00946 Acid stress chaperone HdeA [hdeA]. 1 106 35.189 T 22-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 APECO1_RS20120 c63df2d6fa215d9a94c1d1e7e43a60d9 110 SUPERFAMILY SSF47752 30 108 2.48E-43 T 22-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 APECO1_RS20120 c63df2d6fa215d9a94c1d1e7e43a60d9 110 Pfam PF06411 HdeA/HdeB family 12 96 5.1E-27 T 22-04-2016 IPR010486 HNS-dependent expression A/B APECO1_RS20120 c63df2d6fa215d9a94c1d1e7e43a60d9 110 ProDom PD065392 HDEA PRECURSOR SIGNAL PERIPLASMIC 3D-STRUCTURE DIRECT 10K-S SEQUENCING 38 108 2.0E-34 T 22-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 APECO1_RS20120 c63df2d6fa215d9a94c1d1e7e43a60d9 110 Gene3D G3DSA:1.10.890.10 22 110 1.3E-42 T 22-04-2016 IPR010486 HNS-dependent expression A/B APECO1_RS02305 b07e61a211cd339d73ef424fe70b80af 190 PANTHER PTHR38013 1 190 5.1E-62 T 22-04-2016 APECO1_RS02305 b07e61a211cd339d73ef424fe70b80af 190 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 46 150 5.9E-42 T 22-04-2016 APECO1_RS03725 395fd1722261cade9f0faf7819042e68 477 PANTHER PTHR10283:SF89 1 477 8.0E-282 T 22-04-2016 APECO1_RS03725 395fd1722261cade9f0faf7819042e68 477 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 468 8.2E-167 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS03725 395fd1722261cade9f0faf7819042e68 477 PIRSF PIRSF002457 1 474 4.7E-150 T 22-04-2016 IPR030676 Citrate carrier CitT-related APECO1_RS03725 395fd1722261cade9f0faf7819042e68 477 PANTHER PTHR10283 1 477 8.0E-282 T 22-04-2016 APECO1_RS03725 395fd1722261cade9f0faf7819042e68 477 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 474 4.1E-183 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS25050 2f4edf029fdb0f7be9eb33a38b029085 113 Hamap MF_01193 Endoribonuclease SymE [symE]. 1 110 44.141 T 22-04-2016 IPR020883 Type I toxin-antitoxin system, SymE toxin GO:0003723|GO:0004521|GO:0005737|GO:0016070 APECO1_RS25050 2f4edf029fdb0f7be9eb33a38b029085 113 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 20 71 1.0E-19 T 22-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 APECO1_RS00595 d9d63dc3a499e65f8326e92d4c6a9a12 456 PANTHER PTHR11785:SF26 1 448 0.0 T 22-04-2016 APECO1_RS00595 d9d63dc3a499e65f8326e92d4c6a9a12 456 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APECO1_RS00595 d9d63dc3a499e65f8326e92d4c6a9a12 456 PIRSF PIRSF006060 1 452 1.6E-81 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS00595 d9d63dc3a499e65f8326e92d4c6a9a12 456 PANTHER PTHR11785 1 448 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS00595 d9d63dc3a499e65f8326e92d4c6a9a12 456 Pfam PF00324 Amino acid permease 18 453 5.5E-132 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 PANTHER PTHR23133:SF2 10 97 3.0E-187 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 PANTHER PTHR23133:SF2 163 355 3.0E-187 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 5.1E-26 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 SUPERFAMILY SSF54211 167 251 1.07E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 SUPERFAMILY SSF54211 252 342 1.39E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 SUPERFAMILY SSF56784 1 158 9.63E-41 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.706 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 PANTHER PTHR23133 10 97 3.0E-187 T 22-04-2016 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 PANTHER PTHR23133 163 355 3.0E-187 T 22-04-2016 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 58.285 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 6.1E-46 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 2.6E-83 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 Gene3D G3DSA:3.30.230.40 172 253 3.0E-38 T 22-04-2016 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.0E-64 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 Gene3D G3DSA:3.30.230.40 258 355 5.5E-32 T 22-04-2016 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 Pfam PF13242 HAD-hyrolase-like 103 145 6.7E-6 T 22-04-2016 APECO1_RS11245 9f13b5ebe8d7c481b554dbac01d02236 355 Gene3D G3DSA:3.40.50.1000 1 171 8.9E-43 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 PANTHER PTHR18966 26 253 2.4E-168 T 22-04-2016 APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 SMART SM00062 27 256 3.5E-79 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 SUPERFAMILY SSF53850 26 257 1.15E-65 T 22-04-2016 APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 PANTHER PTHR18966:SF227 26 253 2.4E-168 T 22-04-2016 APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 1.2E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 Gene3D G3DSA:3.40.190.10 116 213 2.2E-32 T 22-04-2016 APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 4.9E-101 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 Gene3D G3DSA:3.40.190.10 26 113 8.9E-45 T 22-04-2016 APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 Gene3D G3DSA:3.40.190.10 215 257 8.9E-45 T 22-04-2016 APECO1_RS12835 0fc8b29bf8f51c2a9407aba584499abc 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 86 106 3.7E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 128 149 3.7E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 107 127 3.7E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 44 64 3.7E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 23 43 3.7E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 65 85 3.7E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PRINTS PR00601 Bacterioferritin signature 3 22 3.7E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 SUPERFAMILY SSF47240 1 157 1.35E-54 T 22-04-2016 IPR009078 Ferritin-like superfamily APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PIRSF PIRSF002560 1 157 6.8E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PANTHER PTHR30295:SF9 1 156 1.7E-51 T 22-04-2016 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 Gene3D G3DSA:1.20.1260.10 1 156 4.8E-67 T 22-04-2016 IPR012347 Ferritin-related APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 Pfam PF00210 Ferritin-like domain 8 144 7.8E-40 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.6E-84 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APECO1_RS19155 41794e2f15274aa8e594ce47f97a857d 158 PANTHER PTHR30295 1 156 1.7E-51 T 22-04-2016 APECO1_RS17135 33a012b0328cf51d946036d5ad743fb3 246 Gene3D G3DSA:3.90.550.10 3 240 1.2E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS17135 33a012b0328cf51d946036d5ad743fb3 246 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 239 40.523 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APECO1_RS17135 33a012b0328cf51d946036d5ad743fb3 246 SUPERFAMILY SSF53448 4 244 2.01E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS17135 33a012b0328cf51d946036d5ad743fb3 246 PANTHER PTHR21485:SF4 2 241 1.1E-98 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APECO1_RS17135 33a012b0328cf51d946036d5ad743fb3 246 PANTHER PTHR21485 2 241 1.1E-98 T 22-04-2016 APECO1_RS17135 33a012b0328cf51d946036d5ad743fb3 246 Pfam PF02348 Cytidylyltransferase 5 212 5.9E-53 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APECO1_RS17135 33a012b0328cf51d946036d5ad743fb3 246 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 5 231 1.9E-63 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APECO1_RS24070 20fde03ece91131961c278aac4e36553 191 PANTHER PTHR30055:SF92 3 189 1.3E-43 T 22-04-2016 APECO1_RS24070 20fde03ece91131961c278aac4e36553 191 SUPERFAMILY SSF48498 86 179 1.08E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS24070 20fde03ece91131961c278aac4e36553 191 Gene3D G3DSA:1.10.357.10 2 179 6.0E-18 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS24070 20fde03ece91131961c278aac4e36553 191 SUPERFAMILY SSF46689 3 69 9.75E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS24070 20fde03ece91131961c278aac4e36553 191 PANTHER PTHR30055 3 189 1.3E-43 T 22-04-2016 APECO1_RS11620 c2348f4a1f88b6001216d946727e32a8 165 PANTHER PTHR35862:SF1 1 165 5.6E-81 T 22-04-2016 APECO1_RS11620 c2348f4a1f88b6001216d946727e32a8 165 PANTHER PTHR35862 1 165 5.6E-81 T 22-04-2016 APECO1_RS11620 c2348f4a1f88b6001216d946727e32a8 165 Pfam PF04865 Baseplate J-like protein 1 124 1.6E-19 T 22-04-2016 IPR006949 Baseplate protein J-like APECO1_RS04135 f1746f3f2aa85f1e31caaafa5b00ba1e 240 Gene3D G3DSA:3.40.109.10 2 239 4.9E-75 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APECO1_RS04135 f1746f3f2aa85f1e31caaafa5b00ba1e 240 Pfam PF00881 Nitroreductase family 11 159 4.1E-17 T 22-04-2016 IPR029479 Nitroreductase APECO1_RS04135 f1746f3f2aa85f1e31caaafa5b00ba1e 240 PANTHER PTHR23026 1 185 3.9E-78 T 22-04-2016 APECO1_RS04135 f1746f3f2aa85f1e31caaafa5b00ba1e 240 PIRSF PIRSF005426 1 240 6.9E-83 T 22-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 APECO1_RS04135 f1746f3f2aa85f1e31caaafa5b00ba1e 240 SUPERFAMILY SSF55469 1 239 3.53E-74 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APECO1_RS04135 f1746f3f2aa85f1e31caaafa5b00ba1e 240 PANTHER PTHR23026:SF98 1 185 3.9E-78 T 22-04-2016 APECO1_RS01275 ac8cdffef297f9dda3880c26dcc2c893 148 SUPERFAMILY SSF89872 22 147 9.42E-50 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 APECO1_RS01275 ac8cdffef297f9dda3880c26dcc2c893 148 PIRSF PIRSF009103 1 145 4.3E-54 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 APECO1_RS01275 ac8cdffef297f9dda3880c26dcc2c893 148 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 30 143 9.6E-35 T 22-04-2016 APECO1_RS01275 ac8cdffef297f9dda3880c26dcc2c893 148 Gene3D G3DSA:3.40.1420.10 20 148 2.7E-57 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 APECO1_RS22450 731c78734cdc112dbc7eb431505c5fea 202 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 21 193 2.4E-52 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family APECO1_RS22450 731c78734cdc112dbc7eb431505c5fea 202 SUPERFAMILY SSF54001 19 195 6.28E-51 T 22-04-2016 APECO1_RS22450 731c78734cdc112dbc7eb431505c5fea 202 Gene3D G3DSA:2.30.30.330 19 197 1.9E-62 T 22-04-2016 APECO1_RS14375 e45de50a3ad3cd1d68f4d20f9802f4fa 426 SUPERFAMILY SSF63520 231 333 3.66E-15 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS14375 e45de50a3ad3cd1d68f4d20f9802f4fa 426 Pfam PF00874 PRD domain 131 216 2.3E-9 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS14375 e45de50a3ad3cd1d68f4d20f9802f4fa 426 Pfam PF00874 PRD domain 240 328 4.6E-11 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS14375 e45de50a3ad3cd1d68f4d20f9802f4fa 426 Gene3D G3DSA:1.10.1790.10 231 332 1.7E-15 T 22-04-2016 IPR011608 PRD domain GO:0006355 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 PANTHER PTHR10772 1 96 6.9E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 Gene3D G3DSA:2.30.33.40 1 96 1.2E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.8E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 SMART SM00883 2 95 4.3E-50 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.9E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.9E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.9E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 SUPERFAMILY SSF50129 1 96 1.29E-31 T 22-04-2016 IPR011032 GroES-like APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 APECO1_RS24105 14aed608b903e87469e861e7f4f44d91 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.098 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APECO1_RS07885 5d25478bb23fce843d09093c8bd5d0b6 479 Pfam PF00171 Aldehyde dehydrogenase family 22 475 2.9E-166 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS07885 5d25478bb23fce843d09093c8bd5d0b6 479 Gene3D G3DSA:3.40.605.10 5 264 8.0E-92 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS07885 5d25478bb23fce843d09093c8bd5d0b6 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS07885 5d25478bb23fce843d09093c8bd5d0b6 479 PANTHER PTHR11699:SF46 1 478 8.7E-213 T 22-04-2016 APECO1_RS07885 5d25478bb23fce843d09093c8bd5d0b6 479 Gene3D G3DSA:3.40.309.10 265 439 5.3E-67 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS07885 5d25478bb23fce843d09093c8bd5d0b6 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS07885 5d25478bb23fce843d09093c8bd5d0b6 479 PANTHER PTHR11699 1 478 8.7E-213 T 22-04-2016 APECO1_RS07885 5d25478bb23fce843d09093c8bd5d0b6 479 SUPERFAMILY SSF53720 4 477 1.44E-159 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS22195 770bdfbee1d0a69009cd1b7c26b3fe13 96 SUPERFAMILY SSF47413 36 90 6.97E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS22195 770bdfbee1d0a69009cd1b7c26b3fe13 96 PANTHER PTHR36511:SF2 1 94 3.6E-20 T 22-04-2016 APECO1_RS22195 770bdfbee1d0a69009cd1b7c26b3fe13 96 PANTHER PTHR36511 1 94 3.6E-20 T 22-04-2016 APECO1_RS22195 770bdfbee1d0a69009cd1b7c26b3fe13 96 SMART SM00530 36 90 3.2E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS22195 770bdfbee1d0a69009cd1b7c26b3fe13 96 Pfam PF13560 Helix-turn-helix domain 37 81 2.2E-9 T 22-04-2016 APECO1_RS22195 770bdfbee1d0a69009cd1b7c26b3fe13 96 Gene3D G3DSA:1.10.260.40 36 91 2.6E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS02175 7ba247f6aae85322bcab997916430760 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 18.069 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APECO1_RS02175 7ba247f6aae85322bcab997916430760 296 Pfam PF01040 UbiA prenyltransferase family 19 265 1.3E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APECO1_RS02175 7ba247f6aae85322bcab997916430760 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 1.3E-91 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APECO1_RS02175 7ba247f6aae85322bcab997916430760 296 PANTHER PTHR11048:SF20 1 288 2.0E-163 T 22-04-2016 APECO1_RS02175 7ba247f6aae85322bcab997916430760 296 PANTHER PTHR11048 1 288 2.0E-163 T 22-04-2016 APECO1_RS02175 7ba247f6aae85322bcab997916430760 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site APECO1_RS00615 a8820eba0e66cc9308833646a3fd1f76 96 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 5 93 2.9E-26 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 APECO1_RS00615 a8820eba0e66cc9308833646a3fd1f76 96 SUPERFAMILY SSF47345 3 94 1.16E-31 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 APECO1_RS00615 a8820eba0e66cc9308833646a3fd1f76 96 Gene3D G3DSA:1.10.1200.20 3 94 1.2E-33 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 APECO1_RS00615 a8820eba0e66cc9308833646a3fd1f76 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 5 23 1.6E-9 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 APECO1_RS00615 a8820eba0e66cc9308833646a3fd1f76 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 72 93 1.6E-9 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 APECO1_RS00615 a8820eba0e66cc9308833646a3fd1f76 96 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 10 93 9.0E-44 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 APECO1_RS24460 e0d004fe0f805d6afe46250b526cc71c 282 SUPERFAMILY SSF51658 1 220 1.31E-40 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24460 e0d004fe0f805d6afe46250b526cc71c 282 PANTHER PTHR12110:SF27 4 225 1.0E-54 T 22-04-2016 APECO1_RS24460 e0d004fe0f805d6afe46250b526cc71c 282 Gene3D G3DSA:3.20.20.150 11 225 7.1E-37 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24460 e0d004fe0f805d6afe46250b526cc71c 282 Pfam PF01261 Xylose isomerase-like TIM barrel 29 228 4.1E-24 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS24460 e0d004fe0f805d6afe46250b526cc71c 282 PANTHER PTHR12110 4 225 1.0E-54 T 22-04-2016 APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 Gene3D G3DSA:3.40.50.140 135 171 0.001 T 22-04-2016 IPR006171 Toprim domain APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 SMART SM00493 81 166 2.1E-20 T 22-04-2016 IPR006171 Toprim domain APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 PANTHER PTHR30446:SF0 1 201 8.6E-122 T 22-04-2016 APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 104.67 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 SUPERFAMILY SSF111304 2 199 7.98E-73 T 22-04-2016 IPR023627 Recombination protein RecR APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 Pfam PF13662 Toprim domain 82 172 1.7E-24 T 22-04-2016 IPR006171 Toprim domain APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 3.9E-85 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 PANTHER PTHR30446 1 201 8.6E-122 T 22-04-2016 APECO1_RS02400 90556cceaea882a61285fd22312b2d34 201 Pfam PF02132 RecR protein 41 77 2.0E-15 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger APECO1_RS04840 23087ccec267696b61879e8f64990421 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 180 7.7E-40 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component APECO1_RS04840 23087ccec267696b61879e8f64990421 187 SUPERFAMILY SSF159594 24 184 4.18E-28 T 22-04-2016 APECO1_RS04840 23087ccec267696b61879e8f64990421 187 Gene3D G3DSA:3.40.50.10610 14 181 5.2E-14 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 Pfam PF01782 RimM N-terminal domain 16 97 6.6E-27 T 22-04-2016 IPR002676 RimM protein GO:0006364 APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 SUPERFAMILY SSF50346 106 182 1.63E-19 T 22-04-2016 IPR011033 PRC-barrel-like APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 8.9E-63 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 Gene3D G3DSA:2.30.30.240 106 182 2.8E-29 T 22-04-2016 APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 PANTHER PTHR33692:SF1 12 180 8.3E-66 T 22-04-2016 APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 PANTHER PTHR33692 12 180 8.3E-66 T 22-04-2016 APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 Gene3D G3DSA:2.40.30.60 6 100 1.3E-36 T 22-04-2016 IPR002676 RimM protein GO:0006364 APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 Pfam PF05239 PRC-barrel domain 104 177 1.7E-9 T 22-04-2016 IPR027275 PRC-barrel domain APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.865 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APECO1_RS14770 c07d27980fe1955e3a121e88359a12bc 182 SUPERFAMILY SSF50447 12 100 4.59E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS08315 8ac65a9dd5bc9662735537cedb692178 260 SUPERFAMILY SSF51735 1 223 3.55E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08315 8ac65a9dd5bc9662735537cedb692178 260 Gene3D G3DSA:3.40.50.720 1 206 6.1E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08315 8ac65a9dd5bc9662735537cedb692178 260 PANTHER PTHR14194 1 227 2.4E-32 T 22-04-2016 APECO1_RS08315 8ac65a9dd5bc9662735537cedb692178 260 Pfam PF13460 NAD(P)H-binding 7 194 1.3E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS04780 2d92ee749640c37c2ac9d75cdac8adf4 255 Pfam PF00005 ABC transporter 27 160 2.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS04780 2d92ee749640c37c2ac9d75cdac8adf4 255 Gene3D G3DSA:3.40.50.300 12 212 2.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04780 2d92ee749640c37c2ac9d75cdac8adf4 255 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS04780 2d92ee749640c37c2ac9d75cdac8adf4 255 SMART SM00382 36 210 2.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS04780 2d92ee749640c37c2ac9d75cdac8adf4 255 PANTHER PTHR24220:SF365 13 244 1.2E-144 T 22-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 APECO1_RS04780 2d92ee749640c37c2ac9d75cdac8adf4 255 SUPERFAMILY SSF52540 13 213 6.27E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04780 2d92ee749640c37c2ac9d75cdac8adf4 255 PANTHER PTHR24220 13 244 1.2E-144 T 22-04-2016 APECO1_RS18025 668b2ee40702b57511ac0254982bbf50 233 PANTHER PTHR13903:SF14 1 233 3.1E-176 T 22-04-2016 APECO1_RS18025 668b2ee40702b57511ac0254982bbf50 233 PANTHER PTHR13903 1 233 3.1E-176 T 22-04-2016 IPR012093 Pirin APECO1_RS18025 668b2ee40702b57511ac0254982bbf50 233 PIRSF PIRSF006232 1 230 1.0E-32 T 22-04-2016 IPR012093 Pirin APECO1_RS18025 668b2ee40702b57511ac0254982bbf50 233 Gene3D G3DSA:2.60.120.10 3 231 4.6E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS18025 668b2ee40702b57511ac0254982bbf50 233 SUPERFAMILY SSF51182 1 231 9.75E-45 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS18025 668b2ee40702b57511ac0254982bbf50 233 Pfam PF02678 Pirin 4 119 4.4E-23 T 22-04-2016 IPR003829 Pirin, N-terminal domain APECO1_RS09895 761d1d05f18fac9c0e78208fd8a3f517 118 Hamap MF_01435 Protein YebF [yebF]. 1 118 37.737 T 22-04-2016 IPR020236 Uncharacterised protein family YebF APECO1_RS09895 761d1d05f18fac9c0e78208fd8a3f517 118 Pfam PF13995 YebF-like protein 28 116 1.5E-40 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein APECO1_RS09895 761d1d05f18fac9c0e78208fd8a3f517 118 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 20 118 3.0E-53 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein APECO1_RS15830 0a57d2f17cdb9721da5fddfc10686102 260 PANTHER PTHR11079:SF60 3 245 4.5E-94 T 22-04-2016 APECO1_RS15830 0a57d2f17cdb9721da5fddfc10686102 260 PANTHER PTHR11079 3 245 4.5E-94 T 22-04-2016 APECO1_RS15830 0a57d2f17cdb9721da5fddfc10686102 260 Pfam PF00849 RNA pseudouridylate synthase 11 170 1.4E-28 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS15830 0a57d2f17cdb9721da5fddfc10686102 260 SUPERFAMILY SSF55120 2 238 2.4E-61 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS15830 0a57d2f17cdb9721da5fddfc10686102 260 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS19635 c0134d7bafbcd492a4112ccec14dbc24 234 SUPERFAMILY SSF49401 61 234 3.23E-22 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS19635 c0134d7bafbcd492a4112ccec14dbc24 234 PANTHER PTHR33420 51 234 3.3E-23 T 22-04-2016 APECO1_RS19635 c0134d7bafbcd492a4112ccec14dbc24 234 Gene3D G3DSA:2.60.40.1090 60 234 2.8E-26 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS19635 c0134d7bafbcd492a4112ccec14dbc24 234 Pfam PF00419 Fimbrial protein 63 233 2.7E-17 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS19635 c0134d7bafbcd492a4112ccec14dbc24 234 PANTHER PTHR33420:SF1 51 234 3.3E-23 T 22-04-2016 APECO1_RS04970 eb7a72034a2b9ce5e7e799ab2b34b713 132 SUPERFAMILY SSF52833 5 130 4.49E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS04970 eb7a72034a2b9ce5e7e799ab2b34b713 132 Pfam PF07449 Hydrogenase-1 expression protein HyaE 10 116 2.6E-43 T 22-04-2016 IPR010893 [NiFe]-hydrogenase maturation factor HyaE APECO1_RS04970 eb7a72034a2b9ce5e7e799ab2b34b713 132 Gene3D G3DSA:3.40.30.10 19 101 4.5E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS21185 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 SUPERFAMILY SSF53383 6 471 1.94E-128 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS21185 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 22-04-2016 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1|UniPathway: UPA00332 APECO1_RS21185 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 PIRSF PIRSF001386 3 471 5.2E-202 T 22-04-2016 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 APECO1_RS21185 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 0.0 T 22-04-2016 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 APECO1_RS21185 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 Pfam PF01212 Beta-eliminating lyase 49 437 9.8E-92 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 APECO1_RS21185 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 PANTHER PTHR32325 1 471 7.7E-194 T 22-04-2016 APECO1_RS21185 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 102.324 T 22-04-2016 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 APECO1_RS21185 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 Gene3D G3DSA:3.90.1150.10 315 470 1.1E-63 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS21185 c1c007e5cd0f0bdd10897ed8ba9a91b9 471 Gene3D G3DSA:3.40.640.10 63 314 1.6E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS08395 45a87821a445ae8b2a8c436a1aae94e1 129 Gene3D G3DSA:1.10.10.60 65 126 1.1E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS08395 45a87821a445ae8b2a8c436a1aae94e1 129 SUPERFAMILY SSF46689 64 113 4.26E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS08395 45a87821a445ae8b2a8c436a1aae94e1 129 SUPERFAMILY SSF46689 12 61 1.03E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS08395 45a87821a445ae8b2a8c436a1aae94e1 129 PANTHER PTHR11019 1 118 1.2E-71 T 22-04-2016 APECO1_RS08395 45a87821a445ae8b2a8c436a1aae94e1 129 PANTHER PTHR11019:SF118 1 118 1.2E-71 T 22-04-2016 APECO1_RS08395 45a87821a445ae8b2a8c436a1aae94e1 129 Pfam PF12833 Helix-turn-helix domain 34 110 6.1E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS08395 45a87821a445ae8b2a8c436a1aae94e1 129 SMART SM00342 27 110 3.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS08395 45a87821a445ae8b2a8c436a1aae94e1 129 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 106 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS08395 45a87821a445ae8b2a8c436a1aae94e1 129 Gene3D G3DSA:1.10.10.60 7 64 5.2E-25 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS08055 739aff3a37ab5ac8943b59bc5326d345 353 Gene3D G3DSA:2.130.10.10 46 333 1.8E-36 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APECO1_RS08055 739aff3a37ab5ac8943b59bc5326d345 353 SUPERFAMILY SSF51004 37 337 6.15E-40 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APECO1_RS11325 7d54d9e8e389bb3e780b325019d51743 299 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 292 1.5E-97 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APECO1_RS11325 7d54d9e8e389bb3e780b325019d51743 299 PANTHER PTHR10491 1 295 1.4E-103 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APECO1_RS11325 7d54d9e8e389bb3e780b325019d51743 299 Gene3D G3DSA:3.90.25.10 221 283 1.2E-30 T 22-04-2016 APECO1_RS11325 7d54d9e8e389bb3e780b325019d51743 299 Gene3D G3DSA:3.90.25.10 172 184 1.2E-30 T 22-04-2016 APECO1_RS11325 7d54d9e8e389bb3e780b325019d51743 299 Pfam PF04321 RmlD substrate binding domain 1 293 5.5E-108 T 22-04-2016 IPR029903 RmlD-like substrate binding domain APECO1_RS11325 7d54d9e8e389bb3e780b325019d51743 299 SUPERFAMILY SSF51735 1 294 3.4E-103 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11325 7d54d9e8e389bb3e780b325019d51743 299 PANTHER PTHR10491:SF4 1 295 1.4E-103 T 22-04-2016 APECO1_RS11325 7d54d9e8e389bb3e780b325019d51743 299 Gene3D G3DSA:3.40.50.720 1 171 1.5E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS23460 6e24d11d27aedf912ed32766fc915492 226 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS23460 6e24d11d27aedf912ed32766fc915492 226 Pfam PF00005 ABC transporter 24 178 2.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23460 6e24d11d27aedf912ed32766fc915492 226 PANTHER PTHR24220 3 222 6.8E-133 T 22-04-2016 APECO1_RS23460 6e24d11d27aedf912ed32766fc915492 226 SUPERFAMILY SSF52540 2 222 1.36E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23460 6e24d11d27aedf912ed32766fc915492 226 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 218 5.7E-112 T 22-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 APECO1_RS23460 6e24d11d27aedf912ed32766fc915492 226 SMART SM00382 33 226 1.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23460 6e24d11d27aedf912ed32766fc915492 226 PANTHER PTHR24220:SF380 3 222 6.8E-133 T 22-04-2016 APECO1_RS23460 6e24d11d27aedf912ed32766fc915492 226 Gene3D G3DSA:3.40.50.300 1 220 3.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PANTHER PTHR11528 5 623 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 33.248 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PIRSF PIRSF002583 1 624 1.8E-220 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PANTHER PTHR11528:SF44 5 623 0.0 T 22-04-2016 APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 Gene3D G3DSA:3.30.565.10 5 238 5.7E-84 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 SUPERFAMILY SSF54211 230 485 2.12E-103 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 2.2E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 SUPERFAMILY SSF110942 510 623 1.7E-34 T 22-04-2016 APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 Pfam PF00183 Hsp90 protein 211 622 1.6E-124 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 SUPERFAMILY SSF55874 4 213 1.22E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 SMART SM00387 27 184 1.1E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 2.3E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 2.3E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 2.3E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 2.3E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 2.3E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 2.3E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 2.3E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APECO1_RS02405 fa6153103f887234adccc389efcbac86 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 APECO1_RS17900 bcbd7045350bbc23fe63ad5480db5a12 477 PANTHER PTHR11785:SF342 39 470 3.2E-88 T 22-04-2016 APECO1_RS17900 bcbd7045350bbc23fe63ad5480db5a12 477 PIRSF PIRSF006060 1 476 6.6E-54 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS17900 bcbd7045350bbc23fe63ad5480db5a12 477 Pfam PF13520 Amino acid permease 11 439 1.5E-30 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS17900 bcbd7045350bbc23fe63ad5480db5a12 477 PANTHER PTHR11785 39 470 3.2E-88 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS06640 8c585b7649d7ec529b4626aae11e8bee 179 PANTHER PTHR36917 1 178 1.2E-83 T 22-04-2016 APECO1_RS06640 8c585b7649d7ec529b4626aae11e8bee 179 Pfam PF04279 Intracellular septation protein A 1 175 1.7E-72 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 APECO1_RS06640 8c585b7649d7ec529b4626aae11e8bee 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.524 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 APECO1_RS06640 8c585b7649d7ec529b4626aae11e8bee 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 4.3E-75 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 APECO1_RS06640 8c585b7649d7ec529b4626aae11e8bee 179 PANTHER PTHR36917:SF1 1 178 1.2E-83 T 22-04-2016 APECO1_RS21605 d7fc85f03f44b4d71d6e5639f15f8cec 461 PANTHER PTHR11785:SF28 3 461 0.0 T 22-04-2016 APECO1_RS21605 d7fc85f03f44b4d71d6e5639f15f8cec 461 PANTHER PTHR11785 3 461 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS21605 d7fc85f03f44b4d71d6e5639f15f8cec 461 PIRSF PIRSF006060 1 461 9.7E-66 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS21605 d7fc85f03f44b4d71d6e5639f15f8cec 461 Pfam PF00324 Amino acid permease 16 442 2.4E-103 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APECO1_RS21605 d7fc85f03f44b4d71d6e5639f15f8cec 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APECO1_RS26475 ab30bf5b31b493a280424eec365a9bbe 159 PANTHER PTHR11670 22 159 4.3E-50 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS26475 ab30bf5b31b493a280424eec365a9bbe 159 Gene3D G3DSA:3.20.19.10 1 78 3.9E-30 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS26475 ab30bf5b31b493a280424eec365a9bbe 159 SUPERFAMILY SSF53732 97 158 5.1E-9 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS26475 ab30bf5b31b493a280424eec365a9bbe 159 Pfam PF06434 Aconitate hydratase 2 N-terminus 1 99 1.1E-36 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APECO1_RS26475 ab30bf5b31b493a280424eec365a9bbe 159 PANTHER PTHR11670:SF39 22 159 4.3E-50 T 22-04-2016 APECO1_RS26475 ab30bf5b31b493a280424eec365a9bbe 159 Gene3D G3DSA:3.30.499.10 120 159 2.1E-14 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APECO1_RS26475 ab30bf5b31b493a280424eec365a9bbe 159 SUPERFAMILY SSF52016 1 88 2.35E-23 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APECO1_RS24330 0f10b0adadfca062f872ff043943a953 212 Pfam PF06693 Protein of unknown function (DUF1190) 67 211 1.6E-19 T 22-04-2016 IPR009576 Biofilm formation YgiB APECO1_RS03040 557a0c145ae5be6f71c6987909ec672f 262 SUPERFAMILY SSF56317 1 254 1.57E-57 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APECO1_RS03040 557a0c145ae5be6f71c6987909ec672f 262 Pfam PF00795 Carbon-nitrogen hydrolase 3 245 2.0E-37 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APECO1_RS03040 557a0c145ae5be6f71c6987909ec672f 262 Gene3D G3DSA:3.60.110.10 2 256 8.8E-63 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APECO1_RS03040 557a0c145ae5be6f71c6987909ec672f 262 PANTHER PTHR23088:SF27 1 256 3.8E-83 T 22-04-2016 APECO1_RS03040 557a0c145ae5be6f71c6987909ec672f 262 PANTHER PTHR23088 1 256 3.8E-83 T 22-04-2016 APECO1_RS03040 557a0c145ae5be6f71c6987909ec672f 262 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site APECO1_RS13635 ded884cbdc1ad9162fd1f7548b7f6267 291 Gene3D G3DSA:1.10.3720.10 19 281 1.7E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS13635 ded884cbdc1ad9162fd1f7548b7f6267 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 1.9E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS13635 ded884cbdc1ad9162fd1f7548b7f6267 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 4.2E-112 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 APECO1_RS13635 ded884cbdc1ad9162fd1f7548b7f6267 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 275 7.3E-116 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APECO1_RS13635 ded884cbdc1ad9162fd1f7548b7f6267 291 PANTHER PTHR30406 1 283 9.3E-161 T 22-04-2016 APECO1_RS13635 ded884cbdc1ad9162fd1f7548b7f6267 291 PANTHER PTHR30406:SF1 1 283 9.3E-161 T 22-04-2016 APECO1_RS13635 ded884cbdc1ad9162fd1f7548b7f6267 291 SUPERFAMILY SSF161098 16 268 3.92E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS12805 9f066d4219fa86710b06b7f18a37d8ea 297 Gene3D G3DSA:3.90.25.10 199 248 1.5E-5 T 22-04-2016 APECO1_RS12805 9f066d4219fa86710b06b7f18a37d8ea 297 SUPERFAMILY SSF51735 1 296 1.78E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12805 9f066d4219fa86710b06b7f18a37d8ea 297 PANTHER PTHR11092 1 297 6.3E-154 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 APECO1_RS12805 9f066d4219fa86710b06b7f18a37d8ea 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 2.2E-22 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APECO1_RS12805 9f066d4219fa86710b06b7f18a37d8ea 297 Gene3D G3DSA:3.40.50.720 1 198 2.8E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS12805 9f066d4219fa86710b06b7f18a37d8ea 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 5.1E-19 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 APECO1_RS12805 9f066d4219fa86710b06b7f18a37d8ea 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 4.4E-109 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 APECO1_RS12805 9f066d4219fa86710b06b7f18a37d8ea 297 PANTHER PTHR11092:SF0 1 297 6.3E-154 T 22-04-2016 APECO1_RS01460 800293455dc15ca88200504e11556bc9 444 PANTHER PTHR30349 161 437 1.2E-14 T 22-04-2016 APECO1_RS01460 800293455dc15ca88200504e11556bc9 444 SUPERFAMILY SSF56349 124 406 4.12E-34 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS01460 800293455dc15ca88200504e11556bc9 444 Gene3D G3DSA:1.10.443.10 234 408 3.3E-23 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS01460 800293455dc15ca88200504e11556bc9 444 Gene3D G3DSA:1.10.150.130 137 203 2.5E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS01460 800293455dc15ca88200504e11556bc9 444 Pfam PF00589 Phage integrase family 236 407 2.6E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS02485 287d391c93e61aa26fd927f151e3ceeb 430 PIRSF PIRSF006060 1 429 1.9E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS02485 287d391c93e61aa26fd927f151e3ceeb 430 Pfam PF13520 Amino acid permease 13 395 1.6E-29 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS02485 287d391c93e61aa26fd927f151e3ceeb 430 PANTHER PTHR11785 3 428 1.1E-72 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS02485 287d391c93e61aa26fd927f151e3ceeb 430 PANTHER PTHR11785:SF342 3 428 1.1E-72 T 22-04-2016 APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 Pfam PF13614 AAA domain 538 653 1.3E-12 T 22-04-2016 IPR025669 AAA domain APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 SUPERFAMILY SSF52540 527 707 1.37E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 PANTHER PTHR32309:SF17 185 720 0.0 T 22-04-2016 APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 PANTHER PTHR32309:SF17 1 123 0.0 T 22-04-2016 APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 508 711 5.8E-48 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 Gene3D G3DSA:3.40.50.300 527 706 1.6E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 PANTHER PTHR32309 185 720 0.0 T 22-04-2016 APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 PANTHER PTHR32309 1 123 0.0 T 22-04-2016 APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 447 4.1E-30 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain APECO1_RS11425 b3c1b8803f9bbe3cf3720b8976b601e8 720 Pfam PF02706 Chain length determinant protein 16 252 9.0E-51 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APECO1_RS18560 7e83a2f8447b1a959eb026f7a47d4917 130 SUPERFAMILY SSF54211 5 130 1.59E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS18560 7e83a2f8447b1a959eb026f7a47d4917 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 APECO1_RS18560 7e83a2f8447b1a959eb026f7a47d4917 130 Gene3D G3DSA:3.30.230.10 4 130 3.5E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS18560 7e83a2f8447b1a959eb026f7a47d4917 130 PANTHER PTHR21569 1 130 1.7E-75 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APECO1_RS18560 7e83a2f8447b1a959eb026f7a47d4917 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.138 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid APECO1_RS18560 7e83a2f8447b1a959eb026f7a47d4917 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.8E-48 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 1.5E-100 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 Gene3D G3DSA:3.20.20.70 259 445 3.9E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 SUPERFAMILY SSF51366 257 450 1.54E-56 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 Gene3D G3DSA:3.20.20.70 1 258 2.5E-105 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 SUPERFAMILY SSF51366 1 251 3.41E-86 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 447 8.8E-63 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 PANTHER PTHR22854 1 282 1.3E-146 T 22-04-2016 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 PANTHER PTHR22854:SF2 1 282 1.3E-146 T 22-04-2016 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 452 29.005 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APECO1_RS06985 b78f2ea72053b7dfb8ba6c2f154eda46 452 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 35.769 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APECO1_RS00505 893c12d1c5aaac5930695f74306015f2 276 PANTHER PTHR35851 1 272 2.4E-83 T 22-04-2016 APECO1_RS00505 893c12d1c5aaac5930695f74306015f2 276 Pfam PF08478 POTRA domain, FtsQ-type 56 126 1.6E-19 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type APECO1_RS00505 893c12d1c5aaac5930695f74306015f2 276 PANTHER PTHR35851:SF1 1 272 2.4E-83 T 22-04-2016 APECO1_RS00505 893c12d1c5aaac5930695f74306015f2 276 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 25 255 26.08 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 APECO1_RS00505 893c12d1c5aaac5930695f74306015f2 276 Pfam PF03799 Cell division protein FtsQ 130 247 1.9E-27 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 SUPERFAMILY SSF51905 4 177 1.07E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 SUPERFAMILY SSF51905 268 385 1.07E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 Pfam PF01494 FAD binding domain 4 345 4.1E-29 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 PANTHER PTHR13789:SF5 1 400 1.5E-192 T 22-04-2016 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 PANTHER PTHR13789 1 400 1.5E-192 T 22-04-2016 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 Gene3D G3DSA:3.50.50.60 3 182 9.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 Gene3D G3DSA:3.50.50.60 269 357 9.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 3.0E-135 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 8.6E-20 T 22-04-2016 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 8.6E-20 T 22-04-2016 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.6E-20 T 22-04-2016 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 8.6E-20 T 22-04-2016 APECO1_RS16485 1c948b202199aafd94057617a87fccda 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 APECO1_RS12055 91583ab9f00be84ce8f6b3f8c18c028f 663 SUPERFAMILY SSF56935 29 663 3.4E-129 T 22-04-2016 APECO1_RS12055 91583ab9f00be84ce8f6b3f8c18c028f 663 PANTHER PTHR30069:SF2 31 562 2.2E-119 T 22-04-2016 APECO1_RS12055 91583ab9f00be84ce8f6b3f8c18c028f 663 Pfam PF00593 TonB dependent receptor 395 662 1.4E-39 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS12055 91583ab9f00be84ce8f6b3f8c18c028f 663 PANTHER PTHR30069 31 562 2.2E-119 T 22-04-2016 APECO1_RS12055 91583ab9f00be84ce8f6b3f8c18c028f 663 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 22-04-2016 IPR010916 TonB box, conserved site APECO1_RS12055 91583ab9f00be84ce8f6b3f8c18c028f 663 Gene3D G3DSA:2.170.130.10 41 157 2.3E-45 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS12055 91583ab9f00be84ce8f6b3f8c18c028f 663 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 646 663 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APECO1_RS12055 91583ab9f00be84ce8f6b3f8c18c028f 663 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 152 5.9E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS12055 91583ab9f00be84ce8f6b3f8c18c028f 663 Gene3D G3DSA:2.40.170.20 158 663 5.8E-116 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS22565 8b0aea89cb9da2f45af4434cd9ed0b13 577 SUPERFAMILY SSF53649 235 554 6.54E-32 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS22565 8b0aea89cb9da2f45af4434cd9ed0b13 577 PANTHER PTHR30443:SF2 4 577 0.0 T 22-04-2016 APECO1_RS22565 8b0aea89cb9da2f45af4434cd9ed0b13 577 PANTHER PTHR30443 4 577 0.0 T 22-04-2016 APECO1_RS22565 8b0aea89cb9da2f45af4434cd9ed0b13 577 Gene3D G3DSA:3.40.720.10 240 535 5.7E-14 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS22565 8b0aea89cb9da2f45af4434cd9ed0b13 577 Pfam PF08019 Domain of unknown function (DUF1705) 56 206 5.6E-5 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 APECO1_RS22565 8b0aea89cb9da2f45af4434cd9ed0b13 577 Pfam PF00884 Sulfatase 238 529 1.3E-46 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS12535 1304061c52200ac314a139e6c3983dd8 260 SUPERFAMILY SSF46785 7 79 2.31E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12535 1304061c52200ac314a139e6c3983dd8 260 Gene3D G3DSA:1.10.10.10 5 76 1.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12535 1304061c52200ac314a139e6c3983dd8 260 Pfam PF01614 Bacterial transcriptional regulator 122 247 2.5E-41 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APECO1_RS12535 1304061c52200ac314a139e6c3983dd8 260 SUPERFAMILY SSF55781 72 251 2.55E-48 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS12535 1304061c52200ac314a139e6c3983dd8 260 PANTHER PTHR30136:SF11 1 260 3.2E-162 T 22-04-2016 APECO1_RS12535 1304061c52200ac314a139e6c3983dd8 260 Gene3D G3DSA:3.30.450.40 77 254 1.7E-65 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS12535 1304061c52200ac314a139e6c3983dd8 260 Pfam PF09339 IclR helix-turn-helix domain 9 58 1.7E-8 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS12535 1304061c52200ac314a139e6c3983dd8 260 PANTHER PTHR30136 1 260 3.2E-162 T 22-04-2016 APECO1_RS12535 1304061c52200ac314a139e6c3983dd8 260 SMART SM00346 7 95 2.5E-33 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APECO1_RS08195 ce57e563d2a484e580c09854d14c2e25 45 Pfam PF08136 30S ribosomal protein subunit S22 family 1 44 1.8E-31 T 22-04-2016 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 APECO1_RS08195 ce57e563d2a484e580c09854d14c2e25 45 ProDom PD049510 RIBOSOMAL S22 30S RIBONUCLEOPROTEIN SUBUNIT D RIBOSOME- SEQUENCING DIRECT ASSOCIATED 1 45 2.0E-19 T 22-04-2016 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 APECO1_RS04460 a412ac53bb59a4c44fe7a9ae9193f72c 763 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 133 514 3.8E-147 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 APECO1_RS16185 453121ae4e1098a84bfe62fd567d28b8 176 Gene3D G3DSA:3.90.79.10 3 151 7.1E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS16185 453121ae4e1098a84bfe62fd567d28b8 176 Pfam PF00293 NUDIX domain 7 146 5.1E-27 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS16185 453121ae4e1098a84bfe62fd567d28b8 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS16185 453121ae4e1098a84bfe62fd567d28b8 176 SUPERFAMILY SSF55811 5 159 6.77E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS16185 453121ae4e1098a84bfe62fd567d28b8 176 PANTHER PTHR23114 1 164 1.2E-69 T 22-04-2016 APECO1_RS16185 453121ae4e1098a84bfe62fd567d28b8 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.961 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH APECO1_RS16185 453121ae4e1098a84bfe62fd567d28b8 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS16185 453121ae4e1098a84bfe62fd567d28b8 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 22-04-2016 IPR020476 NUDIX hydrolase APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.7E-41 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 7.4E-141 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 SUPERFAMILY SSF52540 1 342 4.02E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 Gene3D G3DSA:3.40.50.300 230 345 1.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 Gene3D G3DSA:3.40.50.300 1 171 1.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 98.277 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 PANTHER PTHR32182 1 355 3.7E-80 T 22-04-2016 APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 PANTHER PTHR32182:SF0 1 355 3.7E-80 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APECO1_RS21140 173eedbbfd7d0508a102b28323e83932 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APECO1_RS13080 f8c8eb86c7e96dc64ce4fddc56eadf17 483 Pfam PF16928 DNA/protein translocase of phage P22 injectosome 12 225 2.2E-82 T 22-04-2016 IPR031619 DNA transfer protein APECO1_RS25220 0b34e463b7dbd8b3e9005648b6a901d5 404 SUPERFAMILY SSF56349 98 388 2.94E-43 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS25220 0b34e463b7dbd8b3e9005648b6a901d5 404 Pfam PF13356 Domain of unknown function (DUF4102) 20 90 5.5E-13 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 APECO1_RS25220 0b34e463b7dbd8b3e9005648b6a901d5 404 Gene3D G3DSA:1.10.150.130 98 192 2.2E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS25220 0b34e463b7dbd8b3e9005648b6a901d5 404 Pfam PF00589 Phage integrase family 205 378 6.0E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS25220 0b34e463b7dbd8b3e9005648b6a901d5 404 PANTHER PTHR30629:SF4 1 399 1.6E-116 T 22-04-2016 APECO1_RS25220 0b34e463b7dbd8b3e9005648b6a901d5 404 Gene3D G3DSA:1.10.443.10 204 385 1.6E-23 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS25220 0b34e463b7dbd8b3e9005648b6a901d5 404 PANTHER PTHR30629 1 399 1.6E-116 T 22-04-2016 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 Gene3D G3DSA:3.50.50.60 6 183 4.0E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 PANTHER PTHR22912 208 348 1.8E-32 T 22-04-2016 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 PANTHER PTHR22912 7 192 1.8E-32 T 22-04-2016 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 SUPERFAMILY SSF51905 6 345 4.38E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.4E-8 T 22-04-2016 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.4E-8 T 22-04-2016 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.4E-8 T 22-04-2016 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 2.2E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 Gene3D G3DSA:3.50.50.60 184 353 8.4E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.6E-15 T 22-04-2016 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.6E-15 T 22-04-2016 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.6E-15 T 22-04-2016 APECO1_RS05595 a2aeb475fb4217ebed98893c05dbad80 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-15 T 22-04-2016 APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 PIRSF PIRSF002599 1 71 8.7E-25 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 SUPERFAMILY SSF50249 3 69 7.37E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.2E-31 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 PANTHER PTHR11544 1 68 1.3E-43 T 22-04-2016 APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 SMART SM00357 6 70 3.7E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 Gene3D G3DSA:2.40.50.140 5 68 2.9E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 PANTHER PTHR11544:SF65 1 68 1.3E-43 T 22-04-2016 APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 PRINTS PR00050 Cold shock protein signature 43 61 3.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 PRINTS PR00050 Cold shock protein signature 28 37 3.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS25325 525b4fe592c55087cfaa11f241dfa6db 71 PRINTS PR00050 Cold shock protein signature 7 22 3.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS04215 f07736405e77d34a5b38d7f3018c699a 107 Gene3D G3DSA:3.30.110.70 1 104 4.3E-39 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 APECO1_RS04215 f07736405e77d34a5b38d7f3018c699a 107 SUPERFAMILY SSF117782 1 106 9.16E-39 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 APECO1_RS04215 f07736405e77d34a5b38d7f3018c699a 107 Pfam PF01906 Putative heavy-metal-binding 1 104 2.2E-40 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 APECO1_RS04215 f07736405e77d34a5b38d7f3018c699a 107 PANTHER PTHR34068:SF1 1 107 5.1E-46 T 22-04-2016 APECO1_RS04215 f07736405e77d34a5b38d7f3018c699a 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.701 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 APECO1_RS04215 f07736405e77d34a5b38d7f3018c699a 107 PANTHER PTHR34068 1 107 5.1E-46 T 22-04-2016 APECO1_RS02200 24e196a945f1b9f48140393be47cfe49 491 PANTHER PTHR12778 1 404 1.9E-126 T 22-04-2016 APECO1_RS02200 24e196a945f1b9f48140393be47cfe49 491 Pfam PF07690 Major Facilitator Superfamily 17 366 2.0E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS02200 24e196a945f1b9f48140393be47cfe49 491 Gene3D G3DSA:1.20.1250.20 216 405 4.7E-12 T 22-04-2016 APECO1_RS02200 24e196a945f1b9f48140393be47cfe49 491 Gene3D G3DSA:1.20.1250.20 17 199 2.2E-16 T 22-04-2016 APECO1_RS02200 24e196a945f1b9f48140393be47cfe49 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 3.0E-128 T 22-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 APECO1_RS02200 24e196a945f1b9f48140393be47cfe49 491 SUPERFAMILY SSF103473 10 403 4.71E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS07505 2e2069de6c068705de13b29e1b1617c4 140 Gene3D G3DSA:1.10.3600.10 1 121 3.9E-37 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APECO1_RS07505 2e2069de6c068705de13b29e1b1617c4 140 Pfam PF06254 Putative bacterial toxin ydaT 49 111 5.5E-13 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.808773E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.808773E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.808773E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.3E-53 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 SUPERFAMILY SSF50104 2 114 5.52E-48 T 22-04-2016 IPR008991 Translation protein SH3-like domain APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 PIRSF PIRSF002191 1 115 1.1E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.739 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 Pfam PF01245 Ribosomal protein L19 3 113 3.7E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS14760 f5a64710e99eaf586d30566f0129af5e 115 PANTHER PTHR15680 1 114 3.3E-59 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS12220 01c2339d00a1f333a43a8aa4845ab337 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 4.0E-33 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 APECO1_RS12220 01c2339d00a1f333a43a8aa4845ab337 75 SUPERFAMILY SSF158651 1 75 2.22E-32 T 22-04-2016 APECO1_RS12220 01c2339d00a1f333a43a8aa4845ab337 75 PIRSF PIRSF006188 1 72 8.9E-39 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 APECO1_RS12220 01c2339d00a1f333a43a8aa4845ab337 75 Gene3D G3DSA:1.10.3390.10 1 75 4.7E-39 T 22-04-2016 IPR023202 YejL-like domain APECO1_RS12220 01c2339d00a1f333a43a8aa4845ab337 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 24.867 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 APECO1_RS12220 01c2339d00a1f333a43a8aa4845ab337 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 5.8E-25 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PANTHER PTHR34501 2 371 1.0E-170 T 22-04-2016 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 3.1E-62 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 3.1E-62 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.1E-62 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 54 72 3.1E-62 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 232 249 3.1E-62 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 3.1E-62 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 SUPERFAMILY SSF56935 22 371 5.8E-71 T 22-04-2016 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PANTHER PTHR34501:SF6 2 371 1.0E-170 T 22-04-2016 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 226 238 1.2E-10 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 1.2E-10 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 1.2E-10 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 324 341 1.2E-10 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 55 66 1.2E-10 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 Gene3D G3DSA:2.40.160.10 22 371 1.6E-90 T 22-04-2016 IPR023614 Porin domain APECO1_RS10475 6a9acb4b10cfe34bcf2efec017741096 371 Pfam PF00267 Gram-negative porin 27 371 4.0E-119 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APECO1_RS03060 ee87fe2b237539e2d51ffc7a7dce4e35 213 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APECO1_RS03060 ee87fe2b237539e2d51ffc7a7dce4e35 213 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 6.2E-7 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APECO1_RS03060 ee87fe2b237539e2d51ffc7a7dce4e35 213 Gene3D G3DSA:3.90.1550.10 4 202 8.9E-71 T 22-04-2016 APECO1_RS03060 ee87fe2b237539e2d51ffc7a7dce4e35 213 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.651 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APECO1_RS03060 ee87fe2b237539e2d51ffc7a7dce4e35 213 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 204 2.8E-84 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APECO1_RS03060 ee87fe2b237539e2d51ffc7a7dce4e35 213 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 5.0E-24 T 22-04-2016 APECO1_RS03060 ee87fe2b237539e2d51ffc7a7dce4e35 213 SUPERFAMILY SSF55681 4 204 1.41E-68 T 22-04-2016 APECO1_RS03060 ee87fe2b237539e2d51ffc7a7dce4e35 213 PIRSF PIRSF016262 2 210 4.5E-57 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APECO1_RS03060 ee87fe2b237539e2d51ffc7a7dce4e35 213 PANTHER PTHR10993 1 204 1.6E-82 T 22-04-2016 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 PIRSF PIRSF036388 1 427 9.5E-238 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 3.3E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 3.3E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 3.3E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 3.3E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 3.3E-46 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 PANTHER PTHR11963:SF20 43 427 3.6E-270 T 22-04-2016 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 SUPERFAMILY SSF53187 108 426 4.08E-103 T 22-04-2016 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 1.8E-100 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 Gene3D G3DSA:3.40.630.10 98 426 4.3E-117 T 22-04-2016 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 PANTHER PTHR11963 43 427 3.6E-270 T 22-04-2016 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.453 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 APECO1_RS14315 7d17566688bafb158ec1f105aaf34acc 427 Pfam PF12404 Peptidase 5 81 6.5E-34 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 Pfam PF00654 Voltage gated chloride channel 89 437 5.4E-89 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 Gene3D G3DSA:1.10.3080.10 26 452 5.6E-101 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 PRINTS PR00762 Chloride channel signature 102 119 3.1E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 PRINTS PR00762 Chloride channel signature 405 424 3.1E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 PRINTS PR00762 Chloride channel signature 387 403 3.1E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 PRINTS PR00762 Chloride channel signature 352 372 3.1E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 PRINTS PR00762 Chloride channel signature 183 202 3.1E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 PANTHER PTHR11689 8 451 5.1E-213 T 22-04-2016 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 SUPERFAMILY SSF81340 15 453 1.96E-111 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 47.995 T 22-04-2016 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 APECO1_RS00835 0be898a7962f569dd345b59a54efe502 473 PANTHER PTHR11689:SF96 8 451 5.1E-213 T 22-04-2016 APECO1_RS12650 75f89e6c6a4378fed740981942f9c248 323 Pfam PF04389 Peptidase family M28 95 316 5.7E-24 T 22-04-2016 IPR007484 Peptidase M28 APECO1_RS12650 75f89e6c6a4378fed740981942f9c248 323 SUPERFAMILY SSF53187 247 320 9.95E-45 T 22-04-2016 APECO1_RS12650 75f89e6c6a4378fed740981942f9c248 323 SUPERFAMILY SSF53187 38 217 9.95E-45 T 22-04-2016 APECO1_RS12650 75f89e6c6a4378fed740981942f9c248 323 PANTHER PTHR12147 6 238 3.4E-46 T 22-04-2016 APECO1_RS12650 75f89e6c6a4378fed740981942f9c248 323 PANTHER PTHR12147 265 320 3.4E-46 T 22-04-2016 APECO1_RS12650 75f89e6c6a4378fed740981942f9c248 323 Gene3D G3DSA:3.40.630.10 35 321 3.7E-46 T 22-04-2016 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 SUPERFAMILY SSF47323 316 460 3.79E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 2.4E-201 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.849 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 Gene3D G3DSA:3.40.50.620 20 305 7.5E-114 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 Gene3D G3DSA:1.20.120.640 306 392 7.7E-30 T 22-04-2016 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.2E-146 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 Pfam PF09190 DALR domain 341 402 6.7E-26 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 PANTHER PTHR10890 1 460 3.0E-270 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 SMART SM00840 341 402 3.1E-29 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APECO1_RS02675 5a58d31c0d86a92dbede48e543564727 461 SUPERFAMILY SSF52374 1 313 1.38E-103 T 22-04-2016 APECO1_RS05155 6c379e7685534138daeae9015a717895 423 SUPERFAMILY SSF54909 54 416 4.47E-97 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS05155 6c379e7685534138daeae9015a717895 423 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 6 422 5.6E-185 T 22-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- APECO1_RS05155 6c379e7685534138daeae9015a717895 423 PANTHER PTHR30521 44 423 6.6E-196 T 22-04-2016 APECO1_RS05155 6c379e7685534138daeae9015a717895 423 Pfam PF04261 Dyp-type peroxidase family 61 410 5.4E-121 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APECO1_RS05155 6c379e7685534138daeae9015a717895 423 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 61 410 9.5E-108 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APECO1_RS05155 6c379e7685534138daeae9015a717895 423 PANTHER PTHR30521:SF4 44 423 6.6E-196 T 22-04-2016 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 SUPERFAMILY SSF103025 3 277 1.04E-89 T 22-04-2016 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 Gene3D G3DSA:3.30.70.1400 54 137 8.3E-32 T 22-04-2016 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 9.2E-170 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 PANTHER PTHR13847:SF5 5 357 2.8E-60 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 PIRSF PIRSF006487 1 363 4.4E-79 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 4.0E-82 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.666 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 Gene3D G3DSA:2.40.30.110 278 361 4.5E-30 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 1.1E-18 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 Gene3D G3DSA:3.30.1360.120 3 53 2.6E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 Gene3D G3DSA:3.30.1360.120 144 231 2.6E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 PANTHER PTHR13847 5 357 2.8E-60 T 22-04-2016 APECO1_RS16480 f77238b6e588e105602f698c7189ce8b 364 SUPERFAMILY SSF101790 271 361 3.11E-26 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain APECO1_RS14465 df563e71ff8b506a8da342bce73bb5b5 167 Gene3D G3DSA:3.40.140.10 7 151 6.4E-61 T 22-04-2016 APECO1_RS14465 df563e71ff8b506a8da342bce73bb5b5 167 SUPERFAMILY SSF53927 7 157 3.18E-59 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APECO1_RS14465 df563e71ff8b506a8da342bce73bb5b5 167 PANTHER PTHR11079 8 155 1.9E-52 T 22-04-2016 APECO1_RS14465 df563e71ff8b506a8da342bce73bb5b5 167 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APECO1_RS14465 df563e71ff8b506a8da342bce73bb5b5 167 Pfam PF14437 MafB19-like deaminase 7 153 9.2E-34 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APECO1_RS14465 df563e71ff8b506a8da342bce73bb5b5 167 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 153 49.583 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APECO1_RS26785 6d87900b402cbad10ea92c1255abef0d 184 PANTHER PTHR11946:SF11 1 174 1.4E-75 T 22-04-2016 APECO1_RS26785 6d87900b402cbad10ea92c1255abef0d 184 Gene3D G3DSA:1.10.730.10 23 168 4.3E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS26785 6d87900b402cbad10ea92c1255abef0d 184 SUPERFAMILY SSF47323 33 174 1.35E-52 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS26785 6d87900b402cbad10ea92c1255abef0d 184 Pfam PF08264 Anticodon-binding domain of tRNA 66 173 1.7E-24 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APECO1_RS26785 6d87900b402cbad10ea92c1255abef0d 184 PANTHER PTHR11946 1 174 1.4E-75 T 22-04-2016 APECO1_RS10695 a2f1cd58b199ee4d22e62c33d756636c 121 Pfam PF05866 Endodeoxyribonuclease RusA 10 101 1.6E-16 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS10695 a2f1cd58b199ee4d22e62c33d756636c 121 SUPERFAMILY SSF103084 4 118 1.12E-33 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS10695 a2f1cd58b199ee4d22e62c33d756636c 121 PIRSF PIRSF001007 2 121 7.5E-51 T 22-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 APECO1_RS10695 a2f1cd58b199ee4d22e62c33d756636c 121 Gene3D G3DSA:3.30.1330.70 4 119 6.0E-40 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS07860 7a18902662580e81207c77787e3091d9 585 Pfam PF12146 Serine aminopeptidase, S33 32 266 6.9E-63 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 APECO1_RS07860 7a18902662580e81207c77787e3091d9 585 PANTHER PTHR11614:SF106 1 304 1.1E-210 T 22-04-2016 APECO1_RS07860 7a18902662580e81207c77787e3091d9 585 Gene3D G3DSA:3.40.50.1820 16 282 5.3E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07860 7a18902662580e81207c77787e3091d9 585 Gene3D G3DSA:3.40.50.150 401 565 2.4E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS07860 7a18902662580e81207c77787e3091d9 585 SUPERFAMILY SSF53335 384 576 1.2E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS07860 7a18902662580e81207c77787e3091d9 585 SUPERFAMILY SSF53474 7 143 1.87E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07860 7a18902662580e81207c77787e3091d9 585 SUPERFAMILY SSF53474 210 281 1.87E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07860 7a18902662580e81207c77787e3091d9 585 PANTHER PTHR11614 1 304 1.1E-210 T 22-04-2016 APECO1_RS07860 7a18902662580e81207c77787e3091d9 585 Pfam PF12147 Putative methyltransferase 275 582 3.3E-148 T 22-04-2016 IPR022744 Methyltransferase domain, putative APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 4.7E-148 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PANTHER PTHR32195:SF17 1 399 2.0E-222 T 22-04-2016 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 2.2E-92 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 2.2E-92 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 2.2E-92 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 2.2E-92 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 2.2E-92 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 2.2E-92 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 2.2E-92 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 2.2E-92 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 2.2E-92 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 1.7E-143 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APECO1_RS10185 f70aac4527569687127d7913888eeae9 403 PANTHER PTHR32195 1 399 2.0E-222 T 22-04-2016 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 SMART SM00382 53 242 9.1E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 PANTHER PTHR24220:SF374 6 16 3.9E-170 T 22-04-2016 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 PANTHER PTHR24220:SF374 41 292 3.9E-170 T 22-04-2016 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 SUPERFAMILY SSF52540 43 270 3.39E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 Gene3D G3DSA:3.40.50.300 41 264 1.6E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 SUPERFAMILY SSF54631 276 394 9.51E-12 T 22-04-2016 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 Pfam PF00005 ABC transporter 45 192 2.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 Gene3D G3DSA:3.10.580.10 272 395 8.2E-22 T 22-04-2016 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 PANTHER PTHR24220 6 16 3.9E-170 T 22-04-2016 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 PANTHER PTHR24220 41 292 3.9E-170 T 22-04-2016 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 1.5E-192 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 APECO1_RS15245 4550189a9223f2c0024f6179a19054cc 400 Pfam PF00571 CBS domain 347 393 1.3E-5 T 22-04-2016 IPR000644 CBS domain APECO1_RS16550 9b2d27c2ee1da8eeb34f38db22efe571 196 TIGRFAM TIGR00948 2a75: L-lysine exporter 1 176 7.8E-71 T 22-04-2016 IPR004777 L-lysine exporter/arginine exporter GO:0016021 APECO1_RS16550 9b2d27c2ee1da8eeb34f38db22efe571 196 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 190 35.0 T 22-04-2016 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 APECO1_RS16550 9b2d27c2ee1da8eeb34f38db22efe571 196 PANTHER PTHR30086:SF0 1 192 8.4E-96 T 22-04-2016 APECO1_RS16550 9b2d27c2ee1da8eeb34f38db22efe571 196 PANTHER PTHR30086 1 192 8.4E-96 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS16550 9b2d27c2ee1da8eeb34f38db22efe571 196 Pfam PF01810 LysE type translocator 1 186 7.6E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 PANTHER PTHR30419 1 294 1.2E-130 T 22-04-2016 APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 PANTHER PTHR30419:SF8 1 294 1.2E-130 T 22-04-2016 APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 Gene3D G3DSA:1.10.10.10 1 87 3.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 SUPERFAMILY SSF53850 90 289 2.81E-39 T 22-04-2016 APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 Pfam PF03466 LysR substrate binding domain 88 286 1.4E-41 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 SUPERFAMILY SSF46785 1 86 1.72E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 Gene3D G3DSA:3.40.190.10 90 174 1.3E-10 T 22-04-2016 APECO1_RS23260 d03dd8e799e152cb0ea1a009bd190c92 294 Gene3D G3DSA:3.40.190.10 175 259 2.0E-22 T 22-04-2016 APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 SUPERFAMILY SSF53633 6 291 3.07E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 2.2E-197 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 PANTHER PTHR30602:SF3 1 442 0.0 T 22-04-2016 APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 PIRSF PIRSF000423 1 442 6.1E-210 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 PANTHER PTHR30602 1 442 0.0 T 22-04-2016 APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 234.82 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 Gene3D G3DSA:3.40.630.30 294 440 2.5E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 SUPERFAMILY SSF55729 256 418 2.27E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 Gene3D G3DSA:3.40.1160.10 24 291 6.1E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 Pfam PF00583 Acetyltransferase (GNAT) family 342 414 2.4E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS16125 10265a8932b7f94d9d3cdd29229df1d6 443 Pfam PF00696 Amino acid kinase family 26 268 3.3E-33 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS20920 02182f2bfab31bf32aeff479ce5c3252 460 PANTHER PTHR11328:SF24 1 457 2.5E-182 T 22-04-2016 APECO1_RS20920 02182f2bfab31bf32aeff479ce5c3252 460 Gene3D G3DSA:1.20.1250.20 23 208 2.9E-10 T 22-04-2016 APECO1_RS20920 02182f2bfab31bf32aeff479ce5c3252 460 Gene3D G3DSA:1.20.1250.20 231 422 1.2E-4 T 22-04-2016 APECO1_RS20920 02182f2bfab31bf32aeff479ce5c3252 460 PANTHER PTHR11328 1 457 2.5E-182 T 22-04-2016 APECO1_RS20920 02182f2bfab31bf32aeff479ce5c3252 460 SUPERFAMILY SSF103473 13 426 7.19E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS20920 02182f2bfab31bf32aeff479ce5c3252 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 2.0E-155 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APECO1_RS20920 02182f2bfab31bf32aeff479ce5c3252 460 Pfam PF13347 MFS/sugar transport protein 13 431 4.3E-101 T 22-04-2016 APECO1_RS08910 5d910cc092339510027ffbbca7df046b 403 PANTHER PTHR23502 7 401 2.1E-219 T 22-04-2016 APECO1_RS08910 5d910cc092339510027ffbbca7df046b 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 382 3.7E-147 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APECO1_RS08910 5d910cc092339510027ffbbca7df046b 403 Gene3D G3DSA:1.20.1250.20 7 189 1.3E-29 T 22-04-2016 APECO1_RS08910 5d910cc092339510027ffbbca7df046b 403 Gene3D G3DSA:1.20.1250.20 200 377 1.1E-13 T 22-04-2016 APECO1_RS08910 5d910cc092339510027ffbbca7df046b 403 Pfam PF07690 Major Facilitator Superfamily 14 341 2.8E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS08910 5d910cc092339510027ffbbca7df046b 403 SUPERFAMILY SSF103473 5 379 2.35E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS08910 5d910cc092339510027ffbbca7df046b 403 PANTHER PTHR23502:SF28 7 401 2.1E-219 T 22-04-2016 APECO1_RS03255 65dd058fbd4635e4211ba8b84b54e0cd 426 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 416 4.3E-12 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS03255 65dd058fbd4635e4211ba8b84b54e0cd 426 PANTHER PTHR10283:SF12 4 411 6.0E-17 T 22-04-2016 APECO1_RS03255 65dd058fbd4635e4211ba8b84b54e0cd 426 PANTHER PTHR10283 4 411 6.0E-17 T 22-04-2016 APECO1_RS00620 c648cfd0743c09adef8048ef3378efea 96 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 11 93 5.0E-33 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 APECO1_RS00620 c648cfd0743c09adef8048ef3378efea 96 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 5 93 3.3E-27 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 APECO1_RS00620 c648cfd0743c09adef8048ef3378efea 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 72 93 4.5E-9 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 APECO1_RS00620 c648cfd0743c09adef8048ef3378efea 96 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 5 23 4.5E-9 T 22-04-2016 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 APECO1_RS00620 c648cfd0743c09adef8048ef3378efea 96 SUPERFAMILY SSF47345 3 94 2.22E-32 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 APECO1_RS00620 c648cfd0743c09adef8048ef3378efea 96 Gene3D G3DSA:1.10.1200.20 3 94 1.5E-33 T 22-04-2016 IPR023802 Colicin/pyocin immunity protein domain GO:0015643 APECO1_RS02925 60d38d8dca99e91b97fed754ca728376 386 Pfam PF00155 Aminotransferase class I and II 32 383 2.9E-57 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS02925 60d38d8dca99e91b97fed754ca728376 386 Gene3D G3DSA:3.40.640.10 45 272 1.3E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS02925 60d38d8dca99e91b97fed754ca728376 386 Gene3D G3DSA:3.90.1150.10 273 385 2.6E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS02925 60d38d8dca99e91b97fed754ca728376 386 PANTHER PTHR11751 11 386 4.0E-160 T 22-04-2016 APECO1_RS02925 60d38d8dca99e91b97fed754ca728376 386 SUPERFAMILY SSF53383 10 386 1.25E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS02925 60d38d8dca99e91b97fed754ca728376 386 PANTHER PTHR11751:SF301 11 386 4.0E-160 T 22-04-2016 APECO1_RS24125 315a0a069377fb81ca54d8d535d1b4d2 342 Gene3D G3DSA:3.20.20.70 104 315 3.3E-18 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS24125 315a0a069377fb81ca54d8d535d1b4d2 342 PANTHER PTHR30538 8 339 2.2E-148 T 22-04-2016 APECO1_RS24125 315a0a069377fb81ca54d8d535d1b4d2 342 Pfam PF13353 4Fe-4S single cluster domain 112 176 1.7E-5 T 22-04-2016 APECO1_RS24125 315a0a069377fb81ca54d8d535d1b4d2 342 SUPERFAMILY SSF102114 102 324 1.96E-26 T 22-04-2016 APECO1_RS24125 315a0a069377fb81ca54d8d535d1b4d2 342 Pfam PF04055 Radical SAM superfamily 118 265 7.5E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS24125 315a0a069377fb81ca54d8d535d1b4d2 342 PIRSF PIRSF004911 1 342 3.8E-125 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APECO1_RS24125 315a0a069377fb81ca54d8d535d1b4d2 342 PANTHER PTHR30538:SF1 8 339 2.2E-148 T 22-04-2016 APECO1_RS24125 315a0a069377fb81ca54d8d535d1b4d2 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 1.0E-156 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APECO1_RS24125 315a0a069377fb81ca54d8d535d1b4d2 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 4.1E-161 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 Gene3D G3DSA:3.90.400.10 107 175 1.4E-31 T 22-04-2016 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 Gene3D G3DSA:2.60.40.1180 476 550 8.9E-21 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 SUPERFAMILY SSF51011 475 549 4.48E-18 T 22-04-2016 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 Gene3D G3DSA:3.20.20.80 176 473 6.9E-125 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 Gene3D G3DSA:3.20.20.80 5 106 6.9E-125 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 548 1.7E-265 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 PANTHER PTHR10357:SF142 451 530 6.0E-250 T 22-04-2016 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 PANTHER PTHR10357:SF142 5 386 6.0E-250 T 22-04-2016 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 PANTHER PTHR10357:SF142 407 419 6.0E-250 T 22-04-2016 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 Pfam PF11941 Domain of unknown function (DUF3459) 459 548 2.1E-8 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 PANTHER PTHR10357 451 530 6.0E-250 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 PANTHER PTHR10357 5 386 6.0E-250 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 PANTHER PTHR10357 407 419 6.0E-250 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 Pfam PF00128 Alpha amylase, catalytic domain 30 372 2.3E-127 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 SUPERFAMILY SSF51445 5 472 2.18E-154 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS24625 eeb1ddc04fd345d7a49ba526a8772142 551 SMART SM00642 15 414 1.8E-157 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS11635 3fa695245c51a9dbffc5632824a6ef3b 344 PIRSF PIRSF018494 1 344 6.3E-155 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria APECO1_RS11635 3fa695245c51a9dbffc5632824a6ef3b 344 Pfam PF04860 Phage portal protein 89 322 4.0E-12 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein APECO1_RS11635 3fa695245c51a9dbffc5632824a6ef3b 344 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 52 332 4.5E-75 T 22-04-2016 IPR006430 Phage portal protein PBSX family APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 PANTHER PTHR21109 1 71 2.6E-27 T 22-04-2016 APECO1_RS17835 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APECO1_RS03080 f178f791322fdabd64bd78ba631d77bf 370 PANTHER PTHR30474 1 370 2.3E-183 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APECO1_RS03080 f178f791322fdabd64bd78ba631d77bf 370 Pfam PF01098 Cell cycle protein 20 364 6.5E-126 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APECO1_RS03080 f178f791322fdabd64bd78ba631d77bf 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.1E-137 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APECO1_RS03080 f178f791322fdabd64bd78ba631d77bf 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 APECO1_RS03080 f178f791322fdabd64bd78ba631d77bf 370 PANTHER PTHR30474:SF1 1 370 2.3E-183 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APECO1_RS01145 8045ecb73d79c1c6a3e96b2a54b8192a 159 Pfam PF05638 Type VI secretion system effector, Hcp 7 143 3.9E-22 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS01145 8045ecb73d79c1c6a3e96b2a54b8192a 159 PANTHER PTHR34319 1 159 7.4E-55 T 22-04-2016 APECO1_RS01145 8045ecb73d79c1c6a3e96b2a54b8192a 159 SUPERFAMILY SSF141452 2 157 1.57E-34 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS01145 8045ecb73d79c1c6a3e96b2a54b8192a 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 4.8E-60 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS01145 8045ecb73d79c1c6a3e96b2a54b8192a 159 Gene3D G3DSA:2.30.110.20 1 150 3.5E-21 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS03805 da9651dc099599f97114d25fc0619de8 150 SUPERFAMILY SSF54690 6 150 1.03E-54 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS03805 da9651dc099599f97114d25fc0619de8 150 PANTHER PTHR23404 1 150 1.1E-45 T 22-04-2016 APECO1_RS03805 da9651dc099599f97114d25fc0619de8 150 Gene3D G3DSA:3.90.1170.40 4 150 1.3E-57 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS03805 da9651dc099599f97114d25fc0619de8 150 PANTHER PTHR23404:SF2 1 150 1.1E-45 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS03805 da9651dc099599f97114d25fc0619de8 150 Pfam PF02391 MoaE protein 11 121 5.9E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APECO1_RS21235 666b85f056e08dd2b159b9990ab591c5 389 Gene3D G3DSA:3.40.50.1820 130 389 1.4E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS21235 666b85f056e08dd2b159b9990ab591c5 389 Gene3D G3DSA:2.60.40.10 43 102 1.1E-9 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS21235 666b85f056e08dd2b159b9990ab591c5 389 SUPERFAMILY SSF53474 136 389 1.28E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS21235 666b85f056e08dd2b159b9990ab591c5 389 PANTHER PTHR10907 53 304 1.5E-87 T 22-04-2016 APECO1_RS21235 666b85f056e08dd2b159b9990ab591c5 389 Pfam PF00756 Putative esterase 150 309 4.0E-18 T 22-04-2016 IPR000801 Putative esterase APECO1_RS21235 666b85f056e08dd2b159b9990ab591c5 389 SUPERFAMILY SSF81296 45 109 5.07E-10 T 22-04-2016 IPR014756 Immunoglobulin E-set APECO1_RS21235 666b85f056e08dd2b159b9990ab591c5 389 PANTHER PTHR10907:SF33 53 304 1.5E-87 T 22-04-2016 APECO1_RS21235 666b85f056e08dd2b159b9990ab591c5 389 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 43 103 3.7E-8 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APECO1_RS25755 06de134441d7b5fa88be33cac6c844fc 187 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 152 1.9E-40 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS25755 06de134441d7b5fa88be33cac6c844fc 187 PANTHER PTHR10192 4 187 3.4E-88 T 22-04-2016 APECO1_RS25755 06de134441d7b5fa88be33cac6c844fc 187 Pfam PF00994 Probable molybdopterin binding domain 14 153 6.1E-28 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS25755 06de134441d7b5fa88be33cac6c844fc 187 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APECO1_RS25755 06de134441d7b5fa88be33cac6c844fc 187 SUPERFAMILY SSF53218 9 186 1.22E-47 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS25755 06de134441d7b5fa88be33cac6c844fc 187 SMART SM00852 13 159 1.0E-22 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS25755 06de134441d7b5fa88be33cac6c844fc 187 Gene3D G3DSA:3.40.980.10 8 185 5.5E-53 T 22-04-2016 IPR001453 MoaB/Mog domain APECO1_RS08590 ba3dc74f48fa2edfcfa472ce207310d8 109 PANTHER PTHR30561:SF6 5 109 9.0E-69 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 APECO1_RS08590 ba3dc74f48fa2edfcfa472ce207310d8 109 PANTHER PTHR30561 5 109 9.0E-69 T 22-04-2016 APECO1_RS08590 ba3dc74f48fa2edfcfa472ce207310d8 109 Pfam PF00893 Small Multidrug Resistance protein 6 99 4.0E-29 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APECO1_RS08590 ba3dc74f48fa2edfcfa472ce207310d8 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 34.9 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 APECO1_RS08590 ba3dc74f48fa2edfcfa472ce207310d8 109 SUPERFAMILY SSF103481 12 108 2.09E-17 T 22-04-2016 APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 Gene3D G3DSA:3.40.190.10 201 252 2.1E-8 T 22-04-2016 APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 Pfam PF03466 LysR substrate binding domain 89 293 9.5E-37 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.2E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 SUPERFAMILY SSF53850 89 294 3.14E-31 T 22-04-2016 APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 PANTHER PTHR30126:SF14 1 296 7.9E-200 T 22-04-2016 APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 SUPERFAMILY SSF46785 1 111 6.52E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 PANTHER PTHR30126 1 296 7.9E-200 T 22-04-2016 APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 Gene3D G3DSA:1.10.10.10 2 85 4.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS21495 9e94adf1c1934f6bfc44a6e3cfa33560 296 Gene3D G3DSA:3.40.190.10 89 200 4.5E-24 T 22-04-2016 APECO1_RS17700 657092d34658849cbe1d568f861f5331 262 SUPERFAMILY SSF53213 5 262 2.88E-91 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APECO1_RS17700 657092d34658849cbe1d568f861f5331 262 PIRSF PIRSF006157 1 262 2.3E-94 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 APECO1_RS17700 657092d34658849cbe1d568f861f5331 262 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 257 1.1E-24 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APECO1_RS17700 657092d34658849cbe1d568f861f5331 262 PANTHER PTHR30096 1 262 1.9E-103 T 22-04-2016 APECO1_RS17700 657092d34658849cbe1d568f861f5331 262 PANTHER PTHR30096:SF0 1 262 1.9E-103 T 22-04-2016 APECO1_RS17700 657092d34658849cbe1d568f861f5331 262 Gene3D G3DSA:3.40.830.10 2 262 6.4E-100 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 PANTHER PTHR11938:SF82 110 206 2.3E-33 T 22-04-2016 APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 PANTHER PTHR11938:SF82 67 93 2.3E-33 T 22-04-2016 APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 Gene3D G3DSA:3.30.70.20 62 127 1.5E-10 T 22-04-2016 APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 PANTHER PTHR11938 110 206 2.3E-33 T 22-04-2016 APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 PANTHER PTHR11938 67 93 2.3E-33 T 22-04-2016 APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 Gene3D G3DSA:3.30.70.20 159 202 3.7E-13 T 22-04-2016 APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 Pfam PF12800 4Fe-4S binding domain 67 78 0.099 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 SUPERFAMILY SSF54862 62 205 1.53E-37 T 22-04-2016 APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 Gene3D G3DSA:3.30.70.20 128 158 6.1E-11 T 22-04-2016 APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 183 194 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 156 167 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS08990 962052da4751e1f30f549ac708e0b923 208 Pfam PF13247 4Fe-4S dicluster domain 116 195 2.2E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS09555 89bd94dcae3f90533b21b0b27c5e724c 427 PANTHER PTHR30510 1 427 2.5E-200 T 22-04-2016 APECO1_RS09555 89bd94dcae3f90533b21b0b27c5e724c 427 Pfam PF04285 Protein of unknown function (DUF444) 4 421 1.0E-186 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 APECO1_RS09555 89bd94dcae3f90533b21b0b27c5e724c 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 42.705 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 APECO1_RS15645 2436482ed710879a6b519783a7d9901f 201 Pfam PF01583 Adenylylsulphate kinase 27 179 9.8E-73 T 22-04-2016 APECO1_RS15645 2436482ed710879a6b519783a7d9901f 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 2.0E-89 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 APECO1_RS15645 2436482ed710879a6b519783a7d9901f 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 38.735 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 APECO1_RS15645 2436482ed710879a6b519783a7d9901f 201 Gene3D G3DSA:3.40.50.300 6 200 1.9E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15645 2436482ed710879a6b519783a7d9901f 201 PANTHER PTHR11055 5 199 9.7E-133 T 22-04-2016 APECO1_RS15645 2436482ed710879a6b519783a7d9901f 201 SUPERFAMILY SSF52540 18 194 8.26E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22240 c99729294c53f70764f4363b288c6736 277 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 277 1.8E-102 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 APECO1_RS22240 c99729294c53f70764f4363b288c6736 277 PANTHER PTHR30592 5 275 3.2E-134 T 22-04-2016 APECO1_RS22240 c99729294c53f70764f4363b288c6736 277 Gene3D G3DSA:3.10.20.10 40 125 5.0E-32 T 22-04-2016 APECO1_RS22240 c99729294c53f70764f4363b288c6736 277 PIRSF PIRSF015626 4 277 1.3E-82 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 APECO1_RS22240 c99729294c53f70764f4363b288c6736 277 PANTHER PTHR30592:SF1 5 275 3.2E-134 T 22-04-2016 APECO1_RS22240 c99729294c53f70764f4363b288c6736 277 Gene3D G3DSA:3.40.140.10 139 275 7.5E-50 T 22-04-2016 APECO1_RS22240 c99729294c53f70764f4363b288c6736 277 SUPERFAMILY SSF53927 22 275 9.63E-82 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APECO1_RS22240 c99729294c53f70764f4363b288c6736 277 Hamap MF_00187 Protein FdhD [fdhD]. 7 276 37.774 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 APECO1_RS22240 c99729294c53f70764f4363b288c6736 277 Pfam PF02634 FdhD/NarQ family 38 275 3.5E-72 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 SUPERFAMILY SSF50621 228 358 4.19E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 2.6E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PANTHER PTHR30511 1 359 1.1E-250 T 22-04-2016 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 Gene3D G3DSA:2.40.37.10 213 359 6.6E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PANTHER PTHR30511:SF4 1 359 1.1E-250 T 22-04-2016 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 2.5E-151 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.2E-70 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 288 305 7.8E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 60 78 7.8E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 192 219 7.8E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 155 166 7.8E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 26 42 7.8E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 120 132 7.8E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 340 353 7.8E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 250 265 7.8E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 PRINTS PR00992 Alanine racemase signature 267 282 7.8E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 SUPERFAMILY SSF51419 8 235 8.87E-69 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 SMART SM01005 234 358 1.2E-62 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 Gene3D G3DSA:3.20.20.10 11 212 1.5E-75 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS23140 4acb9d16a7550979aa171f964e4ba7ed 359 Hamap MF_01201 Alanine racemase. 1 358 34.764 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS25120 0c14a2385fa09a0770ee8315e2d19389 301 SUPERFAMILY SSF48008 157 294 2.2E-13 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS25120 0c14a2385fa09a0770ee8315e2d19389 301 SUPERFAMILY SSF46785 3 70 8.14E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25120 0c14a2385fa09a0770ee8315e2d19389 301 Pfam PF07729 FCD domain 159 286 2.6E-9 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS25120 0c14a2385fa09a0770ee8315e2d19389 301 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 2.1E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS25120 0c14a2385fa09a0770ee8315e2d19389 301 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 2.1E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS25120 0c14a2385fa09a0770ee8315e2d19389 301 SMART SM00895 159 287 7.6E-11 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS25120 0c14a2385fa09a0770ee8315e2d19389 301 Gene3D G3DSA:1.10.10.10 3 72 1.0E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25120 0c14a2385fa09a0770ee8315e2d19389 301 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 61 6.1E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS25120 0c14a2385fa09a0770ee8315e2d19389 301 Gene3D G3DSA:1.20.120.530 154 299 1.7E-14 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS02970 d55a3468420609a6b912793bdcd7f945 268 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 148 159 - T 22-04-2016 IPR033130 Ribonuclease T2, His active site 2 APECO1_RS02970 d55a3468420609a6b912793bdcd7f945 268 Gene3D G3DSA:3.90.730.10 33 263 4.6E-33 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APECO1_RS02970 d55a3468420609a6b912793bdcd7f945 268 SUPERFAMILY SSF55895 33 262 7.72E-29 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APECO1_RS02970 d55a3468420609a6b912793bdcd7f945 268 Pfam PF00445 Ribonuclease T2 family 38 237 1.6E-12 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APECO1_RS02970 d55a3468420609a6b912793bdcd7f945 268 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 75 82 - T 22-04-2016 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 APECO1_RS03470 737e8a0a90e3c46a182fef105e753190 134 Gene3D G3DSA:1.20.1300.10 8 134 5.2E-43 T 22-04-2016 APECO1_RS03470 737e8a0a90e3c46a182fef105e753190 134 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 128 7.6E-31 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 APECO1_RS03470 737e8a0a90e3c46a182fef105e753190 134 PIRSF PIRSF000178 1 134 8.2E-33 T 22-04-2016 APECO1_RS03470 737e8a0a90e3c46a182fef105e753190 134 SUPERFAMILY SSF81343 7 134 1.33E-36 T 22-04-2016 APECO1_RS03470 737e8a0a90e3c46a182fef105e753190 134 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 12 131 7.7E-40 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 APECO1_RS03470 737e8a0a90e3c46a182fef105e753190 134 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 14 38 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 APECO1_RS03470 737e8a0a90e3c46a182fef105e753190 134 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 89 102 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 APECO1_RS03470 737e8a0a90e3c46a182fef105e753190 134 PANTHER PTHR10978:SF4 8 134 7.8E-81 T 22-04-2016 APECO1_RS03470 737e8a0a90e3c46a182fef105e753190 134 PANTHER PTHR10978 8 134 7.8E-81 T 22-04-2016 APECO1_RS06595 77e481accb432ee9ea8c059406c01043 337 PANTHER PTHR24220 21 330 3.4E-163 T 22-04-2016 APECO1_RS06595 77e481accb432ee9ea8c059406c01043 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 2.1E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS06595 77e481accb432ee9ea8c059406c01043 337 SMART SM00382 48 254 2.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS06595 77e481accb432ee9ea8c059406c01043 337 Gene3D G3DSA:3.40.50.300 13 276 8.2E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06595 77e481accb432ee9ea8c059406c01043 337 Pfam PF00005 ABC transporter 40 196 5.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS06595 77e481accb432ee9ea8c059406c01043 337 SUPERFAMILY SSF52540 49 316 1.78E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06595 77e481accb432ee9ea8c059406c01043 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 6.0E-25 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APECO1_RS06595 77e481accb432ee9ea8c059406c01043 337 PANTHER PTHR24220:SF535 21 330 3.4E-163 T 22-04-2016 APECO1_RS06595 77e481accb432ee9ea8c059406c01043 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS25140 3a20811860fd83fc5985fe52fc54224b 245 SUPERFAMILY SSF52540 64 226 7.04E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25140 3a20811860fd83fc5985fe52fc54224b 245 SMART SM00382 98 227 2.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS25140 3a20811860fd83fc5985fe52fc54224b 245 PANTHER PTHR30050:SF9 1 240 3.0E-203 T 22-04-2016 APECO1_RS25140 3a20811860fd83fc5985fe52fc54224b 245 Pfam PF01695 IstB-like ATP binding protein 93 218 1.6E-17 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APECO1_RS25140 3a20811860fd83fc5985fe52fc54224b 245 PANTHER PTHR30050 1 240 3.0E-203 T 22-04-2016 APECO1_RS25140 3a20811860fd83fc5985fe52fc54224b 245 Gene3D G3DSA:3.40.50.300 51 222 4.5E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS25140 3a20811860fd83fc5985fe52fc54224b 245 PIRSF PIRSF003073 1 245 1.0E-35 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APECO1_RS06445 0c820928716ca3709c71037750c21db1 366 PANTHER PTHR37958 5 366 3.4E-131 T 22-04-2016 APECO1_RS06445 0c820928716ca3709c71037750c21db1 366 Pfam PF01699 Sodium/calcium exchanger protein 223 364 6.5E-9 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APECO1_RS06445 0c820928716ca3709c71037750c21db1 366 Pfam PF01699 Sodium/calcium exchanger protein 40 190 3.0E-14 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APECO1_RS06445 0c820928716ca3709c71037750c21db1 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 1 365 1.7E-127 T 22-04-2016 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 APECO1_RS06445 0c820928716ca3709c71037750c21db1 366 PANTHER PTHR37958:SF1 5 366 3.4E-131 T 22-04-2016 APECO1_RS10460 2446204058fd31c74c2f308e18e897fd 231 Gene3D G3DSA:1.10.3210.10 184 214 1.7E-45 T 22-04-2016 IPR006674 HD domain APECO1_RS10460 2446204058fd31c74c2f308e18e897fd 231 Gene3D G3DSA:1.10.3210.10 2 145 1.7E-45 T 22-04-2016 IPR006674 HD domain APECO1_RS10460 2446204058fd31c74c2f308e18e897fd 231 Pfam PF01966 HD domain 29 131 5.1E-14 T 22-04-2016 IPR006674 HD domain APECO1_RS10460 2446204058fd31c74c2f308e18e897fd 231 SMART SM00471 22 141 5.5E-9 T 22-04-2016 IPR003607 HD/PDEase domain APECO1_RS10460 2446204058fd31c74c2f308e18e897fd 231 SUPERFAMILY SSF109604 1 214 1.07E-62 T 22-04-2016 APECO1_RS10460 2446204058fd31c74c2f308e18e897fd 231 PANTHER PTHR33594 8 225 1.5E-70 T 22-04-2016 APECO1_RS10460 2446204058fd31c74c2f308e18e897fd 231 PANTHER PTHR33594:SF1 8 225 1.5E-70 T 22-04-2016 APECO1_RS12350 81fce031a78668643fa7c030a082777d 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 19 210 2.4E-55 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APECO1_RS12350 81fce031a78668643fa7c030a082777d 216 TIGRFAM TIGR00568 alkb: alkylated DNA repair protein AlkB 22 189 3.9E-76 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 APECO1_RS12350 81fce031a78668643fa7c030a082777d 216 PANTHER PTHR16557 31 216 1.8E-63 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 APECO1_RS12350 81fce031a78668643fa7c030a082777d 216 PANTHER PTHR16557 3 15 1.8E-63 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 APECO1_RS12350 81fce031a78668643fa7c030a082777d 216 Gene3D G3DSA:2.60.120.590 15 214 2.0E-61 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APECO1_RS12350 81fce031a78668643fa7c030a082777d 216 SUPERFAMILY SSF51197 16 212 1.92E-62 T 22-04-2016 APECO1_RS20965 cfa57477c416bd07dee54f1957343420 396 SUPERFAMILY SSF103473 14 391 6.93E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS20965 cfa57477c416bd07dee54f1957343420 396 Pfam PF07690 Major Facilitator Superfamily 25 343 1.0E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS20965 cfa57477c416bd07dee54f1957343420 396 Hamap MF_01189 Purine ribonucleoside efflux pump NepI [nepI]. 1 396 48.819 T 22-04-2016 IPR023680 Purine ribonucleoside efflux pump, NepI GO:0015211|GO:0015860|GO:0016021 APECO1_RS20965 cfa57477c416bd07dee54f1957343420 396 PANTHER PTHR23501:SF90 1 396 0.0 T 22-04-2016 APECO1_RS20965 cfa57477c416bd07dee54f1957343420 396 PANTHER PTHR23501 1 396 0.0 T 22-04-2016 APECO1_RS20965 cfa57477c416bd07dee54f1957343420 396 Gene3D G3DSA:1.20.1250.20 21 204 3.8E-25 T 22-04-2016 APECO1_RS20965 cfa57477c416bd07dee54f1957343420 396 Gene3D G3DSA:1.20.1250.20 216 388 1.4E-8 T 22-04-2016 APECO1_RS07180 5b86580b2e5935cabca91c91c0a12f7b 268 PANTHER PTHR24220 7 255 4.8E-124 T 22-04-2016 APECO1_RS07180 5b86580b2e5935cabca91c91c0a12f7b 268 SMART SM00382 39 228 2.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS07180 5b86580b2e5935cabca91c91c0a12f7b 268 PANTHER PTHR24220:SF81 7 255 4.8E-124 T 22-04-2016 APECO1_RS07180 5b86580b2e5935cabca91c91c0a12f7b 268 SUPERFAMILY SSF52540 5 251 2.51E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07180 5b86580b2e5935cabca91c91c0a12f7b 268 Gene3D G3DSA:3.40.50.300 3 251 1.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07180 5b86580b2e5935cabca91c91c0a12f7b 268 Pfam PF00005 ABC transporter 31 178 1.8E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS07180 5b86580b2e5935cabca91c91c0a12f7b 268 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 PANTHER PTHR30332:SF3 24 620 0.0 T 22-04-2016 APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 PANTHER PTHR30332 24 620 0.0 T 22-04-2016 APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 Pfam PF03958 Bacterial type II/III secretion system short domain 268 347 1.6E-15 T 22-04-2016 IPR005644 NolW-like APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 Pfam PF03958 Bacterial type II/III secretion system short domain 193 262 5.4E-17 T 22-04-2016 IPR005644 NolW-like APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 Pfam PF03958 Bacterial type II/III secretion system short domain 127 186 8.0E-11 T 22-04-2016 IPR005644 NolW-like APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 Pfam PF00263 Bacterial type II and III secretion system protein 433 595 2.1E-51 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 604 2.7E-195 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 540 573 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 582 596 1.1E-42 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 464 474 1.1E-42 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 559 577 1.1E-42 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 347 357 1.1E-42 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS19095 1fdbd179a49d70383ca8c4e3fc23e6e9 650 PRINTS PR00811 Bacterial general secretion pathway protein D signature 429 453 1.1E-42 T 22-04-2016 IPR001775 GspD/PilQ family APECO1_RS19510 0089d40d675f68dce7bf51cc4b18ad20 78 Gene3D G3DSA:1.10.10.10 6 54 1.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19510 0089d40d675f68dce7bf51cc4b18ad20 78 Hamap MF_01586 Ferrous iron transport protein C [feoC]. 1 78 28.929 T 22-04-2016 IPR023732 Probable [Fe-S]-dependent transcriptional repressor APECO1_RS19510 0089d40d675f68dce7bf51cc4b18ad20 78 SUPERFAMILY SSF46785 1 76 9.93E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19510 0089d40d675f68dce7bf51cc4b18ad20 78 Pfam PF09012 FeoC like transcriptional regulator 3 71 1.2E-15 T 22-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 PANTHER PTHR12124:SF42 1 361 2.8E-98 T 22-04-2016 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 Pfam PF01612 3'-5' exonuclease 1 165 3.9E-47 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 SUPERFAMILY SSF47819 190 297 1.08E-29 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 Pfam PF00570 HRDC domain 209 275 1.2E-14 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 Gene3D G3DSA:3.30.420.10 2 168 5.8E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 Hamap MF_01899 Ribonuclease D [rnd]. 1 367 44.519 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 SMART SM00474 1 167 1.9E-52 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 SUPERFAMILY SSF47819 291 368 1.83E-24 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 PANTHER PTHR12124 1 361 2.8E-98 T 22-04-2016 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 SMART SM00341 206 285 3.3E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 TIGRFAM TIGR01388 rnd: ribonuclease D 1 368 1.9E-164 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APECO1_RS09645 3c65712a4a5bce3d846cfb70b5a1001f 371 SUPERFAMILY SSF53098 1 206 4.66E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS16055 3f27b2e70f07125d4ddd351fe16929d0 525 PANTHER PTHR37465:SF1 1 181 2.3E-19 T 22-04-2016 APECO1_RS16055 3f27b2e70f07125d4ddd351fe16929d0 525 PANTHER PTHR37465 1 181 2.3E-19 T 22-04-2016 APECO1_RS16055 3f27b2e70f07125d4ddd351fe16929d0 525 Pfam PF05488 PAAR motif 10 67 5.7E-8 T 22-04-2016 IPR008727 PAAR motif APECO1_RS00260 4c9283386a4b4c31df098871a3469ac2 176 Pfam PF02525 Flavodoxin-like fold 2 167 1.1E-40 T 22-04-2016 IPR003680 Flavodoxin-like fold APECO1_RS00260 4c9283386a4b4c31df098871a3469ac2 176 PANTHER PTHR10204:SF41 1 172 3.5E-136 T 22-04-2016 APECO1_RS00260 4c9283386a4b4c31df098871a3469ac2 176 SUPERFAMILY SSF52218 2 170 2.56E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS00260 4c9283386a4b4c31df098871a3469ac2 176 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 55.293 T 22-04-2016 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APECO1_RS00260 4c9283386a4b4c31df098871a3469ac2 176 PANTHER PTHR10204 1 172 3.5E-136 T 22-04-2016 APECO1_RS00260 4c9283386a4b4c31df098871a3469ac2 176 Gene3D G3DSA:3.40.50.360 2 171 9.2E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS14915 44b40d69b97e71d40f2c9be0a731b629 611 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 46 405 1.3E-51 T 22-04-2016 IPR010090 Phage tail tape measure protein APECO1_RS14915 44b40d69b97e71d40f2c9be0a731b629 611 Pfam PF10145 Phage-related minor tail protein 89 296 3.2E-24 T 22-04-2016 IPR010090 Phage tail tape measure protein APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 Gene3D G3DSA:4.10.320.10 90 135 3.3E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 Gene3D G3DSA:3.30.559.10 144 382 1.6E-91 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 2 383 2.9E-156 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 PANTHER PTHR23151:SF47 1 384 6.3E-200 T 22-04-2016 APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 SUPERFAMILY SSF47005 90 128 2.75E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 SUPERFAMILY SSF51230 1 78 3.27E-24 T 22-04-2016 IPR011053 Single hybrid motif APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 Pfam PF00364 Biotin-requiring enzyme 3 75 1.2E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 Gene3D G3DSA:2.40.50.100 1 86 1.1E-25 T 22-04-2016 APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 SUPERFAMILY SSF52777 154 383 2.22E-87 T 22-04-2016 APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 PANTHER PTHR23151 1 384 6.3E-200 T 22-04-2016 APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 154 382 5.0E-81 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APECO1_RS23165 d60e53c272a6ef54b9f4eb445e9cee5f 384 Pfam PF02817 e3 binding domain 92 126 2.3E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APECO1_RS00790 c66a22375d3b9ea4bcd98ffa34402c4b 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 58.766 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein APECO1_RS00790 c66a22375d3b9ea4bcd98ffa34402c4b 234 PANTHER PTHR30545 1 232 8.6E-96 T 22-04-2016 APECO1_RS00790 c66a22375d3b9ea4bcd98ffa34402c4b 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 234 9.3E-105 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein APECO1_RS00790 c66a22375d3b9ea4bcd98ffa34402c4b 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 2.4E-77 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein APECO1_RS00790 c66a22375d3b9ea4bcd98ffa34402c4b 234 PANTHER PTHR30545:SF2 1 232 8.6E-96 T 22-04-2016 APECO1_RS00135 893ac3fc6cc38127aa1f29fbda66dcc0 164 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APECO1_RS00135 893ac3fc6cc38127aa1f29fbda66dcc0 164 PANTHER PTHR33695:SF1 9 163 2.1E-59 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APECO1_RS00135 893ac3fc6cc38127aa1f29fbda66dcc0 164 TIGRFAM TIGR00077 lspA: signal peptidase II 1 164 4.2E-61 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APECO1_RS00135 893ac3fc6cc38127aa1f29fbda66dcc0 164 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.026 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APECO1_RS00135 893ac3fc6cc38127aa1f29fbda66dcc0 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.5E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APECO1_RS00135 893ac3fc6cc38127aa1f29fbda66dcc0 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.5E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APECO1_RS00135 893ac3fc6cc38127aa1f29fbda66dcc0 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.5E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APECO1_RS00135 893ac3fc6cc38127aa1f29fbda66dcc0 164 Pfam PF01252 Signal peptidase (SPase) II 16 155 4.9E-35 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APECO1_RS00135 893ac3fc6cc38127aa1f29fbda66dcc0 164 PANTHER PTHR33695 9 163 2.1E-59 T 22-04-2016 APECO1_RS12790 3dd787aa486f1355b79edc973af76c63 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 86 5.1E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APECO1_RS12790 3dd787aa486f1355b79edc973af76c63 214 PANTHER PTHR11260:SF322 1 120 7.2E-79 T 22-04-2016 APECO1_RS12790 3dd787aa486f1355b79edc973af76c63 214 SUPERFAMILY SSF47616 90 207 1.38E-9 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS12790 3dd787aa486f1355b79edc973af76c63 214 Gene3D G3DSA:1.20.1050.10 100 212 2.5E-46 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS12790 3dd787aa486f1355b79edc973af76c63 214 Gene3D G3DSA:3.40.30.10 13 99 1.5E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS12790 3dd787aa486f1355b79edc973af76c63 214 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 3.4E-71 T 22-04-2016 APECO1_RS12790 3dd787aa486f1355b79edc973af76c63 214 SUPERFAMILY SSF52833 13 87 4.99E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS12790 3dd787aa486f1355b79edc973af76c63 214 PANTHER PTHR11260 1 120 7.2E-79 T 22-04-2016 APECO1_RS02145 0f0feee8b183ef8c8fdd4ac0df27ae16 80 SUPERFAMILY SSF116842 3 73 4.45E-23 T 22-04-2016 APECO1_RS02145 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Gene3D G3DSA:1.10.287.1040 6 78 8.8E-31 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APECO1_RS02145 0f0feee8b183ef8c8fdd4ac0df27ae16 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 1.0E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APECO1_RS02145 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 17.147 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APECO1_RS02145 0f0feee8b183ef8c8fdd4ac0df27ae16 80 PANTHER PTHR34137 1 80 2.1E-28 T 22-04-2016 APECO1_RS02145 0f0feee8b183ef8c8fdd4ac0df27ae16 80 Pfam PF02609 Exonuclease VII small subunit 11 62 6.4E-22 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APECO1_RS02145 0f0feee8b183ef8c8fdd4ac0df27ae16 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APECO1_RS02145 0f0feee8b183ef8c8fdd4ac0df27ae16 80 PIRSF PIRSF006488 1 80 8.9E-25 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APECO1_RS18230 2c78583efca34b5bfbb69d2a36d4f27d 174 PANTHER PTHR10094 1 144 7.4E-79 T 22-04-2016 APECO1_RS18230 2c78583efca34b5bfbb69d2a36d4f27d 174 SUPERFAMILY SSF55718 42 137 5.42E-22 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APECO1_RS18230 2c78583efca34b5bfbb69d2a36d4f27d 174 Pfam PF02036 SCP-2 sterol transfer family 45 133 1.4E-17 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APECO1_RS18230 2c78583efca34b5bfbb69d2a36d4f27d 174 PIRSF PIRSF025550 1 173 1.5E-83 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT APECO1_RS18230 2c78583efca34b5bfbb69d2a36d4f27d 174 PANTHER PTHR10094:SF16 1 144 7.4E-79 T 22-04-2016 APECO1_RS18230 2c78583efca34b5bfbb69d2a36d4f27d 174 Gene3D G3DSA:3.30.1050.10 58 135 3.1E-12 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APECO1_RS18650 b96efb474059a42b2d95c3386f11e1c2 162 PIRSF PIRSF018472 2 162 1.3E-57 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type APECO1_RS18650 b96efb474059a42b2d95c3386f11e1c2 162 Pfam PF04093 rod shape-determining protein MreD 5 155 1.7E-46 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APECO1_RS18650 b96efb474059a42b2d95c3386f11e1c2 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 5.6E-42 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APECO1_RS18650 b96efb474059a42b2d95c3386f11e1c2 162 PANTHER PTHR37484 1 162 4.5E-74 T 22-04-2016 APECO1_RS17180 b57bf8bee9bfcb7e4e1b13a9313dec55 219 Gene3D G3DSA:3.40.50.300 1 214 1.2E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17180 b57bf8bee9bfcb7e4e1b13a9313dec55 219 PANTHER PTHR24220:SF117 3 198 2.8E-61 T 22-04-2016 APECO1_RS17180 b57bf8bee9bfcb7e4e1b13a9313dec55 219 Pfam PF00005 ABC transporter 22 153 1.4E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS17180 b57bf8bee9bfcb7e4e1b13a9313dec55 219 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS17180 b57bf8bee9bfcb7e4e1b13a9313dec55 219 SUPERFAMILY SSF52540 2 213 1.47E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17180 b57bf8bee9bfcb7e4e1b13a9313dec55 219 SMART SM00382 30 200 2.9E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS17180 b57bf8bee9bfcb7e4e1b13a9313dec55 219 PANTHER PTHR24220 3 198 2.8E-61 T 22-04-2016 APECO1_RS15790 b60b0b68dbe3564a1262cfea82549c27 82 Gene3D G3DSA:2.10.260.10 1 82 2.9E-30 T 22-04-2016 APECO1_RS15790 b60b0b68dbe3564a1262cfea82549c27 82 PANTHER PTHR40516 3 82 1.6E-26 T 22-04-2016 APECO1_RS15790 b60b0b68dbe3564a1262cfea82549c27 82 SMART SM00966 7 52 7.5E-11 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APECO1_RS15790 b60b0b68dbe3564a1262cfea82549c27 82 SUPERFAMILY SSF89447 4 75 5.58E-22 T 22-04-2016 APECO1_RS15790 b60b0b68dbe3564a1262cfea82549c27 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 51 7.4E-12 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APECO1_RS23695 164a69b227c72d130e60b37670400a9f 158 Gene3D G3DSA:3.40.140.10 36 158 1.9E-50 T 22-04-2016 APECO1_RS23695 164a69b227c72d130e60b37670400a9f 158 SUPERFAMILY SSF102712 83 124 7.06E-5 T 22-04-2016 APECO1_RS23695 164a69b227c72d130e60b37670400a9f 158 PANTHER PTHR30471 15 158 7.6E-111 T 22-04-2016 APECO1_RS23695 164a69b227c72d130e60b37670400a9f 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APECO1_RS23695 164a69b227c72d130e60b37670400a9f 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 2.8E-44 T 22-04-2016 IPR001405 RadC protein APECO1_RS23695 164a69b227c72d130e60b37670400a9f 158 Pfam PF04002 RadC-like JAB domain 38 157 1.2E-43 T 22-04-2016 IPR025657 RadC-like JAB domain APECO1_RS23695 164a69b227c72d130e60b37670400a9f 158 PANTHER PTHR30471:SF4 15 158 7.6E-111 T 22-04-2016 APECO1_RS18215 d28ed1555987eee3fe928db57f6fd045 147 SUPERFAMILY SSF50475 4 139 2.88E-13 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS18215 d28ed1555987eee3fe928db57f6fd045 147 PIRSF PIRSF009554 1 145 2.5E-62 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 APECO1_RS18215 d28ed1555987eee3fe928db57f6fd045 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 36.074 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 APECO1_RS18215 d28ed1555987eee3fe928db57f6fd045 147 Gene3D G3DSA:2.30.110.10 25 139 1.0E-5 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APECO1_RS16605 4038b9ed5a7c2c9f05d9633fcaf6794c 169 PANTHER PTHR37941 1 168 8.8E-50 T 22-04-2016 APECO1_RS16605 4038b9ed5a7c2c9f05d9633fcaf6794c 169 SUPERFAMILY SSF158668 2 167 7.59E-53 T 22-04-2016 APECO1_RS16605 4038b9ed5a7c2c9f05d9633fcaf6794c 169 Pfam PF05068 Mannitol repressor 5 167 6.9E-51 T 22-04-2016 IPR007761 Mannitol repressor APECO1_RS16605 4038b9ed5a7c2c9f05d9633fcaf6794c 169 Gene3D G3DSA:1.20.120.330 2 168 8.5E-62 T 22-04-2016 APECO1_RS11995 7927ac49e2e617e4dd7eeba15d52bc70 79 Pfam PF10808 Protein of unknown function (DUF2542) 1 79 6.6E-46 T 22-04-2016 IPR020155 Uncharacterised protein family YeiS GO:0016021 APECO1_RS11995 7927ac49e2e617e4dd7eeba15d52bc70 79 ProDom PD058881 MEMBRANE TRANSMEMBRANE YEIS INNER 1 79 1.0E-32 T 22-04-2016 IPR020155 Uncharacterised protein family YeiS GO:0016021 APECO1_RS07720 250e105ce2da46186be36f087af192b2 791 SUPERFAMILY SSF49899 636 787 9.85E-5 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APECO1_RS07720 250e105ce2da46186be36f087af192b2 791 PANTHER PTHR35191 3 359 3.9E-46 T 22-04-2016 APECO1_RS07720 250e105ce2da46186be36f087af192b2 791 Gene3D G3DSA:2.60.40.1120 6 82 2.5E-6 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain APECO1_RS07720 250e105ce2da46186be36f087af192b2 791 Pfam PF08400 Prophage tail fibre N-terminal 3 132 1.9E-66 T 22-04-2016 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal APECO1_RS07720 250e105ce2da46186be36f087af192b2 791 SUPERFAMILY SSF49464 5 82 1.02E-5 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APECO1_RS21650 30032feb3765c440da7c5c1fda52ee32 246 SUPERFAMILY SSF69618 1 245 4.58E-53 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21650 30032feb3765c440da7c5c1fda52ee32 246 Gene3D G3DSA:3.40.50.10090 2 119 3.6E-10 T 22-04-2016 APECO1_RS21650 30032feb3765c440da7c5c1fda52ee32 246 Gene3D G3DSA:3.40.50.10090 123 245 7.0E-11 T 22-04-2016 APECO1_RS21650 30032feb3765c440da7c5c1fda52ee32 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 1.6E-39 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APECO1_RS21650 30032feb3765c440da7c5c1fda52ee32 246 PANTHER PTHR38042 1 246 5.3E-90 T 22-04-2016 APECO1_RS21650 30032feb3765c440da7c5c1fda52ee32 246 PANTHER PTHR38042:SF1 1 246 5.3E-90 T 22-04-2016 APECO1_RS02965 e12fa98a49523be028e9ff30aee67f2c 136 PANTHER PTHR30437 1 134 1.6E-74 T 22-04-2016 APECO1_RS02965 e12fa98a49523be028e9ff30aee67f2c 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 1.9E-20 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APECO1_RS02965 e12fa98a49523be028e9ff30aee67f2c 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.797 T 22-04-2016 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 APECO1_RS02965 e12fa98a49523be028e9ff30aee67f2c 136 Pfam PF14760 Rnk N-terminus 4 42 1.7E-10 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain APECO1_RS02965 e12fa98a49523be028e9ff30aee67f2c 136 Gene3D G3DSA:3.10.50.30 46 135 4.4E-30 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APECO1_RS02965 e12fa98a49523be028e9ff30aee67f2c 136 SUPERFAMILY SSF54534 49 127 1.96E-18 T 22-04-2016 APECO1_RS02965 e12fa98a49523be028e9ff30aee67f2c 136 PANTHER PTHR30437:SF5 1 134 1.6E-74 T 22-04-2016 APECO1_RS02965 e12fa98a49523be028e9ff30aee67f2c 136 Gene3D G3DSA:1.10.286.20 1 44 1.7E-22 T 22-04-2016 APECO1_RS20080 6a0e0a2b2f633b3cc2fa5da83f47bb3a 304 Gene3D G3DSA:3.40.50.1980 172 304 3.3E-26 T 22-04-2016 APECO1_RS20080 6a0e0a2b2f633b3cc2fa5da83f47bb3a 304 Gene3D G3DSA:3.40.50.1980 50 170 1.0E-30 T 22-04-2016 APECO1_RS20080 6a0e0a2b2f633b3cc2fa5da83f47bb3a 304 SUPERFAMILY SSF53807 50 304 3.81E-58 T 22-04-2016 APECO1_RS20080 6a0e0a2b2f633b3cc2fa5da83f47bb3a 304 PANTHER PTHR30535 50 303 3.0E-73 T 22-04-2016 APECO1_RS20080 6a0e0a2b2f633b3cc2fa5da83f47bb3a 304 Pfam PF01497 Periplasmic binding protein 53 281 1.1E-32 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APECO1_RS20080 6a0e0a2b2f633b3cc2fa5da83f47bb3a 304 PANTHER PTHR30535:SF4 50 303 3.0E-73 T 22-04-2016 APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 SUPERFAMILY SSF52799 281 429 9.25E-25 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 374 384 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 Gene3D G3DSA:3.90.190.10 281 430 7.7E-24 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 PANTHER PTHR10159:SF370 286 430 3.6E-41 T 22-04-2016 APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 PANTHER PTHR10159:SF370 58 270 3.6E-41 T 22-04-2016 APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 SMART SM00195 298 430 3.2E-36 T 22-04-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 Pfam PF00782 Dual specificity phosphatase, catalytic domain 306 429 8.8E-26 T 22-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 PANTHER PTHR10159 58 270 3.6E-41 T 22-04-2016 IPR024950 Dual specificity phosphatase APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 SMART SM00404 335 425 0.0018 T 22-04-2016 IPR003595 Protein-tyrosine phosphatase, catalytic APECO1_RS07865 d57c4717347b7a8b6ae7b835cd176382 430 PANTHER PTHR10159 286 430 3.6E-41 T 22-04-2016 IPR024950 Dual specificity phosphatase APECO1_RS14265 ea1ad55125463722651d11a381159a9c 206 Gene3D G3DSA:1.25.40.10 53 186 7.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14265 ea1ad55125463722651d11a381159a9c 206 PANTHER PTHR38035 2 206 1.9E-92 T 22-04-2016 APECO1_RS14265 ea1ad55125463722651d11a381159a9c 206 PIRSF PIRSF006170 1 206 1.5E-59 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 APECO1_RS14265 ea1ad55125463722651d11a381159a9c 206 SUPERFAMILY SSF48452 88 186 8.95E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14265 ea1ad55125463722651d11a381159a9c 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.4E-55 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain APECO1_RS21555 44aac1e74efdb63cbac5ad03edf9c0c8 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 66.377 T 22-04-2016 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|UniPathway: UPA00566 APECO1_RS21555 44aac1e74efdb63cbac5ad03edf9c0c8 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 2.0E-129 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain APECO1_RS21555 44aac1e74efdb63cbac5ad03edf9c0c8 376 Gene3D G3DSA:3.40.50.2000 211 371 4.6E-68 T 22-04-2016 APECO1_RS21555 44aac1e74efdb63cbac5ad03edf9c0c8 376 PANTHER PTHR18964:SF2 1 371 1.3E-216 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APECO1_RS21555 44aac1e74efdb63cbac5ad03edf9c0c8 376 Gene3D G3DSA:3.40.50.2000 2 210 1.6E-89 T 22-04-2016 APECO1_RS21555 44aac1e74efdb63cbac5ad03edf9c0c8 376 PANTHER PTHR18964 1 371 1.3E-216 T 22-04-2016 APECO1_RS21555 44aac1e74efdb63cbac5ad03edf9c0c8 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 5.5E-187 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APECO1_RS21555 44aac1e74efdb63cbac5ad03edf9c0c8 376 SUPERFAMILY SSF53756 2 371 5.14E-143 T 22-04-2016 APECO1_RS19890 afa4b644c622adbe38f60ca339173efe 185 Gene3D G3DSA:3.40.1000.10 52 183 5.7E-4 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich APECO1_RS19890 afa4b644c622adbe38f60ca339173efe 185 Pfam PF08786 Domain of unknown function (DUF1795) 51 181 1.1E-29 T 22-04-2016 IPR014894 Protein DcrB APECO1_RS16845 a3700dc646200d2738328576d554a272 166 SUPERFAMILY SSF49401 31 166 1.24E-19 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS16845 a3700dc646200d2738328576d554a272 166 Gene3D G3DSA:2.60.40.1090 22 166 3.3E-13 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS16845 a3700dc646200d2738328576d554a272 166 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 109 132 1.4E-104 T 22-04-2016 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 APECO1_RS16845 a3700dc646200d2738328576d554a272 166 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 5 26 1.4E-104 T 22-04-2016 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 APECO1_RS16845 a3700dc646200d2738328576d554a272 166 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 71 85 1.4E-104 T 22-04-2016 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 APECO1_RS16845 a3700dc646200d2738328576d554a272 166 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 150 166 1.4E-104 T 22-04-2016 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 APECO1_RS16845 a3700dc646200d2738328576d554a272 166 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 133 149 1.4E-104 T 22-04-2016 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 APECO1_RS16845 a3700dc646200d2738328576d554a272 166 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 27 50 1.4E-104 T 22-04-2016 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 APECO1_RS16845 a3700dc646200d2738328576d554a272 166 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 51 69 1.4E-104 T 22-04-2016 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 APECO1_RS16845 a3700dc646200d2738328576d554a272 166 PRINTS PR01613 Escherichia coli P pili tip fibrillum PapF protein signature 87 108 1.4E-104 T 22-04-2016 IPR005430 P pili tip fibrillum PapF protein GO:0009289|GO:0009405 APECO1_RS16845 a3700dc646200d2738328576d554a272 166 Pfam PF00419 Fimbrial protein 23 165 5.3E-18 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS03535 9e441c32db8af40efbbc54336b0dd9dc 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.8E-15 T 22-04-2016 IPR012994 Membrane bound YbgT-like APECO1_RS03535 9e441c32db8af40efbbc54336b0dd9dc 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 2.4E-20 T 22-04-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545|UniPathway: UPA00705 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 PANTHER PTHR11228 239 381 2.8E-117 T 22-04-2016 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 PANTHER PTHR11228 21 218 2.8E-117 T 22-04-2016 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 Pfam PF04055 Radical SAM superfamily 20 169 1.3E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 21 44 - T 22-04-2016 IPR007087 Zinc finger, C2H2 GO:0046872 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 141 402 3.0E-18 T 22-04-2016 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 Gene3D G3DSA:3.20.20.70 20 358 1.2E-44 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 Pfam PF13186 Iron-sulfur cluster-binding domain 283 343 2.1E-10 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 PANTHER PTHR11228:SF24 239 381 2.8E-117 T 22-04-2016 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 PANTHER PTHR11228:SF24 21 218 2.8E-117 T 22-04-2016 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 Pfam PF13353 4Fe-4S single cluster domain 19 126 1.2E-4 T 22-04-2016 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 11 390 7.8E-156 T 22-04-2016 IPR023867 Anaerobic sulphatase maturase, radical SAM GO:0016491 APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 282 371 1.2E-18 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain APECO1_RS21630 c743a651d68f1be60ca7e9cb858979cb 411 SUPERFAMILY SSF102114 20 352 6.41E-40 T 22-04-2016 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 Gene3D G3DSA:3.80.30.10 116 291 1.3E-51 T 22-04-2016 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 Gene3D G3DSA:3.30.70.20 47 93 6.4E-4 T 22-04-2016 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 SUPERFAMILY SSF102114 99 253 1.45E-11 T 22-04-2016 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 SUPERFAMILY SSF102114 35 67 1.45E-11 T 22-04-2016 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 Pfam PF13353 4Fe-4S single cluster domain 34 144 3.0E-10 T 22-04-2016 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 PANTHER PTHR30352 94 292 2.8E-216 T 22-04-2016 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 PANTHER PTHR30352 1 76 2.8E-216 T 22-04-2016 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 ProSitePatterns PS01087 Radical activating enzymes signature. 35 56 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 Pfam PF04055 Radical SAM superfamily 41 222 9.7E-23 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 PANTHER PTHR30352:SF10 94 292 2.8E-216 T 22-04-2016 APECO1_RS22550 5c43ed1107da4eea74ba9c731d47cc6b 292 PANTHER PTHR30352:SF10 1 76 2.8E-216 T 22-04-2016 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 PANTHER PTHR10657:SF13 1 175 1.6E-271 T 22-04-2016 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 PANTHER PTHR10657:SF13 203 516 1.6E-271 T 22-04-2016 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 PANTHER PTHR10657 1 175 1.6E-271 T 22-04-2016 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 PANTHER PTHR10657 203 516 1.6E-271 T 22-04-2016 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 Gene3D G3DSA:3.10.50.40 258 379 2.1E-29 T 22-04-2016 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 Pfam PF13145 PPIC-type PPIASE domain 247 369 4.1E-24 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 Pfam PF13624 SurA N-terminal domain 1 165 2.5E-54 T 22-04-2016 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 Gene3D G3DSA:1.10.3120.10 43 122 9.0E-4 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 SUPERFAMILY SSF54534 225 355 3.34E-23 T 22-04-2016 APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 SUPERFAMILY SSF109998 203 239 4.32E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain APECO1_RS02245 6107950a8bfdc532059d2b072baf9356 623 SUPERFAMILY SSF109998 39 169 4.32E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain APECO1_RS01525 8c03397fdac9d15bcb93c61a8738523c 195 Pfam PF16449 Fimbrillin MatB 26 193 1.7E-90 T 22-04-2016 IPR016514 Fimbrial protein MatB APECO1_RS01525 8c03397fdac9d15bcb93c61a8738523c 195 PIRSF PIRSF007320 1 195 3.5E-118 T 22-04-2016 IPR016514 Fimbrial protein MatB APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 PANTHER PTHR21581:SF4 32 403 3.6E-209 T 22-04-2016 APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 5.678452E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 5.678452E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 5.678452E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 SMART SM00936 292 383 1.8E-33 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 2.3E-101 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 Gene3D G3DSA:3.40.710.10 37 290 1.1E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 SUPERFAMILY SSF56601 10 292 6.71E-76 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 PANTHER PTHR21581 32 403 3.6E-209 T 22-04-2016 APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 Gene3D G3DSA:2.60.410.10 292 383 4.0E-32 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 2.5E-24 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS03070 67e71e11a5d766dba6838af555ed17d3 403 SUPERFAMILY SSF69189 292 385 7.85E-25 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 SUPERFAMILY SSF51161 1 256 6.38E-81 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 Gene3D G3DSA:1.10.166.10 1 70 5.3E-33 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 6.1E-13 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 4.9E-26 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 PANTHER PTHR19136:SF52 13 273 5.0E-138 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 1.0E-164 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.68 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 PANTHER PTHR19136 13 273 5.0E-138 T 22-04-2016 APECO1_RS00880 f398bd7063a0157d76c2caf44bace3b9 274 Gene3D G3DSA:2.160.10.10 89 255 2.2E-64 T 22-04-2016 APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Pfam PF01726 LexA DNA binding domain 1 65 1.3E-31 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Gene3D G3DSA:1.10.10.10 1 69 7.0E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 SUPERFAMILY SSF46785 3 70 6.28E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 2.35E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 2.35E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 2.35E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 3.2E-87 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.817 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 SUPERFAMILY SSF51306 76 198 1.27E-38 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Pfam PF00717 Peptidase S24-like 114 180 6.4E-16 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PANTHER PTHR33516 1 202 2.2E-108 T 22-04-2016 APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 Gene3D G3DSA:2.10.109.10 76 198 2.8E-47 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APECO1_RS23075 0f8aa8f591e0c3d6aa927c9a32cd25c9 202 PANTHER PTHR33516:SF2 1 202 2.2E-108 T 22-04-2016 APECO1_RS23815 7e09e2490fdf0d6681ee9c58b1020a0e 173 Pfam PF08388 Group II intron, maturase-specific domain 112 172 1.5E-13 T 22-04-2016 IPR013597 Group II intron, maturase-specific APECO1_RS23815 7e09e2490fdf0d6681ee9c58b1020a0e 173 SUPERFAMILY SSF56672 2 167 3.95E-19 T 22-04-2016 APECO1_RS23815 7e09e2490fdf0d6681ee9c58b1020a0e 173 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 9 96 3.4E-18 T 22-04-2016 IPR000477 Reverse transcriptase domain APECO1_RS18450 9e16eff5a04c7b0ce378fdc814bd2127 185 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 27.239 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 APECO1_RS18450 9e16eff5a04c7b0ce378fdc814bd2127 185 Gene3D G3DSA:2.60.450.10 29 163 4.9E-43 T 22-04-2016 APECO1_RS18450 9e16eff5a04c7b0ce378fdc814bd2127 185 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 166 9.6E-52 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 APECO1_RS18450 9e16eff5a04c7b0ce378fdc814bd2127 185 PANTHER PTHR36504 1 184 2.6E-57 T 22-04-2016 APECO1_RS18450 9e16eff5a04c7b0ce378fdc814bd2127 185 Pfam PF03968 OstA-like protein 37 149 1.6E-32 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal APECO1_RS21840 71750ab58b7260161c7f9c5e29858c2e 407 PANTHER PTHR30569 11 403 2.8E-34 T 22-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 APECO1_RS21840 71750ab58b7260161c7f9c5e29858c2e 407 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 10 399 5.8E-14 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS17745 31e0509b5faa61708629452d24f29855 66 Hamap MF_00525 Surface composition regulator [glgS]. 1 65 26.972 T 22-04-2016 IPR015065 Surface composition regulator APECO1_RS17745 31e0509b5faa61708629452d24f29855 66 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 1 66 3.0E-34 T 22-04-2016 IPR015065 Surface composition regulator APECO1_RS17745 31e0509b5faa61708629452d24f29855 66 SUPERFAMILY SSF109747 1 66 6.41E-43 T 22-04-2016 IPR015065 Surface composition regulator APECO1_RS17745 31e0509b5faa61708629452d24f29855 66 Pfam PF08971 Glycogen synthesis protein 1 66 1.4E-40 T 22-04-2016 IPR015065 Surface composition regulator APECO1_RS17745 31e0509b5faa61708629452d24f29855 66 Gene3D G3DSA:1.20.970.20 1 66 2.5E-40 T 22-04-2016 IPR015065 Surface composition regulator APECO1_RS05335 f17b34fd569a6aff4ae6d0572738da53 188 SUPERFAMILY SSF81342 5 181 1.88E-40 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APECO1_RS05335 f17b34fd569a6aff4ae6d0572738da53 188 PANTHER PTHR30529 2 184 2.1E-98 T 22-04-2016 APECO1_RS05335 f17b34fd569a6aff4ae6d0572738da53 188 Gene3D G3DSA:1.20.950.20 89 174 1.5E-4 T 22-04-2016 APECO1_RS05335 f17b34fd569a6aff4ae6d0572738da53 188 PANTHER PTHR30529:SF5 2 184 2.1E-98 T 22-04-2016 APECO1_RS05335 f17b34fd569a6aff4ae6d0572738da53 188 Pfam PF01292 Prokaryotic cytochrome b561 9 180 1.4E-28 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APECO1_RS12660 43ebc87551869fac96662ddce61711a9 485 PANTHER PTHR22773 1 485 7.2E-208 T 22-04-2016 APECO1_RS12660 43ebc87551869fac96662ddce61711a9 485 PANTHER PTHR22773:SF41 1 485 7.2E-208 T 22-04-2016 APECO1_RS12660 43ebc87551869fac96662ddce61711a9 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.886 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APECO1_RS12660 43ebc87551869fac96662ddce61711a9 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 3.7E-150 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APECO1_RS12660 43ebc87551869fac96662ddce61711a9 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 8.0E-92 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APECO1_RS07455 f4f3f4f364fcf14412fba48f9be9d02f 62 Pfam PF06688 Protein of unknown function (DUF1187) 2 62 5.8E-39 T 22-04-2016 IPR009572 Protein of unknown function DUF1187 APECO1_RS07455 f4f3f4f364fcf14412fba48f9be9d02f 62 ProDom PD055514 YDAC STY2075 PLASMID YHEB ECS1931 1 62 3.0E-29 T 22-04-2016 IPR009572 Protein of unknown function DUF1187 APECO1_RS03395 877ceceebdc4ebdd67e6c77f92e16907 557 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 3.4E-300 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APECO1_RS03395 877ceceebdc4ebdd67e6c77f92e16907 557 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 557 34.305 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APECO1_RS03395 877ceceebdc4ebdd67e6c77f92e16907 557 Pfam PF03814 Potassium-transporting ATPase A subunit 11 556 2.0E-236 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APECO1_RS03395 877ceceebdc4ebdd67e6c77f92e16907 557 PANTHER PTHR30607 2 557 0.0 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APECO1_RS03395 877ceceebdc4ebdd67e6c77f92e16907 557 PIRSF PIRSF001294 1 557 4.7E-231 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APECO1_RS08605 178bd59e4db9f686a6bf537347b3f52c 462 PIRSF PIRSF000204 1 462 5.6E-239 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APECO1_RS08605 178bd59e4db9f686a6bf537347b3f52c 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 1.9E-200 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APECO1_RS08605 178bd59e4db9f686a6bf537347b3f52c 462 SUPERFAMILY SSF52467 289 462 1.54E-78 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS08605 178bd59e4db9f686a6bf537347b3f52c 462 PANTHER PTHR10160 4 462 1.2E-255 T 22-04-2016 APECO1_RS08605 178bd59e4db9f686a6bf537347b3f52c 462 Gene3D G3DSA:3.40.50.1220 288 462 1.6E-92 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 SUPERFAMILY SSF52540 1253 1433 1.49E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 SUPERFAMILY SSF52540 21 55 1.49E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PIRSF PIRSF005246 1 1486 0.0 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 7.4E-15 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 Pfam PF04310 MukB N-terminal 2 227 1.6E-124 T 22-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 SUPERFAMILY SSF52540 22 224 5.56E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937 847 878 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937 1426 1459 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937 99 426 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937 560 814 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937 897 938 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937 977 1116 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937 444 529 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937 1212 1248 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937:SF201 847 878 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937:SF201 1426 1459 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937:SF201 99 426 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937:SF201 560 814 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937:SF201 897 938 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937:SF201 977 1116 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937:SF201 444 529 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 PANTHER PTHR18937:SF201 1212 1248 0.0 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 Gene3D G3DSA:3.40.1140.10 1 226 1.3E-50 T 22-04-2016 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.393 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 APECO1_RS04730 fdf8da7cbfbe297e2f8dcd610d2701a0 1486 Pfam PF16330 MukB hinge domain 645 810 5.4E-74 T 22-04-2016 IPR032520 MukB, hinge domain APECO1_RS17775 01925f3d096af700b98f836e91caa500 433 PANTHER PTHR39569 2 433 1.7E-159 T 22-04-2016 APECO1_RS17775 01925f3d096af700b98f836e91caa500 433 SUPERFAMILY SSF55154 1 217 4.09E-54 T 22-04-2016 IPR033469 CYTH-like domain APECO1_RS17775 01925f3d096af700b98f836e91caa500 433 PANTHER PTHR39569:SF1 2 433 1.7E-159 T 22-04-2016 APECO1_RS17775 01925f3d096af700b98f836e91caa500 433 Gene3D G3DSA:2.40.320.10 1 212 8.6E-50 T 22-04-2016 IPR023577 CYTH domain APECO1_RS17775 01925f3d096af700b98f836e91caa500 433 Pfam PF01928 CYTH domain 3 196 1.6E-38 T 22-04-2016 IPR023577 CYTH domain APECO1_RS17775 01925f3d096af700b98f836e91caa500 433 SMART SM01118 2 202 1.1E-41 T 22-04-2016 IPR023577 CYTH domain APECO1_RS01835 bcbd4cdb0268ca8a2c022422865ad231 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 3.6E-60 T 22-04-2016 IPR018636 Protein of unknown function DUF2058 APECO1_RS14500 ee78ffbef5892c3fe3e156952182ddef 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 135.588 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APECO1_RS14500 ee78ffbef5892c3fe3e156952182ddef 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.0E-107 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APECO1_RS14500 ee78ffbef5892c3fe3e156952182ddef 243 PANTHER PTHR30456:SF0 2 243 2.1E-152 T 22-04-2016 APECO1_RS14500 ee78ffbef5892c3fe3e156952182ddef 243 PANTHER PTHR30456 2 243 2.1E-152 T 22-04-2016 APECO1_RS14500 ee78ffbef5892c3fe3e156952182ddef 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 2.8E-117 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APECO1_RS14500 ee78ffbef5892c3fe3e156952182ddef 243 SUPERFAMILY SSF63892 4 241 5.89E-104 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APECO1_RS14500 ee78ffbef5892c3fe3e156952182ddef 243 Gene3D G3DSA:3.20.20.70 3 242 7.0E-115 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 PANTHER PTHR30579:SF2 1 296 3.6E-160 T 22-04-2016 APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 Pfam PF03466 LysR substrate binding domain 93 288 1.2E-11 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 9.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 PANTHER PTHR30579 1 296 3.6E-160 T 22-04-2016 APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 SUPERFAMILY SSF53850 92 289 1.57E-18 T 22-04-2016 APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 SUPERFAMILY SSF46785 4 110 7.37E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 Gene3D G3DSA:1.10.10.10 1 73 6.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.997 T 22-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 Gene3D G3DSA:3.40.190.10 92 196 1.5E-38 T 22-04-2016 APECO1_RS16530 83bddd0a987410c35d7911df4a93d36f 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 9.4E-113 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP APECO1_RS10650 54b06c1f883753b0fc690f88bc3b8ec7 177 Gene3D G3DSA:1.10.530.40 29 174 8.4E-30 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 APECO1_RS10650 54b06c1f883753b0fc690f88bc3b8ec7 177 PANTHER PTHR38107:SF2 1 177 1.3E-73 T 22-04-2016 APECO1_RS10650 54b06c1f883753b0fc690f88bc3b8ec7 177 PANTHER PTHR38107 1 177 1.3E-73 T 22-04-2016 APECO1_RS10650 54b06c1f883753b0fc690f88bc3b8ec7 177 SUPERFAMILY SSF53955 6 172 4.19E-35 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS10650 54b06c1f883753b0fc690f88bc3b8ec7 177 Pfam PF00959 Phage lysozyme 48 166 7.8E-31 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 Pfam PF01743 Poly A polymerase head domain 51 182 1.0E-39 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 Gene3D G3DSA:1.10.3090.10 182 416 7.1E-52 T 22-04-2016 APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 Pfam PF12626 Polymerase A arginine-rich C-terminus 327 445 1.5E-40 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 SUPERFAMILY SSF81891 180 418 1.96E-52 T 22-04-2016 APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 Gene3D G3DSA:3.30.460.10 33 181 6.1E-51 T 22-04-2016 APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 20 447 1.3E-157 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 PANTHER PTHR13734 4 316 5.1E-140 T 22-04-2016 APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 209 270 1.5E-20 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 SUPERFAMILY SSF81301 23 178 2.07E-40 T 22-04-2016 APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 13 449 38.846 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 APECO1_RS00775 75691a76a2b477d91a8a2ad05904cfe9 454 PANTHER PTHR13734:SF47 4 316 5.1E-140 T 22-04-2016 APECO1_RS13745 0258db62944cfdf2ec2a4525305a48dc 95 SUPERFAMILY SSF159133 1 94 1.44E-30 T 22-04-2016 IPR023414 Ethanolamine utilization protein-like domain APECO1_RS13745 0258db62944cfdf2ec2a4525305a48dc 95 PANTHER PTHR36539:SF2 1 95 2.3E-78 T 22-04-2016 APECO1_RS13745 0258db62944cfdf2ec2a4525305a48dc 95 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 83 7.0E-37 T 22-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml APECO1_RS13745 0258db62944cfdf2ec2a4525305a48dc 95 PANTHER PTHR36539 1 95 2.3E-78 T 22-04-2016 APECO1_RS13745 0258db62944cfdf2ec2a4525305a48dc 95 Gene3D G3DSA:2.40.50.220 1 95 5.9E-35 T 22-04-2016 IPR023414 Ethanolamine utilization protein-like domain APECO1_RS13745 0258db62944cfdf2ec2a4525305a48dc 95 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 1.4E-29 T 22-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PANTHER PTHR30409 1 310 6.2E-149 T 22-04-2016 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 SUPERFAMILY SSF53633 3 308 9.82E-84 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 Pfam PF00696 Amino acid kinase family 3 288 5.8E-30 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PIRSF PIRSF000723 1 310 4.7E-122 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 Gene3D G3DSA:3.40.1160.10 2 308 6.2E-108 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PANTHER PTHR30409:SF1 1 310 6.2E-149 T 22-04-2016 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 TIGRFAM TIGR00746 arcC: carbamate kinase 3 309 4.2E-116 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 1.4E-65 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 1.4E-65 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 1.4E-65 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 1.4E-65 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 1.4E-65 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 1.4E-65 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS16325 21234580f657633dcb2452f6b171e3dc 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 1.4E-65 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS18890 96f545bd975c62f4f8fcabb13c8c5ec6 157 PANTHER PTHR38692 1 157 6.2E-87 T 22-04-2016 APECO1_RS18890 96f545bd975c62f4f8fcabb13c8c5ec6 157 PANTHER PTHR38692:SF1 1 157 6.2E-87 T 22-04-2016 APECO1_RS18890 96f545bd975c62f4f8fcabb13c8c5ec6 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 5.0E-59 T 22-04-2016 IPR007456 Smg APECO1_RS18890 96f545bd975c62f4f8fcabb13c8c5ec6 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.538 T 22-04-2016 IPR007456 Smg APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 PANTHER PTHR11615:SF163 386 759 0.0 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 PANTHER PTHR11615:SF163 3 368 0.0 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 Gene3D G3DSA:2.40.40.20 594 752 9.4E-53 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 SUPERFAMILY SSF50692 613 756 2.08E-37 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 441 458 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 SUPERFAMILY SSF53706 28 615 2.62E-158 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 Gene3D G3DSA:3.90.55.10 443 549 1.2E-35 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 9 757 0.0 T 22-04-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 Gene3D G3DSA:3.40.50.740 30 130 1.3E-45 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 Gene3D G3DSA:3.40.50.740 337 442 1.3E-45 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 Pfam PF00384 Molybdopterin oxidoreductase 38 499 4.2E-112 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 PANTHER PTHR11615 386 759 0.0 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 PANTHER PTHR11615 3 368 0.0 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 Pfam PF01568 Molydopterin dinucleotide binding domain 619 722 8.4E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 Gene3D G3DSA:3.40.228.10 131 336 1.5E-54 T 22-04-2016 APECO1_RS20370 a8af0b8344e206ae128c88a555cc050e 759 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 657 684 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APECO1_RS20970 f3b16c26d8b8718a1f5f2fd3d3d5fb58 150 Pfam PF06711 Protein of unknown function (DUF1198) 1 142 4.2E-66 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 APECO1_RS20970 f3b16c26d8b8718a1f5f2fd3d3d5fb58 150 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 145 5.0E-80 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 APECO1_RS10545 ab4a09c46214faf4950ed9918c30e9c2 1160 PANTHER PTHR36251 1 835 0.0 T 22-04-2016 APECO1_RS10545 ab4a09c46214faf4950ed9918c30e9c2 1160 PANTHER PTHR36251 867 1135 0.0 T 22-04-2016 APECO1_RS10545 ab4a09c46214faf4950ed9918c30e9c2 1160 PANTHER PTHR36251:SF2 1 835 0.0 T 22-04-2016 APECO1_RS10545 ab4a09c46214faf4950ed9918c30e9c2 1160 PANTHER PTHR36251:SF2 867 1135 0.0 T 22-04-2016 APECO1_RS10545 ab4a09c46214faf4950ed9918c30e9c2 1160 Gene3D G3DSA:2.60.40.10 618 709 1.4E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS10545 ab4a09c46214faf4950ed9918c30e9c2 1160 SUPERFAMILY SSF49265 617 719 1.56E-5 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APECO1_RS10545 ab4a09c46214faf4950ed9918c30e9c2 1160 Pfam PF13550 Putative phage tail protein 330 497 2.5E-40 T 22-04-2016 IPR032876 Tip attachment protein J APECO1_RS10545 ab4a09c46214faf4950ed9918c30e9c2 1160 Pfam PF09327 Domain of unknown function (DUF1983) 873 953 2.1E-22 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 APECO1_RS10545 ab4a09c46214faf4950ed9918c30e9c2 1160 Pfam PF12421 Fibronectin type III protein 977 1118 6.7E-37 T 22-04-2016 IPR021034 Domain of unknown function, DUF3672 APECO1_RS21575 f981f88f263c0ee32f3f150ac393e980 224 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 224 1.1E-97 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 APECO1_RS21575 f981f88f263c0ee32f3f150ac393e980 224 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 224 44.059 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 APECO1_RS21575 f981f88f263c0ee32f3f150ac393e980 224 SUPERFAMILY SSF55729 43 218 4.61E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS21575 f981f88f263c0ee32f3f150ac393e980 224 Gene3D G3DSA:3.40.630.30 88 218 4.3E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS05980 efde668c2c349b9e39d8b320613a8082 530 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 26 506 3.8E-215 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APECO1_RS05980 efde668c2c349b9e39d8b320613a8082 530 Pfam PF05136 Phage portal protein, lambda family 29 397 1.8E-98 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APECO1_RS17375 66222afcb6bfa247da299348c6eafcee 288 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 6.2E-6 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APECO1_RS17375 66222afcb6bfa247da299348c6eafcee 288 SUPERFAMILY SSF47616 133 279 1.81E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS17375 66222afcb6bfa247da299348c6eafcee 288 Pfam PF13410 Glutathione S-transferase, C-terminal domain 175 244 2.2E-9 T 22-04-2016 APECO1_RS17375 66222afcb6bfa247da299348c6eafcee 288 Gene3D G3DSA:1.20.1050.10 131 254 1.7E-43 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS17375 66222afcb6bfa247da299348c6eafcee 288 SUPERFAMILY SSF52833 37 130 6.34E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS17375 66222afcb6bfa247da299348c6eafcee 288 PANTHER PTHR11260 18 262 5.1E-182 T 22-04-2016 APECO1_RS17375 66222afcb6bfa247da299348c6eafcee 288 PANTHER PTHR11260:SF258 18 262 5.1E-182 T 22-04-2016 APECO1_RS17375 66222afcb6bfa247da299348c6eafcee 288 Gene3D G3DSA:3.40.30.10 33 130 4.5E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS03880 c96f6e9b97fdd34f513af08852d930d4 320 Gene3D G3DSA:1.20.970.10 7 69 1.4E-17 T 22-04-2016 APECO1_RS03880 c96f6e9b97fdd34f513af08852d930d4 320 SUPERFAMILY SSF52418 75 319 8.79E-49 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APECO1_RS03880 c96f6e9b97fdd34f513af08852d930d4 320 Gene3D G3DSA:3.40.1030.10 80 319 1.7E-41 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APECO1_RS03880 c96f6e9b97fdd34f513af08852d930d4 320 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 69 1.6E-9 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APECO1_RS03880 c96f6e9b97fdd34f513af08852d930d4 320 SUPERFAMILY SSF47648 7 72 1.06E-13 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APECO1_RS02380 c4bc397d91bfaa8a03e648a536fd087f 125 PIRSF PIRSF016789 2 123 5.0E-51 T 22-04-2016 IPR007401 Protein of unknown function DUF454 APECO1_RS02380 c4bc397d91bfaa8a03e648a536fd087f 125 PANTHER PTHR35813 1 125 1.8E-50 T 22-04-2016 APECO1_RS02380 c4bc397d91bfaa8a03e648a536fd087f 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 1.8E-41 T 22-04-2016 IPR007401 Protein of unknown function DUF454 APECO1_RS02380 c4bc397d91bfaa8a03e648a536fd087f 125 PANTHER PTHR35813:SF1 1 125 1.8E-50 T 22-04-2016 APECO1_RS10445 e463060f1d1389b4bb91f341fbe49000 306 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 20 281 2.3E-71 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 APECO1_RS10445 e463060f1d1389b4bb91f341fbe49000 306 SUPERFAMILY SSF103481 196 287 7.19E-11 T 22-04-2016 APECO1_RS10445 e463060f1d1389b4bb91f341fbe49000 306 PANTHER PTHR32322:SF8 1 306 6.9E-162 T 22-04-2016 APECO1_RS10445 e463060f1d1389b4bb91f341fbe49000 306 Pfam PF00892 EamA-like transporter family 150 284 7.4E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS10445 e463060f1d1389b4bb91f341fbe49000 306 Pfam PF00892 EamA-like transporter family 14 140 9.0E-24 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS10445 e463060f1d1389b4bb91f341fbe49000 306 SUPERFAMILY SSF103481 43 144 9.55E-11 T 22-04-2016 APECO1_RS10445 e463060f1d1389b4bb91f341fbe49000 306 PANTHER PTHR32322 1 306 6.9E-162 T 22-04-2016 APECO1_RS02715 503e27fc132bfb98e87d4eee711013d9 118 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 81 115 1.9E-13 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly APECO1_RS02715 503e27fc132bfb98e87d4eee711013d9 118 PANTHER PTHR34413 1 118 5.0E-19 T 22-04-2016 APECO1_RS13410 1e36ca5a52babe843c755b20e12d133e 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 305 69.483 T 22-04-2016 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APECO1_RS13410 1e36ca5a52babe843c755b20e12d133e 306 PANTHER PTHR30606 2 306 4.1E-253 T 22-04-2016 APECO1_RS13410 1e36ca5a52babe843c755b20e12d133e 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 296 2.2E-118 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APECO1_RS13410 1e36ca5a52babe843c755b20e12d133e 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 305 3.6E-143 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APECO1_RS13410 1e36ca5a52babe843c755b20e12d133e 306 PANTHER PTHR30606:SF7 2 306 4.1E-253 T 22-04-2016 APECO1_RS13410 1e36ca5a52babe843c755b20e12d133e 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 305 49.204 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APECO1_RS13410 1e36ca5a52babe843c755b20e12d133e 306 PIRSF PIRSF026649 3 305 3.2E-92 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APECO1_RS04165 956844785054908e749453b58a999e6e 317 Gene3D G3DSA:1.10.3720.10 26 306 4.2E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04165 956844785054908e749453b58a999e6e 317 PANTHER PTHR30193:SF5 4 316 1.5E-167 T 22-04-2016 APECO1_RS04165 956844785054908e749453b58a999e6e 317 SUPERFAMILY SSF161098 27 308 3.79E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04165 956844785054908e749453b58a999e6e 317 PANTHER PTHR30193 4 316 1.5E-167 T 22-04-2016 APECO1_RS04165 956844785054908e749453b58a999e6e 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 313 2.5E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS06635 e95dcf69c366ac7c00165adc12060f86 132 Pfam PF03061 Thioesterase superfamily 26 97 6.9E-18 T 22-04-2016 IPR006683 Thioesterase domain APECO1_RS06635 e95dcf69c366ac7c00165adc12060f86 132 PANTHER PTHR11049:SF5 1 130 4.0E-77 T 22-04-2016 APECO1_RS06635 e95dcf69c366ac7c00165adc12060f86 132 PANTHER PTHR11049 1 130 4.0E-77 T 22-04-2016 APECO1_RS06635 e95dcf69c366ac7c00165adc12060f86 132 Gene3D G3DSA:3.10.129.10 5 130 3.3E-41 T 22-04-2016 IPR029069 HotDog domain APECO1_RS06635 e95dcf69c366ac7c00165adc12060f86 132 SUPERFAMILY SSF54637 7 130 2.9E-36 T 22-04-2016 IPR029069 HotDog domain APECO1_RS04105 64e55c42078d0d56bb520381025f1f4c 402 Gene3D G3DSA:1.20.1250.20 11 186 6.9E-12 T 22-04-2016 APECO1_RS04105 64e55c42078d0d56bb520381025f1f4c 402 Gene3D G3DSA:1.20.1250.20 215 396 2.3E-24 T 22-04-2016 APECO1_RS04105 64e55c42078d0d56bb520381025f1f4c 402 Pfam PF07690 Major Facilitator Superfamily 223 388 3.0E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS04105 64e55c42078d0d56bb520381025f1f4c 402 SUPERFAMILY SSF103473 11 390 4.97E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS04105 64e55c42078d0d56bb520381025f1f4c 402 PANTHER PTHR23514 6 394 1.8E-279 T 22-04-2016 APECO1_RS04105 64e55c42078d0d56bb520381025f1f4c 402 PANTHER PTHR23514:SF12 6 394 1.8E-279 T 22-04-2016 APECO1_RS00725 4775058c449dec722da70b4cecdc9018 283 PANTHER PTHR21299 3 282 2.9E-141 T 22-04-2016 APECO1_RS00725 4775058c449dec722da70b4cecdc9018 283 PANTHER PTHR21299:SF1 3 282 2.9E-141 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APECO1_RS00725 4775058c449dec722da70b4cecdc9018 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.519 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APECO1_RS00725 4775058c449dec722da70b4cecdc9018 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 281 1.9E-130 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APECO1_RS00725 4775058c449dec722da70b4cecdc9018 283 SUPERFAMILY SSF52374 3 281 2.95E-107 T 22-04-2016 APECO1_RS00725 4775058c449dec722da70b4cecdc9018 283 Gene3D G3DSA:3.40.50.620 3 176 3.9E-78 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS00725 4775058c449dec722da70b4cecdc9018 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 5.4E-104 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APECO1_RS00725 4775058c449dec722da70b4cecdc9018 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 68 1.1E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APECO1_RS00725 4775058c449dec722da70b4cecdc9018 283 Gene3D G3DSA:3.30.1300.10 181 282 2.9E-31 T 22-04-2016 APECO1_RS23405 2b23b3fd905d7f0e8bf32cb6cc2af693 235 Pfam PF02653 Branched-chain amino acid transport system / permease component 3 227 6.3E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS23405 2b23b3fd905d7f0e8bf32cb6cc2af693 235 PANTHER PTHR32196 1 235 1.1E-80 T 22-04-2016 APECO1_RS23405 2b23b3fd905d7f0e8bf32cb6cc2af693 235 PANTHER PTHR32196:SF21 1 235 1.1E-80 T 22-04-2016 APECO1_RS08360 0f1c9124ccd94dddf7b6bf66c8897711 119 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 114 5.0E-53 T 22-04-2016 IPR020378 Protein of unknown function DUF4186 APECO1_RS08360 0f1c9124ccd94dddf7b6bf66c8897711 119 Pfam PF13811 Domain of unknown function (DUF4186) 7 112 2.2E-51 T 22-04-2016 IPR020378 Protein of unknown function DUF4186 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 Gene3D G3DSA:3.30.1360.60 7 82 2.6E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 Pfam PF00367 phosphotransferase system, EIIB 12 39 1.1E-10 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 163 447 1.0E-87 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 3.4E-223 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 8.3E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 PANTHER PTHR30175 1 465 1.2E-261 T 22-04-2016 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 Pfam PF02378 Phosphotransferase system, EIIC 112 404 5.9E-32 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 PANTHER PTHR30175:SF4 1 465 1.2E-261 T 22-04-2016 APECO1_RS24630 cc9f48077fc1826bfb9a91def79a9208 472 SUPERFAMILY SSF55604 10 80 3.92E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS04470 b39ac1f471e7be749949253174cbd603 344 PIRSF PIRSF018494 1 344 2.0E-154 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria APECO1_RS04470 b39ac1f471e7be749949253174cbd603 344 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 52 332 1.9E-74 T 22-04-2016 IPR006430 Phage portal protein PBSX family APECO1_RS04470 b39ac1f471e7be749949253174cbd603 344 Pfam PF04860 Phage portal protein 89 322 1.7E-11 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.4E-270 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 Gene3D G3DSA:3.40.50.10490 445 609 3.0E-70 T 22-04-2016 APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 PANTHER PTHR10937:SF0 1 609 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 Gene3D G3DSA:3.40.50.10490 245 444 5.9E-65 T 22-04-2016 APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 Pfam PF13522 Glutamine amidotransferase domain 65 182 6.1E-22 T 22-04-2016 APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.597 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 Gene3D G3DSA:3.60.20.10 2 238 8.5E-81 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 PANTHER PTHR10937 1 609 0.0 T 22-04-2016 APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 SUPERFAMILY SSF56235 2 232 1.03E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 Pfam PF01380 SIS domain 289 418 3.2E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 Pfam PF01380 SIS domain 462 591 1.5E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS21285 cbfbcd3a4ffb1ea1804d7c9daa8d5d74 609 SUPERFAMILY SSF53697 245 609 2.32E-114 T 22-04-2016 APECO1_RS04905 01f69ff97eb2baf3793e4041dd5e9dfe 220 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 213 1.5E-46 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 APECO1_RS04905 01f69ff97eb2baf3793e4041dd5e9dfe 220 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 216 25.771 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 APECO1_RS04905 01f69ff97eb2baf3793e4041dd5e9dfe 220 PANTHER PTHR38108:SF1 1 220 1.2E-81 T 22-04-2016 APECO1_RS04905 01f69ff97eb2baf3793e4041dd5e9dfe 220 PANTHER PTHR38108 1 220 1.2E-81 T 22-04-2016 APECO1_RS20640 252fd291be7ca9643cd0014f9def70e3 157 PANTHER PTHR12029 1 157 6.0E-83 T 22-04-2016 APECO1_RS20640 252fd291be7ca9643cd0014f9def70e3 157 PIRSF PIRSF029256 1 154 2.3E-71 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APECO1_RS20640 252fd291be7ca9643cd0014f9def70e3 157 PANTHER PTHR12029:SF31 1 157 6.0E-83 T 22-04-2016 APECO1_RS20640 252fd291be7ca9643cd0014f9def70e3 157 Gene3D G3DSA:3.40.1280.10 1 153 7.6E-71 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APECO1_RS20640 252fd291be7ca9643cd0014f9def70e3 157 SUPERFAMILY SSF75217 1 152 4.71E-46 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APECO1_RS20640 252fd291be7ca9643cd0014f9def70e3 157 Pfam PF00588 SpoU rRNA Methylase family 2 142 8.9E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APECO1_RS20640 252fd291be7ca9643cd0014f9def70e3 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 1.0E-75 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APECO1_RS20640 252fd291be7ca9643cd0014f9def70e3 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.452 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APECO1_RS24860 606340875424f1de575f761fffd2d561 167 PANTHER PTHR33420:SF6 1 167 2.7E-95 T 22-04-2016 APECO1_RS24860 606340875424f1de575f761fffd2d561 167 SUPERFAMILY SSF49401 27 166 9.44E-25 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS24860 606340875424f1de575f761fffd2d561 167 PANTHER PTHR33420 1 167 2.7E-95 T 22-04-2016 APECO1_RS24860 606340875424f1de575f761fffd2d561 167 Gene3D G3DSA:2.60.40.1090 27 166 4.5E-24 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS20885 18fe2359e4d9b63fe46a5f355c76c298 286 PANTHER PTHR30304 2 283 2.3E-84 T 22-04-2016 APECO1_RS20885 18fe2359e4d9b63fe46a5f355c76c298 286 PIRSF PIRSF001359 1 283 1.9E-89 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS20885 18fe2359e4d9b63fe46a5f355c76c298 286 Gene3D G3DSA:3.20.20.70 1 284 1.5E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS20885 18fe2359e4d9b63fe46a5f355c76c298 286 SUPERFAMILY SSF51569 3 283 2.93E-90 T 22-04-2016 APECO1_RS20885 18fe2359e4d9b63fe46a5f355c76c298 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 282 1.1E-88 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS20885 18fe2359e4d9b63fe46a5f355c76c298 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 9.9E-78 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 PANTHER PTHR12532:SF4 2 235 1.5E-151 T 22-04-2016 APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 30.077 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 Gene3D G3DSA:3.30.1270.10 210 236 5.4E-33 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 Gene3D G3DSA:3.30.1270.10 82 131 5.4E-33 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 Gene3D G3DSA:1.10.10.200 2 77 4.8E-28 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 2.0E-65 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 PANTHER PTHR12532 2 235 1.5E-151 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 Pfam PF01709 Transcriptional regulator 4 235 7.4E-78 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 SUPERFAMILY SSF75625 2 235 2.49E-77 T 22-04-2016 IPR029072 YebC-like APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.778 T 22-04-2016 IPR026562 Probable transcriptional regulatory protein YeeN APECO1_RS10910 eb9e1e97220339695f03767fab7500d1 238 Gene3D G3DSA:3.30.70.980 132 202 4.6E-22 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 APECO1_RS04805 fc4bfcd5717b5bcdf20671a95eeae1db 336 PANTHER PTHR11938 5 332 1.6E-108 T 22-04-2016 APECO1_RS04805 fc4bfcd5717b5bcdf20671a95eeae1db 336 PIRSF PIRSF000164 11 336 2.2E-97 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 APECO1_RS04805 fc4bfcd5717b5bcdf20671a95eeae1db 336 SUPERFAMILY SSF51395 1 334 3.44E-104 T 22-04-2016 APECO1_RS04805 fc4bfcd5717b5bcdf20671a95eeae1db 336 Gene3D G3DSA:3.20.20.70 1 335 1.5E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS04805 fc4bfcd5717b5bcdf20671a95eeae1db 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.162 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS04805 fc4bfcd5717b5bcdf20671a95eeae1db 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 9.9E-169 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS04805 fc4bfcd5717b5bcdf20671a95eeae1db 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 4.7E-93 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APECO1_RS04805 fc4bfcd5717b5bcdf20671a95eeae1db 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APECO1_RS04805 fc4bfcd5717b5bcdf20671a95eeae1db 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APECO1_RS09255 3d58aa5d1f5f80aaea66ee9f26bddb2a 286 Gene3D G3DSA:3.90.1200.10 96 259 3.5E-13 T 22-04-2016 APECO1_RS09255 3d58aa5d1f5f80aaea66ee9f26bddb2a 286 PANTHER PTHR12149 1 285 6.0E-120 T 22-04-2016 APECO1_RS09255 3d58aa5d1f5f80aaea66ee9f26bddb2a 286 Pfam PF03881 Fructosamine kinase 1 285 4.2E-114 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase APECO1_RS09255 3d58aa5d1f5f80aaea66ee9f26bddb2a 286 Gene3D G3DSA:3.30.200.20 32 90 7.8E-5 T 22-04-2016 APECO1_RS09255 3d58aa5d1f5f80aaea66ee9f26bddb2a 286 PIRSF PIRSF006221 1 286 5.7E-95 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase APECO1_RS09255 3d58aa5d1f5f80aaea66ee9f26bddb2a 286 SUPERFAMILY SSF56112 4 280 1.24E-41 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS09255 3d58aa5d1f5f80aaea66ee9f26bddb2a 286 PANTHER PTHR12149:SF8 1 285 6.0E-120 T 22-04-2016 APECO1_RS25005 1ae9ce766efc1a2dd995b74444dfe2d2 57 SUPERFAMILY SSF56399 1 56 4.32E-13 T 22-04-2016 APECO1_RS25005 1ae9ce766efc1a2dd995b74444dfe2d2 57 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 1 48 1.8E-7 T 22-04-2016 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 APECO1_RS25005 1ae9ce766efc1a2dd995b74444dfe2d2 57 PANTHER PTHR12684 1 56 1.8E-12 T 22-04-2016 APECO1_RS12435 32e352934b6def34928e3aec853004dc 207 Gene3D G3DSA:3.90.1720.10 129 177 1.4E-6 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS12435 32e352934b6def34928e3aec853004dc 207 Gene3D G3DSA:3.90.1720.10 52 87 1.4E-6 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS12435 32e352934b6def34928e3aec853004dc 207 Pfam PF06672 Protein of unknown function (DUF1175) 20 205 6.0E-77 T 22-04-2016 IPR009558 Protein of unknown function DUF1175 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PANTHER PTHR12428:SF14 165 547 1.5E-154 T 22-04-2016 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 5.3E-30 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 5.3E-30 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 5.3E-30 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 499 522 1.3E-109 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 462 484 1.3E-109 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.3E-109 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.3E-109 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 251 266 1.3E-109 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 324 344 1.3E-109 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.3E-109 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.3E-109 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PRINTS PR00701 60kDa inner membrane protein signature 415 438 1.3E-109 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 1.0E-117 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 4.8E-69 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 PANTHER PTHR12428 165 547 1.5E-154 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 Pfam PF14849 YidC periplasmic domain 61 343 8.1E-90 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 Pfam PF02096 60Kd inner membrane protein 354 533 1.3E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APECO1_RS21170 a0f85dc8f634ee4a9abcca6dfa3b6c74 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 27.008 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 Gene3D G3DSA:1.10.730.10 582 678 1.7E-4 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 9.0E-216 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 27.282 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.1E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.1E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.1E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.1E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.1E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 Pfam PF05746 DALR anticodon binding domain 582 679 2.9E-8 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 PANTHER PTHR30075 1 689 0.0 T 22-04-2016 APECO1_RS20405 be24b7cafc85c334fab85dc7fcafe1fc 689 SUPERFAMILY SSF109604 339 511 5.34E-17 T 22-04-2016 APECO1_RS11315 fa4fb0ade905ed7366a728b95a4fc64b 182 PANTHER PTHR21047 1 182 1.2E-80 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APECO1_RS11315 fa4fb0ade905ed7366a728b95a4fc64b 182 SUPERFAMILY SSF51182 1 179 1.19E-82 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS11315 fa4fb0ade905ed7366a728b95a4fc64b 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 169 5.0E-88 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APECO1_RS11315 fa4fb0ade905ed7366a728b95a4fc64b 182 Gene3D G3DSA:2.60.120.10 1 179 1.9E-89 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS11315 fa4fb0ade905ed7366a728b95a4fc64b 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 4.2E-88 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APECO1_RS11315 fa4fb0ade905ed7366a728b95a4fc64b 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 176 8.5E-80 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APECO1_RS12615 5afc79e97493d519c0f5d2e334e552ce 252 SUPERFAMILY SSF53474 9 250 1.63E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS12615 5afc79e97493d519c0f5d2e334e552ce 252 PANTHER PTHR10992:SF698 8 252 3.3E-72 T 22-04-2016 APECO1_RS12615 5afc79e97493d519c0f5d2e334e552ce 252 PANTHER PTHR10992 8 252 3.3E-72 T 22-04-2016 APECO1_RS12615 5afc79e97493d519c0f5d2e334e552ce 252 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 251 34.145 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12615 5afc79e97493d519c0f5d2e334e552ce 252 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 250 1.1E-81 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APECO1_RS12615 5afc79e97493d519c0f5d2e334e552ce 252 Pfam PF12697 Alpha/beta hydrolase family 17 244 8.2E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS12615 5afc79e97493d519c0f5d2e334e552ce 252 Gene3D G3DSA:3.40.50.1820 8 251 1.1E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07300 bf09f06a56d4697524696b6f7ef40a30 301 SUPERFAMILY SSF56935 247 301 2.56E-6 T 22-04-2016 APECO1_RS07300 bf09f06a56d4697524696b6f7ef40a30 301 SUPERFAMILY SSF56935 47 201 2.56E-6 T 22-04-2016 APECO1_RS07300 bf09f06a56d4697524696b6f7ef40a30 301 Gene3D G3DSA:2.40.160.40 22 301 2.6E-129 T 22-04-2016 APECO1_RS07300 bf09f06a56d4697524696b6f7ef40a30 301 Pfam PF09381 Outer membrane protein G (OmpG) 1 301 1.1E-216 T 22-04-2016 IPR018981 Outer membrane protein G APECO1_RS04020 55cb17e0c33b118c82c3303ae3fc559f 321 SUPERFAMILY SSF56235 4 309 1.13E-99 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS04020 55cb17e0c33b118c82c3303ae3fc559f 321 PANTHER PTHR10188:SF24 6 313 4.7E-136 T 22-04-2016 APECO1_RS04020 55cb17e0c33b118c82c3303ae3fc559f 321 PANTHER PTHR10188 6 313 4.7E-136 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 APECO1_RS04020 55cb17e0c33b118c82c3303ae3fc559f 321 Pfam PF01112 Asparaginase 5 311 6.6E-120 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 APECO1_RS15580 7fc5717d6c5a806f9f1115b008f4a3cb 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 6.1E-34 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS15580 7fc5717d6c5a806f9f1115b008f4a3cb 258 PANTHER PTHR12110 1 258 2.4E-176 T 22-04-2016 APECO1_RS15580 7fc5717d6c5a806f9f1115b008f4a3cb 258 SUPERFAMILY SSF51658 1 256 3.54E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS15580 7fc5717d6c5a806f9f1115b008f4a3cb 258 PANTHER PTHR12110:SF12 1 258 2.4E-176 T 22-04-2016 APECO1_RS15580 7fc5717d6c5a806f9f1115b008f4a3cb 258 Gene3D G3DSA:3.20.20.150 1 257 9.0E-89 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS15580 7fc5717d6c5a806f9f1115b008f4a3cb 258 PIRSF PIRSF006241 1 258 2.8E-87 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 APECO1_RS04045 377b631d57889227ea6afa31adbc530a 782 Pfam PF00563 EAL domain 532 767 1.7E-64 T 22-04-2016 IPR001633 EAL domain APECO1_RS04045 377b631d57889227ea6afa31adbc530a 782 PANTHER PTHR33121:SF8 184 770 2.9E-191 T 22-04-2016 APECO1_RS04045 377b631d57889227ea6afa31adbc530a 782 PANTHER PTHR33121 184 770 2.9E-191 T 22-04-2016 APECO1_RS04045 377b631d57889227ea6afa31adbc530a 782 Gene3D G3DSA:3.20.20.450 530 773 9.4E-70 T 22-04-2016 IPR001633 EAL domain APECO1_RS04045 377b631d57889227ea6afa31adbc530a 782 SUPERFAMILY SSF141868 532 773 2.22E-68 T 22-04-2016 IPR001633 EAL domain APECO1_RS04045 377b631d57889227ea6afa31adbc530a 782 SMART SM00052 526 772 9.9E-107 T 22-04-2016 IPR001633 EAL domain APECO1_RS04045 377b631d57889227ea6afa31adbc530a 782 Pfam PF17153 Periplasmic sensor domain, extracellular 35 150 4.8E-56 T 22-04-2016 IPR033418 Periplasmic sensor domain, extracellular APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 Gene3D G3DSA:3.40.309.10 898 1090 3.8E-45 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 910 921 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 Gene3D G3DSA:1.10.2060.10 142 260 3.5E-55 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 PANTHER PTHR11699:SF18 632 1146 1.2E-182 T 22-04-2016 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 148 259 3.1E-46 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 882 889 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 SUPERFAMILY SSF51730 262 618 1.14E-123 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 SUPERFAMILY SSF53720 656 1110 1.44E-125 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 SUPERFAMILY SSF81935 88 261 5.1E-67 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 PANTHER PTHR11699 632 1146 1.2E-182 T 22-04-2016 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 Gene3D G3DSA:3.40.605.10 654 897 1.5E-67 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 SUPERFAMILY SSF47598 3 45 3.11E-10 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 Pfam PF00171 Aldehyde dehydrogenase family 659 1105 1.8E-113 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1112 5.1E-263 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 PIRSF PIRSF000197 74 1320 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 Gene3D G3DSA:3.20.20.220 261 616 4.5E-122 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 Gene3D G3DSA:1.20.5.550 87 138 3.9E-26 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APECO1_RS05130 9d8b7d695daf592600b32f6f5175db9e 1320 Pfam PF01619 Proline dehydrogenase 270 569 7.0E-99 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 APECO1_RS15210 88dafdd2f1e6b9926ee59fd6763d3056 109 PANTHER PTHR35893:SF3 5 108 4.3E-53 T 22-04-2016 APECO1_RS15210 88dafdd2f1e6b9926ee59fd6763d3056 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 107 6.4E-26 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB APECO1_RS15210 88dafdd2f1e6b9926ee59fd6763d3056 109 PANTHER PTHR35893 5 108 4.3E-53 T 22-04-2016 APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 SUPERFAMILY SSF48452 27 283 1.57E-78 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 PIRSF PIRSF004654 1 292 1.3E-122 T 22-04-2016 IPR023605 Lipoprotein NlpI APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.022 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.2E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 PANTHER PTHR23083 58 290 3.9E-28 T 22-04-2016 APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 PANTHER PTHR23083 31 38 3.9E-28 T 22-04-2016 APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 SMART SM00028 62 95 0.0033 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 SMART SM00028 96 129 2.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 SMART SM00028 234 267 17.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS18265 2ce92cf2f06fc5a6d101faab7303c360 294 Gene3D G3DSA:1.25.40.10 49 267 3.3E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS25055 6ad86ceb58afda06e838c7c924aef482 455 PANTHER PTHR30408:SF7 1 436 2.2E-82 T 22-04-2016 APECO1_RS25055 6ad86ceb58afda06e838c7c924aef482 455 SUPERFAMILY SSF116734 217 422 1.44E-38 T 22-04-2016 APECO1_RS25055 6ad86ceb58afda06e838c7c924aef482 455 SUPERFAMILY SSF116734 4 212 4.91E-39 T 22-04-2016 APECO1_RS25055 6ad86ceb58afda06e838c7c924aef482 455 Pfam PF01420 Type I restriction modification DNA specificity domain 217 394 7.3E-15 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APECO1_RS25055 6ad86ceb58afda06e838c7c924aef482 455 Pfam PF01420 Type I restriction modification DNA specificity domain 7 188 8.4E-25 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APECO1_RS25055 6ad86ceb58afda06e838c7c924aef482 455 PANTHER PTHR30408 1 436 2.2E-82 T 22-04-2016 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 PANTHER PTHR21600:SF2 1 285 4.9E-106 T 22-04-2016 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 3.4E-64 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 Gene3D G3DSA:3.10.290.10 3 62 1.1E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 SUPERFAMILY SSF55174 5 98 1.25E-13 T 22-04-2016 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 Pfam PF00849 RNA pseudouridylate synthase 69 199 1.6E-15 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 Pfam PF01479 S4 domain 4 43 1.1E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 SUPERFAMILY SSF55120 69 234 9.87E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 PANTHER PTHR21600 1 285 4.9E-106 T 22-04-2016 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 SMART SM00363 3 74 5.5E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS07015 99e647810f32d7c9cd1cee8b20cf6e80 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APECO1_RS13190 589c379d7c1520e5f0bea6a38ffbece7 240 Pfam PF03374 Phage antirepressor protein KilAC domain 126 228 4.9E-30 T 22-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 APECO1_RS13190 589c379d7c1520e5f0bea6a38ffbece7 240 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 12 99 8.4E-15 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family APECO1_RS13190 589c379d7c1520e5f0bea6a38ffbece7 240 Gene3D G3DSA:1.10.10.10 10 44 6.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 Gene3D G3DSA:1.10.8.60 187 258 7.3E-33 T 22-04-2016 APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 Gene3D G3DSA:3.40.50.300 23 178 2.9E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 184.752 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 SUPERFAMILY SSF52540 23 255 1.06E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 1.0E-40 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 3.8E-147 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 PANTHER PTHR13779 1 336 3.1E-190 T 22-04-2016 APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 PANTHER PTHR13779:SF25 1 336 3.1E-190 T 22-04-2016 APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 238 1.9E-115 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 4.3E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 Gene3D G3DSA:1.10.10.10 260 330 1.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 SMART SM00382 54 181 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS09965 b9e5f42886aa37d5e491b1818f86e0e6 336 SUPERFAMILY SSF46785 260 333 3.59E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS06840 4dd706457991cdbb667bd153aa8540ac 530 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 26 506 1.1E-210 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APECO1_RS06840 4dd706457991cdbb667bd153aa8540ac 530 Pfam PF05136 Phage portal protein, lambda family 29 397 9.7E-99 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APECO1_RS21570 b7d76c77f5a577c36c796f4a525396a0 293 Pfam PF00483 Nucleotidyl transferase 2 238 1.5E-72 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APECO1_RS21570 b7d76c77f5a577c36c796f4a525396a0 293 PANTHER PTHR22572:SF105 2 268 1.5E-166 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APECO1_RS21570 b7d76c77f5a577c36c796f4a525396a0 293 Gene3D G3DSA:3.90.550.10 1 264 1.3E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS21570 b7d76c77f5a577c36c796f4a525396a0 293 SUPERFAMILY SSF53448 1 286 4.28E-92 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS21570 b7d76c77f5a577c36c796f4a525396a0 293 PANTHER PTHR22572 2 268 1.5E-166 T 22-04-2016 APECO1_RS21570 b7d76c77f5a577c36c796f4a525396a0 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.5E-161 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APECO1_RS19690 3bcbf3a016e9cfb5ef3782a9826373c1 231 PIRSF PIRSF006232 1 230 1.0E-57 T 22-04-2016 IPR012093 Pirin APECO1_RS19690 3bcbf3a016e9cfb5ef3782a9826373c1 231 PANTHER PTHR13903 1 231 3.5E-130 T 22-04-2016 IPR012093 Pirin APECO1_RS19690 3bcbf3a016e9cfb5ef3782a9826373c1 231 PANTHER PTHR13903:SF7 1 231 3.5E-130 T 22-04-2016 APECO1_RS19690 3bcbf3a016e9cfb5ef3782a9826373c1 231 SUPERFAMILY SSF51182 1 231 2.27E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS19690 3bcbf3a016e9cfb5ef3782a9826373c1 231 Gene3D G3DSA:2.60.120.10 4 230 2.3E-72 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS19690 3bcbf3a016e9cfb5ef3782a9826373c1 231 Pfam PF02678 Pirin 7 119 9.8E-38 T 22-04-2016 IPR003829 Pirin, N-terminal domain APECO1_RS10105 1201297b0ff5dd5d73df937862ef0f42 308 PANTHER PTHR30329 1 288 3.7E-151 T 22-04-2016 APECO1_RS10105 1201297b0ff5dd5d73df937862ef0f42 308 PANTHER PTHR30329:SF2 1 288 3.7E-151 T 22-04-2016 APECO1_RS10105 1201297b0ff5dd5d73df937862ef0f42 308 Gene3D G3DSA:3.30.1330.60 151 264 2.7E-15 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS10105 1201297b0ff5dd5d73df937862ef0f42 308 SUPERFAMILY SSF103088 156 264 4.45E-18 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS10105 1201297b0ff5dd5d73df937862ef0f42 308 Pfam PF00691 OmpA family 160 257 6.4E-12 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS10105 1201297b0ff5dd5d73df937862ef0f42 308 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 66 1.4E-19 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain APECO1_RS11685 497e89bdf54dd550d004a7eda0e1f4af 99 SMART SM00530 8 63 2.0E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS11685 497e89bdf54dd550d004a7eda0e1f4af 99 Pfam PF01381 Helix-turn-helix 12 54 1.1E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS11685 497e89bdf54dd550d004a7eda0e1f4af 99 SUPERFAMILY SSF47413 3 67 6.17E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS11685 497e89bdf54dd550d004a7eda0e1f4af 99 Gene3D G3DSA:1.10.260.40 7 71 3.6E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 TIGRFAM TIGR00746 arcC: carbamate kinase 2 296 1.7E-127 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 Pfam PF00696 Amino acid kinase family 2 277 1.1E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 Gene3D G3DSA:3.40.1160.10 1 295 1.4E-91 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 5.4E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PRINTS PR01469 Bacterial carbamate kinase signature 72 90 5.4E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 5.4E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PRINTS PR01469 Bacterial carbamate kinase signature 252 267 5.4E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PRINTS PR01469 Bacterial carbamate kinase signature 201 216 5.4E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 5.4E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 5.4E-59 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 SUPERFAMILY SSF53633 1 295 2.09E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PIRSF PIRSF000723 1 297 4.5E-111 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PANTHER PTHR30409:SF1 1 297 8.3E-143 T 22-04-2016 APECO1_RS02645 29cdb77daa836a1cd536967e69546e18 297 PANTHER PTHR30409 1 297 8.3E-143 T 22-04-2016 APECO1_RS09635 5868acb458699b81f4a39bf450f42b66 55 PANTHER PTHR30537:SF18 1 50 1.8E-24 T 22-04-2016 APECO1_RS09635 5868acb458699b81f4a39bf450f42b66 55 PANTHER PTHR30537 1 50 1.8E-24 T 22-04-2016 APECO1_RS03910 385697072c9438773ae1ce10a54ed398 86 PANTHER PTHR34156 2 86 3.5E-66 T 22-04-2016 APECO1_RS03910 385697072c9438773ae1ce10a54ed398 86 PANTHER PTHR34156:SF7 2 86 3.5E-66 T 22-04-2016 APECO1_RS03910 385697072c9438773ae1ce10a54ed398 86 SUPERFAMILY SSF159871 3 86 3.27E-23 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS03910 385697072c9438773ae1ce10a54ed398 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 8.3E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS03910 385697072c9438773ae1ce10a54ed398 86 Gene3D G3DSA:3.30.1660.10 19 86 3.3E-28 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS22920 2ad1e07b049baa236cacec426fe168ce 229 Gene3D G3DSA:3.40.50.880 1 227 4.5E-77 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS22920 2ad1e07b049baa236cacec426fe168ce 229 SUPERFAMILY SSF52317 1 220 9.16E-43 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS22920 2ad1e07b049baa236cacec426fe168ce 229 Pfam PF03575 Peptidase family S51 3 205 3.8E-62 T 22-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 APECO1_RS22920 2ad1e07b049baa236cacec426fe168ce 229 PANTHER PTHR20842 1 229 1.2E-91 T 22-04-2016 APECO1_RS22920 2ad1e07b049baa236cacec426fe168ce 229 Hamap MF_00510 Peptidase E [pepE]. 1 215 48.775 T 22-04-2016 IPR023172 Peptidase S51, dipeptidase E GO:0016805 APECO1_RS01130 0fc649f53763eab390ae9ba733a14b37 246 SUPERFAMILY SSF53098 10 187 1.34E-52 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS01130 0fc649f53763eab390ae9ba733a14b37 246 PANTHER PTHR30231:SF0 1 245 4.4E-163 T 22-04-2016 APECO1_RS01130 0fc649f53763eab390ae9ba733a14b37 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 10 245 6.3E-96 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS01130 0fc649f53763eab390ae9ba733a14b37 246 Gene3D G3DSA:3.30.420.10 9 187 7.8E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS01130 0fc649f53763eab390ae9ba733a14b37 246 SMART SM00479 10 187 1.9E-51 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS01130 0fc649f53763eab390ae9ba733a14b37 246 PANTHER PTHR30231 1 245 4.4E-163 T 22-04-2016 APECO1_RS01130 0fc649f53763eab390ae9ba733a14b37 246 Pfam PF00929 Exonuclease 12 178 4.0E-42 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APECO1_RS01130 0fc649f53763eab390ae9ba733a14b37 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 9 228 7.1E-100 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS22040 e1e05f53594f0d752a9f0e2d9c311862 194 PANTHER PTHR19136:SF81 2 194 2.3E-57 T 22-04-2016 APECO1_RS22040 e1e05f53594f0d752a9f0e2d9c311862 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 188 8.1E-69 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 APECO1_RS22040 e1e05f53594f0d752a9f0e2d9c311862 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.996 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 APECO1_RS22040 e1e05f53594f0d752a9f0e2d9c311862 194 PANTHER PTHR19136 2 194 2.3E-57 T 22-04-2016 APECO1_RS22040 e1e05f53594f0d752a9f0e2d9c311862 194 Gene3D G3DSA:3.90.550.10 4 192 8.5E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS22040 e1e05f53594f0d752a9f0e2d9c311862 194 SUPERFAMILY SSF53448 6 187 2.7E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS22040 e1e05f53594f0d752a9f0e2d9c311862 194 Pfam PF12804 MobA-like NTP transferase domain 9 160 9.4E-35 T 22-04-2016 IPR025877 MobA-like NTP transferase APECO1_RS10380 06fc43f4d8fe0d35237de79ebe9ef69b 154 PANTHER PTHR35091:SF1 1 154 1.9E-66 T 22-04-2016 APECO1_RS10380 06fc43f4d8fe0d35237de79ebe9ef69b 154 PANTHER PTHR35091 1 154 1.9E-66 T 22-04-2016 APECO1_RS10380 06fc43f4d8fe0d35237de79ebe9ef69b 154 Pfam PF03748 Flagellar basal body-associated protein FliL 56 152 6.5E-20 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 APECO1_RS25290 b6d3bbedaaef7eb15a2f8df07810a47e 162 ProDom PD096295 YFDN SB43 ORF40 1 162 1.0E-88 T 22-04-2016 IPR020344 Bacteriophage SfV, Orf40 APECO1_RS25290 b6d3bbedaaef7eb15a2f8df07810a47e 162 Pfam PF06069 PerC transcriptional activator 98 151 1.3E-9 T 22-04-2016 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 APECO1_RS25290 b6d3bbedaaef7eb15a2f8df07810a47e 162 SUPERFAMILY SSF46785 14 103 4.63E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04980 ba7d0fc5dcca55c41f67819b96b0bdd5 514 PANTHER PTHR30365:SF7 376 514 0.0 T 22-04-2016 APECO1_RS04980 ba7d0fc5dcca55c41f67819b96b0bdd5 514 PANTHER PTHR30365:SF7 1 310 0.0 T 22-04-2016 APECO1_RS04980 ba7d0fc5dcca55c41f67819b96b0bdd5 514 PANTHER PTHR30365 376 514 0.0 T 22-04-2016 APECO1_RS04980 ba7d0fc5dcca55c41f67819b96b0bdd5 514 PANTHER PTHR30365 1 310 0.0 T 22-04-2016 APECO1_RS04980 ba7d0fc5dcca55c41f67819b96b0bdd5 514 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 2.8E-177 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APECO1_RS04655 b04fa2c9b788a2549eab679d23369b73 254 PANTHER PTHR22726:SF8 1 254 3.5E-189 T 22-04-2016 APECO1_RS04655 b04fa2c9b788a2549eab679d23369b73 254 Pfam PF01435 Peptidase family M48 77 249 7.9E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APECO1_RS04655 b04fa2c9b788a2549eab679d23369b73 254 PANTHER PTHR22726 1 254 3.5E-189 T 22-04-2016 APECO1_RS04655 b04fa2c9b788a2549eab679d23369b73 254 Gene3D G3DSA:3.30.2010.10 70 148 1.6E-21 T 22-04-2016 APECO1_RS10170 d2e0b81465d17ba9268c4babb10fda67 107 Pfam PF13992 YecR-like lipoprotein 27 98 2.0E-27 T 22-04-2016 IPR025731 YecR-like lipoprotein APECO1_RS16995 f1c6db15d2a6fec89da0fa0633606bd3 108 PANTHER PTHR33215:SF3 1 107 8.2E-21 T 22-04-2016 APECO1_RS16995 f1c6db15d2a6fec89da0fa0633606bd3 108 SUPERFAMILY SSF46689 3 99 5.82E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS16995 f1c6db15d2a6fec89da0fa0633606bd3 108 PANTHER PTHR33215 1 107 8.2E-21 T 22-04-2016 APECO1_RS16995 f1c6db15d2a6fec89da0fa0633606bd3 108 Gene3D G3DSA:1.10.10.60 8 96 3.0E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS16995 f1c6db15d2a6fec89da0fa0633606bd3 108 Pfam PF01527 Transposase 1 87 1.1E-10 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APECO1_RS11215 6ca00c54ed8f1b5d8329051e1839dbf9 274 PANTHER PTHR10366 3 267 7.6E-77 T 22-04-2016 APECO1_RS11215 6ca00c54ed8f1b5d8329051e1839dbf9 274 Gene3D G3DSA:3.40.50.720 100 234 2.7E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11215 6ca00c54ed8f1b5d8329051e1839dbf9 274 PANTHER PTHR10366:SF289 3 267 7.6E-77 T 22-04-2016 APECO1_RS11215 6ca00c54ed8f1b5d8329051e1839dbf9 274 Gene3D G3DSA:3.40.50.720 2 99 1.1E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11215 6ca00c54ed8f1b5d8329051e1839dbf9 274 SUPERFAMILY SSF51735 2 266 1.54E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11215 6ca00c54ed8f1b5d8329051e1839dbf9 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 6.1E-10 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APECO1_RS16105 0937b52e5ac7c4dd33edcedfe2e74df8 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 384 1.5E-109 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 APECO1_RS16105 0937b52e5ac7c4dd33edcedfe2e74df8 391 Gene3D G3DSA:3.40.640.10 43 251 5.7E-50 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS16105 0937b52e5ac7c4dd33edcedfe2e74df8 391 PANTHER PTHR11751:SF21 3 386 1.9E-92 T 22-04-2016 APECO1_RS16105 0937b52e5ac7c4dd33edcedfe2e74df8 391 PANTHER PTHR11751 3 386 1.9E-92 T 22-04-2016 APECO1_RS16105 0937b52e5ac7c4dd33edcedfe2e74df8 391 SUPERFAMILY SSF53383 3 386 2.53E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS16105 0937b52e5ac7c4dd33edcedfe2e74df8 391 Gene3D G3DSA:3.90.1150.10 252 385 4.2E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS16105 0937b52e5ac7c4dd33edcedfe2e74df8 391 Pfam PF00155 Aminotransferase class I and II 29 372 1.2E-42 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS12360 a9540d5009929883b6829a695cbc7222 351 PANTHER PTHR30040:SF3 1 350 2.8E-180 T 22-04-2016 APECO1_RS12360 a9540d5009929883b6829a695cbc7222 351 SUPERFAMILY SSF143631 34 346 3.92E-94 T 22-04-2016 IPR003374 ApbE-like domain APECO1_RS12360 a9540d5009929883b6829a695cbc7222 351 PIRSF PIRSF006268 2 347 1.6E-89 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APECO1_RS12360 a9540d5009929883b6829a695cbc7222 351 Pfam PF02424 ApbE family 42 325 4.5E-79 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APECO1_RS12360 a9540d5009929883b6829a695cbc7222 351 PANTHER PTHR30040 1 350 2.8E-180 T 22-04-2016 APECO1_RS12780 53125c9d93bd98e258222dccef54316e 180 Pfam PF00293 NUDIX domain 36 154 3.1E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS12780 53125c9d93bd98e258222dccef54316e 180 PIRSF PIRSF017340 1 171 6.7E-76 T 22-04-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 APECO1_RS12780 53125c9d93bd98e258222dccef54316e 180 PANTHER PTHR22769:SF25 1 178 5.9E-129 T 22-04-2016 APECO1_RS12780 53125c9d93bd98e258222dccef54316e 180 PANTHER PTHR22769 1 178 5.9E-129 T 22-04-2016 APECO1_RS12780 53125c9d93bd98e258222dccef54316e 180 SUPERFAMILY SSF55811 9 166 3.93E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS12780 53125c9d93bd98e258222dccef54316e 180 Gene3D G3DSA:3.90.79.10 2 177 2.3E-63 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 Gene3D G3DSA:1.10.10.10 137 227 9.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 PANTHER PTHR26402 4 229 8.4E-166 T 22-04-2016 APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 SMART SM00862 150 226 4.5E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 PANTHER PTHR26402:SF573 4 229 8.4E-166 T 22-04-2016 APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 Gene3D G3DSA:3.40.50.2300 2 136 2.7E-36 T 22-04-2016 APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 Pfam PF00072 Response regulator receiver domain 6 115 3.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 SUPERFAMILY SSF52172 3 130 1.99E-37 T 22-04-2016 IPR011006 CheY-like superfamily APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 SUPERFAMILY SSF46894 125 226 1.13E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 1.5E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APECO1_RS25645 0d20ecc2eb5e78555b9f9d3ebe680646 229 SMART SM00448 4 115 5.6E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 TIGRFAM TIGR04005 wcaL: colanic acid biosynthesis glycosyltransferase WcaL 1 406 1.2E-265 T 22-04-2016 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL KEGG: 00540+2.4.-.-|UniPathway: UPA00936 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 Gene3D G3DSA:3.40.50.2000 201 384 8.5E-24 T 22-04-2016 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 Pfam PF00534 Glycosyl transferases group 1 217 375 4.1E-38 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 PANTHER PTHR12526 117 406 6.2E-85 T 22-04-2016 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 PANTHER PTHR12526 1 40 6.2E-85 T 22-04-2016 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 PANTHER PTHR12526 57 100 6.2E-85 T 22-04-2016 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 Pfam PF13439 Glycosyltransferase Family 4 15 210 9.1E-8 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 PANTHER PTHR12526:SF374 117 406 6.2E-85 T 22-04-2016 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 PANTHER PTHR12526:SF374 1 40 6.2E-85 T 22-04-2016 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 PANTHER PTHR12526:SF374 57 100 6.2E-85 T 22-04-2016 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 SUPERFAMILY SSF53756 117 404 1.57E-58 T 22-04-2016 APECO1_RS11345 ad3f048e3b078cbeafbcd6d36dd918b5 406 SUPERFAMILY SSF53756 14 86 1.57E-58 T 22-04-2016 APECO1_RS00345 d0e7b2514dd616bfb6f3e462be23bc73 566 Hamap MF_00520 Ribulokinase [araB]. 1 558 60.055 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 APECO1_RS00345 d0e7b2514dd616bfb6f3e462be23bc73 566 SUPERFAMILY SSF53067 5 284 2.85E-22 T 22-04-2016 APECO1_RS00345 d0e7b2514dd616bfb6f3e462be23bc73 566 Gene3D G3DSA:3.30.420.40 285 545 8.4E-43 T 22-04-2016 APECO1_RS00345 d0e7b2514dd616bfb6f3e462be23bc73 566 PANTHER PTHR10196 1 558 0.0 T 22-04-2016 APECO1_RS00345 d0e7b2514dd616bfb6f3e462be23bc73 566 SUPERFAMILY SSF53067 285 545 4.32E-42 T 22-04-2016 APECO1_RS00345 d0e7b2514dd616bfb6f3e462be23bc73 566 Gene3D G3DSA:3.30.420.40 3 282 9.2E-29 T 22-04-2016 APECO1_RS00345 d0e7b2514dd616bfb6f3e462be23bc73 566 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 550 1.7E-282 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 APECO1_RS00345 d0e7b2514dd616bfb6f3e462be23bc73 566 PANTHER PTHR10196:SF62 1 558 0.0 T 22-04-2016 APECO1_RS00345 d0e7b2514dd616bfb6f3e462be23bc73 566 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 501 1.2E-36 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APECO1_RS23315 408c5409753fa439c6058fbba10c4f8e 127 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 3 127 8.6E-64 T 22-04-2016 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF APECO1_RS23315 408c5409753fa439c6058fbba10c4f8e 127 Pfam PF03918 Cytochrome C biogenesis protein 8 126 2.6E-45 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family APECO1_RS23315 408c5409753fa439c6058fbba10c4f8e 127 PANTHER PTHR30009:SF6 4 127 2.0E-73 T 22-04-2016 APECO1_RS23315 408c5409753fa439c6058fbba10c4f8e 127 PANTHER PTHR30009 4 127 2.0E-73 T 22-04-2016 APECO1_RS03950 8091372ffb1e79ebbdf2a52a58fbf354 295 Pfam PF00892 EamA-like transporter family 148 277 6.0E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS03950 8091372ffb1e79ebbdf2a52a58fbf354 295 PANTHER PTHR22911 5 295 2.0E-125 T 22-04-2016 APECO1_RS03950 8091372ffb1e79ebbdf2a52a58fbf354 295 PANTHER PTHR22911:SF37 5 295 2.0E-125 T 22-04-2016 APECO1_RS03950 8091372ffb1e79ebbdf2a52a58fbf354 295 SUPERFAMILY SSF103481 185 278 1.63E-10 T 22-04-2016 APECO1_RS03950 8091372ffb1e79ebbdf2a52a58fbf354 295 SUPERFAMILY SSF103481 46 136 1.44E-6 T 22-04-2016 APECO1_RS16520 98822156c91c8e151fc394de8e11cfce 219 PANTHER PTHR11934 1 219 1.9E-150 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS16520 98822156c91c8e151fc394de8e11cfce 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.72 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS16520 98822156c91c8e151fc394de8e11cfce 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.5E-72 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS16520 98822156c91c8e151fc394de8e11cfce 219 PANTHER PTHR11934:SF11 1 219 1.9E-150 T 22-04-2016 APECO1_RS16520 98822156c91c8e151fc394de8e11cfce 219 Gene3D G3DSA:3.30.70.260 137 196 1.3E-30 T 22-04-2016 APECO1_RS16520 98822156c91c8e151fc394de8e11cfce 219 SUPERFAMILY SSF75445 127 198 2.75E-24 T 22-04-2016 APECO1_RS16520 98822156c91c8e151fc394de8e11cfce 219 SUPERFAMILY SSF100950 2 146 1.86E-46 T 22-04-2016 APECO1_RS16520 98822156c91c8e151fc394de8e11cfce 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 8.9E-59 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APECO1_RS16520 98822156c91c8e151fc394de8e11cfce 219 Gene3D G3DSA:3.40.50.1360 1 136 1.7E-58 T 22-04-2016 APECO1_RS01625 c79973fe8ba3581e27b1a562753e5df2 231 SUPERFAMILY SSF100950 41 229 1.8E-37 T 22-04-2016 APECO1_RS01625 c79973fe8ba3581e27b1a562753e5df2 231 PANTHER PTHR32479:SF11 1 231 6.7E-70 T 22-04-2016 APECO1_RS01625 c79973fe8ba3581e27b1a562753e5df2 231 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 65 228 1.4E-29 T 22-04-2016 IPR003741 LUD domain APECO1_RS01625 c79973fe8ba3581e27b1a562753e5df2 231 PANTHER PTHR32479 1 231 6.7E-70 T 22-04-2016 APECO1_RS01625 c79973fe8ba3581e27b1a562753e5df2 231 Gene3D G3DSA:3.40.50.10420 42 228 7.5E-46 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APECO1_RS24080 724056da5dcde608dc50e9bb32aa291c 112 SUPERFAMILY SSF54913 10 111 3.11E-35 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APECO1_RS24080 724056da5dcde608dc50e9bb32aa291c 112 Gene3D G3DSA:3.30.70.830 3 111 7.1E-41 T 22-04-2016 APECO1_RS24080 724056da5dcde608dc50e9bb32aa291c 112 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 1 112 42.086 T 22-04-2016 IPR023700 Divalent cation tolerance protein CutA, bacteria GO:0005507|GO:0005737 APECO1_RS24080 724056da5dcde608dc50e9bb32aa291c 112 Pfam PF03091 CutA1 divalent ion tolerance protein 12 109 5.1E-34 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 APECO1_RS24080 724056da5dcde608dc50e9bb32aa291c 112 PANTHER PTHR23419 10 112 2.6E-47 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 PIRSF PIRSF000538 1 484 2.1E-137 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 PANTHER PTHR10196:SF72 1 484 0.0 T 22-04-2016 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 Gene3D G3DSA:3.30.420.40 243 482 1.2E-54 T 22-04-2016 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 7.9E-32 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 8.1E-195 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 SUPERFAMILY SSF53067 2 242 8.64E-73 T 22-04-2016 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 SUPERFAMILY SSF53067 242 482 1.3E-62 T 22-04-2016 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 4.6E-87 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 Gene3D G3DSA:3.30.420.40 1 240 8.4E-69 T 22-04-2016 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 PANTHER PTHR10196 1 484 0.0 T 22-04-2016 APECO1_RS20435 9ac0db4179cd1fcee4d2d5d51d60af0d 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APECO1_RS06850 8a47e772e1aa10abe2be552cb8a3750b 115 Pfam PF02924 Bacteriophage lambda head decoration protein D 5 109 3.2E-19 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 APECO1_RS06850 8a47e772e1aa10abe2be552cb8a3750b 115 ProDom PD020518 CAPSID HEAD PROPHAGE DECORATION SUBUNIT SMALL 3D-STRUCTURE MAJOR GIFSY-1 STRUCTURAL 38 110 3.0E-36 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 APECO1_RS06850 8a47e772e1aa10abe2be552cb8a3750b 115 SUPERFAMILY SSF51274 13 113 1.83E-44 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 APECO1_RS06850 8a47e772e1aa10abe2be552cb8a3750b 115 Gene3D G3DSA:2.40.300.10 1 114 3.0E-55 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 APECO1_RS18485 af393b93d0f1a1e9e8b1caaf8dbd93b3 210 Pfam PF10707 PhoP regulatory network protein YrbL 2 185 2.6E-63 T 22-04-2016 IPR019647 PhoP regulatory network protein YrbL APECO1_RS18485 af393b93d0f1a1e9e8b1caaf8dbd93b3 210 SUPERFAMILY SSF56112 13 152 7.07E-9 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS18425 c64901c38cc419fd95efac45ef8a5b3e 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS18425 c64901c38cc419fd95efac45ef8a5b3e 269 SMART SM00382 33 229 1.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS18425 c64901c38cc419fd95efac45ef8a5b3e 269 PANTHER PTHR24220 10 266 4.0E-196 T 22-04-2016 APECO1_RS18425 c64901c38cc419fd95efac45ef8a5b3e 269 Pfam PF00005 ABC transporter 25 172 1.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS18425 c64901c38cc419fd95efac45ef8a5b3e 269 SUPERFAMILY SSF52540 8 237 4.35E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18425 c64901c38cc419fd95efac45ef8a5b3e 269 PANTHER PTHR24220:SF368 10 266 4.0E-196 T 22-04-2016 APECO1_RS18425 c64901c38cc419fd95efac45ef8a5b3e 269 Gene3D G3DSA:3.40.50.300 7 238 3.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 PANTHER PTHR30146 4 331 5.1E-188 T 22-04-2016 APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 PANTHER PTHR30146:SF2 4 331 5.1E-188 T 22-04-2016 APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 7.8E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 Gene3D G3DSA:1.10.260.40 4 59 1.1E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 SMART SM00354 5 75 2.0E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 SUPERFAMILY SSF47413 5 62 5.63E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 SUPERFAMILY SSF53822 63 315 5.5E-61 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 309 9.4E-31 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 Gene3D G3DSA:3.40.50.2300 174 330 4.2E-45 T 22-04-2016 APECO1_RS19685 af00b60b03e6c2236596cdf3d75ee68b 331 Gene3D G3DSA:3.40.50.2300 62 173 6.9E-42 T 22-04-2016 APECO1_RS23685 65f268e13c2a6f528e05f7f5f9cf2214 122 Gene3D G3DSA:3.30.450.20 27 120 4.9E-60 T 22-04-2016 APECO1_RS23685 65f268e13c2a6f528e05f7f5f9cf2214 122 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 6.7E-53 T 22-04-2016 IPR009320 YagB/YeeU/YfjZ APECO1_RS23685 65f268e13c2a6f528e05f7f5f9cf2214 122 SUPERFAMILY SSF143737 8 118 2.35E-56 T 22-04-2016 APECO1_RS08400 cf1de81474f259e035a18a8042ca171f 72 Pfam PF13999 MarB protein 6 70 1.3E-33 T 22-04-2016 IPR025732 MarB protein APECO1_RS08400 cf1de81474f259e035a18a8042ca171f 72 ProDom PD027692 ANTIBIOTIC RESISTANCE MULTIPLE MARB 1 72 2.0E-36 T 22-04-2016 IPR025732 MarB protein APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:1.10.286.20 183 226 5.7E-20 T 22-04-2016 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:3.30.479.20 227 262 1.6E-31 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:3.30.479.20 142 178 1.6E-31 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 Pfam PF00889 Elongation factor TS 71 263 1.5E-66 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 PANTHER PTHR11741 1 283 3.7E-146 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF54713 142 281 1.31E-53 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF54713 56 139 1.24E-20 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 Gene3D G3DSA:1.10.8.10 2 55 7.0E-28 T 22-04-2016 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 80.24 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 22-04-2016 IPR009060 UBA-like GO:0005515 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APECO1_RS00900 5c95adf3bad4ca4fb76bb94204974137 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 3.1E-123 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APECO1_RS08995 cec23b87dbcb2822c751fda67bdbd9a6 69 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 1.7E-34 T 22-04-2016 IPR024493 Protein of unknown function DUF2767 APECO1_RS08995 cec23b87dbcb2822c751fda67bdbd9a6 69 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 69 5.0E-34 T 22-04-2016 APECO1_RS02790 1eabcb0be7365de00cb597fae43e1a06 127 PANTHER PTHR35145 1 122 1.4E-99 T 22-04-2016 APECO1_RS02790 1eabcb0be7365de00cb597fae43e1a06 127 Pfam PF04237 YjbR 15 106 1.3E-20 T 22-04-2016 IPR007351 Uncharacterised protein YjbR APECO1_RS02790 1eabcb0be7365de00cb597fae43e1a06 127 SUPERFAMILY SSF142906 8 119 6.67E-36 T 22-04-2016 APECO1_RS02790 1eabcb0be7365de00cb597fae43e1a06 127 PANTHER PTHR35145:SF2 1 122 1.4E-99 T 22-04-2016 APECO1_RS09985 865aeba049510fa41d5c2c79e03b0e11 246 SUPERFAMILY SSF75625 3 244 7.19E-98 T 22-04-2016 IPR029072 YebC-like APECO1_RS09985 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:1.10.10.200 1 79 7.0E-35 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like APECO1_RS09985 865aeba049510fa41d5c2c79e03b0e11 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.5E-107 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APECO1_RS09985 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:3.30.1270.10 211 245 3.5E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APECO1_RS09985 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:3.30.1270.10 82 134 3.5E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APECO1_RS09985 865aeba049510fa41d5c2c79e03b0e11 246 Gene3D G3DSA:3.30.70.980 135 204 7.2E-31 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 APECO1_RS09985 865aeba049510fa41d5c2c79e03b0e11 246 PANTHER PTHR12532 1 240 5.2E-121 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APECO1_RS09985 865aeba049510fa41d5c2c79e03b0e11 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.763 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APECO1_RS09985 865aeba049510fa41d5c2c79e03b0e11 246 Pfam PF01709 Transcriptional regulator 5 235 2.5E-94 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APECO1_RS09035 0ee7c44a0410966c1e8c43e963e944ef 495 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 466 8.0E-69 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APECO1_RS09035 0ee7c44a0410966c1e8c43e963e944ef 495 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 486 6.7E-194 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 APECO1_RS09035 0ee7c44a0410966c1e8c43e963e944ef 495 PANTHER PTHR30508:SF1 20 495 6.0E-291 T 22-04-2016 APECO1_RS09035 0ee7c44a0410966c1e8c43e963e944ef 495 PANTHER PTHR30508 20 495 6.0E-291 T 22-04-2016 APECO1_RS09035 0ee7c44a0410966c1e8c43e963e944ef 495 SUPERFAMILY SSF101960 41 86 4.32E-137 T 22-04-2016 APECO1_RS09035 0ee7c44a0410966c1e8c43e963e944ef 495 SUPERFAMILY SSF101960 125 492 4.32E-137 T 22-04-2016 APECO1_RS23550 4fec6660c780244bb8b8029661aec823 547 Pfam PF00884 Sulfatase 238 527 1.6E-54 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS23550 4fec6660c780244bb8b8029661aec823 547 SUPERFAMILY SSF53649 239 531 1.57E-20 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS23550 4fec6660c780244bb8b8029661aec823 547 PANTHER PTHR30443 1 544 0.0 T 22-04-2016 APECO1_RS23550 4fec6660c780244bb8b8029661aec823 547 PANTHER PTHR30443:SF0 1 544 0.0 T 22-04-2016 APECO1_RS23550 4fec6660c780244bb8b8029661aec823 547 Pfam PF08019 Domain of unknown function (DUF1705) 59 209 1.8E-43 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 APECO1_RS23550 4fec6660c780244bb8b8029661aec823 547 Gene3D G3DSA:3.40.720.10 239 532 1.2E-15 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS19305 03f58a7009ebbdd8f41b157d962431a9 393 SUPERFAMILY SSF103473 4 385 8.5E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS19305 03f58a7009ebbdd8f41b157d962431a9 393 Gene3D G3DSA:1.20.1250.20 208 381 1.3E-12 T 22-04-2016 APECO1_RS19305 03f58a7009ebbdd8f41b157d962431a9 393 Gene3D G3DSA:1.20.1250.20 6 183 1.2E-16 T 22-04-2016 APECO1_RS19305 03f58a7009ebbdd8f41b157d962431a9 393 PANTHER PTHR23514:SF3 1 388 1.1E-102 T 22-04-2016 APECO1_RS19305 03f58a7009ebbdd8f41b157d962431a9 393 PANTHER PTHR23514 1 388 1.1E-102 T 22-04-2016 APECO1_RS19305 03f58a7009ebbdd8f41b157d962431a9 393 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 31.148 T 22-04-2016 IPR023528 Major facilitator superfamily transporter, TsgA APECO1_RS19305 03f58a7009ebbdd8f41b157d962431a9 393 Pfam PF07690 Major Facilitator Superfamily 14 319 9.1E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS15290 82d2e7d3876ec19e5aff5f23761ff2a6 235 Pfam PF09414 RNA ligase 38 205 2.0E-25 T 22-04-2016 IPR021122 RNA ligase domain, REL/Rln2 APECO1_RS15290 82d2e7d3876ec19e5aff5f23761ff2a6 235 SUPERFAMILY SSF56091 182 228 4.46E-32 T 22-04-2016 APECO1_RS15290 82d2e7d3876ec19e5aff5f23761ff2a6 235 SUPERFAMILY SSF56091 10 145 4.46E-32 T 22-04-2016 APECO1_RS17355 8b399d1c45edef8fe547ae65f24bc12e 232 SUPERFAMILY SSF52540 9 122 1.66E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17355 8b399d1c45edef8fe547ae65f24bc12e 232 Gene3D G3DSA:3.40.50.300 10 230 9.6E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06235 0d7a2a61648ce3de02d0bcbe3cffb739 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 210 4.1E-53 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APECO1_RS06235 0d7a2a61648ce3de02d0bcbe3cffb739 219 PANTHER PTHR11820 16 211 2.1E-86 T 22-04-2016 APECO1_RS06235 0d7a2a61648ce3de02d0bcbe3cffb739 219 SUPERFAMILY SSF56529 11 213 2.88E-70 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APECO1_RS06235 0d7a2a61648ce3de02d0bcbe3cffb739 219 Gene3D G3DSA:3.90.850.10 14 218 4.9E-79 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APECO1_RS16395 9c0a0cb741f85e7f66fe3fa317ce9d7f 482 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 440 1.3E-136 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS16395 9c0a0cb741f85e7f66fe3fa317ce9d7f 482 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 357 377 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS16395 9c0a0cb741f85e7f66fe3fa317ce9d7f 482 PANTHER PTHR11119:SF3 18 450 5.0E-129 T 22-04-2016 APECO1_RS16395 9c0a0cb741f85e7f66fe3fa317ce9d7f 482 PANTHER PTHR11119 18 450 5.0E-129 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS16395 9c0a0cb741f85e7f66fe3fa317ce9d7f 482 TIGRFAM TIGR03173 pbuX: xanthine permease 33 443 7.0E-154 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 APECO1_RS16395 9c0a0cb741f85e7f66fe3fa317ce9d7f 482 Pfam PF00860 Permease family 29 408 5.7E-122 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS16335 e820143993fc85ae295c4a5f64197ca2 256 Gene3D G3DSA:3.40.1190.10 17 122 1.9E-5 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS16335 e820143993fc85ae295c4a5f64197ca2 256 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 22 247 3.5E-89 T 22-04-2016 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC APECO1_RS16335 e820143993fc85ae295c4a5f64197ca2 256 SUPERFAMILY SSF53623 14 123 7.78E-8 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS08475 38b616c6eef1665d15a0661efb303c4a 67 Pfam PF14001 YdfZ protein 3 65 1.1E-33 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ APECO1_RS08475 38b616c6eef1665d15a0661efb303c4a 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 3.9E-38 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ APECO1_RS15385 0fb9b926c58c1b09279c09476a4486a6 187 PIRSF PIRSF038321 2 182 8.3E-88 T 22-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 APECO1_RS15385 0fb9b926c58c1b09279c09476a4486a6 187 PANTHER PTHR40399 3 183 2.5E-100 T 22-04-2016 APECO1_RS15385 0fb9b926c58c1b09279c09476a4486a6 187 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 171 2.8E-75 T 22-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 APECO1_RS15385 0fb9b926c58c1b09279c09476a4486a6 187 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 2.1E-112 T 22-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 APECO1_RS17325 b7e6cbc74db26c0afcdf9edd1072c2ac 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 5.1E-60 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APECO1_RS17325 b7e6cbc74db26c0afcdf9edd1072c2ac 359 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.0E-89 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 APECO1_RS17325 b7e6cbc74db26c0afcdf9edd1072c2ac 359 PANTHER PTHR33529 1 353 1.5E-66 T 22-04-2016 APECO1_RS17325 b7e6cbc74db26c0afcdf9edd1072c2ac 359 PANTHER PTHR33529:SF1 1 353 1.5E-66 T 22-04-2016 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 Gene3D G3DSA:1.10.1390.10 511 548 6.8E-23 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 PANTHER PTHR11469 1 549 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 Gene3D G3DSA:3.40.50.10490 293 510 6.8E-149 T 22-04-2016 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 Gene3D G3DSA:3.40.50.10490 8 98 6.8E-149 T 22-04-2016 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.0E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.0E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.0E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.0E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.0E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.0E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 PANTHER PTHR11469:SF11 1 549 0.0 T 22-04-2016 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 Gene3D G3DSA:3.40.50.10490 99 290 1.1E-92 T 22-04-2016 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 Pfam PF00342 Phosphoglucose isomerase 52 541 9.9E-259 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 43.34 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22980 1a3d36d0671a334f1f6181bded5ccf90 549 SUPERFAMILY SSF53697 5 548 7.79E-230 T 22-04-2016 APECO1_RS12810 03160ddf17145f160397036aab03c01a 296 PANTHER PTHR34611 2 296 2.0E-229 T 22-04-2016 APECO1_RS12810 03160ddf17145f160397036aab03c01a 296 Pfam PF04754 Putative transposase, YhgA-like 8 209 3.6E-89 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like APECO1_RS12810 03160ddf17145f160397036aab03c01a 296 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 291 8.1E-56 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 APECO1_RS12810 03160ddf17145f160397036aab03c01a 296 PANTHER PTHR34611:SF2 2 296 2.0E-229 T 22-04-2016 APECO1_RS07275 b2273e8b84d7e9d2ad1522cf1816d3c0 262 PANTHER PTHR12110:SF13 1 262 3.0E-155 T 22-04-2016 APECO1_RS07275 b2273e8b84d7e9d2ad1522cf1816d3c0 262 PANTHER PTHR12110 1 262 3.0E-155 T 22-04-2016 APECO1_RS07275 b2273e8b84d7e9d2ad1522cf1816d3c0 262 Pfam PF01261 Xylose isomerase-like TIM barrel 19 219 7.1E-27 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS07275 b2273e8b84d7e9d2ad1522cf1816d3c0 262 SUPERFAMILY SSF51658 1 260 3.04E-52 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS07275 b2273e8b84d7e9d2ad1522cf1816d3c0 262 Gene3D G3DSA:3.20.20.150 1 260 1.2E-51 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS04430 555858d2111b8618f6119094283b5f58 118 Pfam PF10743 Regulatory phage protein cox 26 105 3.4E-26 T 22-04-2016 IPR019679 Bacteriophage P2, regulatory protein Cox APECO1_RS04710 127d0173cfd988c9ebeac149d149284b 259 Gene3D G3DSA:3.40.50.620 74 210 1.6E-17 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS04710 127d0173cfd988c9ebeac149d149284b 259 PANTHER PTHR30336 1 259 6.8E-86 T 22-04-2016 APECO1_RS04710 127d0173cfd988c9ebeac149d149284b 259 PANTHER PTHR30336:SF1 1 259 6.8E-86 T 22-04-2016 APECO1_RS04710 127d0173cfd988c9ebeac149d149284b 259 Pfam PF02698 DUF218 domain 80 213 3.7E-28 T 22-04-2016 IPR003848 Domain of unknown function DUF218 APECO1_RS25995 3f5f7ee94b4fcc81b5a4dd04de55c92d 186 Gene3D G3DSA:3.40.50.720 1 120 1.3E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS25995 3f5f7ee94b4fcc81b5a4dd04de55c92d 186 SUPERFAMILY SSF51735 1 119 1.61E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS25995 3f5f7ee94b4fcc81b5a4dd04de55c92d 186 PANTHER PTHR16254:SF28 1 146 2.2E-119 T 22-04-2016 APECO1_RS25995 3f5f7ee94b4fcc81b5a4dd04de55c92d 186 PANTHER PTHR16254 1 146 2.2E-119 T 22-04-2016 APECO1_RS25995 3f5f7ee94b4fcc81b5a4dd04de55c92d 186 Pfam PF02254 TrkA-N domain 6 102 4.7E-22 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APECO1_RS15505 bbd184fb1ceb96533c949c2b2bf970cb 153 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 2.2E-75 T 22-04-2016 IPR021285 Transcription regulator, HycA APECO1_RS16790 7fb10c7025e04c7b20afcc2eb05b3448 418 PANTHER PTHR23522:SF2 1 418 0.0 T 22-04-2016 APECO1_RS16790 7fb10c7025e04c7b20afcc2eb05b3448 418 Gene3D G3DSA:1.20.1250.20 6 121 1.2E-7 T 22-04-2016 APECO1_RS16790 7fb10c7025e04c7b20afcc2eb05b3448 418 Gene3D G3DSA:1.20.1250.20 200 405 1.7E-18 T 22-04-2016 APECO1_RS16790 7fb10c7025e04c7b20afcc2eb05b3448 418 Pfam PF03825 Nucleoside H+ symporter 1 406 1.3E-188 T 22-04-2016 APECO1_RS16790 7fb10c7025e04c7b20afcc2eb05b3448 418 SUPERFAMILY SSF103473 9 406 4.05E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS16790 7fb10c7025e04c7b20afcc2eb05b3448 418 PANTHER PTHR23522 1 418 0.0 T 22-04-2016 APECO1_RS16790 7fb10c7025e04c7b20afcc2eb05b3448 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 2.0E-225 T 22-04-2016 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 APECO1_RS16595 0130d0f1bb5d213bae6b938393625f1d 225 SMART SM00382 28 213 1.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS16595 0130d0f1bb5d213bae6b938393625f1d 225 PANTHER PTHR24220 3 223 1.9E-58 T 22-04-2016 APECO1_RS16595 0130d0f1bb5d213bae6b938393625f1d 225 SUPERFAMILY SSF52540 2 223 2.98E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16595 0130d0f1bb5d213bae6b938393625f1d 225 Gene3D G3DSA:3.40.50.300 1 222 9.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16595 0130d0f1bb5d213bae6b938393625f1d 225 Pfam PF00005 ABC transporter 21 164 2.5E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS16595 0130d0f1bb5d213bae6b938393625f1d 225 PANTHER PTHR24220:SF308 3 223 1.9E-58 T 22-04-2016 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 SUPERFAMILY SSF52279 395 464 3.66E-58 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 SUPERFAMILY SSF52279 495 651 3.66E-58 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 PANTHER PTHR30620:SF5 35 471 0.0 T 22-04-2016 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 PANTHER PTHR30620:SF5 487 765 0.0 T 22-04-2016 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 9.9E-61 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 5.3E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 5.3E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 5.3E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 5.3E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 5.3E-22 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 SUPERFAMILY SSF51445 34 394 1.9E-98 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 Gene3D G3DSA:3.40.50.1700 383 651 2.6E-80 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 3.4E-100 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 Gene3D G3DSA:3.20.20.300 35 366 1.8E-103 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 Pfam PF14310 Fibronectin type III-like domain 686 754 3.1E-23 T 22-04-2016 IPR026891 Fibronectin type III-like domain APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 SMART SM01217 685 754 8.0E-32 T 22-04-2016 IPR026891 Fibronectin type III-like domain APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 PANTHER PTHR30620 35 471 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 PANTHER PTHR30620 487 765 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APECO1_RS11930 ed67ceb70f3919e06e610065546680f2 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 Gene3D G3DSA:1.10.1660.10 57 136 5.1E-34 T 22-04-2016 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 SUPERFAMILY SSF46955 2 121 1.9E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 1.8E-61 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 9.4E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 9.4E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 9.4E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 SMART SM00422 2 71 2.1E-34 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 Pfam PF13411 MerR HTH family regulatory protein 2 69 6.8E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 PANTHER PTHR30204:SF18 1 123 7.3E-62 T 22-04-2016 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 Gene3D G3DSA:1.10.1660.10 1 56 3.6E-28 T 22-04-2016 APECO1_RS18930 91d525c525296a67e7333edfd59c048d 141 PANTHER PTHR30204 1 123 7.3E-62 T 22-04-2016 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 PANTHER PTHR21256 1 203 9.8E-122 T 22-04-2016 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 38.091 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 PANTHER PTHR21256:SF16 1 203 9.8E-122 T 22-04-2016 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.187 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 6.8E-31 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 SUPERFAMILY SSF101386 115 202 3.27E-23 T 22-04-2016 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 4.3E-30 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 202 4.5E-18 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 SUPERFAMILY SSF141734 6 122 7.19E-47 T 22-04-2016 APECO1_RS11265 7a1d64718ed2cf5dab23fc388bfb47a9 203 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 2.0E-25 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APECO1_RS03550 703b5b88414beb1a27b0b581ce2b9628 227 PANTHER PTHR30625:SF3 1 225 4.7E-79 T 22-04-2016 APECO1_RS03550 703b5b88414beb1a27b0b581ce2b9628 227 PANTHER PTHR30625 1 225 4.7E-79 T 22-04-2016 APECO1_RS03550 703b5b88414beb1a27b0b581ce2b9628 227 TIGRFAM TIGR02796 tolQ: protein TolQ 2 216 7.9E-94 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 APECO1_RS03550 703b5b88414beb1a27b0b581ce2b9628 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 75 204 5.4E-42 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APECO1_RS01345 941260bdf8d0d400ea3256849a78f047 204 Gene3D G3DSA:3.30.160.20 107 173 5.0E-26 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APECO1_RS01345 941260bdf8d0d400ea3256849a78f047 204 PANTHER PTHR11075 23 204 5.0E-90 T 22-04-2016 APECO1_RS01345 941260bdf8d0d400ea3256849a78f047 204 Pfam PF00472 RF-1 domain 106 182 8.2E-23 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APECO1_RS01345 941260bdf8d0d400ea3256849a78f047 204 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 2 201 2.4E-99 T 22-04-2016 IPR017509 Putative peptide chain release factor H APECO1_RS01345 941260bdf8d0d400ea3256849a78f047 204 SUPERFAMILY SSF75620 3 196 3.27E-47 T 22-04-2016 APECO1_RS01345 941260bdf8d0d400ea3256849a78f047 204 PANTHER PTHR11075:SF53 23 204 5.0E-90 T 22-04-2016 APECO1_RS01345 941260bdf8d0d400ea3256849a78f047 204 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 115 131 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APECO1_RS00030 1febeef5d585bc24c89d87e041b874af 98 Pfam PF10697 Protein of unknown function (DUF2502) 25 86 2.6E-15 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 APECO1_RS13050 0f1aad4b670cf413d5422ddfbe8155fb 82 Gene3D G3DSA:1.10.1220.10 8 75 3.3E-21 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APECO1_RS13050 0f1aad4b670cf413d5422ddfbe8155fb 82 Pfam PF03869 Arc-like DNA binding domain 12 45 1.1E-10 T 22-04-2016 IPR005569 Arc-like DNA binding domain GO:0003677 APECO1_RS13050 0f1aad4b670cf413d5422ddfbe8155fb 82 SUPERFAMILY SSF47598 8 61 1.71E-13 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APECO1_RS01270 39a8d89428d44034453a43fcc360e476 256 PANTHER PTHR23088:SF28 1 251 4.8E-168 T 22-04-2016 APECO1_RS01270 39a8d89428d44034453a43fcc360e476 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 6.9E-31 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APECO1_RS01270 39a8d89428d44034453a43fcc360e476 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site APECO1_RS01270 39a8d89428d44034453a43fcc360e476 256 Gene3D G3DSA:3.60.110.10 4 251 5.2E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APECO1_RS01270 39a8d89428d44034453a43fcc360e476 256 SUPERFAMILY SSF56317 4 249 2.22E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APECO1_RS01270 39a8d89428d44034453a43fcc360e476 256 PANTHER PTHR23088 1 251 4.8E-168 T 22-04-2016 APECO1_RS20985 fc6d51953f67c437bdd39958c2e4ad8e 463 PANTHER PTHR11662 1 460 2.9E-292 T 22-04-2016 APECO1_RS20985 fc6d51953f67c437bdd39958c2e4ad8e 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 APECO1_RS20985 fc6d51953f67c437bdd39958c2e4ad8e 463 PANTHER PTHR11662:SF244 1 460 2.9E-292 T 22-04-2016 APECO1_RS20985 fc6d51953f67c437bdd39958c2e4ad8e 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 4.8E-145 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS20985 fc6d51953f67c437bdd39958c2e4ad8e 463 Gene3D G3DSA:1.20.1250.20 30 231 2.7E-33 T 22-04-2016 APECO1_RS20985 fc6d51953f67c437bdd39958c2e4ad8e 463 Gene3D G3DSA:1.20.1250.20 252 456 1.9E-29 T 22-04-2016 APECO1_RS20985 fc6d51953f67c437bdd39958c2e4ad8e 463 Pfam PF07690 Major Facilitator Superfamily 35 397 3.5E-33 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS20985 fc6d51953f67c437bdd39958c2e4ad8e 463 SUPERFAMILY SSF103473 18 451 2.62E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS20985 fc6d51953f67c437bdd39958c2e4ad8e 463 PIRSF PIRSF002808 9 461 1.2E-100 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS05040 a25e42c3067fde633731d827a7237dd0 390 Gene3D G3DSA:1.10.3820.10 10 185 3.2E-29 T 22-04-2016 APECO1_RS05040 a25e42c3067fde633731d827a7237dd0 390 Gene3D G3DSA:1.10.3820.10 328 333 3.2E-29 T 22-04-2016 APECO1_RS05040 a25e42c3067fde633731d827a7237dd0 390 PIRSF PIRSF000014 1 383 1.1E-183 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 APECO1_RS05040 a25e42c3067fde633731d827a7237dd0 390 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 2 383 1.7E-198 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 APECO1_RS05040 a25e42c3067fde633731d827a7237dd0 390 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 184 3.1E-67 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal APECO1_RS05040 a25e42c3067fde633731d827a7237dd0 390 PANTHER PTHR30333:SF2 1 390 0.0 T 22-04-2016 APECO1_RS05040 a25e42c3067fde633731d827a7237dd0 390 SUPERFAMILY SSF48695 8 185 5.06E-52 T 22-04-2016 IPR011031 Multihaem cytochrome APECO1_RS05040 a25e42c3067fde633731d827a7237dd0 390 PANTHER PTHR30333 1 390 0.0 T 22-04-2016 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 2.2E-9 T 22-04-2016 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 2.2E-9 T 22-04-2016 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 2.2E-9 T 22-04-2016 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 2.2E-9 T 22-04-2016 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 2.2E-9 T 22-04-2016 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 PANTHER PTHR23501 3 475 0.0 T 22-04-2016 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 Gene3D G3DSA:1.20.1250.20 14 187 1.5E-25 T 22-04-2016 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 Gene3D G3DSA:1.20.1250.20 258 451 2.9E-14 T 22-04-2016 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 SUPERFAMILY SSF103473 245 457 5.23E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 SUPERFAMILY SSF103473 13 195 5.23E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 Pfam PF07690 Major Facilitator Superfamily 17 406 3.8E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 433 3.1E-79 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APECO1_RS21410 24d36ebd609c6e2979d3235e8f6ccc37 475 PANTHER PTHR23501:SF1 3 475 0.0 T 22-04-2016 APECO1_RS16745 b2c8bb65cb93b78be5cefb5f6445d71a 335 Pfam PF06717 Protein of unknown function (DUF1202) 14 320 2.2E-194 T 22-04-2016 IPR009592 Protein of unknown function DUF1202 APECO1_RS22160 32bcade7fcb1b3b6ab9f6f652619e5d2 295 PANTHER PTHR10091 1 212 6.5E-31 T 22-04-2016 APECO1_RS22160 32bcade7fcb1b3b6ab9f6f652619e5d2 295 SUPERFAMILY SSF74650 26 292 6.91E-43 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS22160 32bcade7fcb1b3b6ab9f6f652619e5d2 295 PANTHER PTHR10091:SF5 1 212 6.5E-31 T 22-04-2016 APECO1_RS22160 32bcade7fcb1b3b6ab9f6f652619e5d2 295 Pfam PF01263 Aldose 1-epimerase 28 213 6.7E-21 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APECO1_RS22160 32bcade7fcb1b3b6ab9f6f652619e5d2 295 Gene3D G3DSA:2.70.98.10 17 211 4.8E-17 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APECO1_RS07335 a235e41286a7eb789939a244922ffe69 242 SUPERFAMILY SSF53187 129 234 3.31E-33 T 22-04-2016 APECO1_RS07335 a235e41286a7eb789939a244922ffe69 242 SUPERFAMILY SSF53187 16 102 3.31E-33 T 22-04-2016 APECO1_RS07335 a235e41286a7eb789939a244922ffe69 242 Pfam PF00246 Zinc carboxypeptidase 73 157 1.3E-12 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APECO1_RS07335 a235e41286a7eb789939a244922ffe69 242 Gene3D G3DSA:3.40.630.10 18 223 3.1E-43 T 22-04-2016 APECO1_RS18465 261ff6da90a7a3f692be0c00dde3dae7 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.9E-37 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APECO1_RS18465 261ff6da90a7a3f692be0c00dde3dae7 95 SUPERFAMILY SSF69754 1 95 8.11E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APECO1_RS18465 261ff6da90a7a3f692be0c00dde3dae7 95 Gene3D G3DSA:3.30.160.100 1 95 3.7E-37 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APECO1_RS18465 261ff6da90a7a3f692be0c00dde3dae7 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 3.7E-27 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APECO1_RS18465 261ff6da90a7a3f692be0c00dde3dae7 95 PANTHER PTHR33231 1 95 8.8E-41 T 22-04-2016 APECO1_RS07945 ef283dd006fde22c0256582659f9d0ab 326 PANTHER PTHR22572 25 142 4.4E-58 T 22-04-2016 APECO1_RS07945 ef283dd006fde22c0256582659f9d0ab 326 PANTHER PTHR22572 197 299 4.4E-58 T 22-04-2016 APECO1_RS07945 ef283dd006fde22c0256582659f9d0ab 326 PANTHER PTHR22572:SF13 25 142 4.4E-58 T 22-04-2016 APECO1_RS07945 ef283dd006fde22c0256582659f9d0ab 326 PANTHER PTHR22572:SF13 197 299 4.4E-58 T 22-04-2016 APECO1_RS07945 ef283dd006fde22c0256582659f9d0ab 326 SUPERFAMILY SSF51161 4 318 2.61E-58 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS07945 ef283dd006fde22c0256582659f9d0ab 326 Gene3D G3DSA:2.160.10.10 46 132 9.8E-27 T 22-04-2016 APECO1_RS07945 ef283dd006fde22c0256582659f9d0ab 326 Gene3D G3DSA:2.160.10.10 242 301 9.8E-27 T 22-04-2016 APECO1_RS24435 0782e9121728c4a15998d4119eccb48c 422 Pfam PF07805 HipA-like N-terminal domain 184 255 2.3E-9 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 APECO1_RS24435 0782e9121728c4a15998d4119eccb48c 422 PANTHER PTHR37419 182 414 6.7E-19 T 22-04-2016 APECO1_RS24435 0782e9121728c4a15998d4119eccb48c 422 Pfam PF07804 HipA-like C-terminal domain 261 398 5.2E-28 T 22-04-2016 IPR012893 HipA-like, C-terminal APECO1_RS24435 0782e9121728c4a15998d4119eccb48c 422 PANTHER PTHR37419:SF2 182 414 6.7E-19 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Pfam PF00668 Condensation domain 112 409 7.4E-71 T 22-04-2016 IPR001242 Condensation domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Pfam PF00668 Condensation domain 1495 1778 7.3E-35 T 22-04-2016 IPR001242 Condensation domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF47336 21 124 3.89E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF52777 296 536 1.11E-37 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF56801 549 1018 1.7E-137 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF56801 1344 1422 1.7E-137 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF47336 1405 1475 5.61E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 PANTHER PTHR24095 1337 1805 0.0 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 PANTHER PTHR24095 22 1003 0.0 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Gene3D G3DSA:2.30.38.10 880 956 1.8E-22 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Gene3D G3DSA:3.40.50.980 568 715 2.6E-34 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 ProSitePatterns PS00012 Phosphopantetheine attachment site. 47 62 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SMART SM00823 Phosphopantetheine attachment site 1949 2017 0.0012 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SMART SM00823 Phosphopantetheine attachment site 1410 1478 0.12 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Pfam PF08242 Methyltransferase domain 1182 1279 5.3E-9 T 22-04-2016 IPR013217 Methyltransferase type 12 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 594 990 5.6E-119 T 22-04-2016 IPR010071 Amino acid adenylation domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF52777 117 289 1.56E-18 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Pfam PF08415 Nonribosomal peptide synthase 431 486 3.2E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Pfam PF08415 Nonribosomal peptide synthase 1802 1858 6.0E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Gene3D G3DSA:3.40.50.980 716 872 5.2E-42 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Gene3D G3DSA:3.40.50.150 1162 1322 4.6E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF52777 1489 1680 5.56E-20 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Gene3D G3DSA:1.10.1200.10 22 92 1.4E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Gene3D G3DSA:1.10.1200.10 1938 2015 4.2E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Gene3D G3DSA:1.10.1200.10 1414 1476 5.8E-21 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF52777 1669 1908 5.0E-40 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Pfam PF00501 AMP-binding enzyme 575 965 5.1E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF47336 1946 2014 1.87E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 PANTHER PTHR24095:SF137 1337 1805 0.0 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 PANTHER PTHR24095:SF137 22 1003 0.0 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Pfam PF00550 Phosphopantetheine attachment site 22 82 9.6E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Pfam PF00550 Phosphopantetheine attachment site 1952 2013 4.1E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Pfam PF00550 Phosphopantetheine attachment site 1412 1473 3.3E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Gene3D G3DSA:3.30.300.30 962 1014 2.9E-30 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 Gene3D G3DSA:3.30.300.30 1349 1413 2.9E-30 T 22-04-2016 APECO1_RS10850 e86cdceddc0a1bde08041a6e197626f6 2035 SUPERFAMILY SSF53335 1164 1326 4.52E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 Gene3D G3DSA:3.40.50.300 940 1246 1.1E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 PANTHER PTHR22683 467 706 0.0 T 22-04-2016 APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 SUPERFAMILY SSF46785 1281 1344 4.72E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 PANTHER PTHR22683:SF41 467 706 0.0 T 22-04-2016 APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 PANTHER PTHR22683:SF41 736 1344 0.0 T 22-04-2016 APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 PANTHER PTHR22683:SF41 1 316 0.0 T 22-04-2016 APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 SUPERFAMILY SSF52540 940 1252 5.31E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 9.6E-42 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 Pfam PF01580 FtsK/SpoIIIE family 966 1179 1.7E-76 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 Pfam PF09397 Ftsk gamma domain 1282 1342 1.9E-28 T 22-04-2016 IPR018541 FtsK gamma domain APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 SMART SM00843 1280 1345 4.4E-42 T 22-04-2016 IPR018541 FtsK gamma domain APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 PANTHER PTHR22683 736 1344 0.0 T 22-04-2016 APECO1_RS04370 82e9cf4af89a80915c758ee027250738 1347 PANTHER PTHR22683 1 316 0.0 T 22-04-2016 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 525 5.7E-257 T 22-04-2016 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 Pfam PF00367 phosphotransferase system, EIIB 455 486 2.2E-16 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 PANTHER PTHR30009:SF1 12 525 0.0 T 22-04-2016 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 SUPERFAMILY SSF55604 454 525 2.88E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 3.3E-98 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 PANTHER PTHR30009 12 525 0.0 T 22-04-2016 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 Gene3D G3DSA:3.30.1360.60 454 525 4.3E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 Pfam PF02378 Phosphotransferase system, EIIC 19 361 1.4E-86 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS08700 406d09fc5badb2a329d7054293c3df5c 530 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 511 3.1E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS18440 471f78badf345b30ef2b3edd9adabdfa 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 9.3E-78 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APECO1_RS18440 471f78badf345b30ef2b3edd9adabdfa 188 PANTHER PTHR21485 5 186 1.1E-71 T 22-04-2016 APECO1_RS18440 471f78badf345b30ef2b3edd9adabdfa 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 93 158 4.0E-11 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS18440 471f78badf345b30ef2b3edd9adabdfa 188 SUPERFAMILY SSF56784 22 181 1.97E-41 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS18440 471f78badf345b30ef2b3edd9adabdfa 188 Gene3D G3DSA:3.40.50.1000 16 181 1.4E-49 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS18440 471f78badf345b30ef2b3edd9adabdfa 188 PIRSF PIRSF006118 13 188 5.6E-75 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APECO1_RS17905 6d6dc1607d8e42d0611832213f683924 356 SUPERFAMILY SSF56935 268 347 6.1E-5 T 22-04-2016 APECO1_RS17905 6d6dc1607d8e42d0611832213f683924 356 SUPERFAMILY SSF56935 47 192 6.1E-5 T 22-04-2016 APECO1_RS24765 54678d4ebc2183f532a4cfe56a7ba24e 187 Gene3D G3DSA:3.40.50.300 3 166 3.0E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24765 54678d4ebc2183f532a4cfe56a7ba24e 187 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 167 4.1E-73 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 APECO1_RS24765 54678d4ebc2183f532a4cfe56a7ba24e 187 SUPERFAMILY SSF52540 3 165 1.03E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24765 54678d4ebc2183f532a4cfe56a7ba24e 187 PANTHER PTHR11603 1 187 1.6E-84 T 22-04-2016 APECO1_RS24765 54678d4ebc2183f532a4cfe56a7ba24e 187 Pfam PF01202 Shikimate kinase 12 161 1.0E-10 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS12290 be35259aab42a9e7a8dd5f49a175ab37 205 Gene3D G3DSA:3.40.50.300 2 189 1.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12290 be35259aab42a9e7a8dd5f49a175ab37 205 PANTHER PTHR24220 3 199 3.7E-110 T 22-04-2016 APECO1_RS12290 be35259aab42a9e7a8dd5f49a175ab37 205 SUPERFAMILY SSF52540 2 187 8.87E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS12290 be35259aab42a9e7a8dd5f49a175ab37 205 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS12290 be35259aab42a9e7a8dd5f49a175ab37 205 Pfam PF00005 ABC transporter 19 154 2.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS12290 be35259aab42a9e7a8dd5f49a175ab37 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 198 1.1E-86 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 APECO1_RS12290 be35259aab42a9e7a8dd5f49a175ab37 205 PANTHER PTHR24220:SF508 3 199 3.7E-110 T 22-04-2016 APECO1_RS12290 be35259aab42a9e7a8dd5f49a175ab37 205 SMART SM00382 26 204 1.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS17720 57b312f01c833f54b1c3693631577aaa 840 SUPERFAMILY SSF141729 35 157 1.57E-30 T 22-04-2016 APECO1_RS17720 57b312f01c833f54b1c3693631577aaa 840 Pfam PF13954 PapC N-terminal domain 37 181 1.7E-37 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APECO1_RS17720 57b312f01c833f54b1c3693631577aaa 840 Pfam PF13953 PapC C-terminal domain 765 819 1.4E-11 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APECO1_RS17720 57b312f01c833f54b1c3693631577aaa 840 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 313 323 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APECO1_RS17720 57b312f01c833f54b1c3693631577aaa 840 PANTHER PTHR30451:SF4 3 840 0.0 T 22-04-2016 APECO1_RS17720 57b312f01c833f54b1c3693631577aaa 840 PANTHER PTHR30451 3 840 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS17720 57b312f01c833f54b1c3693631577aaa 840 Pfam PF00577 Outer membrane usher protein 199 752 1.7E-169 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 SUPERFAMILY SSF58014 42 138 1.57E-26 T 22-04-2016 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 SUPERFAMILY SSF51064 139 195 1.44E-16 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 Pfam PF01025 GrpE 35 194 7.3E-47 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 PANTHER PTHR21237 1 197 6.4E-60 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 Gene3D G3DSA:2.30.22.10 138 196 8.2E-24 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 Hamap MF_01151 Protein GrpE [grpE]. 4 194 20.664 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 PRINTS PR00773 GrpE protein signature 173 192 1.3E-25 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 PRINTS PR00773 GrpE protein signature 63 79 1.3E-25 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 PRINTS PR00773 GrpE protein signature 146 161 1.3E-25 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 PRINTS PR00773 GrpE protein signature 91 106 1.3E-25 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APECO1_RS14795 7a6cb5d61e2f9523197249700cf7a532 197 Gene3D G3DSA:3.90.20.20 34 137 1.6E-32 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil APECO1_RS19615 e1a4beaf83273675e56343b749d2367a 169 SUPERFAMILY SSF49401 46 164 8.95E-19 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS19615 e1a4beaf83273675e56343b749d2367a 169 PANTHER PTHR33420 22 164 3.5E-19 T 22-04-2016 APECO1_RS19615 e1a4beaf83273675e56343b749d2367a 169 Gene3D G3DSA:2.60.40.1090 44 163 1.1E-21 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS03340 0782f6f252c33425908184b0f367952b 97 SUPERFAMILY SSF47598 51 86 5.78E-5 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APECO1_RS03340 0782f6f252c33425908184b0f367952b 97 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 4.7E-10 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 APECO1_RS23340 8fab423b4d3df6c9b5c6273478c06404 278 Pfam PF00005 ABC transporter 22 177 4.7E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23340 8fab423b4d3df6c9b5c6273478c06404 278 Gene3D G3DSA:3.40.50.300 6 247 3.9E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23340 8fab423b4d3df6c9b5c6273478c06404 278 SMART SM00382 29 226 2.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23340 8fab423b4d3df6c9b5c6273478c06404 278 PANTHER PTHR24220 7 247 4.9E-97 T 22-04-2016 APECO1_RS23340 8fab423b4d3df6c9b5c6273478c06404 278 SUPERFAMILY SSF52540 5 236 9.16E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23340 8fab423b4d3df6c9b5c6273478c06404 278 PANTHER PTHR24220:SF442 7 247 4.9E-97 T 22-04-2016 APECO1_RS15965 56666341eb965565002ed7e8c4e981af 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 6.6E-52 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APECO1_RS15965 56666341eb965565002ed7e8c4e981af 166 PANTHER PTHR35850 1 165 1.5E-70 T 22-04-2016 APECO1_RS15965 56666341eb965565002ed7e8c4e981af 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 1.6E-48 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APECO1_RS15965 56666341eb965565002ed7e8c4e981af 166 PANTHER PTHR35850:SF2 1 165 1.5E-70 T 22-04-2016 APECO1_RS15965 56666341eb965565002ed7e8c4e981af 166 PIRSF PIRSF028301 1 166 5.8E-54 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 Gene3D G3DSA:3.20.20.70 2 342 9.3E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 PANTHER PTHR11911:SF97 1 163 2.0E-228 T 22-04-2016 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 PANTHER PTHR11911:SF97 181 347 2.0E-228 T 22-04-2016 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.7E-214 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 PIRSF PIRSF000235 1 347 7.1E-200 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 PANTHER PTHR11911 1 163 2.0E-228 T 22-04-2016 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 PANTHER PTHR11911 181 347 2.0E-228 T 22-04-2016 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 SMART SM01240 7 347 2.2E-139 T 22-04-2016 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 SUPERFAMILY SSF51412 6 336 8.11E-100 T 22-04-2016 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 3.5E-78 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APECO1_RS00555 e774b4bd360a8560af7557b6b005cc1c 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.971 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 PANTHER PTHR10612 1 176 9.1E-56 T 22-04-2016 APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 SUPERFAMILY SSF50814 15 176 9.98E-50 T 22-04-2016 IPR011038 Calycin-like APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 2.6E-51 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 2.6E-51 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 2.6E-51 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 2.6E-51 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 2.6E-51 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 2.6E-51 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 2.6E-51 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 Gene3D G3DSA:2.40.128.20 2 175 9.3E-61 T 22-04-2016 IPR012674 Calycin APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 PIRSF PIRSF036893 1 177 3.2E-52 T 22-04-2016 IPR022271 Lipocalin, ApoD type APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 22-04-2016 IPR022272 Lipocalin family conserved site APECO1_RS24150 642602ef9684aab00daeeae70738fc17 177 Pfam PF08212 Lipocalin-like domain 34 174 1.5E-50 T 22-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain APECO1_RS13375 7e0148b9955b55d6cbdc9ebbfda702b9 314 PANTHER PTHR36838 1 313 1.9E-106 T 22-04-2016 APECO1_RS13375 7e0148b9955b55d6cbdc9ebbfda702b9 314 Pfam PF03547 Membrane transport protein 6 161 8.1E-35 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APECO1_RS13375 7e0148b9955b55d6cbdc9ebbfda702b9 314 Pfam PF03547 Membrane transport protein 166 307 1.7E-28 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APECO1_RS13375 7e0148b9955b55d6cbdc9ebbfda702b9 314 PANTHER PTHR36838:SF1 1 313 1.9E-106 T 22-04-2016 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 22-04-2016 IPR010916 TonB box, conserved site APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 PANTHER PTHR32552 68 747 1.5E-304 T 22-04-2016 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 PANTHER PTHR32552 13 44 1.5E-304 T 22-04-2016 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 730 747 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 Gene3D G3DSA:2.40.170.20 196 747 2.6E-176 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 Pfam PF00593 TonB dependent receptor 510 745 3.7E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 PANTHER PTHR32552:SF17 68 747 1.5E-304 T 22-04-2016 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 PANTHER PTHR32552:SF17 13 44 1.5E-304 T 22-04-2016 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 SUPERFAMILY SSF56935 68 747 2.57E-144 T 22-04-2016 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 180 4.1E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 Gene3D G3DSA:2.170.130.10 32 192 1.9E-39 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS00810 06679c3f5a329d6f5a8366f3c48c8186 747 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 747 5.8E-207 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 Gene3D G3DSA:3.40.30.10 8 83 3.3E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 1.9E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 Gene3D G3DSA:1.20.1050.10 90 215 2.3E-50 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 SUPERFAMILY SSF52833 1 78 1.1E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 7.2E-104 T 22-04-2016 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 PANTHER PTHR11260:SF237 1 215 5.2E-129 T 22-04-2016 APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 214 4.6E-49 T 22-04-2016 IPR007494 Glutaredoxin 2, C-terminal APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 PANTHER PTHR11260 1 215 5.2E-129 T 22-04-2016 APECO1_RS05370 c7aa224648b2c0d69c21c2f6fed97c1d 215 SUPERFAMILY SSF47616 76 215 7.14E-49 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 Gene3D G3DSA:2.60.300.12 1 97 2.9E-17 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 PANTHER PTHR10072 1 97 5.4E-95 T 22-04-2016 APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 PANTHER PTHR10072 147 188 5.4E-95 T 22-04-2016 APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 2.0E-28 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 Pfam PF01106 NifU-like domain 111 177 2.6E-20 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 1.4E-12 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 PANTHER PTHR10072:SF37 1 97 5.4E-95 T 22-04-2016 APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 PANTHER PTHR10072:SF37 147 188 5.4E-95 T 22-04-2016 APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.432 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 SUPERFAMILY SSF117916 95 184 2.14E-25 T 22-04-2016 APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 SUPERFAMILY SSF89360 1 97 2.16E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS19530 8924b747df2ef2fc99fc59d93ddb35c8 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.7E-100 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 APECO1_RS15295 2c8eac277fdd3f683ba29ef4d431ccac 370 SUPERFAMILY SSF109604 32 165 4.54E-11 T 22-04-2016 APECO1_RS15295 2c8eac277fdd3f683ba29ef4d431ccac 370 Pfam PF13671 AAA domain 226 355 1.2E-23 T 22-04-2016 APECO1_RS15295 2c8eac277fdd3f683ba29ef4d431ccac 370 SUPERFAMILY SSF52540 221 365 1.17E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15295 2c8eac277fdd3f683ba29ef4d431ccac 370 Gene3D G3DSA:3.40.50.300 225 359 2.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15295 2c8eac277fdd3f683ba29ef4d431ccac 370 Gene3D G3DSA:1.10.3210.10 32 164 3.2E-6 T 22-04-2016 IPR006674 HD domain APECO1_RS03930 23b8aa955e966f3380b21e304332387f 219 Gene3D G3DSA:1.10.3720.10 13 217 4.4E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03930 23b8aa955e966f3380b21e304332387f 219 PANTHER PTHR30614 1 219 3.9E-179 T 22-04-2016 APECO1_RS03930 23b8aa955e966f3380b21e304332387f 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 3.7E-32 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS03930 23b8aa955e966f3380b21e304332387f 219 SUPERFAMILY SSF161098 13 202 4.71E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03930 23b8aa955e966f3380b21e304332387f 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.2E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03930 23b8aa955e966f3380b21e304332387f 219 PANTHER PTHR30614:SF13 1 219 3.9E-179 T 22-04-2016 APECO1_RS04405 28d23a316b4318eda4ed08bc4d0adf2c 208 Gene3D G3DSA:3.40.50.850 3 205 8.0E-49 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS04405 28d23a316b4318eda4ed08bc4d0adf2c 208 PANTHER PTHR14119:SF11 5 202 1.3E-122 T 22-04-2016 APECO1_RS04405 28d23a316b4318eda4ed08bc4d0adf2c 208 PANTHER PTHR14119 5 202 1.3E-122 T 22-04-2016 APECO1_RS04405 28d23a316b4318eda4ed08bc4d0adf2c 208 SUPERFAMILY SSF52499 3 202 5.76E-54 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS04405 28d23a316b4318eda4ed08bc4d0adf2c 208 Pfam PF00857 Isochorismatase family 14 165 1.5E-21 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APECO1_RS03555 029ef8d31b6e4eba21b7bb703a4276ae 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 2.4E-23 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APECO1_RS03555 029ef8d31b6e4eba21b7bb703a4276ae 142 PANTHER PTHR30558 1 141 1.5E-70 T 22-04-2016 APECO1_RS03555 029ef8d31b6e4eba21b7bb703a4276ae 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 1.4E-39 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 APECO1_RS03555 029ef8d31b6e4eba21b7bb703a4276ae 142 PANTHER PTHR30558:SF7 1 141 1.5E-70 T 22-04-2016 APECO1_RS02985 bd3d0bf51c8cc3768cdeebf787b2076c 183 Hamap MF_00398 Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase [citX]. 4 181 36.134 T 22-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 APECO1_RS02985 bd3d0bf51c8cc3768cdeebf787b2076c 183 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 13 176 2.8E-54 T 22-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 APECO1_RS02985 bd3d0bf51c8cc3768cdeebf787b2076c 183 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 13 175 3.4E-61 T 22-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 APECO1_RS03720 431e961b0351964d488ff3312a0edd1e 350 PANTHER PTHR30349 1 121 3.0E-61 T 22-04-2016 APECO1_RS03720 431e961b0351964d488ff3312a0edd1e 350 SUPERFAMILY SSF54506 170 350 7.32E-58 T 22-04-2016 APECO1_RS03720 431e961b0351964d488ff3312a0edd1e 350 Gene3D G3DSA:3.10.310.10 2 175 2.6E-77 T 22-04-2016 APECO1_RS03720 431e961b0351964d488ff3312a0edd1e 350 Gene3D G3DSA:3.10.310.10 176 328 1.9E-55 T 22-04-2016 APECO1_RS03720 431e961b0351964d488ff3312a0edd1e 350 SUPERFAMILY SSF54506 2 167 1.83E-63 T 22-04-2016 APECO1_RS03720 431e961b0351964d488ff3312a0edd1e 350 Pfam PF04303 PrpF protein 1 350 1.3E-161 T 22-04-2016 IPR007400 PrpF protein APECO1_RS03720 431e961b0351964d488ff3312a0edd1e 350 PANTHER PTHR30349:SF39 1 121 3.0E-61 T 22-04-2016 APECO1_RS01215 5e40da374f08c0599e20e910bbd0c17e 167 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 9 162 1.3E-51 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APECO1_RS01215 5e40da374f08c0599e20e910bbd0c17e 167 PANTHER PTHR35850 1 163 2.8E-59 T 22-04-2016 APECO1_RS01215 5e40da374f08c0599e20e910bbd0c17e 167 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 161 1.4E-44 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APECO1_RS01215 5e40da374f08c0599e20e910bbd0c17e 167 PIRSF PIRSF028301 1 167 1.3E-53 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APECO1_RS01215 5e40da374f08c0599e20e910bbd0c17e 167 PANTHER PTHR35850:SF2 1 163 2.8E-59 T 22-04-2016 APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 Pfam PF00005 ABC transporter 21 174 4.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 Pfam PF00005 ABC transporter 280 437 6.4E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 PANTHER PTHR24220 7 392 2.0E-188 T 22-04-2016 APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 SMART SM00382 30 222 1.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 SMART SM00382 288 491 0.024 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 SUPERFAMILY SSF52540 257 504 3.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 SUPERFAMILY SSF52540 4 235 2.78E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 PANTHER PTHR24220:SF416 7 392 2.0E-188 T 22-04-2016 APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 Gene3D G3DSA:3.40.50.300 3 240 7.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23415 6985e33cd87f30bf91ee47258fbcae98 510 Gene3D G3DSA:3.40.50.300 265 498 3.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS20300 ce532c8743fbc17b41911b5565021cdc 423 Pfam PF03222 Tryptophan/tyrosine permease family 21 404 2.0E-6 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APECO1_RS20300 ce532c8743fbc17b41911b5565021cdc 423 PANTHER PTHR35334 2 423 0.0 T 22-04-2016 APECO1_RS20300 ce532c8743fbc17b41911b5565021cdc 423 PANTHER PTHR35334:SF5 2 423 0.0 T 22-04-2016 APECO1_RS03835 0c4af9812438beecccfd69cc54650214 136 Pfam PF11076 Putative inner membrane protein YbhQ 1 132 3.1E-70 T 22-04-2016 IPR021303 Uncharacterised protein family, inner membrane, YbhQ APECO1_RS25460 b246ad5123da9483da0587cbb72e8b1b 1131 Gene3D G3DSA:2.60.40.10 618 709 1.4E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS25460 b246ad5123da9483da0587cbb72e8b1b 1131 Pfam PF09327 Domain of unknown function (DUF1983) 846 925 2.5E-24 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 APECO1_RS25460 b246ad5123da9483da0587cbb72e8b1b 1131 PANTHER PTHR36251 1 1106 0.0 T 22-04-2016 APECO1_RS25460 b246ad5123da9483da0587cbb72e8b1b 1131 Pfam PF12421 Fibronectin type III protein 949 1089 8.6E-40 T 22-04-2016 IPR021034 Domain of unknown function, DUF3672 APECO1_RS25460 b246ad5123da9483da0587cbb72e8b1b 1131 SUPERFAMILY SSF49265 617 719 7.22E-6 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APECO1_RS25460 b246ad5123da9483da0587cbb72e8b1b 1131 Pfam PF13550 Putative phage tail protein 330 495 1.7E-40 T 22-04-2016 IPR032876 Tip attachment protein J APECO1_RS25460 b246ad5123da9483da0587cbb72e8b1b 1131 PANTHER PTHR36251:SF2 1 1106 0.0 T 22-04-2016 APECO1_RS21770 c063a5506f032f67a8289ed98aec0709 340 PANTHER PTHR11614:SF100 11 340 4.9E-176 T 22-04-2016 APECO1_RS21770 c063a5506f032f67a8289ed98aec0709 340 Pfam PF12146 Serine aminopeptidase, S33 52 312 1.8E-57 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 APECO1_RS21770 c063a5506f032f67a8289ed98aec0709 340 SUPERFAMILY SSF53474 17 329 1.39E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS21770 c063a5506f032f67a8289ed98aec0709 340 PANTHER PTHR11614 11 340 4.9E-176 T 22-04-2016 APECO1_RS21770 c063a5506f032f67a8289ed98aec0709 340 Gene3D G3DSA:3.40.50.1820 29 329 5.3E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS05900 9de00721a566c8946b94b0bd14e6ad55 64 Pfam PF05810 NinF protein 1 22 3.1E-6 T 22-04-2016 IPR008712 NinF APECO1_RS17655 829ccc807bb107b78bc485e05956cfac 140 PANTHER PTHR38774 1 140 1.5E-61 T 22-04-2016 APECO1_RS17655 829ccc807bb107b78bc485e05956cfac 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 8.4E-43 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 APECO1_RS17655 829ccc807bb107b78bc485e05956cfac 140 PANTHER PTHR38774:SF1 1 140 1.5E-61 T 22-04-2016 APECO1_RS20950 fa7632294f1f5792212773b834a44ccc 272 Pfam PF03180 NLPA lipoprotein 34 272 3.6E-93 T 22-04-2016 IPR004872 Lipoprotein NlpA family APECO1_RS20950 fa7632294f1f5792212773b834a44ccc 272 PANTHER PTHR30429 3 272 2.5E-141 T 22-04-2016 IPR004872 Lipoprotein NlpA family APECO1_RS20950 fa7632294f1f5792212773b834a44ccc 272 Gene3D G3DSA:3.40.190.10 31 162 1.7E-54 T 22-04-2016 APECO1_RS20950 fa7632294f1f5792212773b834a44ccc 272 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 272 3.6E-149 T 22-04-2016 IPR004872 Lipoprotein NlpA family APECO1_RS20950 fa7632294f1f5792212773b834a44ccc 272 SUPERFAMILY SSF53850 34 272 8.15E-77 T 22-04-2016 APECO1_RS20950 fa7632294f1f5792212773b834a44ccc 272 PANTHER PTHR30429:SF1 3 272 2.5E-141 T 22-04-2016 APECO1_RS20950 fa7632294f1f5792212773b834a44ccc 272 PIRSF PIRSF002854 1 272 3.9E-96 T 22-04-2016 IPR004872 Lipoprotein NlpA family APECO1_RS16670 32a3ada6b16c12c45827045566310c13 83 Pfam PF10885 Protein of unknown function (DUF2684) 3 79 3.2E-23 T 22-04-2016 IPR020263 Uncharacterised protein family YqgD APECO1_RS16670 32a3ada6b16c12c45827045566310c13 83 ProDom PD060540 YQGD INNER MEMBRANE ECS3817 1 83 6.0E-43 T 22-04-2016 IPR020263 Uncharacterised protein family YqgD APECO1_RS06025 fd81b36199be23388a51d5dd6871b1b6 140 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 1 135 2.3E-63 T 22-04-2016 IPR010027 Bacteriophage lambda, GpG, minor tail APECO1_RS06025 fd81b36199be23388a51d5dd6871b1b6 140 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 1 125 1.1E-57 T 22-04-2016 IPR010027 Bacteriophage lambda, GpG, minor tail APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 Gene3D G3DSA:3.30.1120.10 423 533 8.8E-7 T 22-04-2016 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 PANTHER PTHR10342:SF199 214 558 4.2E-138 T 22-04-2016 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 PANTHER PTHR10342:SF199 99 186 4.2E-138 T 22-04-2016 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 PANTHER PTHR10342:SF199 56 71 4.2E-138 T 22-04-2016 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 PANTHER PTHR10342:SF199 7 32 4.2E-138 T 22-04-2016 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 ProSitePatterns PS00523 Sulfatases signature 1. 130 142 - T 22-04-2016 IPR024607 Sulfatase, conserved site APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 ProSitePatterns PS00149 Sulfatases signature 2. 175 185 - T 22-04-2016 IPR024607 Sulfatase, conserved site APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 Pfam PF00884 Sulfatase 58 408 1.4E-101 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 Gene3D G3DSA:3.40.720.10 56 422 4.5E-97 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 PANTHER PTHR10342 214 558 4.2E-138 T 22-04-2016 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 PANTHER PTHR10342 99 186 4.2E-138 T 22-04-2016 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 PANTHER PTHR10342 56 71 4.2E-138 T 22-04-2016 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 PANTHER PTHR10342 7 32 4.2E-138 T 22-04-2016 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 SUPERFAMILY SSF53649 481 535 6.83E-99 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 SUPERFAMILY SSF53649 57 82 6.83E-99 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS08260 1075c9ed37da39789755d1faaadf79c6 560 SUPERFAMILY SSF53649 109 445 6.83E-99 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 Pfam PF13091 PLD-like domain 332 446 2.2E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 Pfam PF13091 PLD-like domain 134 248 1.6E-11 T 22-04-2016 IPR025202 Phospholipase D-like domain APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 SMART SM00155 399 426 8.2E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 SMART SM00155 219 246 2.1E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 PANTHER PTHR21248 18 486 5.8E-304 T 22-04-2016 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 2.2E-6 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 Gene3D G3DSA:3.30.870.10 317 460 3.8E-35 T 22-04-2016 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 Gene3D G3DSA:3.30.870.10 111 316 2.9E-33 T 22-04-2016 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.264 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 5.4E-228 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 PANTHER PTHR21248:SF9 18 486 5.8E-304 T 22-04-2016 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 SUPERFAMILY SSF56024 273 473 9.42E-48 T 22-04-2016 APECO1_RS06610 6697711c6e912f9ee4c02921c93f6914 486 SUPERFAMILY SSF56024 66 315 4.08E-45 T 22-04-2016 APECO1_RS24260 359f034d49a15f06bd355b17c624892c 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 1.6E-125 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APECO1_RS24260 359f034d49a15f06bd355b17c624892c 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.757 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APECO1_RS24260 359f034d49a15f06bd355b17c624892c 316 Pfam PF01715 IPP transferase 46 290 3.0E-85 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APECO1_RS24260 359f034d49a15f06bd355b17c624892c 316 PANTHER PTHR11088 1 302 4.5E-125 T 22-04-2016 APECO1_RS24260 359f034d49a15f06bd355b17c624892c 316 Gene3D G3DSA:3.40.50.300 10 178 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS24260 359f034d49a15f06bd355b17c624892c 316 Gene3D G3DSA:1.10.287.890 207 289 6.8E-35 T 22-04-2016 APECO1_RS24260 359f034d49a15f06bd355b17c624892c 316 SUPERFAMILY SSF52540 13 157 9.81E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05670 2da4f50be2cee1134a6ff6ffaa0c724f 264 PANTHER PTHR30222:SF6 1 259 2.6E-168 T 22-04-2016 APECO1_RS05670 2da4f50be2cee1134a6ff6ffaa0c724f 264 SUPERFAMILY SSF161098 3 254 5.98E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS05670 2da4f50be2cee1134a6ff6ffaa0c724f 264 Gene3D G3DSA:1.10.3720.10 5 256 4.7E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS05670 2da4f50be2cee1134a6ff6ffaa0c724f 264 PANTHER PTHR30222 1 259 2.6E-168 T 22-04-2016 APECO1_RS05670 2da4f50be2cee1134a6ff6ffaa0c724f 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 253 6.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS24315 1a57bb4e9510d192b7cfdbeb63f0fd04 232 PANTHER PTHR31088 2 232 4.9E-51 T 22-04-2016 APECO1_RS24315 1a57bb4e9510d192b7cfdbeb63f0fd04 232 Pfam PF04012 PspA/IM30 family 2 232 3.3E-57 T 22-04-2016 IPR007157 PspA/IM30 APECO1_RS24315 1a57bb4e9510d192b7cfdbeb63f0fd04 232 PANTHER PTHR31088:SF0 2 232 4.9E-51 T 22-04-2016 APECO1_RS22740 951984a24105ceca351709a149fd5e19 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.446 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22740 951984a24105ceca351709a149fd5e19 121 SUPERFAMILY SSF54736 50 121 3.49E-25 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APECO1_RS22740 951984a24105ceca351709a149fd5e19 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 8.4E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22740 951984a24105ceca351709a149fd5e19 121 SUPERFAMILY SSF48300 3 57 5.62E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22740 951984a24105ceca351709a149fd5e19 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 4.6E-15 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS22740 951984a24105ceca351709a149fd5e19 121 Gene3D G3DSA:1.20.5.710 2 50 1.5E-22 T 22-04-2016 APECO1_RS22740 951984a24105ceca351709a149fd5e19 121 Gene3D G3DSA:3.30.1390.10 51 121 5.7E-34 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APECO1_RS22740 951984a24105ceca351709a149fd5e19 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 100 4.0E-17 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APECO1_RS22740 951984a24105ceca351709a149fd5e19 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 6.0E-31 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APECO1_RS15120 4e562b1d297294bb361ef521771122ab 390 PANTHER PTHR30349 22 376 2.1E-34 T 22-04-2016 APECO1_RS15120 4e562b1d297294bb361ef521771122ab 390 Pfam PF12167 Domain of unknown function (DUF3596) 10 77 4.2E-24 T 22-04-2016 IPR022000 Domain of unknown function (DUF3596) APECO1_RS15120 4e562b1d297294bb361ef521771122ab 390 PANTHER PTHR30349:SF36 22 376 2.1E-34 T 22-04-2016 APECO1_RS15120 4e562b1d297294bb361ef521771122ab 390 Gene3D G3DSA:1.10.443.10 200 376 3.5E-32 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS15120 4e562b1d297294bb361ef521771122ab 390 SUPERFAMILY SSF56349 91 376 7.36E-50 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS15120 4e562b1d297294bb361ef521771122ab 390 Gene3D G3DSA:1.10.150.130 91 184 8.1E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS15120 4e562b1d297294bb361ef521771122ab 390 Pfam PF00589 Phage integrase family 202 372 2.6E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS04035 c46426c216e7cf06b47dab106a168a78 306 Gene3D G3DSA:1.10.3720.10 88 301 3.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04035 c46426c216e7cf06b47dab106a168a78 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 4.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04035 c46426c216e7cf06b47dab106a168a78 306 SUPERFAMILY SSF161098 91 288 3.79E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04035 c46426c216e7cf06b47dab106a168a78 306 PANTHER PTHR30465:SF59 1 305 3.6E-208 T 22-04-2016 APECO1_RS04035 c46426c216e7cf06b47dab106a168a78 306 PANTHER PTHR30465 1 305 3.6E-208 T 22-04-2016 APECO1_RS02465 b02d2e5a5168bd100b6a7b8cb135c5eb 100 SUPERFAMILY SSF143011 9 98 1.57E-14 T 22-04-2016 APECO1_RS02465 b02d2e5a5168bd100b6a7b8cb135c5eb 100 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 9 98 5.9E-29 T 22-04-2016 IPR007711 Toxin HigB-1 APECO1_RS02465 b02d2e5a5168bd100b6a7b8cb135c5eb 100 PANTHER PTHR40266:SF1 6 100 4.6E-37 T 22-04-2016 APECO1_RS02465 b02d2e5a5168bd100b6a7b8cb135c5eb 100 PANTHER PTHR40266 6 100 4.6E-37 T 22-04-2016 APECO1_RS00230 38b4db6538bce110ff050407026631c8 504 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 501 1.0E-168 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APECO1_RS00230 38b4db6538bce110ff050407026631c8 504 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS00230 38b4db6538bce110ff050407026631c8 504 PANTHER PTHR30047 1 504 0.0 T 22-04-2016 APECO1_RS00230 38b4db6538bce110ff050407026631c8 504 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 500 2.3E-127 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APECO1_RS00230 38b4db6538bce110ff050407026631c8 504 Hamap MF_01049 L-carnitine/gamma-butyrobetaine antiporter [caiT]. 1 504 63.245 T 22-04-2016 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT GO:0016020|GO:0044667|GO:1900749|GO:1900751 UniPathway: UPA00117 APECO1_RS00230 38b4db6538bce110ff050407026631c8 504 PANTHER PTHR30047:SF4 1 504 0.0 T 22-04-2016 APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 PANTHER PTHR11751:SF389 9 113 6.1E-49 T 22-04-2016 APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 SUPERFAMILY SSF46785 2 77 6.13E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 Gene3D G3DSA:1.10.10.10 6 76 9.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.9E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.9E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 3.8E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 SMART SM00345 14 73 9.6E-26 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 SUPERFAMILY SSF48008 95 234 3.66E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 PANTHER PTHR11751 9 113 6.1E-49 T 22-04-2016 APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 Gene3D G3DSA:1.20.120.530 94 234 3.0E-32 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 Pfam PF07729 FCD domain 97 225 2.2E-20 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS24890 9ed6052024a3e099877d4d3a00edf922 257 SMART SM00895 97 226 6.3E-22 T 22-04-2016 IPR011711 GntR, C-terminal APECO1_RS14205 20700f439a8e0aacf794b91b94bc3572 216 Pfam PF05063 MT-A70 5 176 1.2E-20 T 22-04-2016 IPR007757 MT-A70-like GO:0006139|GO:0008168 APECO1_RS14205 20700f439a8e0aacf794b91b94bc3572 216 SUPERFAMILY SSF53335 4 153 1.13E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06940 2a821b992db4159e69d26bd889293e13 194 PANTHER PTHR34413 1 194 1.2E-68 T 22-04-2016 APECO1_RS06940 2a821b992db4159e69d26bd889293e13 194 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 72 191 5.0E-40 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly APECO1_RS20730 0131b92fe93a5fef9c59e8e31be11904 230 Pfam PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) 1 229 1.5E-129 T 22-04-2016 IPR009330 Lipopolysaccharide core heptose(II) kinase KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.-|UniPathway: UPA00958 APECO1_RS20730 0131b92fe93a5fef9c59e8e31be11904 230 SUPERFAMILY SSF56112 32 179 6.89E-9 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Pfam PF01556 DnaJ C terminal domain 120 276 4.8E-34 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Hamap MF_01154 Curved DNA-binding protein [cbpA]. 1 306 57.353 T 22-04-2016 IPR023859 DNA-binding protein, curved-DNA APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 22-04-2016 IPR018253 DnaJ domain, conserved site APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Pfam PF00226 DnaJ domain 5 66 1.9E-23 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 SMART SM00271 4 61 3.0E-26 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 SUPERFAMILY SSF49493 204 284 1.22E-17 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Gene3D G3DSA:1.10.287.110 2 105 1.9E-28 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Gene3D G3DSA:2.60.260.20 110 199 2.5E-16 T 22-04-2016 APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 Gene3D G3DSA:2.60.260.20 201 276 2.9E-17 T 22-04-2016 APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 SUPERFAMILY SSF49493 115 210 1.7E-15 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PRINTS PR00625 DnaJ domain signature 7 25 2.4E-17 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PRINTS PR00625 DnaJ domain signature 61 80 2.4E-17 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PRINTS PR00625 DnaJ domain signature 25 40 2.4E-17 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PRINTS PR00625 DnaJ domain signature 41 61 2.4E-17 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PANTHER PTHR24078:SF190 4 301 1.6E-72 T 22-04-2016 APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 SUPERFAMILY SSF46565 1 93 2.36E-27 T 22-04-2016 IPR001623 DnaJ domain APECO1_RS05060 b9eb262e179bd9c2b2cf28a70ce95a8a 306 PANTHER PTHR24078 4 301 1.6E-72 T 22-04-2016 APECO1_RS16975 885f203651a58b8da1b6b0da9d87b84d 410 Pfam PF11922 Domain of unknown function (DUF3440) 359 390 1.1E-7 T 22-04-2016 IPR021845 Protein of unknown function DUF3440 APECO1_RS16975 885f203651a58b8da1b6b0da9d87b84d 410 Pfam PF11922 Domain of unknown function (DUF3440) 242 345 3.1E-28 T 22-04-2016 IPR021845 Protein of unknown function DUF3440 APECO1_RS16975 885f203651a58b8da1b6b0da9d87b84d 410 SUPERFAMILY SSF52402 10 237 8.82E-42 T 22-04-2016 APECO1_RS16975 885f203651a58b8da1b6b0da9d87b84d 410 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 35 89 6.8E-7 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APECO1_RS16975 885f203651a58b8da1b6b0da9d87b84d 410 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 165 240 1.8E-7 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APECO1_RS16975 885f203651a58b8da1b6b0da9d87b84d 410 PANTHER PTHR30083:SF0 6 410 3.7E-166 T 22-04-2016 APECO1_RS16975 885f203651a58b8da1b6b0da9d87b84d 410 PANTHER PTHR30083 6 410 3.7E-166 T 22-04-2016 APECO1_RS16975 885f203651a58b8da1b6b0da9d87b84d 410 Gene3D G3DSA:3.40.50.620 18 240 1.3E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS23085 77a2214441d4e8ddc38f8977d64de29c 69 PIRSF PIRSF039008 1 66 5.1E-32 T 22-04-2016 IPR026042 Stress response protein YjbJ APECO1_RS23085 77a2214441d4e8ddc38f8977d64de29c 69 PANTHER PTHR34977 1 69 9.7E-19 T 22-04-2016 APECO1_RS23085 77a2214441d4e8ddc38f8977d64de29c 69 Pfam PF05532 CsbD-like 4 56 8.0E-22 T 22-04-2016 IPR008462 CsbD-like APECO1_RS23085 77a2214441d4e8ddc38f8977d64de29c 69 SUPERFAMILY SSF69047 1 69 7.45E-28 T 22-04-2016 IPR008462 CsbD-like APECO1_RS23085 77a2214441d4e8ddc38f8977d64de29c 69 Gene3D G3DSA:1.10.1470.10 1 68 6.7E-33 T 22-04-2016 IPR008462 CsbD-like APECO1_RS16460 200b6a6297fbd94fdd67021c2a1a87cf 103 PANTHER PTHR38088:SF2 2 103 2.5E-68 T 22-04-2016 APECO1_RS16460 200b6a6297fbd94fdd67021c2a1a87cf 103 SUPERFAMILY SSF88697 1 102 6.34E-34 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS16460 200b6a6297fbd94fdd67021c2a1a87cf 103 Gene3D G3DSA:2.30.130.30 1 102 8.7E-50 T 22-04-2016 APECO1_RS16460 200b6a6297fbd94fdd67021c2a1a87cf 103 PIRSF PIRSF029143 1 103 2.6E-51 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 APECO1_RS16460 200b6a6297fbd94fdd67021c2a1a87cf 103 PANTHER PTHR38088 2 103 2.5E-68 T 22-04-2016 APECO1_RS16460 200b6a6297fbd94fdd67021c2a1a87cf 103 Pfam PF04266 ASCH domain 6 101 7.0E-16 T 22-04-2016 IPR007374 ASCH domain APECO1_RS16460 200b6a6297fbd94fdd67021c2a1a87cf 103 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 32.098 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 APECO1_RS16460 200b6a6297fbd94fdd67021c2a1a87cf 103 SMART SM01022 6 102 4.4E-27 T 22-04-2016 IPR007374 ASCH domain APECO1_RS07905 89871e8c94d958e474e0d09d20fb9608 87 Pfam PF01848 Hok/gef family 55 84 1.7E-10 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS07905 89871e8c94d958e474e0d09d20fb9608 87 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 55 87 6.0E-11 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS24940 126ac7bf4df738723435bc2da129ac8e 513 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 504 4.7E-115 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APECO1_RS24940 126ac7bf4df738723435bc2da129ac8e 513 PANTHER PTHR30047 11 511 1.9E-101 T 22-04-2016 APECO1_RS20260 ea91da8b41e534bd02a10fe9c06308c6 519 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 157 471 1.7E-125 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE APECO1_RS20260 ea91da8b41e534bd02a10fe9c06308c6 519 Pfam PF10995 GGDEF I-site like or GIL domain 161 470 6.7E-122 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 SUPERFAMILY SSF51556 54 379 1.83E-100 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 TIGRFAM TIGR03178 allantoinase: allantoinase 4 449 3.8E-204 T 22-04-2016 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698|UniPathway: UPA00395 APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 Gene3D G3DSA:3.20.20.140 68 398 4.0E-117 T 22-04-2016 APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 PANTHER PTHR11647:SF4 1 452 1.8E-188 T 22-04-2016 APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 SUPERFAMILY SSF51338 378 448 1.15E-29 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 SUPERFAMILY SSF51338 3 53 1.15E-29 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 Hamap MF_01645 Allantoinase [allB]. 2 450 53.936 T 22-04-2016 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698|UniPathway: UPA00395 APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 Pfam PF01979 Amidohydrolase family 50 431 7.0E-22 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 Gene3D G3DSA:2.30.40.10 4 67 1.5E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS02600 1e50cc2d7d20cbac7a7c0c493800f0b9 453 PANTHER PTHR11647 1 452 1.8E-188 T 22-04-2016 APECO1_RS13950 24b0e2bb0d280576b46de3ecb589e8c0 171 Pfam PF05433 Glycine zipper 2TM domain 72 113 7.2E-8 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APECO1_RS13950 24b0e2bb0d280576b46de3ecb589e8c0 171 PANTHER PTHR35603 2 167 7.0E-69 T 22-04-2016 APECO1_RS13950 24b0e2bb0d280576b46de3ecb589e8c0 171 PANTHER PTHR35603:SF1 2 167 7.0E-69 T 22-04-2016 APECO1_RS11285 dda7863e957d6e311384645c8868c882 354 Pfam PF00534 Glycosyl transferases group 1 183 305 5.7E-8 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APECO1_RS11285 dda7863e957d6e311384645c8868c882 354 SUPERFAMILY SSF53756 4 354 1.82E-30 T 22-04-2016 APECO1_RS11285 dda7863e957d6e311384645c8868c882 354 Pfam PF09314 Domain of unknown function (DUF1972) 1 173 8.1E-35 T 22-04-2016 IPR015393 Domain of unknown function DUF1972 APECO1_RS20255 77e673648253e578993b884895bff75a 62 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 1 62 2.0E-29 T 22-04-2016 IPR024487 Cellulose biosynthesis protein BcsR APECO1_RS20255 77e673648253e578993b884895bff75a 62 Pfam PF10945 Cellulose biosynthesis protein BcsR 18 59 2.0E-22 T 22-04-2016 IPR024487 Cellulose biosynthesis protein BcsR APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 236 7.3E-30 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 87 262 6.2E-68 T 22-04-2016 IPR008090 Ferric iron reductase APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 PRINTS PR01714 Ferric iron reductase signature 56 73 2.94E-75 T 22-04-2016 IPR008090 Ferric iron reductase APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 PRINTS PR01714 Ferric iron reductase signature 241 259 2.94E-75 T 22-04-2016 IPR008090 Ferric iron reductase APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 PRINTS PR01714 Ferric iron reductase signature 16 32 2.94E-75 T 22-04-2016 IPR008090 Ferric iron reductase APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 PRINTS PR01714 Ferric iron reductase signature 215 231 2.94E-75 T 22-04-2016 IPR008090 Ferric iron reductase APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 PRINTS PR01714 Ferric iron reductase signature 125 139 2.94E-75 T 22-04-2016 IPR008090 Ferric iron reductase APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 PRINTS PR01714 Ferric iron reductase signature 93 108 2.94E-75 T 22-04-2016 IPR008090 Ferric iron reductase APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 PRINTS PR01714 Ferric iron reductase signature 197 212 2.94E-75 T 22-04-2016 IPR008090 Ferric iron reductase APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 PRINTS PR01714 Ferric iron reductase signature 173 189 2.94E-75 T 22-04-2016 IPR008090 Ferric iron reductase APECO1_RS25170 203eea43c7b4d87fb6ea3f27052955e7 262 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 2.7E-7 T 22-04-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 APECO1_RS17895 a66343ae1ae0ed0862055ecd995a3a4f 149 Pfam PF04074 Domain of unknown function (DUF386) 3 139 3.1E-24 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS17895 a66343ae1ae0ed0862055ecd995a3a4f 149 SUPERFAMILY SSF51197 3 142 2.28E-22 T 22-04-2016 APECO1_RS17895 a66343ae1ae0ed0862055ecd995a3a4f 149 Gene3D G3DSA:2.60.120.370 3 141 6.3E-17 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS12655 73900e087a77eefd73021c9b3abd0767 167 Pfam PF08974 Domain of unknown function (DUF1877) 1 163 1.3E-33 T 22-04-2016 IPR015068 Protein of unknown function DUF1877 APECO1_RS12655 73900e087a77eefd73021c9b3abd0767 167 SUPERFAMILY SSF111069 3 165 7.98E-56 T 22-04-2016 IPR015068 Protein of unknown function DUF1877 APECO1_RS12655 73900e087a77eefd73021c9b3abd0767 167 Gene3D G3DSA:3.40.1760.10 1 166 4.8E-50 T 22-04-2016 IPR015068 Protein of unknown function DUF1877 APECO1_RS09015 e378b2f9630646e60cb13ceed347e1e8 138 PANTHER PTHR12735:SF26 1 138 2.4E-67 T 22-04-2016 APECO1_RS09015 e378b2f9630646e60cb13ceed347e1e8 138 PANTHER PTHR12735 1 138 2.4E-67 T 22-04-2016 APECO1_RS09015 e378b2f9630646e60cb13ceed347e1e8 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 42.692 T 22-04-2016 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 UniPathway: UPA00266 APECO1_RS09015 e378b2f9630646e60cb13ceed347e1e8 138 Gene3D G3DSA:3.90.1010.10 1 137 1.0E-52 T 22-04-2016 APECO1_RS09015 e378b2f9630646e60cb13ceed347e1e8 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 1.0E-43 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 APECO1_RS09015 e378b2f9630646e60cb13ceed347e1e8 138 SUPERFAMILY SSF82649 3 136 3.03E-45 T 22-04-2016 APECO1_RS15760 7adc5d2ec0278b0b04f4ed3c68836718 382 PANTHER PTHR30373:SF2 318 382 8.0E-27 T 22-04-2016 APECO1_RS15760 7adc5d2ec0278b0b04f4ed3c68836718 382 PANTHER PTHR30373:SF2 23 272 8.0E-27 T 22-04-2016 APECO1_RS15760 7adc5d2ec0278b0b04f4ed3c68836718 382 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 23 149 1.2E-19 T 22-04-2016 IPR007621 TPM domain APECO1_RS15760 7adc5d2ec0278b0b04f4ed3c68836718 382 PANTHER PTHR30373 318 382 8.0E-27 T 22-04-2016 APECO1_RS15760 7adc5d2ec0278b0b04f4ed3c68836718 382 PANTHER PTHR30373 23 272 8.0E-27 T 22-04-2016 APECO1_RS15050 3991667e39967141d0d2c2aa7bbfdf36 108 SUPERFAMILY SSF46785 3 69 3.98E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS15050 3991667e39967141d0d2c2aa7bbfdf36 108 PANTHER PTHR33516 1 84 4.5E-17 T 22-04-2016 APECO1_RS15050 3991667e39967141d0d2c2aa7bbfdf36 108 PANTHER PTHR33516:SF2 1 84 4.5E-17 T 22-04-2016 APECO1_RS15050 3991667e39967141d0d2c2aa7bbfdf36 108 Pfam PF01726 LexA DNA binding domain 1 65 2.5E-19 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 APECO1_RS15050 3991667e39967141d0d2c2aa7bbfdf36 108 Gene3D G3DSA:1.10.10.10 1 68 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08950 1fc8f60a03b847a892da2bb1f4aafc41 316 PANTHER PTHR40254 235 303 6.1E-12 T 22-04-2016 APECO1_RS08950 1fc8f60a03b847a892da2bb1f4aafc41 316 PANTHER PTHR40254 4 215 6.1E-12 T 22-04-2016 APECO1_RS08950 1fc8f60a03b847a892da2bb1f4aafc41 316 Gene3D G3DSA:3.40.50.720 2 87 1.3E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08950 1fc8f60a03b847a892da2bb1f4aafc41 316 Gene3D G3DSA:3.40.50.720 136 215 1.3E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS08950 1fc8f60a03b847a892da2bb1f4aafc41 316 Pfam PF13454 FAD-NAD(P)-binding 5 164 2.2E-30 T 22-04-2016 APECO1_RS08950 1fc8f60a03b847a892da2bb1f4aafc41 316 SUPERFAMILY SSF51905 1 269 4.92E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS08950 1fc8f60a03b847a892da2bb1f4aafc41 316 PANTHER PTHR40254:SF1 235 303 6.1E-12 T 22-04-2016 APECO1_RS08950 1fc8f60a03b847a892da2bb1f4aafc41 316 PANTHER PTHR40254:SF1 4 215 6.1E-12 T 22-04-2016 APECO1_RS05605 2ae79839d4d9ea3deab78ca2f283bf01 210 SUPERFAMILY SSF46689 11 83 9.75E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS05605 2ae79839d4d9ea3deab78ca2f283bf01 210 PANTHER PTHR30055:SF34 10 209 3.2E-97 T 22-04-2016 APECO1_RS05605 2ae79839d4d9ea3deab78ca2f283bf01 210 Gene3D G3DSA:1.10.10.60 12 78 3.9E-25 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS05605 2ae79839d4d9ea3deab78ca2f283bf01 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 3.9E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS05605 2ae79839d4d9ea3deab78ca2f283bf01 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 3.9E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS05605 2ae79839d4d9ea3deab78ca2f283bf01 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 1.9E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS05605 2ae79839d4d9ea3deab78ca2f283bf01 210 PANTHER PTHR30055 10 209 3.2E-97 T 22-04-2016 APECO1_RS05605 2ae79839d4d9ea3deab78ca2f283bf01 210 Gene3D G3DSA:1.10.357.10 84 209 1.1E-42 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS05605 2ae79839d4d9ea3deab78ca2f283bf01 210 SUPERFAMILY SSF48498 92 206 6.53E-27 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS13185 78bf1037e1849622fc5735571387f491 96 Pfam PF07102 Protein of unknown function (DUF1364) 3 93 1.7E-43 T 22-04-2016 IPR010774 Protein of unknown function DUF1364 APECO1_RS13185 78bf1037e1849622fc5735571387f491 96 Gene3D G3DSA:3.30.50.20 19 93 2.4E-42 T 22-04-2016 APECO1_RS13355 c2afd5f2ff8daf79c9d21c642e524b1d 387 Pfam PF00529 HlyD membrane-fusion protein of T1SS 30 340 1.7E-16 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS13355 c2afd5f2ff8daf79c9d21c642e524b1d 387 Gene3D G3DSA:2.40.50.100 57 87 1.6E-16 T 22-04-2016 APECO1_RS13355 c2afd5f2ff8daf79c9d21c642e524b1d 387 Gene3D G3DSA:2.40.50.100 208 241 1.6E-16 T 22-04-2016 APECO1_RS13355 c2afd5f2ff8daf79c9d21c642e524b1d 387 SUPERFAMILY SSF111369 187 260 1.31E-9 T 22-04-2016 APECO1_RS13355 c2afd5f2ff8daf79c9d21c642e524b1d 387 SUPERFAMILY SSF111369 57 154 1.31E-9 T 22-04-2016 APECO1_RS13355 c2afd5f2ff8daf79c9d21c642e524b1d 387 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 14 338 5.2E-146 T 22-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 APECO1_RS13355 c2afd5f2ff8daf79c9d21c642e524b1d 387 PANTHER PTHR30386:SF6 1 369 2.2E-186 T 22-04-2016 APECO1_RS13355 c2afd5f2ff8daf79c9d21c642e524b1d 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 285 5.0E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS13355 c2afd5f2ff8daf79c9d21c642e524b1d 387 PANTHER PTHR30386 1 369 2.2E-186 T 22-04-2016 APECO1_RS09390 da1b378e32852e73288151cd92c4bf7f 235 PANTHER PTHR12677 1 235 1.4E-160 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 APECO1_RS09390 da1b378e32852e73288151cd92c4bf7f 235 PANTHER PTHR12677:SF20 1 235 1.4E-160 T 22-04-2016 APECO1_RS09390 da1b378e32852e73288151cd92c4bf7f 235 Pfam PF09335 SNARE associated Golgi protein 80 197 1.1E-24 T 22-04-2016 IPR032816 SNARE associated Golgi protein APECO1_RS09410 bf4ac5a34a37350d30a35509dee5d4a9 217 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS09410 bf4ac5a34a37350d30a35509dee5d4a9 217 SUPERFAMILY SSF52540 1 197 1.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09410 bf4ac5a34a37350d30a35509dee5d4a9 217 PANTHER PTHR24220 3 198 2.5E-135 T 22-04-2016 APECO1_RS09410 bf4ac5a34a37350d30a35509dee5d4a9 217 Gene3D G3DSA:3.40.50.300 1 197 6.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09410 bf4ac5a34a37350d30a35509dee5d4a9 217 PANTHER PTHR24220:SF485 3 198 2.5E-135 T 22-04-2016 APECO1_RS09410 bf4ac5a34a37350d30a35509dee5d4a9 217 Pfam PF00005 ABC transporter 17 161 7.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS09410 bf4ac5a34a37350d30a35509dee5d4a9 217 SMART SM00382 26 214 1.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS23425 d3aabd2bfef2d44bcfe52a4c266a95fb 296 PANTHER PTHR30514:SF1 12 282 1.9E-98 T 22-04-2016 APECO1_RS23425 d3aabd2bfef2d44bcfe52a4c266a95fb 296 Gene3D G3DSA:3.40.50.10490 110 277 6.1E-37 T 22-04-2016 APECO1_RS23425 d3aabd2bfef2d44bcfe52a4c266a95fb 296 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 90 1.1E-25 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APECO1_RS23425 d3aabd2bfef2d44bcfe52a4c266a95fb 296 Pfam PF01380 SIS domain 138 266 1.2E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS23425 d3aabd2bfef2d44bcfe52a4c266a95fb 296 SUPERFAMILY SSF46689 17 89 6.09E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23425 d3aabd2bfef2d44bcfe52a4c266a95fb 296 SUPERFAMILY SSF53697 104 288 1.7E-40 T 22-04-2016 APECO1_RS23425 d3aabd2bfef2d44bcfe52a4c266a95fb 296 PANTHER PTHR30514 12 282 1.9E-98 T 22-04-2016 APECO1_RS23425 d3aabd2bfef2d44bcfe52a4c266a95fb 296 Gene3D G3DSA:1.10.10.10 20 89 3.7E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS12665 9f6863314ea819221d2af8ba38c97b26 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 3.5E-70 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APECO1_RS12665 9f6863314ea819221d2af8ba38c97b26 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 3.6E-186 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 APECO1_RS12665 9f6863314ea819221d2af8ba38c97b26 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.1E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APECO1_RS12665 9f6863314ea819221d2af8ba38c97b26 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 1.1E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APECO1_RS12665 9f6863314ea819221d2af8ba38c97b26 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.1E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APECO1_RS12665 9f6863314ea819221d2af8ba38c97b26 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 1.1E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APECO1_RS12665 9f6863314ea819221d2af8ba38c97b26 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 1.1E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APECO1_RS12665 9f6863314ea819221d2af8ba38c97b26 509 PANTHER PTHR22773 1 509 9.7E-198 T 22-04-2016 APECO1_RS12665 9f6863314ea819221d2af8ba38c97b26 509 PANTHER PTHR22773:SF40 1 509 9.7E-198 T 22-04-2016 APECO1_RS15545 b3c729890faad9593c7fd065b2b127fe 114 Pfam PF11756 Nitrous oxide-stimulated promoter 4 106 8.9E-39 T 22-04-2016 IPR020483 Uncharacterised protein family YgbA APECO1_RS15545 b3c729890faad9593c7fd065b2b127fe 114 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 97 2.0E-51 T 22-04-2016 IPR020483 Uncharacterised protein family YgbA APECO1_RS22460 40d0fa7bd29ed26a4305da98b7646c09 386 PANTHER PTHR11808 1 385 2.3E-184 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APECO1_RS22460 40d0fa7bd29ed26a4305da98b7646c09 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APECO1_RS22460 40d0fa7bd29ed26a4305da98b7646c09 386 PIRSF PIRSF001434 1 384 5.6E-130 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APECO1_RS22460 40d0fa7bd29ed26a4305da98b7646c09 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 3.1E-141 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APECO1_RS22460 40d0fa7bd29ed26a4305da98b7646c09 386 PANTHER PTHR11808:SF15 1 385 2.3E-184 T 22-04-2016 APECO1_RS22460 40d0fa7bd29ed26a4305da98b7646c09 386 Gene3D G3DSA:3.40.640.10 5 246 4.7E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS22460 40d0fa7bd29ed26a4305da98b7646c09 386 Gene3D G3DSA:3.90.1150.10 250 383 1.7E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS22460 40d0fa7bd29ed26a4305da98b7646c09 386 SUPERFAMILY SSF53383 5 381 3.06E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS22460 40d0fa7bd29ed26a4305da98b7646c09 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 6.7E-212 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 APECO1_RS01905 0478ccc70dcedb351d0611a2730b68b5 207 SUPERFAMILY SSF51206 26 123 1.31E-6 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like APECO1_RS01905 0478ccc70dcedb351d0611a2730b68b5 207 Gene3D G3DSA:1.10.10.10 138 203 3.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01905 0478ccc70dcedb351d0611a2730b68b5 207 Pfam PF15977 Winged helix-turn-helix DNA binding 138 205 1.5E-29 T 22-04-2016 APECO1_RS13640 00a37121ffe14c72590d31ff3ecdcabc 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 3.2E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS13640 00a37121ffe14c72590d31ff3ecdcabc 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 4.7E-114 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 APECO1_RS13640 00a37121ffe14c72590d31ff3ecdcabc 277 SUPERFAMILY SSF161098 16 264 3.64E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS13640 00a37121ffe14c72590d31ff3ecdcabc 277 Gene3D G3DSA:1.10.3720.10 19 273 2.5E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS13640 00a37121ffe14c72590d31ff3ecdcabc 277 PANTHER PTHR30406 7 277 1.5E-212 T 22-04-2016 APECO1_RS13640 00a37121ffe14c72590d31ff3ecdcabc 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 269 8.5E-116 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APECO1_RS13640 00a37121ffe14c72590d31ff3ecdcabc 277 PANTHER PTHR30406:SF7 7 277 1.5E-212 T 22-04-2016 APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 68 88 2.5E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 214 232 2.5E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 195 212 2.5E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 33 47 2.5E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 237 257 2.5E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 PANTHER PTHR13370 5 283 2.7E-104 T 22-04-2016 APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 Pfam PF01555 DNA methylase 34 250 1.8E-53 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 Gene3D G3DSA:3.40.50.150 14 284 3.7E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 SUPERFAMILY SSF53335 16 257 1.5E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 37 43 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS18770 1b62938192205ec2fa6880625e1a05df 294 PANTHER PTHR13370:SF8 5 283 2.7E-104 T 22-04-2016 APECO1_RS20125 b06069eed9d51d080555c57448ff8e0a 190 PANTHER PTHR34989 1 188 3.8E-38 T 22-04-2016 APECO1_RS20125 b06069eed9d51d080555c57448ff8e0a 190 Pfam PF03729 Short repeat of unknown function (DUF308) 84 153 4.9E-8 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane APECO1_RS20125 b06069eed9d51d080555c57448ff8e0a 190 Pfam PF03729 Short repeat of unknown function (DUF308) 27 97 5.7E-12 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane APECO1_RS20125 b06069eed9d51d080555c57448ff8e0a 190 PANTHER PTHR34989:SF1 1 188 3.8E-38 T 22-04-2016 APECO1_RS25320 bda875381ac3ce7302cd08045906316f 70 PIRSF PIRSF002599 1 70 5.3E-11 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APECO1_RS25320 bda875381ac3ce7302cd08045906316f 70 Gene3D G3DSA:2.40.50.140 5 69 3.3E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS25320 bda875381ac3ce7302cd08045906316f 70 SUPERFAMILY SSF50249 5 68 3.18E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS25320 bda875381ac3ce7302cd08045906316f 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.9E-21 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS25320 bda875381ac3ce7302cd08045906316f 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site APECO1_RS25320 bda875381ac3ce7302cd08045906316f 70 PANTHER PTHR11544 1 67 4.9E-16 T 22-04-2016 APECO1_RS25320 bda875381ac3ce7302cd08045906316f 70 SMART SM00357 6 70 8.8E-11 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS00310 524c6893f8ac2107846e0c7a3d09f4b5 784 Gene3D G3DSA:2.60.450.10 47 209 2.9E-25 T 22-04-2016 APECO1_RS00310 524c6893f8ac2107846e0c7a3d09f4b5 784 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 763 21.382 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 APECO1_RS00310 524c6893f8ac2107846e0c7a3d09f4b5 784 Pfam PF04453 Organic solvent tolerance protein 309 697 5.8E-112 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 APECO1_RS00310 524c6893f8ac2107846e0c7a3d09f4b5 784 PANTHER PTHR30189 1 782 6.7E-132 T 22-04-2016 APECO1_RS00310 524c6893f8ac2107846e0c7a3d09f4b5 784 Pfam PF03968 OstA-like protein 53 194 2.1E-28 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal APECO1_RS11110 cb2193bce20ce5d2725b73c8e87f44c5 356 SUPERFAMILY SSF52151 4 80 2.44E-34 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APECO1_RS11110 cb2193bce20ce5d2725b73c8e87f44c5 356 SUPERFAMILY SSF52151 123 273 2.44E-34 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APECO1_RS11110 cb2193bce20ce5d2725b73c8e87f44c5 356 Pfam PF01734 Patatin-like phospholipase 9 238 3.4E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APECO1_RS11110 cb2193bce20ce5d2725b73c8e87f44c5 356 PANTHER PTHR14226 141 251 2.8E-19 T 22-04-2016 APECO1_RS11110 cb2193bce20ce5d2725b73c8e87f44c5 356 PANTHER PTHR14226 5 95 2.8E-19 T 22-04-2016 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 PANTHER PTHR10314 1 369 1.0E-200 T 22-04-2016 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 SUPERFAMILY SSF55021 337 424 2.75E-28 T 22-04-2016 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 6.7E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 Gene3D G3DSA:3.40.1020.10 340 513 4.1E-57 T 22-04-2016 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 513 2.7E-270 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 SUPERFAMILY SSF53686 15 366 2.62E-101 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 SUPERFAMILY SSF55021 421 513 6.87E-26 T 22-04-2016 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 Gene3D G3DSA:3.40.50.1100 82 334 2.4E-78 T 22-04-2016 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 PANTHER PTHR10314:SF30 1 369 1.0E-200 T 22-04-2016 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 426 513 3.3E-27 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APECO1_RS21490 43ce0d95eca2ecef965a3310d2a01344 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 2.7E-29 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APECO1_RS21765 38795d3facf63047ab028f62d0851ef1 206 PANTHER PTHR30086:SF14 1 206 3.5E-119 T 22-04-2016 APECO1_RS21765 38795d3facf63047ab028f62d0851ef1 206 PANTHER PTHR30086 1 206 3.5E-119 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS21765 38795d3facf63047ab028f62d0851ef1 206 Pfam PF01810 LysE type translocator 14 202 7.1E-51 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS21765 38795d3facf63047ab028f62d0851ef1 206 PIRSF PIRSF006324 1 205 3.4E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS21765 38795d3facf63047ab028f62d0851ef1 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 3.6E-61 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 APECO1_RS02830 b1020bb91af808ff38c7fa9b0ff610be 60 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 43 60 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APECO1_RS02830 b1020bb91af808ff38c7fa9b0ff610be 60 SUPERFAMILY SSF56935 2 60 6.41E-9 T 22-04-2016 APECO1_RS02830 b1020bb91af808ff38c7fa9b0ff610be 60 Pfam PF00593 TonB dependent receptor 1 58 2.3E-6 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS02830 b1020bb91af808ff38c7fa9b0ff610be 60 Gene3D G3DSA:2.40.170.20 1 60 1.3E-13 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 PANTHER PTHR30419 2 312 2.1E-173 T 22-04-2016 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 Gene3D G3DSA:3.40.190.10 198 267 1.7E-7 T 22-04-2016 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 6.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 PANTHER PTHR30419:SF7 2 312 2.1E-173 T 22-04-2016 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 Pfam PF03466 LysR substrate binding domain 98 296 1.7E-31 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 Gene3D G3DSA:1.10.10.10 8 93 1.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 9.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 9.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 SUPERFAMILY SSF53850 99 298 1.03E-29 T 22-04-2016 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 Gene3D G3DSA:3.40.190.10 99 197 3.9E-20 T 22-04-2016 APECO1_RS18075 7aa069e15cdb9b579fed4d5838632d21 312 SUPERFAMILY SSF46785 8 112 8.08E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS14175 04c559ef461f0658596d64e3b4d4e5f6 194 Gene3D G3DSA:1.10.260.40 21 67 1.1E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS14175 04c559ef461f0658596d64e3b4d4e5f6 194 Pfam PF00356 Bacterial regulatory proteins, lacI family 112 148 3.6E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS14175 04c559ef461f0658596d64e3b4d4e5f6 194 Gene3D G3DSA:1.10.260.40 102 151 2.4E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS14175 04c559ef461f0658596d64e3b4d4e5f6 194 SMART SM00530 3 67 36.0 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS14175 04c559ef461f0658596d64e3b4d4e5f6 194 SMART SM00530 93 150 0.012 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS14175 04c559ef461f0658596d64e3b4d4e5f6 194 SUPERFAMILY SSF47413 99 156 1.45E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS11070 18f7d067a69b5b390b1d17ba6f158159 283 Pfam PF00665 Integrase core domain 119 234 8.8E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APECO1_RS11070 18f7d067a69b5b390b1d17ba6f158159 283 SUPERFAMILY SSF53098 114 273 2.88E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS11070 18f7d067a69b5b390b1d17ba6f158159 283 Gene3D G3DSA:3.30.420.10 113 271 5.1E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS11070 18f7d067a69b5b390b1d17ba6f158159 283 PANTHER PTHR32552 1 280 4.2E-83 T 22-04-2016 APECO1_RS11070 18f7d067a69b5b390b1d17ba6f158159 283 Pfam PF13276 HTH-like domain 43 96 6.2E-15 T 22-04-2016 IPR025948 HTH-like domain APECO1_RS21465 a4c4ff7d036b31794f438746bc460e3d 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 1.5E-17 T 22-04-2016 IPR012567 IlvGEDA operon leader peptide GO:0009082 APECO1_RS22215 9a4b8e3805732e83f0cee3cfa7f67c88 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 1.0E-157 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APECO1_RS22215 9a4b8e3805732e83f0cee3cfa7f67c88 309 PIRSF PIRSF018296 1 309 2.1E-136 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APECO1_RS22215 9a4b8e3805732e83f0cee3cfa7f67c88 309 PANTHER PTHR37689:SF1 4 309 1.4E-118 T 22-04-2016 APECO1_RS22215 9a4b8e3805732e83f0cee3cfa7f67c88 309 SUPERFAMILY SSF144020 24 306 1.44E-99 T 22-04-2016 IPR024064 FdhE-like APECO1_RS22215 9a4b8e3805732e83f0cee3cfa7f67c88 309 PANTHER PTHR37689 4 309 1.4E-118 T 22-04-2016 APECO1_RS22215 9a4b8e3805732e83f0cee3cfa7f67c88 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 50.309 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APECO1_RS22215 9a4b8e3805732e83f0cee3cfa7f67c88 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 304 6.4E-117 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APECO1_RS22215 9a4b8e3805732e83f0cee3cfa7f67c88 309 Gene3D G3DSA:3.90.1670.10 24 307 4.8E-112 T 22-04-2016 IPR024064 FdhE-like APECO1_RS10690 cc2e714fc2b7ae2a8c0dbe0953158204 229 Pfam PF06323 Phage antitermination protein Q 4 220 2.3E-85 T 22-04-2016 IPR010455 Bacteriophage 82, GpQ APECO1_RS10690 cc2e714fc2b7ae2a8c0dbe0953158204 229 PIRSF PIRSF004417 1 229 3.4E-120 T 22-04-2016 IPR010455 Bacteriophage 82, GpQ APECO1_RS10690 cc2e714fc2b7ae2a8c0dbe0953158204 229 ProDom PD038144 ANTITERMINATOR Q PROPHAGE TRANSCRIPTION ANTITERMINATION CP-933P GIFSY-1 ENCODED BY Q-LIKE 1 218 9.0E-113 T 22-04-2016 IPR010455 Bacteriophage 82, GpQ APECO1_RS10440 c22a9d9ba002d137005c268d4fcea1ea 305 Pfam PF05661 Protein of unknown function (DUF808) 6 291 1.3E-113 T 22-04-2016 IPR008526 Inner membrane protein YedI APECO1_RS10440 c22a9d9ba002d137005c268d4fcea1ea 305 PANTHER PTHR30503 4 303 1.5E-105 T 22-04-2016 APECO1_RS10440 c22a9d9ba002d137005c268d4fcea1ea 305 PIRSF PIRSF016660 3 305 1.2E-125 T 22-04-2016 IPR008526 Inner membrane protein YedI APECO1_RS04085 fc75888a032d59ad0ef8f5c7c9716233 198 PANTHER PTHR14969 1 193 2.0E-85 T 22-04-2016 APECO1_RS04085 fc75888a032d59ad0ef8f5c7c9716233 198 PANTHER PTHR14969:SF20 1 193 2.0E-85 T 22-04-2016 APECO1_RS04085 fc75888a032d59ad0ef8f5c7c9716233 198 Gene3D G3DSA:1.20.144.10 3 165 3.8E-27 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS04085 fc75888a032d59ad0ef8f5c7c9716233 198 SMART SM00014 57 165 6.0E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS04085 fc75888a032d59ad0ef8f5c7c9716233 198 SUPERFAMILY SSF48317 1 196 1.07E-42 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS04085 fc75888a032d59ad0ef8f5c7c9716233 198 Pfam PF01569 PAP2 superfamily 58 166 2.2E-13 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 PANTHER PTHR11938:SF64 1 189 2.2E-97 T 22-04-2016 APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.313 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 SUPERFAMILY SSF54862 38 174 6.35E-29 T 22-04-2016 APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 PANTHER PTHR11938 1 189 2.2E-97 T 22-04-2016 APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 1.3E-16 T 22-04-2016 APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 PIRSF PIRSF005784 3 191 1.8E-84 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 Pfam PF04060 Putative Fe-S cluster 44 76 1.4E-12 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 Gene3D G3DSA:3.30.70.20 111 177 7.2E-17 T 22-04-2016 APECO1_RS08740 9a365c20928856381eb798b792ecf2ad 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 191 1.7E-88 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 APECO1_RS06870 660af195d7388dd0a98f966e8159b506 177 Pfam PF06763 Prophage minor tail protein Z (GPZ) 3 177 5.6E-58 T 22-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APECO1_RS06870 660af195d7388dd0a98f966e8159b506 177 PIRSF PIRSF004395 1 177 2.0E-87 T 22-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APECO1_RS23400 856df1c4fa286aa2e6b9f7e5c1c13e9a 231 SUPERFAMILY SSF51366 1 214 5.65E-59 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS23400 856df1c4fa286aa2e6b9f7e5c1c13e9a 231 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 207 3.4E-65 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS23400 856df1c4fa286aa2e6b9f7e5c1c13e9a 231 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS23400 856df1c4fa286aa2e6b9f7e5c1c13e9a 231 Gene3D G3DSA:3.20.20.70 1 223 2.0E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS23400 856df1c4fa286aa2e6b9f7e5c1c13e9a 231 Pfam PF00834 Ribulose-phosphate 3 epimerase family 2 196 1.4E-62 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS23400 856df1c4fa286aa2e6b9f7e5c1c13e9a 231 PANTHER PTHR11749 1 223 1.9E-92 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS23400 856df1c4fa286aa2e6b9f7e5c1c13e9a 231 PANTHER PTHR11749:SF3 1 223 1.9E-92 T 22-04-2016 APECO1_RS23400 856df1c4fa286aa2e6b9f7e5c1c13e9a 231 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 29 43 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 Pfam PF01300 Telomere recombination 210 373 2.1E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 Gene3D G3DSA:3.30.70.100 3 91 4.9E-28 T 22-04-2016 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 PIRSF PIRSF006256 4 748 4.5E-278 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 SUPERFAMILY SSF55821 175 379 1.16E-44 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 PANTHER PTHR10029:SF4 9 747 0.0 T 22-04-2016 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 Gene3D G3DSA:3.90.870.10 197 369 6.3E-45 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 Pfam PF07503 HypF finger 108 141 2.0E-15 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 Pfam PF07503 HypF finger 158 191 1.5E-15 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 Pfam PF00708 Acylphosphatase 9 91 1.4E-17 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 738 0.0 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 PANTHER PTHR10029 9 747 0.0 T 22-04-2016 APECO1_RS15435 2eee53b7d6d296259acb6280052b1864 750 SUPERFAMILY SSF54975 8 91 8.29E-21 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APECO1_RS13730 507957d12d80ed6d8d1845a64cfd1e2c 395 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 278 298 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS13730 507957d12d80ed6d8d1845a64cfd1e2c 395 PANTHER PTHR11496 1 394 0.0 T 22-04-2016 APECO1_RS13730 507957d12d80ed6d8d1845a64cfd1e2c 395 PANTHER PTHR11496:SF72 1 394 0.0 T 22-04-2016 APECO1_RS13730 507957d12d80ed6d8d1845a64cfd1e2c 395 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 191 219 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APECO1_RS13730 507957d12d80ed6d8d1845a64cfd1e2c 395 SUPERFAMILY SSF56796 22 393 4.97E-114 T 22-04-2016 APECO1_RS13730 507957d12d80ed6d8d1845a64cfd1e2c 395 Gene3D G3DSA:3.40.50.1970 22 202 1.5E-52 T 22-04-2016 APECO1_RS13730 507957d12d80ed6d8d1845a64cfd1e2c 395 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 387 1.4E-112 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APECO1_RS13730 507957d12d80ed6d8d1845a64cfd1e2c 395 Gene3D G3DSA:1.20.1090.10 203 394 1.1E-64 T 22-04-2016 APECO1_RS15310 a746a4ecdb86eba0ab3b8e672a3be303 142 Pfam PF09335 SNARE associated Golgi protein 26 131 4.7E-10 T 22-04-2016 IPR032816 SNARE associated Golgi protein APECO1_RS15310 a746a4ecdb86eba0ab3b8e672a3be303 142 PANTHER PTHR30353:SF12 4 141 4.9E-61 T 22-04-2016 APECO1_RS15310 a746a4ecdb86eba0ab3b8e672a3be303 142 PANTHER PTHR30353 4 141 4.9E-61 T 22-04-2016 IPR032818 DedA family APECO1_RS03440 e35b4871cdd808926cfcd9390cd61521 244 PANTHER PTHR30292 1 244 1.6E-128 T 22-04-2016 APECO1_RS03440 e35b4871cdd808926cfcd9390cd61521 244 Pfam PF03746 LamB/YcsF family 3 235 3.0E-92 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF APECO1_RS03440 e35b4871cdd808926cfcd9390cd61521 244 PANTHER PTHR30292:SF0 1 244 1.6E-128 T 22-04-2016 APECO1_RS03440 e35b4871cdd808926cfcd9390cd61521 244 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.169 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF APECO1_RS03440 e35b4871cdd808926cfcd9390cd61521 244 SUPERFAMILY SSF88713 1 242 8.15E-91 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APECO1_RS15885 f11dac33a3e3fcced974d374e62f55ac 438 Gene3D G3DSA:1.20.1250.20 28 233 5.1E-19 T 22-04-2016 APECO1_RS15885 f11dac33a3e3fcced974d374e62f55ac 438 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 24 432 1.1E-204 T 22-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 APECO1_RS15885 f11dac33a3e3fcced974d374e62f55ac 438 Gene3D G3DSA:1.20.1250.20 257 431 1.6E-5 T 22-04-2016 APECO1_RS15885 f11dac33a3e3fcced974d374e62f55ac 438 Pfam PF07690 Major Facilitator Superfamily 33 390 5.5E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS15885 f11dac33a3e3fcced974d374e62f55ac 438 PANTHER PTHR23514 11 186 4.4E-141 T 22-04-2016 APECO1_RS15885 f11dac33a3e3fcced974d374e62f55ac 438 PANTHER PTHR23514 205 431 4.4E-141 T 22-04-2016 APECO1_RS15885 f11dac33a3e3fcced974d374e62f55ac 438 PANTHER PTHR23514:SF7 11 186 4.4E-141 T 22-04-2016 APECO1_RS15885 f11dac33a3e3fcced974d374e62f55ac 438 PANTHER PTHR23514:SF7 205 431 4.4E-141 T 22-04-2016 APECO1_RS15885 f11dac33a3e3fcced974d374e62f55ac 438 SUPERFAMILY SSF103473 20 432 1.96E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS18345 a04f362abdb231dcff8b802527688b2f 209 PANTHER PTHR10920:SF20 1 209 9.3E-145 T 22-04-2016 APECO1_RS18345 a04f362abdb231dcff8b802527688b2f 209 PANTHER PTHR10920 1 209 9.3E-145 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APECO1_RS18345 a04f362abdb231dcff8b802527688b2f 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 1.6E-58 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APECO1_RS18345 a04f362abdb231dcff8b802527688b2f 209 PIRSF PIRSF005461 1 209 8.8E-83 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APECO1_RS18345 a04f362abdb231dcff8b802527688b2f 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 27.794 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APECO1_RS18345 a04f362abdb231dcff8b802527688b2f 209 SUPERFAMILY SSF53335 31 208 1.09E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS18345 a04f362abdb231dcff8b802527688b2f 209 Gene3D G3DSA:3.40.50.150 1 208 7.3E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS18345 a04f362abdb231dcff8b802527688b2f 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 4.9E-97 T 22-04-2016 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 APECO1_RS02560 162ec7abb106af39a28ee70a5a961057 364 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 3 364 49.804 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 APECO1_RS02560 162ec7abb106af39a28ee70a5a961057 364 SMART SM00450 4 134 1.6E-14 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS02560 162ec7abb106af39a28ee70a5a961057 364 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 17 349 1.8E-105 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 APECO1_RS02560 162ec7abb106af39a28ee70a5a961057 364 PANTHER PTHR30401:SF0 1 364 3.3E-223 T 22-04-2016 APECO1_RS02560 162ec7abb106af39a28ee70a5a961057 364 SUPERFAMILY SSF52821 94 155 1.03E-19 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS02560 162ec7abb106af39a28ee70a5a961057 364 SUPERFAMILY SSF52821 9 66 1.03E-19 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS02560 162ec7abb106af39a28ee70a5a961057 364 Gene3D G3DSA:3.40.250.10 11 131 6.9E-32 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS02560 162ec7abb106af39a28ee70a5a961057 364 PANTHER PTHR30401 1 364 3.3E-223 T 22-04-2016 APECO1_RS07560 ab637d140ed4fe34491237b9a786942a 96 Pfam PF07102 Protein of unknown function (DUF1364) 3 94 1.8E-42 T 22-04-2016 IPR010774 Protein of unknown function DUF1364 APECO1_RS07560 ab637d140ed4fe34491237b9a786942a 96 Gene3D G3DSA:3.30.50.20 19 95 2.0E-41 T 22-04-2016 APECO1_RS02165 43b40eec41574e304aeb711bfdc83b82 163 SUPERFAMILY SSF89963 2 89 2.88E-30 T 22-04-2016 IPR007551 Protein of unknown function DUF520 APECO1_RS02165 43b40eec41574e304aeb711bfdc83b82 163 PANTHER PTHR30476 1 163 3.5E-95 T 22-04-2016 APECO1_RS02165 43b40eec41574e304aeb711bfdc83b82 163 PANTHER PTHR30476:SF0 1 163 3.5E-95 T 22-04-2016 APECO1_RS02165 43b40eec41574e304aeb711bfdc83b82 163 Gene3D G3DSA:3.30.70.860 98 163 1.2E-35 T 22-04-2016 APECO1_RS02165 43b40eec41574e304aeb711bfdc83b82 163 SUPERFAMILY SSF89963 91 163 1.99E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 APECO1_RS02165 43b40eec41574e304aeb711bfdc83b82 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.408 T 22-04-2016 IPR007551 Protein of unknown function DUF520 APECO1_RS02165 43b40eec41574e304aeb711bfdc83b82 163 Gene3D G3DSA:3.30.70.990 9 97 6.1E-37 T 22-04-2016 APECO1_RS02165 43b40eec41574e304aeb711bfdc83b82 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 1.6E-65 T 22-04-2016 IPR007551 Protein of unknown function DUF520 APECO1_RS16765 d5b82dd6023baa350cee91b4c505a1bf 108 PANTHER PTHR38778:SF1 2 108 2.0E-55 T 22-04-2016 APECO1_RS16765 d5b82dd6023baa350cee91b4c505a1bf 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 1.2E-43 T 22-04-2016 IPR007416 Protein of unknown function DUF469 APECO1_RS16765 d5b82dd6023baa350cee91b4c505a1bf 108 PANTHER PTHR38778 2 108 2.0E-55 T 22-04-2016 APECO1_RS18520 afd6e4be53c7b45284fdf1a5ec91bce3 154 PANTHER PTHR34986 2 154 2.8E-94 T 22-04-2016 APECO1_RS18520 afd6e4be53c7b45284fdf1a5ec91bce3 154 PANTHER PTHR34986:SF2 2 154 2.8E-94 T 22-04-2016 APECO1_RS18520 afd6e4be53c7b45284fdf1a5ec91bce3 154 SUPERFAMILY SSF51197 1 152 1.84E-43 T 22-04-2016 APECO1_RS18520 afd6e4be53c7b45284fdf1a5ec91bce3 154 Pfam PF04074 Domain of unknown function (DUF386) 1 149 8.5E-41 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS18520 afd6e4be53c7b45284fdf1a5ec91bce3 154 Gene3D G3DSA:2.60.120.370 1 152 4.8E-49 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS18520 afd6e4be53c7b45284fdf1a5ec91bce3 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 2.4E-65 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APECO1_RS23185 0a8d7254626d80286f173ab172d984d7 499 PANTHER PTHR10283 10 499 4.7E-70 T 22-04-2016 APECO1_RS23185 0a8d7254626d80286f173ab172d984d7 499 PIRSF PIRSF002457 5 499 6.8E-133 T 22-04-2016 IPR030676 Citrate carrier CitT-related APECO1_RS23185 0a8d7254626d80286f173ab172d984d7 499 Pfam PF00939 Sodium:sulfate symporter transmembrane region 20 498 1.9E-116 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS23185 0a8d7254626d80286f173ab172d984d7 499 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 493 5.9E-72 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 PANTHER PTHR38786 1 147 9.3E-56 T 22-04-2016 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 PRINTS PR01004 Flagellar FliJ protein signature 27 43 5.6E-82 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 PRINTS PR01004 Flagellar FliJ protein signature 108 126 5.6E-82 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 PRINTS PR01004 Flagellar FliJ protein signature 86 107 5.6E-82 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 PRINTS PR01004 Flagellar FliJ protein signature 126 146 5.6E-82 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 PRINTS PR01004 Flagellar FliJ protein signature 44 61 5.6E-82 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 PRINTS PR01004 Flagellar FliJ protein signature 4 26 5.6E-82 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 PRINTS PR01004 Flagellar FliJ protein signature 63 84 5.6E-82 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 144 3.7E-30 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 Pfam PF02050 Flagellar FliJ protein 19 141 3.6E-34 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 APECO1_RS10370 aebd1758c4cebec09e74fe3aa2ae1765 147 PIRSF PIRSF019404 1 147 6.8E-52 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APECO1_RS24035 0e0a91fde89a433fe6af95b1d9098691 64 Gene3D G3DSA:3.30.420.10 1 50 1.5E-4 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS24035 0e0a91fde89a433fe6af95b1d9098691 64 Pfam PF13683 Integrase core domain 1 50 1.5E-6 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APECO1_RS00560 8f29a96766ed673eefecbfb632b20e53 400 PANTHER PTHR30012 5 397 8.3E-149 T 22-04-2016 APECO1_RS00560 8f29a96766ed673eefecbfb632b20e53 400 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 158 186 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 APECO1_RS00560 8f29a96766ed673eefecbfb632b20e53 400 PANTHER PTHR30012:SF0 5 397 8.3E-149 T 22-04-2016 APECO1_RS00560 8f29a96766ed673eefecbfb632b20e53 400 Pfam PF00482 Type II secretion system (T2SS), protein F 270 388 6.1E-24 T 22-04-2016 IPR018076 Type II secretion system F domain APECO1_RS00560 8f29a96766ed673eefecbfb632b20e53 400 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 4.9E-29 T 22-04-2016 IPR018076 Type II secretion system F domain APECO1_RS00560 8f29a96766ed673eefecbfb632b20e53 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 9.0E-14 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS00560 8f29a96766ed673eefecbfb632b20e53 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 9.0E-14 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS00560 8f29a96766ed673eefecbfb632b20e53 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 361 375 9.0E-14 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS00560 8f29a96766ed673eefecbfb632b20e53 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 396 9.0E-14 T 22-04-2016 IPR003004 GspF/PilC family APECO1_RS00815 dea0bbc42e53c8b6fc09c8cdaa60d642 265 Pfam PF00005 ABC transporter 27 176 7.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS00815 dea0bbc42e53c8b6fc09c8cdaa60d642 265 Gene3D G3DSA:3.40.50.300 14 240 1.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00815 dea0bbc42e53c8b6fc09c8cdaa60d642 265 PANTHER PTHR24220:SF266 13 260 1.7E-141 T 22-04-2016 APECO1_RS00815 dea0bbc42e53c8b6fc09c8cdaa60d642 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS00815 dea0bbc42e53c8b6fc09c8cdaa60d642 265 SUPERFAMILY SSF52540 13 238 3.15E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00815 dea0bbc42e53c8b6fc09c8cdaa60d642 265 SMART SM00382 36 224 4.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS00815 dea0bbc42e53c8b6fc09c8cdaa60d642 265 PANTHER PTHR24220 13 260 1.7E-141 T 22-04-2016 APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 PANTHER PTHR10381 2 207 4.2E-145 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 Gene3D G3DSA:3.90.226.10 16 205 7.0E-91 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 Pfam PF00574 Clp protease 25 205 5.2E-89 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.936 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 22-04-2016 IPR018215 ClpP, Ser active site APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 PANTHER PTHR10381:SF22 2 207 4.2E-145 T 22-04-2016 APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 SUPERFAMILY SSF52096 23 206 1.77E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 22-04-2016 IPR033135 ClpP, histidine active site APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 7.2E-112 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS02225 c80cda9efd4d78c152403bd0ab9e6143 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.2E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APECO1_RS24615 e9f190d75b391b5ae2cd4d929d0c8c0d 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 3.8E-185 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 APECO1_RS24615 e9f190d75b391b5ae2cd4d929d0c8c0d 712 Pfam PF03477 ATP cone domain 4 89 1.9E-21 T 22-04-2016 IPR005144 ATP-cone domain APECO1_RS24615 e9f190d75b391b5ae2cd4d929d0c8c0d 712 PANTHER PTHR21075 1 711 0.0 T 22-04-2016 APECO1_RS24615 e9f190d75b391b5ae2cd4d929d0c8c0d 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APECO1_RS24615 e9f190d75b391b5ae2cd4d929d0c8c0d 712 Gene3D G3DSA:3.20.70.20 124 685 8.5E-190 T 22-04-2016 APECO1_RS24615 e9f190d75b391b5ae2cd4d929d0c8c0d 712 SUPERFAMILY SSF51998 121 687 1.95E-200 T 22-04-2016 APECO1_RS24615 e9f190d75b391b5ae2cd4d929d0c8c0d 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.3E-213 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 114 132 - T 22-04-2016 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 Gene3D G3DSA:1.50.10.10 6 355 1.7E-100 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 Pfam PF01270 Glycosyl hydrolases family 8 1 346 6.8E-149 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 SUPERFAMILY SSF48208 9 350 2.62E-104 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 331 345 1.4E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 240 249 1.4E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 52 65 1.4E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 215 226 1.4E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 114 132 1.4E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APECO1_RS20235 7638abf617b10ec5d61a9a95bbbc1a49 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 179 196 1.4E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APECO1_RS24415 e5627408e2fc40eb9c6a1116a2708f64 104 Pfam PF00436 Single-strand binding protein family 3 87 5.4E-13 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APECO1_RS24415 e5627408e2fc40eb9c6a1116a2708f64 104 SUPERFAMILY SSF50249 1 103 1.75E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24415 e5627408e2fc40eb9c6a1116a2708f64 104 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 30.683 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 APECO1_RS24415 e5627408e2fc40eb9c6a1116a2708f64 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 1.6E-36 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 APECO1_RS24415 e5627408e2fc40eb9c6a1116a2708f64 104 Gene3D G3DSA:2.40.50.140 1 103 2.1E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS24415 e5627408e2fc40eb9c6a1116a2708f64 104 PIRSF PIRSF003135 1 101 2.1E-50 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 APECO1_RS05150 197609e7fd098f0e4b4113dffc0bf80c 375 Pfam PF13473 Cupredoxin-like domain 13 115 6.9E-25 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain APECO1_RS05150 197609e7fd098f0e4b4113dffc0bf80c 375 PANTHER PTHR39192 1 375 6.6E-170 T 22-04-2016 APECO1_RS05150 197609e7fd098f0e4b4113dffc0bf80c 375 Pfam PF09375 Imelysin 135 368 2.4E-44 T 22-04-2016 APECO1_RS05150 197609e7fd098f0e4b4113dffc0bf80c 375 SUPERFAMILY SSF49503 16 116 6.39E-6 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS05150 197609e7fd098f0e4b4113dffc0bf80c 375 Gene3D G3DSA:2.60.40.420 15 116 2.0E-6 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS04220 63da1717bb2dfeaf5ce4866ef263b36f 276 SMART SM00644 32 178 3.6E-43 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APECO1_RS04220 63da1717bb2dfeaf5ce4866ef263b36f 276 Gene3D G3DSA:3.40.80.10 40 197 3.1E-56 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APECO1_RS04220 63da1717bb2dfeaf5ce4866ef263b36f 276 SUPERFAMILY SSF55846 24 194 3.93E-52 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APECO1_RS04220 63da1717bb2dfeaf5ce4866ef263b36f 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 43 179 9.3E-20 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APECO1_RS04220 63da1717bb2dfeaf5ce4866ef263b36f 276 SUPERFAMILY SSF47090 198 273 3.3E-21 T 22-04-2016 IPR002477 Peptidoglycan binding-like APECO1_RS04220 63da1717bb2dfeaf5ce4866ef263b36f 276 PANTHER PTHR30417 6 276 3.1E-83 T 22-04-2016 APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 7 22 5.84E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 43 61 5.84E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 PRINTS PR00050 Cold shock protein signature 28 37 5.84E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 SUPERFAMILY SSF50249 4 69 3.94E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 PANTHER PTHR11544:SF65 1 70 2.3E-46 T 22-04-2016 APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 SMART SM00357 6 70 2.5E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 Gene3D G3DSA:2.40.50.140 5 68 3.2E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 8.6E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 PIRSF PIRSF002599 1 70 1.1E-25 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APECO1_RS20395 40785a8282413070fe126dfd41e458ff 70 PANTHER PTHR11544 1 70 2.3E-46 T 22-04-2016 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 SUPERFAMILY SSF55681 98 464 1.06E-95 T 22-04-2016 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.6E-212 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.8E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.8E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.8E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.8E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 3.7E-82 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 PANTHER PTHR22594:SF6 6 180 3.5E-249 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 PANTHER PTHR22594:SF6 199 464 3.5E-249 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 SUPERFAMILY SSF50249 16 101 1.82E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.355 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 Gene3D G3DSA:2.40.50.140 16 103 2.0E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 Gene3D G3DSA:3.30.930.10 109 462 2.4E-111 T 22-04-2016 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 PANTHER PTHR22594 6 180 3.5E-249 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 PANTHER PTHR22594 199 464 3.5E-249 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APECO1_RS04765 2d207fb81116741552eeb7ee964cf312 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.8E-12 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APECO1_RS23375 0c4501fed4227d227d5c9f20e2e5da36 683 PANTHER PTHR30509:SF3 8 633 0.0 T 22-04-2016 APECO1_RS23375 0c4501fed4227d227d5c9f20e2e5da36 683 PANTHER PTHR30509 8 633 0.0 T 22-04-2016 APECO1_RS23375 0c4501fed4227d227d5c9f20e2e5da36 683 Pfam PF04632 Fusaric acid resistance protein family 37 536 1.0E-30 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APECO1_RS16920 1275f14ae7404a5f47d993aef3b77cb0 96 PANTHER PTHR37936 1 96 5.9E-26 T 22-04-2016 APECO1_RS16920 1275f14ae7404a5f47d993aef3b77cb0 96 Pfam PF01527 Transposase 2 62 3.0E-14 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APECO1_RS16920 1275f14ae7404a5f47d993aef3b77cb0 96 Gene3D G3DSA:1.10.10.60 2 77 3.1E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS16920 1275f14ae7404a5f47d993aef3b77cb0 96 SUPERFAMILY SSF46689 2 79 8.78E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS05985 ef66f2167cfc95babc42ce490ac440a9 501 Pfam PF01343 Peptidase family S49 146 293 9.4E-35 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APECO1_RS05985 ef66f2167cfc95babc42ce490ac440a9 501 PANTHER PTHR33209:SF4 54 428 7.2E-77 T 22-04-2016 APECO1_RS05985 ef66f2167cfc95babc42ce490ac440a9 501 SUPERFAMILY SSF52096 67 193 7.71E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS05985 ef66f2167cfc95babc42ce490ac440a9 501 SUPERFAMILY SSF52096 224 282 7.71E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS05985 ef66f2167cfc95babc42ce490ac440a9 501 PANTHER PTHR33209 54 428 7.2E-77 T 22-04-2016 APECO1_RS05985 ef66f2167cfc95babc42ce490ac440a9 501 Gene3D G3DSA:3.90.226.10 76 189 5.8E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS05985 ef66f2167cfc95babc42ce490ac440a9 501 Gene3D G3DSA:3.90.226.10 256 294 5.8E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS16500 2590211523acc83d0fb0e70cecee629a 194 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 178 5.8E-42 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APECO1_RS16500 2590211523acc83d0fb0e70cecee629a 194 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 13 168 2.1E-14 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APECO1_RS16500 2590211523acc83d0fb0e70cecee629a 194 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 8 192 37.197 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APECO1_RS16500 2590211523acc83d0fb0e70cecee629a 194 PANTHER PTHR37528 4 194 1.0E-65 T 22-04-2016 APECO1_RS16500 2590211523acc83d0fb0e70cecee629a 194 SUPERFAMILY SSF101327 9 178 1.22E-54 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APECO1_RS06880 93636004365447e8f6b20fa9c493fd41 250 Gene3D G3DSA:2.60.40.1080 159 244 1.5E-7 T 22-04-2016 APECO1_RS06880 93636004365447e8f6b20fa9c493fd41 250 SMART SM00635 160 240 2.5E-18 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 APECO1_RS06880 93636004365447e8f6b20fa9c493fd41 250 Pfam PF02368 Bacterial Ig-like domain (group 2) 161 241 1.0E-17 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 APECO1_RS06880 93636004365447e8f6b20fa9c493fd41 250 Pfam PF16461 Lambda phage tail tube protein, TTP 3 154 4.8E-70 T 22-04-2016 IPR032494 Lambda phage tail tube protein APECO1_RS06880 93636004365447e8f6b20fa9c493fd41 250 SUPERFAMILY SSF49373 157 243 9.42E-5 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APECO1_RS05795 1b5f57ea3bd7900c60dd9580fdbb6d18 98 Pfam PF06064 Host-nuclease inhibitor protein Gam 1 98 9.8E-64 T 22-04-2016 IPR009274 Host-nuclease inhibitor Gam APECO1_RS05795 1b5f57ea3bd7900c60dd9580fdbb6d18 98 ProDom PD084412 GAM INHIBITOR HOST-NUCLEASE BACTERIPHAGE CP-933V BP- 933W PROPHAGE 1 98 6.0E-52 T 22-04-2016 IPR009274 Host-nuclease inhibitor Gam APECO1_RS08340 dad9075b5407b3bb67b0547fbc8f1f7a 304 PANTHER PTHR33281 1 303 2.8E-204 T 22-04-2016 APECO1_RS08340 dad9075b5407b3bb67b0547fbc8f1f7a 304 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 280 2.0E-56 T 22-04-2016 IPR021134 Bestrophin/UPF0187 APECO1_RS08340 dad9075b5407b3bb67b0547fbc8f1f7a 304 PANTHER PTHR33281:SF3 1 303 2.8E-204 T 22-04-2016 APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 SUPERFAMILY SSF54909 74 157 4.16E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 Gene3D G3DSA:1.10.10.10 13 64 1.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 SMART SM00344 12 121 3.5E-55 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 Gene3D G3DSA:3.30.70.920 65 161 2.3E-33 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 PANTHER PTHR30154:SF0 4 162 3.2E-107 T 22-04-2016 APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.7E-21 T 22-04-2016 APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 PANTHER PTHR30154 4 162 3.2E-107 T 22-04-2016 APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.1E-24 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS04365 60feb0dfbdfa96c198c39b45781a4348 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APECO1_RS03425 1f8e5f6ccb931658a7d0407519b276a7 247 Gene3D G3DSA:3.40.1390.30 1 107 1.5E-40 T 22-04-2016 APECO1_RS03425 1f8e5f6ccb931658a7d0407519b276a7 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 4.3E-83 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APECO1_RS03425 1f8e5f6ccb931658a7d0407519b276a7 247 SUPERFAMILY SSF102705 1 246 4.84E-85 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APECO1_RS03425 1f8e5f6ccb931658a7d0407519b276a7 247 PANTHER PTHR13799 1 243 3.3E-94 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APECO1_RS03425 1f8e5f6ccb931658a7d0407519b276a7 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 2.3E-57 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APECO1_RS03425 1f8e5f6ccb931658a7d0407519b276a7 247 Gene3D G3DSA:3.40.1390.30 108 214 1.8E-29 T 22-04-2016 APECO1_RS17940 fe5a6a7bc402629892ce910566406161 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 311 4.8E-121 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 APECO1_RS17940 fe5a6a7bc402629892ce910566406161 321 PANTHER PTHR30238 5 321 6.1E-162 T 22-04-2016 APECO1_RS17940 fe5a6a7bc402629892ce910566406161 321 PANTHER PTHR30238:SF0 5 321 6.1E-162 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 APECO1_RS17940 fe5a6a7bc402629892ce910566406161 321 Pfam PF03741 Integral membrane protein TerC family 80 282 8.5E-57 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APECO1_RS25470 dd2ebbc7b119e354abc20a03cb7de564 792 PANTHER PTHR35191 3 359 2.0E-46 T 22-04-2016 APECO1_RS25470 dd2ebbc7b119e354abc20a03cb7de564 792 Pfam PF08400 Prophage tail fibre N-terminal 3 132 6.6E-67 T 22-04-2016 IPR013609 Bacteriophage 933W, L0121, tail fibre, N-terminal APECO1_RS25470 dd2ebbc7b119e354abc20a03cb7de564 792 SUPERFAMILY SSF49464 5 82 1.1E-6 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APECO1_RS25470 dd2ebbc7b119e354abc20a03cb7de564 792 Gene3D G3DSA:2.60.40.1120 6 82 1.8E-7 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain APECO1_RS03140 4eff4b7ee0ad58011f2270ddd618bc6a 224 PANTHER PTHR30614:SF1 1 224 5.2E-145 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 APECO1_RS03140 4eff4b7ee0ad58011f2270ddd618bc6a 224 SUPERFAMILY SSF161098 14 210 8.5E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03140 4eff4b7ee0ad58011f2270ddd618bc6a 224 PANTHER PTHR30614 1 224 5.2E-145 T 22-04-2016 APECO1_RS03140 4eff4b7ee0ad58011f2270ddd618bc6a 224 Gene3D G3DSA:1.10.3720.10 13 223 2.0E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03140 4eff4b7ee0ad58011f2270ddd618bc6a 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 1.8E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS03140 4eff4b7ee0ad58011f2270ddd618bc6a 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 6.2E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS14820 521ad86301e1f08cd3c4c4a32548a8e6 158 SUPERFAMILY SSF55961 14 157 1.04E-34 T 22-04-2016 APECO1_RS14820 521ad86301e1f08cd3c4c4a32548a8e6 158 PANTHER PTHR12901:SF7 8 155 4.3E-67 T 22-04-2016 APECO1_RS14820 521ad86301e1f08cd3c4c4a32548a8e6 158 Gene3D G3DSA:3.30.530.20 14 155 2.8E-49 T 22-04-2016 IPR023393 START-like domain APECO1_RS14820 521ad86301e1f08cd3c4c4a32548a8e6 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 23 148 4.1E-32 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain APECO1_RS14820 521ad86301e1f08cd3c4c4a32548a8e6 158 PANTHER PTHR12901 8 155 4.3E-67 T 22-04-2016 APECO1_RS13660 b0aa1b05b7bdea325d136bf135479331 474 PANTHER PTHR30175:SF3 4 474 1.7E-224 T 22-04-2016 APECO1_RS13660 b0aa1b05b7bdea325d136bf135479331 474 SUPERFAMILY SSF55604 9 82 6.28E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS13660 b0aa1b05b7bdea325d136bf135479331 474 PANTHER PTHR30175 4 474 1.7E-224 T 22-04-2016 APECO1_RS13660 b0aa1b05b7bdea325d136bf135479331 474 Gene3D G3DSA:3.30.1360.60 7 84 7.7E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS13660 b0aa1b05b7bdea325d136bf135479331 474 Pfam PF00367 phosphotransferase system, EIIB 13 44 1.5E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS13660 b0aa1b05b7bdea325d136bf135479331 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS13660 b0aa1b05b7bdea325d136bf135479331 474 Pfam PF02378 Phosphotransferase system, EIIC 120 401 1.9E-41 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS06275 4b9d8a9cd5598f49b9747da4962527b3 510 PANTHER PTHR30029:SF2 9 507 2.5E-248 T 22-04-2016 APECO1_RS06275 4b9d8a9cd5598f49b9747da4962527b3 510 PANTHER PTHR30029 9 507 2.5E-248 T 22-04-2016 APECO1_RS06275 4b9d8a9cd5598f49b9747da4962527b3 510 Pfam PF04293 SpoVR like protein 19 450 8.0E-177 T 22-04-2016 IPR007390 Sporulation stage V, protein R APECO1_RS07665 ee75e7b8728420efc313d09fd715c559 130 Pfam PF13554 Bacteriophage related domain of unknown function 6 106 4.7E-11 T 22-04-2016 IPR025395 Protein of unknown function DUF4128 APECO1_RS14230 56c85f716cd663d4fa2ceb8b68a4b614 458 PANTHER PTHR30008 2 455 2.6E-192 T 22-04-2016 APECO1_RS14230 56c85f716cd663d4fa2ceb8b68a4b614 458 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.9E-102 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APECO1_RS14230 56c85f716cd663d4fa2ceb8b68a4b614 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 2.8E-140 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APECO1_RS14230 56c85f716cd663d4fa2ceb8b68a4b614 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.416 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APECO1_RS14230 56c85f716cd663d4fa2ceb8b68a4b614 458 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 2.1E-32 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 APECO1_RS14230 56c85f716cd663d4fa2ceb8b68a4b614 458 PANTHER PTHR30008:SF0 2 455 2.6E-192 T 22-04-2016 APECO1_RS25165 e43c37ee98e8c8895dcb5d994273b9c9 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.1E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS25165 e43c37ee98e8c8895dcb5d994273b9c9 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.1E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS25165 e43c37ee98e8c8895dcb5d994273b9c9 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.1E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS25165 e43c37ee98e8c8895dcb5d994273b9c9 225 SUPERFAMILY SSF46894 145 205 8.16E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS25165 e43c37ee98e8c8895dcb5d994273b9c9 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 204 1.8E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS25165 e43c37ee98e8c8895dcb5d994273b9c9 225 Gene3D G3DSA:1.10.10.10 152 207 1.4E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25165 e43c37ee98e8c8895dcb5d994273b9c9 225 SMART SM00421 150 207 4.4E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS03560 1e1828c0742140a6de08596d430a0a45 416 PANTHER PTHR23242 2 304 1.5E-48 T 22-04-2016 APECO1_RS03560 1e1828c0742140a6de08596d430a0a45 416 TIGRFAM TIGR02794 tolA_full: protein TolA 12 243 2.6E-47 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APECO1_RS03560 1e1828c0742140a6de08596d430a0a45 416 TIGRFAM TIGR02794 tolA_full: protein TolA 232 416 4.2E-45 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APECO1_RS03560 1e1828c0742140a6de08596d430a0a45 416 Gene3D G3DSA:3.30.1150.10 318 416 2.6E-45 T 22-04-2016 APECO1_RS03560 1e1828c0742140a6de08596d430a0a45 416 Pfam PF06519 TolA C-terminal 321 414 3.9E-38 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APECO1_RS03560 1e1828c0742140a6de08596d430a0a45 416 SUPERFAMILY SSF74653 329 416 8.04E-23 T 22-04-2016 APECO1_RS08875 9e5e4071a9d1b9e3765784083543f591 115 PIRSF PIRSF005894 1 108 1.0E-52 T 22-04-2016 IPR014434 Monothiol glutaredoxin APECO1_RS08875 9e5e4071a9d1b9e3765784083543f591 115 PANTHER PTHR10293 2 115 3.5E-60 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related APECO1_RS08875 9e5e4071a9d1b9e3765784083543f591 115 Gene3D G3DSA:3.40.30.10 8 102 2.8E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS08875 9e5e4071a9d1b9e3765784083543f591 115 SUPERFAMILY SSF52833 2 104 1.99E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS08875 9e5e4071a9d1b9e3765784083543f591 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 4.7E-47 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related APECO1_RS08875 9e5e4071a9d1b9e3765784083543f591 115 Pfam PF00462 Glutaredoxin 17 81 1.7E-18 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APECO1_RS00910 75b8e7871c67938515ee3f14a5c26b15 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.0E-81 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APECO1_RS00910 75b8e7871c67938515ee3f14a5c26b15 185 Gene3D G3DSA:1.10.132.20 67 184 2.9E-44 T 22-04-2016 IPR023584 Ribosome recycling factor domain APECO1_RS00910 75b8e7871c67938515ee3f14a5c26b15 185 Pfam PF01765 Ribosome recycling factor 20 183 6.8E-63 T 22-04-2016 IPR023584 Ribosome recycling factor domain APECO1_RS00910 75b8e7871c67938515ee3f14a5c26b15 185 SUPERFAMILY SSF55194 2 184 2.09E-71 T 22-04-2016 IPR023584 Ribosome recycling factor domain APECO1_RS00910 75b8e7871c67938515ee3f14a5c26b15 185 PANTHER PTHR20982 1 185 5.2E-83 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APECO1_RS00910 75b8e7871c67938515ee3f14a5c26b15 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.437 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APECO1_RS12210 9616167ae8a8e93514c6041c1f1cdc4e 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.53 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APECO1_RS12210 9616167ae8a8e93514c6041c1f1cdc4e 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 1.0E-45 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APECO1_RS12210 9616167ae8a8e93514c6041c1f1cdc4e 94 SUPERFAMILY SSF50715 1 93 1.13E-31 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APECO1_RS12210 9616167ae8a8e93514c6041c1f1cdc4e 94 PANTHER PTHR33284 1 94 1.6E-41 T 22-04-2016 APECO1_RS12210 9616167ae8a8e93514c6041c1f1cdc4e 94 Pfam PF01386 Ribosomal L25p family 4 91 2.2E-25 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APECO1_RS12210 9616167ae8a8e93514c6041c1f1cdc4e 94 Gene3D G3DSA:2.40.240.10 1 93 1.3E-35 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APECO1_RS23250 52258828d5982dfc68a479832f1b944c 449 PANTHER PTHR11119 13 444 0.0 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS23250 52258828d5982dfc68a479832f1b944c 449 Pfam PF00860 Permease family 26 409 1.2E-88 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS23250 52258828d5982dfc68a479832f1b944c 449 PANTHER PTHR11119:SF42 13 444 0.0 T 22-04-2016 APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 SUPERFAMILY SSF81901 85 215 2.49E-19 T 22-04-2016 APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 PANTHER PTHR11102:SF11 18 216 1.0E-24 T 22-04-2016 APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 Gene3D G3DSA:1.25.40.10 25 227 6.8E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 Pfam PF08238 Sel1 repeat 143 173 1.7E-4 T 22-04-2016 IPR006597 Sel1-like repeat APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 Pfam PF08238 Sel1 repeat 48 66 0.031 T 22-04-2016 IPR006597 Sel1-like repeat APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 Pfam PF08238 Sel1 repeat 85 101 68.0 T 22-04-2016 IPR006597 Sel1-like repeat APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 Pfam PF08238 Sel1 repeat 180 215 2.2E-5 T 22-04-2016 IPR006597 Sel1-like repeat APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 SUPERFAMILY SSF81901 25 103 3.27E-12 T 22-04-2016 APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 SMART SM00671 35 66 3.3 T 22-04-2016 IPR006597 Sel1-like repeat APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 SMART SM00671 67 101 14.0 T 22-04-2016 IPR006597 Sel1-like repeat APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 SMART SM00671 179 216 3.6E-4 T 22-04-2016 IPR006597 Sel1-like repeat APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 SMART SM00671 142 177 2.3E-5 T 22-04-2016 IPR006597 Sel1-like repeat APECO1_RS23330 23da7f75db954231bbdfb9ce621a0c3e 229 PANTHER PTHR11102 18 216 1.0E-24 T 22-04-2016 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 SUPERFAMILY SSF50939 204 726 1.02E-303 T 22-04-2016 IPR011040 Sialidases APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 Gene3D G3DSA:3.30.750.60 200 270 3.7E-25 T 22-04-2016 IPR024429 Endosialidase, N-terminal extension domain APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 Pfam PF13884 Chaperone of endosialidase 877 933 1.0E-7 T 22-04-2016 IPR030392 Intramolecular chaperone auto-processing domain APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 Pfam PF12217 Catalytic beta propeller domain of bacteriophage endosialidase 272 721 4.0E-287 T 22-04-2016 IPR024428 Endosialidase, beta propeller domain APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 PRINTS PR00849 Glycosyl hydrolase family 58 signature 769 795 3.4E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 PRINTS PR00849 Glycosyl hydrolase family 58 signature 534 560 3.4E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 PRINTS PR00849 Glycosyl hydrolase family 58 signature 338 366 3.4E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 PRINTS PR00849 Glycosyl hydrolase family 58 signature 668 692 3.4E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 PRINTS PR00849 Glycosyl hydrolase family 58 signature 801 828 3.4E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 PRINTS PR00849 Glycosyl hydrolase family 58 signature 273 297 3.4E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 PRINTS PR00849 Glycosyl hydrolase family 58 signature 612 638 3.4E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 PRINTS PR00849 Glycosyl hydrolase family 58 signature 457 480 3.4E-104 T 22-04-2016 IPR001724 Glycosyl hydrolase 58 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 Gene3D G3DSA:4.10.1090.10 723 876 4.9E-85 T 22-04-2016 IPR024430 Endosialidase, C-terminal domain APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 Pfam PF12218 N terminal extension of bacteriophage endosialidase 205 271 1.2E-31 T 22-04-2016 IPR024429 Endosialidase, N-terminal extension domain APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 Gene3D G3DSA:2.40.30.20 384 469 2.7E-37 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 SUPERFAMILY SSF69349 727 876 3.3E-70 T 22-04-2016 APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 Pfam PF12219 Catalytic domain of bacteriophage endosialidase 722 876 1.0E-77 T 22-04-2016 IPR024430 Endosialidase, C-terminal domain APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 Gene3D G3DSA:2.120.10.10 272 382 1.8E-200 T 22-04-2016 IPR011040 Sialidases APECO1_RS13980 9e6a4359df1d67af2df53c0a24721513 1039 Gene3D G3DSA:2.120.10.10 470 722 1.8E-200 T 22-04-2016 IPR011040 Sialidases APECO1_RS08050 a0d0c70a84791709721127bafff9ee41 700 Pfam PF00593 TonB dependent receptor 448 695 2.2E-36 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS08050 a0d0c70a84791709721127bafff9ee41 700 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 42 695 3.9E-67 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APECO1_RS08050 a0d0c70a84791709721127bafff9ee41 700 Gene3D G3DSA:2.170.130.10 28 151 7.5E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS08050 a0d0c70a84791709721127bafff9ee41 700 PANTHER PTHR32552 1 697 0.0 T 22-04-2016 APECO1_RS08050 a0d0c70a84791709721127bafff9ee41 700 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 151 1.9E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS08050 a0d0c70a84791709721127bafff9ee41 700 SUPERFAMILY SSF56935 25 696 5.86E-121 T 22-04-2016 APECO1_RS08050 a0d0c70a84791709721127bafff9ee41 700 Gene3D G3DSA:2.40.170.20 152 695 2.3E-109 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS08050 a0d0c70a84791709721127bafff9ee41 700 PANTHER PTHR32552:SF13 1 697 0.0 T 22-04-2016 APECO1_RS01990 f56ff73e7f6c423930890051121a4e41 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 2.0E-123 T 22-04-2016 IPR010843 Uncharacterised protein family AroM APECO1_RS01990 f56ff73e7f6c423930890051121a4e41 225 Pfam PF07302 AroM protein 5 224 5.9E-71 T 22-04-2016 IPR010843 Uncharacterised protein family AroM APECO1_RS04550 be31dff448b86b61c7c58580378e63fb 176 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 143 1.8E-63 T 22-04-2016 IPR006521 Tail protein I APECO1_RS04550 be31dff448b86b61c7c58580378e63fb 176 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 143 1.9E-54 T 22-04-2016 IPR006521 Tail protein I APECO1_RS06045 e44f0d52aab72d0f9eec559a15593bf7 232 Pfam PF05100 Phage minor tail protein L 29 230 2.2E-98 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS06045 e44f0d52aab72d0f9eec559a15593bf7 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 5.6E-99 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS13550 6b14ab860d8ddf34315411236b85ea28 418 Gene3D G3DSA:1.20.1250.20 206 408 1.3E-21 T 22-04-2016 APECO1_RS13550 6b14ab860d8ddf34315411236b85ea28 418 Pfam PF03825 Nucleoside H+ symporter 1 407 2.2E-189 T 22-04-2016 APECO1_RS13550 6b14ab860d8ddf34315411236b85ea28 418 Gene3D G3DSA:1.20.1250.20 7 187 6.1E-12 T 22-04-2016 APECO1_RS13550 6b14ab860d8ddf34315411236b85ea28 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 2.9E-226 T 22-04-2016 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 APECO1_RS13550 6b14ab860d8ddf34315411236b85ea28 418 PANTHER PTHR23522 1 418 0.0 T 22-04-2016 APECO1_RS13550 6b14ab860d8ddf34315411236b85ea28 418 SUPERFAMILY SSF103473 6 407 7.19E-34 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS13550 6b14ab860d8ddf34315411236b85ea28 418 PANTHER PTHR23522:SF4 1 418 0.0 T 22-04-2016 APECO1_RS03820 06a95d6765bcadbb4e8727ed31664b6b 318 PANTHER PTHR34697 1 298 2.1E-35 T 22-04-2016 APECO1_RS03820 06a95d6765bcadbb4e8727ed31664b6b 318 PANTHER PTHR34697:SF2 1 298 2.1E-35 T 22-04-2016 APECO1_RS03820 06a95d6765bcadbb4e8727ed31664b6b 318 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 295 2.1E-16 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APECO1_RS23225 51aaf3dcb27be7b8784c06c1895d0b3c 178 Pfam PF00436 Single-strand binding protein family 6 112 8.5E-43 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APECO1_RS23225 51aaf3dcb27be7b8784c06c1895d0b3c 178 PANTHER PTHR10302 4 178 5.4E-58 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APECO1_RS23225 51aaf3dcb27be7b8784c06c1895d0b3c 178 SUPERFAMILY SSF50249 4 178 1.34E-63 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS23225 51aaf3dcb27be7b8784c06c1895d0b3c 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 178 3.2E-62 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APECO1_RS23225 51aaf3dcb27be7b8784c06c1895d0b3c 178 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 40.014 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APECO1_RS23225 51aaf3dcb27be7b8784c06c1895d0b3c 178 Gene3D G3DSA:2.40.50.140 4 178 4.6E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS23225 51aaf3dcb27be7b8784c06c1895d0b3c 178 PIRSF PIRSF002070 2 161 1.1E-41 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 PANTHER PTHR11609 1 336 2.3E-113 T 22-04-2016 APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 SUPERFAMILY SSF56059 79 274 1.03E-58 T 22-04-2016 APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 SUPERFAMILY SSF52440 2 76 7.63E-16 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 Pfam PF02222 ATP-grasp domain 88 254 1.7E-56 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 Gene3D G3DSA:3.40.50.20 1 69 1.0E-24 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 PANTHER PTHR11609:SF5 1 336 2.3E-113 T 22-04-2016 APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 329 9.1E-117 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 33.579 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 SUPERFAMILY SSF51246 278 353 5.96E-21 T 22-04-2016 IPR011054 Rudiment single hybrid motif APECO1_RS02650 68f202ca280f19c9f00177ce430d7d0b 355 Gene3D G3DSA:3.30.470.20 119 353 6.4E-82 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APECO1_RS08225 1b871d1f40e9285dc4ba2952236a8de9 511 PIRSF PIRSF006060 6 485 2.6E-67 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS08225 1b871d1f40e9285dc4ba2952236a8de9 511 PANTHER PTHR11785 21 510 2.0E-225 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS08225 1b871d1f40e9285dc4ba2952236a8de9 511 PANTHER PTHR11785:SF216 21 510 2.0E-225 T 22-04-2016 APECO1_RS08225 1b871d1f40e9285dc4ba2952236a8de9 511 Pfam PF13520 Amino acid permease 13 451 2.4E-56 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS08225 1b871d1f40e9285dc4ba2952236a8de9 511 TIGRFAM TIGR00910 2A0307_GadC: glutamate:gamma-aminobutyrate antiporter 1 511 0.0 T 22-04-2016 IPR004759 Glutamate:g-aminobutyrate antiporter GO:0006865|GO:0016021 APECO1_RS03960 ae0217774ffe823c6a5af0134fcdf085 527 PANTHER PTHR30443:SF4 3 527 2.4E-302 T 22-04-2016 APECO1_RS03960 ae0217774ffe823c6a5af0134fcdf085 527 SUPERFAMILY SSF53649 220 487 1.96E-19 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS03960 ae0217774ffe823c6a5af0134fcdf085 527 PANTHER PTHR30443 3 527 2.4E-302 T 22-04-2016 APECO1_RS03960 ae0217774ffe823c6a5af0134fcdf085 527 Gene3D G3DSA:3.40.720.10 220 486 9.3E-13 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS03960 ae0217774ffe823c6a5af0134fcdf085 527 Pfam PF00884 Sulfatase 217 483 3.4E-43 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 PIRSF PIRSF038971 1 378 3.5E-154 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 Gene3D G3DSA:2.30.40.10 1 87 1.0E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 Gene3D G3DSA:3.20.20.140 88 376 2.8E-9 T 22-04-2016 APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 PANTHER PTHR11271:SF43 1 378 5.0E-214 T 22-04-2016 APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 2.7E-166 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 SUPERFAMILY SSF51338 345 377 7.56E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 SUPERFAMILY SSF51338 1 50 7.56E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 SUPERFAMILY SSF51556 50 345 2.3E-22 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 Pfam PF07969 Amidohydrolase family 190 378 2.4E-12 T 22-04-2016 IPR013108 Amidohydrolase 3 APECO1_RS23455 2cbe7f4bcb5089b68009def038b3ceb9 378 PANTHER PTHR11271 1 378 5.0E-214 T 22-04-2016 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 SUPERFAMILY SSF56935 33 729 1.7E-120 T 22-04-2016 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 22-04-2016 IPR010916 TonB box, conserved site APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 Pfam PF00593 TonB dependent receptor 493 728 3.1E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 729 1.4E-177 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 PANTHER PTHR32552:SF37 8 46 0.0 T 22-04-2016 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 PANTHER PTHR32552:SF37 67 729 0.0 T 22-04-2016 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 Gene3D G3DSA:2.40.170.20 192 729 3.5E-133 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 175 1.3E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 Gene3D G3DSA:2.170.130.10 57 183 5.2E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 PANTHER PTHR32552 8 46 0.0 T 22-04-2016 APECO1_RS05560 f5b05a3df4008d3547af1b999e4b1bf4 729 PANTHER PTHR32552 67 729 0.0 T 22-04-2016 APECO1_RS19500 b994f7e159789c2d72f9d9ecfbe6ddb1 75 Pfam PF04023 FeoA domain 5 71 3.0E-8 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APECO1_RS19500 b994f7e159789c2d72f9d9ecfbe6ddb1 75 PANTHER PTHR33238 5 75 1.6E-24 T 22-04-2016 APECO1_RS19500 b994f7e159789c2d72f9d9ecfbe6ddb1 75 SUPERFAMILY SSF50037 2 73 7.33E-17 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal APECO1_RS19500 b994f7e159789c2d72f9d9ecfbe6ddb1 75 SMART SM00899 1 72 4.2E-8 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APECO1_RS15570 0b23099c6aae1c59e4a8421f35d0ace7 420 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 253 411 6.1E-41 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain APECO1_RS15570 0b23099c6aae1c59e4a8421f35d0ace7 420 Pfam PF07005 Putative sugar-binding N-terminal domain 4 227 3.0E-69 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain APECO1_RS15570 0b23099c6aae1c59e4a8421f35d0ace7 420 PANTHER PTHR30304:SF3 122 420 8.9E-136 T 22-04-2016 APECO1_RS15570 0b23099c6aae1c59e4a8421f35d0ace7 420 PANTHER PTHR30304 122 420 8.9E-136 T 22-04-2016 APECO1_RS15570 0b23099c6aae1c59e4a8421f35d0ace7 420 SUPERFAMILY SSF142764 4 418 3.92E-130 T 22-04-2016 APECO1_RS11615 b071d9d949559b52850807eceae600d1 203 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 7 143 2.8E-63 T 22-04-2016 IPR006521 Tail protein I APECO1_RS11615 b071d9d949559b52850807eceae600d1 203 Pfam PF09684 Phage tail protein (Tail_P2_I) 7 143 3.0E-54 T 22-04-2016 IPR006521 Tail protein I APECO1_RS01180 f88ed2b13e7b4c04c8152a7abe833690 448 PANTHER PTHR35566:SF1 2 448 4.3E-151 T 22-04-2016 APECO1_RS01180 f88ed2b13e7b4c04c8152a7abe833690 448 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 20 446 5.4E-134 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 APECO1_RS01180 f88ed2b13e7b4c04c8152a7abe833690 448 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 447 6.1E-143 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 APECO1_RS01180 f88ed2b13e7b4c04c8152a7abe833690 448 PANTHER PTHR35566 2 448 4.3E-151 T 22-04-2016 APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 PANTHER PTHR22936 16 200 3.0E-33 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 Gene3D G3DSA:2.130.10.10 297 423 3.8E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 Gene3D G3DSA:2.130.10.10 240 245 3.8E-24 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 Gene3D G3DSA:2.130.10.10 424 592 1.2E-12 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 Pfam PF10282 Lactonase, 7-bladed beta-propeller 300 421 6.0E-5 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 SUPERFAMILY SSF144091 12 204 2.09E-38 T 22-04-2016 APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 Gene3D G3DSA:1.20.1540.10 13 200 2.3E-37 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 SUPERFAMILY SSF51004 295 480 1.49E-34 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 SUPERFAMILY SSF51004 533 594 1.49E-34 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APECO1_RS03155 8ec378b20fb150a2517b4d02544fef11 625 Pfam PF01694 Rhomboid family 58 202 2.6E-29 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APECO1_RS22585 97dd67b940c790b01abcb64aa6bcf9af 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 1.6E-78 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS22585 97dd67b940c790b01abcb64aa6bcf9af 257 Gene3D G3DSA:3.40.1160.10 2 256 1.1E-79 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22585 97dd67b940c790b01abcb64aa6bcf9af 257 Pfam PF00696 Amino acid kinase family 4 234 8.5E-39 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22585 97dd67b940c790b01abcb64aa6bcf9af 257 PIRSF PIRSF000728 1 257 2.6E-74 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS22585 97dd67b940c790b01abcb64aa6bcf9af 257 SUPERFAMILY SSF53633 2 255 7.59E-62 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS22585 97dd67b940c790b01abcb64aa6bcf9af 257 PANTHER PTHR23342 1 256 2.8E-99 T 22-04-2016 APECO1_RS22585 97dd67b940c790b01abcb64aa6bcf9af 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 25.925 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APECO1_RS21280 3fb2549c0452e2100be49f3a0d2cffea 346 Gene3D G3DSA:3.40.190.10 27 177 4.2E-56 T 22-04-2016 APECO1_RS21280 3fb2549c0452e2100be49f3a0d2cffea 346 Gene3D G3DSA:3.40.190.10 181 338 2.8E-36 T 22-04-2016 APECO1_RS21280 3fb2549c0452e2100be49f3a0d2cffea 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 5.5E-127 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APECO1_RS21280 3fb2549c0452e2100be49f3a0d2cffea 346 PANTHER PTHR30570 1 340 8.2E-138 T 22-04-2016 APECO1_RS21280 3fb2549c0452e2100be49f3a0d2cffea 346 PIRSF PIRSF002756 1 338 1.9E-105 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APECO1_RS21280 3fb2549c0452e2100be49f3a0d2cffea 346 Pfam PF12849 PBP superfamily domain 27 307 7.6E-63 T 22-04-2016 IPR024370 PBP domain APECO1_RS21280 3fb2549c0452e2100be49f3a0d2cffea 346 SUPERFAMILY SSF53850 27 339 6.04E-98 T 22-04-2016 APECO1_RS21280 3fb2549c0452e2100be49f3a0d2cffea 346 PANTHER PTHR30570:SF0 1 340 8.2E-138 T 22-04-2016 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PANTHER PTHR30033 1 547 1.2E-123 T 22-04-2016 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 SUPERFAMILY SSF64518 103 545 6.02E-57 T 22-04-2016 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PANTHER PTHR30033:SF1 1 547 1.2E-123 T 22-04-2016 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 491 546 7.9E-8 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 440 459 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 466 487 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 513 537 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 PRINTS PR01005 Flagellar hook-associated protein signature 408 425 1.4E-152 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 341 1.1E-77 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APECO1_RS05460 3cbe0cfe9787c2d4b6bb73ca37d8d945 547 Pfam PF00460 Flagella basal body rod protein 5 35 3.3E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APECO1_RS01255 8e11408020d7b303268b6d67c484b2c4 161 PANTHER PTHR30298 36 161 3.3E-40 T 22-04-2016 APECO1_RS01255 8e11408020d7b303268b6d67c484b2c4 161 Pfam PF01609 Transposase DDE domain 28 146 1.9E-7 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APECO1_RS08355 81d64e671d676c9ebb830f19ec098db3 472 PANTHER PTHR10799:SF710 192 466 2.3E-26 T 22-04-2016 APECO1_RS08355 81d64e671d676c9ebb830f19ec098db3 472 Gene3D G3DSA:3.30.70.270 305 464 3.4E-41 T 22-04-2016 APECO1_RS08355 81d64e671d676c9ebb830f19ec098db3 472 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 461 1.4E-42 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08355 81d64e671d676c9ebb830f19ec098db3 472 SMART SM00267 292 465 2.6E-58 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08355 81d64e671d676c9ebb830f19ec098db3 472 PANTHER PTHR10799 192 466 2.3E-26 T 22-04-2016 APECO1_RS08355 81d64e671d676c9ebb830f19ec098db3 472 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 303 463 1.6E-38 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS08355 81d64e671d676c9ebb830f19ec098db3 472 SUPERFAMILY SSF55073 308 463 8.16E-38 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS07085 3d81a773365499dc7bc5c6607aeed35f 196 Pfam PF00925 GTP cyclohydrolase II 4 170 8.6E-69 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APECO1_RS07085 3d81a773365499dc7bc5c6607aeed35f 196 PANTHER PTHR21327:SF14 1 196 1.3E-146 T 22-04-2016 APECO1_RS07085 3d81a773365499dc7bc5c6607aeed35f 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 7.0E-96 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APECO1_RS07085 3d81a773365499dc7bc5c6607aeed35f 196 PANTHER PTHR21327 1 196 1.3E-146 T 22-04-2016 APECO1_RS07085 3d81a773365499dc7bc5c6607aeed35f 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.843 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APECO1_RS07085 3d81a773365499dc7bc5c6607aeed35f 196 SUPERFAMILY SSF142695 3 173 4.18E-67 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 Gene3D G3DSA:3.40.50.300 12 318 3.3E-112 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 PANTHER PTHR10285:SF7 280 318 2.5E-175 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 PANTHER PTHR10285:SF7 3 264 2.5E-175 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 PANTHER PTHR10285 280 318 2.5E-175 T 22-04-2016 APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 PANTHER PTHR10285 3 264 2.5E-175 T 22-04-2016 APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 SUPERFAMILY SSF52540 12 317 1.6E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 PIRSF PIRSF000545 3 318 6.8E-150 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 92 246 2.7E-14 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 Hamap MF_00215 Pantothenate kinase [coaA]. 1 318 191.409 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APECO1_RS22680 23dba4bf94b15609e6e94304943f7b49 318 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 12 318 3.3E-183 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APECO1_RS20495 90874617e8e91a590be4a7adeb4838ec 332 PANTHER PTHR11091:SF3 1 332 2.0E-232 T 22-04-2016 APECO1_RS20495 90874617e8e91a590be4a7adeb4838ec 332 Gene3D G3DSA:3.30.1370.60 74 170 1.3E-56 T 22-04-2016 APECO1_RS20495 90874617e8e91a590be4a7adeb4838ec 332 Gene3D G3DSA:3.30.1370.60 220 269 1.3E-56 T 22-04-2016 APECO1_RS20495 90874617e8e91a590be4a7adeb4838ec 332 Gene3D G3DSA:3.30.60.50 181 219 5.6E-25 T 22-04-2016 APECO1_RS20495 90874617e8e91a590be4a7adeb4838ec 332 Pfam PF02615 Malate/L-lactate dehydrogenase 3 330 6.7E-103 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS20495 90874617e8e91a590be4a7adeb4838ec 332 Hamap MF_00820 2,3-diketo-L-gulonate reductase [dlgD]. 1 332 89.34 T 22-04-2016 IPR023689 2,3-diketo-L-gulonate reductase GO:0016616|GO:0047559|GO:0055114|GO:0070403 KEGG: 00040+1.1.1.13+1.1.1.130|KEGG: 00053+1.1.1.130|MetaCyc: PWY-6961 APECO1_RS20495 90874617e8e91a590be4a7adeb4838ec 332 PANTHER PTHR11091 1 332 2.0E-232 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS20495 90874617e8e91a590be4a7adeb4838ec 332 Gene3D G3DSA:1.10.1530.10 1 73 7.5E-28 T 22-04-2016 APECO1_RS20495 90874617e8e91a590be4a7adeb4838ec 332 SUPERFAMILY SSF89733 1 332 6.28E-95 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APECO1_RS01310 40fbb6bf16b6d1bff833b380cfe6aac8 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 56 3.2E-36 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS01310 40fbb6bf16b6d1bff833b380cfe6aac8 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 119 133 3.2E-36 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS01310 40fbb6bf16b6d1bff833b380cfe6aac8 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 19 35 3.2E-36 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS01310 40fbb6bf16b6d1bff833b380cfe6aac8 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 68 85 3.2E-36 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS01310 40fbb6bf16b6d1bff833b380cfe6aac8 579 PANTHER PTHR30161 8 579 1.1E-268 T 22-04-2016 APECO1_RS01310 40fbb6bf16b6d1bff833b380cfe6aac8 579 PANTHER PTHR30161:SF1 8 579 1.1E-268 T 22-04-2016 APECO1_RS01310 40fbb6bf16b6d1bff833b380cfe6aac8 579 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 24 47 - T 22-04-2016 IPR025505 FHIPEP conserved site APECO1_RS01310 40fbb6bf16b6d1bff833b380cfe6aac8 579 Pfam PF00771 FHIPEP family 9 569 6.2E-186 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APECO1_RS03525 24e689b003b14408a49a151692cf629c 522 PANTHER PTHR30365 1 310 1.7E-270 T 22-04-2016 APECO1_RS03525 24e689b003b14408a49a151692cf629c 522 PANTHER PTHR30365 376 520 1.7E-270 T 22-04-2016 APECO1_RS03525 24e689b003b14408a49a151692cf629c 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 3.0E-173 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APECO1_RS03525 24e689b003b14408a49a151692cf629c 522 PANTHER PTHR30365:SF0 1 310 1.7E-270 T 22-04-2016 APECO1_RS03525 24e689b003b14408a49a151692cf629c 522 PANTHER PTHR30365:SF0 376 520 1.7E-270 T 22-04-2016 APECO1_RS10275 ad63150fa34f37ab79b16eeb6e8bc75b 468 PANTHER PTHR30288 2 467 4.5E-104 T 22-04-2016 APECO1_RS10275 ad63150fa34f37ab79b16eeb6e8bc75b 468 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 222 452 2.3E-61 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 APECO1_RS10275 ad63150fa34f37ab79b16eeb6e8bc75b 468 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 1.0E-21 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 APECO1_RS10275 ad63150fa34f37ab79b16eeb6e8bc75b 468 PANTHER PTHR30288:SF0 2 467 4.5E-104 T 22-04-2016 APECO1_RS23055 b7e8aa06376d2fc8647a9229efe067f8 165 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 165 25.759 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 APECO1_RS23055 b7e8aa06376d2fc8647a9229efe067f8 165 SUPERFAMILY SSF64288 6 165 1.27E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS23055 b7e8aa06376d2fc8647a9229efe067f8 165 PANTHER PTHR38683 1 165 3.1E-69 T 22-04-2016 APECO1_RS23055 b7e8aa06376d2fc8647a9229efe067f8 165 Pfam PF04345 Chorismate lyase 16 165 5.7E-31 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 APECO1_RS23055 b7e8aa06376d2fc8647a9229efe067f8 165 Gene3D G3DSA:3.40.1410.10 3 165 7.6E-58 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APECO1_RS01885 7a20f6f35981a2320b13a47b07df6929 275 SUPERFAMILY SSF161098 75 258 2.09E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS01885 7a20f6f35981a2320b13a47b07df6929 275 Gene3D G3DSA:1.10.3720.10 71 269 1.5E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS01885 7a20f6f35981a2320b13a47b07df6929 275 PANTHER PTHR30151:SF0 6 275 2.4E-125 T 22-04-2016 APECO1_RS01885 7a20f6f35981a2320b13a47b07df6929 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 2.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS01885 7a20f6f35981a2320b13a47b07df6929 275 PANTHER PTHR30151 6 275 2.4E-125 T 22-04-2016 APECO1_RS15240 c25ea21552bbaff13ad08faccff90f41 319 SUPERFAMILY SSF47240 6 319 6.4E-103 T 22-04-2016 IPR009078 Ferritin-like superfamily APECO1_RS15240 c25ea21552bbaff13ad08faccff90f41 319 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 97 113 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS15240 c25ea21552bbaff13ad08faccff90f41 319 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 7 319 2.3E-143 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APECO1_RS15240 c25ea21552bbaff13ad08faccff90f41 319 PIRSF PIRSF000355 2 316 2.8E-79 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APECO1_RS15240 c25ea21552bbaff13ad08faccff90f41 319 PANTHER PTHR23409 9 319 8.3E-110 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APECO1_RS15240 c25ea21552bbaff13ad08faccff90f41 319 Pfam PF00268 Ribonucleotide reductase, small chain 9 280 6.2E-84 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APECO1_RS15240 c25ea21552bbaff13ad08faccff90f41 319 Gene3D G3DSA:1.10.620.20 7 280 7.9E-90 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 PANTHER PTHR30438 1 355 1.6E-139 T 22-04-2016 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 SUPERFAMILY SSF111369 41 112 3.01E-8 T 22-04-2016 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 Pfam PF13533 Biotin-lipoyl like 48 94 1.3E-10 T 22-04-2016 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 PANTHER PTHR30438:SF1 1 355 1.6E-139 T 22-04-2016 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 Pfam PF13437 HlyD family secretion protein 214 318 5.4E-13 T 22-04-2016 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 Gene3D G3DSA:2.40.50.100 47 80 1.8E-13 T 22-04-2016 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 Gene3D G3DSA:2.40.50.100 211 244 1.8E-13 T 22-04-2016 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 4.1E-6 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 342 4.1E-6 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APECO1_RS19985 05aa135a00990bd35dc50981eed16f9d 355 SUPERFAMILY SSF111369 189 286 3.53E-5 T 22-04-2016 APECO1_RS13135 0238a630d5fa57746485185a0c870961 146 Gene3D G3DSA:1.10.10.700 14 75 3.7E-9 T 22-04-2016 APECO1_RS19005 7db5f0a9ed08d687fd023064e70bb876 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.352 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid APECO1_RS19005 7db5f0a9ed08d687fd023064e70bb876 101 PANTHER PTHR19836 1 101 3.8E-62 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19005 7db5f0a9ed08d687fd023064e70bb876 101 Gene3D G3DSA:4.10.830.10 41 101 2.8E-31 T 22-04-2016 APECO1_RS19005 7db5f0a9ed08d687fd023064e70bb876 101 SUPERFAMILY SSF57716 2 101 8.55E-38 T 22-04-2016 APECO1_RS19005 7db5f0a9ed08d687fd023064e70bb876 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 9.5E-27 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19005 7db5f0a9ed08d687fd023064e70bb876 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PANTHER PTHR24322:SF337 165 195 2.8E-116 T 22-04-2016 APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PANTHER PTHR24322:SF337 17 149 2.8E-116 T 22-04-2016 APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 Gene3D G3DSA:3.40.50.720 5 246 4.8E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PANTHER PTHR24322 165 195 2.8E-116 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PANTHER PTHR24322 17 149 2.8E-116 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 SUPERFAMILY SSF51735 10 243 3.06E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 197 0.0017 T 22-04-2016 APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.3E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 7.3E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 7.3E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 7.3E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 7.3E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 7.3E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS07025 c9206ab83360236166a4267957fe3495 252 Pfam PF00106 short chain dehydrogenase 14 208 1.2E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 SUPERFAMILY SSF55073 237 389 1.57E-17 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 25 144 1.0E-50 T 22-04-2016 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 Pfam PF00672 HAMP domain 151 221 8.3E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 PANTHER PTHR33121:SF13 161 192 1.4E-53 T 22-04-2016 APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 PANTHER PTHR33121:SF13 348 646 1.4E-53 T 22-04-2016 APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 SMART SM00267 220 387 1.5E-40 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 Gene3D G3DSA:3.30.70.270 236 393 5.8E-17 T 22-04-2016 APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 SUPERFAMILY SSF141868 402 647 8.37E-73 T 22-04-2016 IPR001633 EAL domain APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 SMART SM00052 397 642 1.6E-114 T 22-04-2016 IPR001633 EAL domain APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 Pfam PF00563 EAL domain 404 637 2.5E-60 T 22-04-2016 IPR001633 EAL domain APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 Gene3D G3DSA:3.20.20.450 402 646 2.6E-76 T 22-04-2016 IPR001633 EAL domain APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 383 2.6E-11 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 PANTHER PTHR33121 161 192 1.4E-53 T 22-04-2016 APECO1_RS20225 432976059ebfaa750adf59d12568fc0a 651 PANTHER PTHR33121 348 646 1.4E-53 T 22-04-2016 APECO1_RS23665 12f1523c02ba71c88dd1b1871753ca58 186 Pfam PF13708 Domain of unknown function (DUF4942) 88 182 4.0E-23 T 22-04-2016 IPR031339 Domain of unknown function DUF4942 APECO1_RS15780 95c30eab0369fe55382ad95ab8cc7911 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 227 1.2E-7 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APECO1_RS15780 95c30eab0369fe55382ad95ab8cc7911 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 3.8E-28 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APECO1_RS15780 95c30eab0369fe55382ad95ab8cc7911 263 PANTHER PTHR30522 1 263 9.6E-137 T 22-04-2016 APECO1_RS15780 95c30eab0369fe55382ad95ab8cc7911 263 SUPERFAMILY SSF101386 135 236 3.55E-24 T 22-04-2016 APECO1_RS15780 95c30eab0369fe55382ad95ab8cc7911 263 PANTHER PTHR30522:SF0 1 263 9.6E-137 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG APECO1_RS15780 95c30eab0369fe55382ad95ab8cc7911 263 Gene3D G3DSA:1.10.287.1080 19 73 5.8E-7 T 22-04-2016 APECO1_RS15780 95c30eab0369fe55382ad95ab8cc7911 263 Gene3D G3DSA:1.10.287.1080 131 222 2.3E-13 T 22-04-2016 APECO1_RS15780 95c30eab0369fe55382ad95ab8cc7911 263 SUPERFAMILY SSF101386 2 105 2.18E-26 T 22-04-2016 APECO1_RS15780 95c30eab0369fe55382ad95ab8cc7911 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 2.1E-126 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG APECO1_RS06015 8985fa27657b3c79aac7e57b9b1abfd3 131 SUPERFAMILY SSF143749 2 130 6.8E-49 T 22-04-2016 IPR009312 Minor tail protein U-like APECO1_RS06015 8985fa27657b3c79aac7e57b9b1abfd3 131 Pfam PF06141 Phage minor tail protein U 1 129 1.1E-48 T 22-04-2016 IPR009312 Minor tail protein U-like APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.967 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 Gene3D G3DSA:2.30.130.10 250 312 5.0E-29 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 1.3E-57 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 SUPERFAMILY SSF88697 251 310 1.94E-14 T 22-04-2016 IPR015947 PUA-like domain APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 4.2E-22 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 PANTHER PTHR13767 2 309 5.1E-136 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.4E-19 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 PANTHER PTHR13767:SF2 2 309 5.1E-136 T 22-04-2016 APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 2.5E-96 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS18280 a877afa6369bea0714b17ebf98c3e804 314 SUPERFAMILY SSF55120 10 246 7.48E-86 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APECO1_RS23020 efa68eea5b3ecb8cb067d193aa297e33 296 PANTHER PTHR32243 3 296 7.0E-145 T 22-04-2016 APECO1_RS23020 efa68eea5b3ecb8cb067d193aa297e33 296 Gene3D G3DSA:1.10.3720.10 5 283 1.1E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23020 efa68eea5b3ecb8cb067d193aa297e33 296 SUPERFAMILY SSF161098 8 296 1.87E-69 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS23020 efa68eea5b3ecb8cb067d193aa297e33 296 PANTHER PTHR32243:SF4 3 296 7.0E-145 T 22-04-2016 APECO1_RS23020 efa68eea5b3ecb8cb067d193aa297e33 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 287 1.9E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS10420 5972148c0e82168c630cd5564dfe2049 62 Pfam PF10781 Dextransucrase DSRB 1 60 4.2E-36 T 22-04-2016 IPR019717 Dextransucrase DSRB APECO1_RS10420 5972148c0e82168c630cd5564dfe2049 62 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 29.631 T 22-04-2016 IPR019717 Dextransucrase DSRB APECO1_RS07565 4055d612e33061456fa4743702cd8538 178 Pfam PF06576 Protein of unknown function (DUF1133) 1 175 2.3E-101 T 22-04-2016 IPR010557 Protein of unknown function DUF1133 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PANTHER PTHR13697 2 306 3.5E-140 T 22-04-2016 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PIRSF PIRSF000532 1 320 1.8E-131 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.9E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.9E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.9E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.9E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.9E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.9E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.9E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.9E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.9E-82 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 SUPERFAMILY SSF53784 3 309 5.23E-114 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.102 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 Pfam PF00365 Phosphofructokinase 4 276 4.7E-107 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 Gene3D G3DSA:3.40.50.450 2 215 5.0E-76 T 22-04-2016 APECO1_RS22340 9f6606c2e93c6ac75fdc60dff2f54955 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.9E-124 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APECO1_RS06175 4d7432614cc45a456f6b54fa87ba5e9c 125 Gene3D G3DSA:2.160.20.20 27 117 2.2E-7 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.6E-9 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 2 77 5.0E-31 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.331 T 22-04-2016 APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APECO1_RS21325 56b533cc370c1e28d908debdcf79489b 79 PANTHER PTHR10031 1 78 6.8E-25 T 22-04-2016 APECO1_RS02855 2cea1b6b68ea5e724ed0aca33e747cb5 377 Gene3D G3DSA:3.30.1890.10 52 214 8.1E-67 T 22-04-2016 APECO1_RS02855 2cea1b6b68ea5e724ed0aca33e747cb5 377 Gene3D G3DSA:1.10.287.210 215 317 6.4E-46 T 22-04-2016 APECO1_RS02855 2cea1b6b68ea5e724ed0aca33e747cb5 377 Pfam PF02706 Chain length determinant protein 25 173 5.6E-23 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APECO1_RS02855 2cea1b6b68ea5e724ed0aca33e747cb5 377 SUPERFAMILY SSF160355 64 330 5.1E-83 T 22-04-2016 APECO1_RS00840 f820d44147862f2bcd9e5cf6b9f34043 114 SUPERFAMILY SSF89360 8 103 3.34E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS00840 f820d44147862f2bcd9e5cf6b9f34043 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APECO1_RS00840 f820d44147862f2bcd9e5cf6b9f34043 114 PANTHER PTHR10072 1 114 5.2E-50 T 22-04-2016 APECO1_RS00840 f820d44147862f2bcd9e5cf6b9f34043 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 113 5.5E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APECO1_RS00840 f820d44147862f2bcd9e5cf6b9f34043 114 Gene3D G3DSA:2.60.300.12 9 104 9.0E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS00840 f820d44147862f2bcd9e5cf6b9f34043 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 37.123 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 APECO1_RS00840 f820d44147862f2bcd9e5cf6b9f34043 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.9E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 Gene3D G3DSA:3.60.21.10 24 349 2.9E-77 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PANTHER PTHR11575 195 236 1.5E-146 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PANTHER PTHR11575 7 177 1.5E-146 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PANTHER PTHR11575 253 538 1.5E-146 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 SUPERFAMILY SSF55816 349 534 1.57E-48 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 Pfam PF00149 Calcineurin-like phosphoesterase 27 275 1.5E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 Gene3D G3DSA:3.90.780.10 351 535 9.5E-48 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PRINTS PR01607 Apyrase family signature 258 281 3.6E-19 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PRINTS PR01607 Apyrase family signature 472 491 3.6E-19 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PRINTS PR01607 Apyrase family signature 24 42 3.6E-19 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PRINTS PR01607 Apyrase family signature 402 425 3.6E-19 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PRINTS PR01607 Apyrase family signature 223 240 3.6E-19 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 ProSitePatterns PS00786 5'-nucleotidase signature 2. 105 116 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PANTHER PTHR11575:SF27 195 236 1.5E-146 T 22-04-2016 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PANTHER PTHR11575:SF27 7 177 1.5E-146 T 22-04-2016 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 PANTHER PTHR11575:SF27 253 538 1.5E-146 T 22-04-2016 APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 SUPERFAMILY SSF56300 204 360 2.2E-69 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 SUPERFAMILY SSF56300 25 176 2.2E-69 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS22475 d651ce3a62f4cbb184d1a65ff3dc9091 539 Pfam PF02872 5'-nucleotidase, C-terminal domain 361 498 3.3E-35 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APECO1_RS16710 3de6d0f21d64656307f7b3cd91c2ee03 138 SMART SM00732 3 103 1.2E-43 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APECO1_RS16710 3de6d0f21d64656307f7b3cd91c2ee03 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 4.2E-63 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APECO1_RS16710 3de6d0f21d64656307f7b3cd91c2ee03 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 26.638 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APECO1_RS16710 3de6d0f21d64656307f7b3cd91c2ee03 138 Pfam PF03652 Holliday junction resolvase 4 135 5.5E-44 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APECO1_RS16710 3de6d0f21d64656307f7b3cd91c2ee03 138 PANTHER PTHR33317 1 135 4.7E-48 T 22-04-2016 APECO1_RS16710 3de6d0f21d64656307f7b3cd91c2ee03 138 Gene3D G3DSA:3.30.420.140 3 136 1.0E-48 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APECO1_RS16710 3de6d0f21d64656307f7b3cd91c2ee03 138 SUPERFAMILY SSF53098 3 136 6.83E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS16825 4419853779406971e2450869ddd14abd 248 Pfam PF13505 Outer membrane protein beta-barrel domain 9 248 5.5E-23 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel APECO1_RS16825 4419853779406971e2450869ddd14abd 248 Gene3D G3DSA:2.40.160.20 26 248 2.7E-37 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS16825 4419853779406971e2450869ddd14abd 248 SUPERFAMILY SSF56925 26 248 9.16E-28 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS13465 bc3a4bb676d13ba1ca4b145efd6eb9b7 418 PRINTS PR00762 Chloride channel signature 153 172 5.2E-7 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS13465 bc3a4bb676d13ba1ca4b145efd6eb9b7 418 PRINTS PR00762 Chloride channel signature 320 340 5.2E-7 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS13465 bc3a4bb676d13ba1ca4b145efd6eb9b7 418 PRINTS PR00762 Chloride channel signature 103 122 5.2E-7 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS13465 bc3a4bb676d13ba1ca4b145efd6eb9b7 418 Gene3D G3DSA:1.10.3080.10 12 361 1.5E-18 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APECO1_RS13465 bc3a4bb676d13ba1ca4b145efd6eb9b7 418 Hamap MF_01115 Putative ion-transport protein YfeO [yfeO]. 1 411 50.591 T 22-04-2016 IPR022969 Chloride channel YfeO APECO1_RS13465 bc3a4bb676d13ba1ca4b145efd6eb9b7 418 SUPERFAMILY SSF81340 9 403 6.41E-45 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APECO1_RS13465 bc3a4bb676d13ba1ca4b145efd6eb9b7 418 Pfam PF00654 Voltage gated chloride channel 93 391 1.1E-18 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APECO1_RS06210 9d5029004b702bc54723daa4db8308a8 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 3.1E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APECO1_RS06210 9d5029004b702bc54723daa4db8308a8 270 PANTHER PTHR13696 1 258 2.1E-95 T 22-04-2016 APECO1_RS06210 9d5029004b702bc54723daa4db8308a8 270 PIRSF PIRSF003092 1 270 3.6E-100 T 22-04-2016 IPR025501 ATP binding protein MinD APECO1_RS06210 9d5029004b702bc54723daa4db8308a8 270 Gene3D G3DSA:3.40.50.300 1 248 1.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06210 9d5029004b702bc54723daa4db8308a8 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.3E-110 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 APECO1_RS06210 9d5029004b702bc54723daa4db8308a8 270 SUPERFAMILY SSF52540 1 268 2.75E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS06210 9d5029004b702bc54723daa4db8308a8 270 PANTHER PTHR13696:SF1 1 258 2.1E-95 T 22-04-2016 APECO1_RS07850 22d9cb3b1464568390491bd445f51405 201 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 94 4.3E-11 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APECO1_RS08200 bfbeb77b80b0541ad438801006afa8b7 71 Pfam PF10684 Putative biofilm-dependent modulation protein 1 71 2.7E-52 T 22-04-2016 IPR019625 Biofilm-dependent modulation protein Bdm, putative APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 Pfam PF00085 Thioredoxin 5 106 2.0E-34 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 SUPERFAMILY SSF52833 2 108 1.04E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 PIRSF PIRSF000077 2 108 4.8E-45 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.1E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 Gene3D G3DSA:3.40.30.10 2 108 3.5E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 PANTHER PTHR10438 3 109 4.0E-40 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 24 32 3.8E-10 T 22-04-2016 APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 32 41 3.8E-10 T 22-04-2016 APECO1_RS21525 850143d49315e8891aad60bd107000ef 109 PRINTS PR00421 Thioredoxin family signature 72 83 3.8E-10 T 22-04-2016 APECO1_RS20805 63f42b63720ec0b09207687e277ac3b3 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 3.9E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APECO1_RS20805 63f42b63720ec0b09207687e277ac3b3 213 Gene3D G3DSA:3.40.50.2020 7 212 1.9E-83 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS20805 63f42b63720ec0b09207687e277ac3b3 213 PANTHER PTHR19278 1 213 3.6E-149 T 22-04-2016 APECO1_RS20805 63f42b63720ec0b09207687e277ac3b3 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.913 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS20805 63f42b63720ec0b09207687e277ac3b3 213 SUPERFAMILY SSF53271 2 209 1.56E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS20805 63f42b63720ec0b09207687e277ac3b3 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 3.6E-72 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APECO1_RS20805 63f42b63720ec0b09207687e277ac3b3 213 PANTHER PTHR19278:SF36 1 213 3.6E-149 T 22-04-2016 APECO1_RS09340 022800877914d612f2c3b0559e332165 191 Gene3D G3DSA:2.60.120.10 8 112 3.9E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS09340 022800877914d612f2c3b0559e332165 191 Pfam PF05962 HutD 5 175 2.4E-42 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves APECO1_RS09340 022800877914d612f2c3b0559e332165 191 SUPERFAMILY SSF51182 1 182 2.22E-44 T 22-04-2016 IPR011051 RmlC-like cupin domain APECO1_RS09340 022800877914d612f2c3b0559e332165 191 PANTHER PTHR37943 1 191 9.3E-67 T 22-04-2016 APECO1_RS09340 022800877914d612f2c3b0559e332165 191 Hamap MF_01591 Protein Ves [ves]. 1 191 58.94 T 22-04-2016 IPR023482 Uncharacterised protein family Ves APECO1_RS09340 022800877914d612f2c3b0559e332165 191 PANTHER PTHR37943:SF1 1 191 9.3E-67 T 22-04-2016 APECO1_RS15765 3011efad30afdaf4e35e4273466df59e 297 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 29 151 6.0E-35 T 22-04-2016 IPR007621 TPM domain APECO1_RS15765 3011efad30afdaf4e35e4273466df59e 297 PANTHER PTHR30373:SF2 17 297 7.3E-65 T 22-04-2016 APECO1_RS15765 3011efad30afdaf4e35e4273466df59e 297 PANTHER PTHR30373 17 297 7.3E-65 T 22-04-2016 APECO1_RS20780 79ee4cfd255906487645a5993f85b1d1 78 PANTHER PTHR13528 1 70 1.8E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APECO1_RS20780 79ee4cfd255906487645a5993f85b1d1 78 SUPERFAMILY SSF143800 2 77 6.28E-30 T 22-04-2016 APECO1_RS20780 79ee4cfd255906487645a5993f85b1d1 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.2E-27 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS20780 79ee4cfd255906487645a5993f85b1d1 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS20780 79ee4cfd255906487645a5993f85b1d1 78 Pfam PF00830 Ribosomal L28 family 3 62 1.6E-25 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APECO1_RS20780 79ee4cfd255906487645a5993f85b1d1 78 Gene3D G3DSA:2.30.170.40 2 77 7.8E-36 T 22-04-2016 APECO1_RS11655 e11d0e891375b566a4899151d242ebe9 91 ProDom PD029230 GPA 5'REGION GP83 ORF83 GENE GP45 BACTERIOPHAGE SIMILAR ORF4 3 78 4.0E-39 T 22-04-2016 IPR020284 Protein of unknown function CP83 APECO1_RS17040 c767fec98f831b7ee9facbccd484e1b0 294 Pfam PF01926 50S ribosome-binding GTPase 41 142 9.3E-14 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS17040 c767fec98f831b7ee9facbccd484e1b0 294 Gene3D G3DSA:3.40.50.300 21 50 3.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17040 c767fec98f831b7ee9facbccd484e1b0 294 SUPERFAMILY SSF52540 16 166 1.58E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17040 c767fec98f831b7ee9facbccd484e1b0 294 PANTHER PTHR11649 193 223 5.8E-19 T 22-04-2016 APECO1_RS17040 c767fec98f831b7ee9facbccd484e1b0 294 PANTHER PTHR11649 19 176 5.8E-19 T 22-04-2016 APECO1_RS17040 c767fec98f831b7ee9facbccd484e1b0 294 Gene3D G3DSA:3.40.50.300 51 223 9.9E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11490 a66d392e70d0d9439e08bcdcb6f2cc45 226 Pfam PF13672 Protein phosphatase 2C 5 193 1.8E-37 T 22-04-2016 APECO1_RS00150 988372e4d77d4492ba8cc0072b149b8d 304 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 22-04-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 APECO1_RS00150 988372e4d77d4492ba8cc0072b149b8d 304 Hamap MF_01432 Non-specific ribonucleoside hydrolase RihC [rihC]. 1 304 80.111 T 22-04-2016 IPR022976 Non-specific ribonucleoside hydrolase RihC GO:0016798 APECO1_RS00150 988372e4d77d4492ba8cc0072b149b8d 304 PANTHER PTHR12304:SF15 1 300 8.9E-201 T 22-04-2016 APECO1_RS00150 988372e4d77d4492ba8cc0072b149b8d 304 PANTHER PTHR12304 1 300 8.9E-201 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase APECO1_RS00150 988372e4d77d4492ba8cc0072b149b8d 304 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 293 3.4E-70 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APECO1_RS00150 988372e4d77d4492ba8cc0072b149b8d 304 Gene3D G3DSA:3.90.245.10 3 301 2.2E-102 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APECO1_RS00150 988372e4d77d4492ba8cc0072b149b8d 304 SUPERFAMILY SSF53590 3 300 3.79E-96 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APECO1_RS15985 a8ad68c7e82eee921640b3547f942594 550 SUPERFAMILY SSF103088 413 538 2.88E-31 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS15985 a8ad68c7e82eee921640b3547f942594 550 PANTHER PTHR30128:SF11 1 547 1.7E-59 T 22-04-2016 APECO1_RS15985 a8ad68c7e82eee921640b3547f942594 550 Gene3D G3DSA:3.30.1330.60 415 539 5.5E-33 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS15985 a8ad68c7e82eee921640b3547f942594 550 PANTHER PTHR30128 1 547 1.7E-59 T 22-04-2016 APECO1_RS15985 a8ad68c7e82eee921640b3547f942594 550 Pfam PF00691 OmpA family 437 533 3.6E-17 T 22-04-2016 IPR006665 OmpA-like domain APECO1_RS15985 a8ad68c7e82eee921640b3547f942594 550 PRINTS PR01021 OMPA domain signature 483 499 5.5E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS15985 a8ad68c7e82eee921640b3547f942594 550 PRINTS PR01021 OMPA domain signature 468 483 5.5E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APECO1_RS19030 a7d6f728c27ff151616ca9b508e75108 63 SUPERFAMILY SSF46561 1 61 6.41E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19030 a7d6f728c27ff151616ca9b508e75108 63 Pfam PF00831 Ribosomal L29 protein 4 60 5.7E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19030 a7d6f728c27ff151616ca9b508e75108 63 PANTHER PTHR10916 1 63 5.6E-30 T 22-04-2016 APECO1_RS19030 a7d6f728c27ff151616ca9b508e75108 63 Gene3D G3DSA:1.10.287.310 1 60 5.4E-28 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19030 a7d6f728c27ff151616ca9b508e75108 63 PANTHER PTHR10916:SF0 1 63 5.6E-30 T 22-04-2016 APECO1_RS19030 a7d6f728c27ff151616ca9b508e75108 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.3E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19030 a7d6f728c27ff151616ca9b508e75108 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19030 a7d6f728c27ff151616ca9b508e75108 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.555 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS06960 f8480dfdf34db17c8f82bec9c0c2c18e 168 PANTHER PTHR30565:SF1 1 168 6.9E-109 T 22-04-2016 APECO1_RS06960 f8480dfdf34db17c8f82bec9c0c2c18e 168 PANTHER PTHR30565 1 168 6.9E-109 T 22-04-2016 APECO1_RS06960 f8480dfdf34db17c8f82bec9c0c2c18e 168 Gene3D G3DSA:1.20.1260.10 5 160 2.6E-52 T 22-04-2016 IPR012347 Ferritin-related APECO1_RS06960 f8480dfdf34db17c8f82bec9c0c2c18e 168 Pfam PF05974 Domain of unknown function (DUF892) 5 155 1.1E-47 T 22-04-2016 IPR010287 Domain of unknown function DUF892 APECO1_RS06960 f8480dfdf34db17c8f82bec9c0c2c18e 168 SUPERFAMILY SSF47240 5 155 2.11E-44 T 22-04-2016 IPR009078 Ferritin-like superfamily APECO1_RS25655 4143d61ae272747334f577ac7c1ed6fc 450 PANTHER PTHR30092 1 441 1.5E-203 T 22-04-2016 APECO1_RS25655 4143d61ae272747334f577ac7c1ed6fc 450 PIRSF PIRSF004548 1 447 1.3E-181 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD APECO1_RS25655 4143d61ae272747334f577ac7c1ed6fc 450 Pfam PF06123 Inner membrane protein CreD 6 427 1.8E-144 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD APECO1_RS23560 603c045291906201e96d39c9eee49720 253 SUPERFAMILY SSF46689 197 248 2.69E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23560 603c045291906201e96d39c9eee49720 253 Pfam PF12833 Helix-turn-helix domain 169 244 1.1E-13 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS23560 603c045291906201e96d39c9eee49720 253 Gene3D G3DSA:1.10.10.60 197 247 6.7E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23560 603c045291906201e96d39c9eee49720 253 PANTHER PTHR11019 1 252 1.2E-163 T 22-04-2016 APECO1_RS23560 603c045291906201e96d39c9eee49720 253 SMART SM00342 162 244 5.4E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS23560 603c045291906201e96d39c9eee49720 253 PANTHER PTHR11019:SF104 1 252 1.2E-163 T 22-04-2016 APECO1_RS23560 603c045291906201e96d39c9eee49720 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 3.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS23560 603c045291906201e96d39c9eee49720 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 3.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APECO1_RS23560 603c045291906201e96d39c9eee49720 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS21215 e6dba5f4c96ed82b3713490d29aeb745 445 PANTHER PTHR11119:SF9 8 431 2.9E-183 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 APECO1_RS21215 e6dba5f4c96ed82b3713490d29aeb745 445 Pfam PF00860 Permease family 31 404 2.1E-42 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS21215 e6dba5f4c96ed82b3713490d29aeb745 445 PANTHER PTHR11119 8 431 2.9E-183 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS21215 e6dba5f4c96ed82b3713490d29aeb745 445 PIRSF PIRSF005353 5 444 1.3E-177 T 22-04-2016 IPR026033 Purine permease PbuG-like APECO1_RS09865 3182c2e590e2a982200fbc51cfe0daa7 76 Gene3D G3DSA:1.10.1110.10 1 76 3.9E-43 T 22-04-2016 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APECO1_RS09865 3182c2e590e2a982200fbc51cfe0daa7 76 SUPERFAMILY SSF46575 1 76 3.27E-35 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 APECO1_RS09865 3182c2e590e2a982200fbc51cfe0daa7 76 Pfam PF06440 DNA polymerase III, theta subunit 4 71 4.5E-38 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 APECO1_RS09865 3182c2e590e2a982200fbc51cfe0daa7 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 3.0E-38 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 APECO1_RS08130 0e5b3e6850eeb3702718eda83efe8b1a 231 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 154 2.6E-34 T 22-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 APECO1_RS08130 0e5b3e6850eeb3702718eda83efe8b1a 231 Pfam PF02613 Nitrate reductase delta subunit 44 151 4.2E-11 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS08130 0e5b3e6850eeb3702718eda83efe8b1a 231 PANTHER PTHR30598 1 209 1.1E-159 T 22-04-2016 APECO1_RS08130 0e5b3e6850eeb3702718eda83efe8b1a 231 SUPERFAMILY SSF89155 2 156 4.32E-26 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APECO1_RS08130 0e5b3e6850eeb3702718eda83efe8b1a 231 PANTHER PTHR30598:SF5 1 209 1.1E-159 T 22-04-2016 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 PANTHER PTHR35892 6 199 1.6E-64 T 22-04-2016 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 Pfam PF06316 Enterobacterial Ail/Lom protein 1 199 7.2E-123 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 Gene3D G3DSA:2.40.160.20 28 199 1.2E-48 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 187 198 1.2E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 49 61 1.2E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 160 181 1.2E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 96 119 1.2E-28 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 SUPERFAMILY SSF56925 31 199 2.49E-28 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 191 199 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS25465 da8ad4ab6dcb652ca291075c657fd5a2 199 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 50 58 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APECO1_RS04315 e68d8391f1fcbb6baf76473a7d0781c2 435 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 52 424 5.5E-125 T 22-04-2016 IPR013397 CRISPR-associated protein Csy1 APECO1_RS04315 e68d8391f1fcbb6baf76473a7d0781c2 435 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 53 414 6.2E-124 T 22-04-2016 IPR013397 CRISPR-associated protein Csy1 APECO1_RS18085 6f422004eaafd05ece8684bf23c63fc4 381 SUPERFAMILY SSF110738 1 375 1.02E-141 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS18085 6f422004eaafd05ece8684bf23c63fc4 381 PIRSF PIRSF006078 1 377 8.1E-141 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS18085 6f422004eaafd05ece8684bf23c63fc4 381 Pfam PF02595 Glycerate kinase family 3 373 1.0E-149 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS18085 6f422004eaafd05ece8684bf23c63fc4 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.4E-174 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS18085 6f422004eaafd05ece8684bf23c63fc4 381 Gene3D G3DSA:3.90.1510.10 42 274 2.4E-100 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APECO1_RS18085 6f422004eaafd05ece8684bf23c63fc4 381 PANTHER PTHR21599 1 380 1.6E-279 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APECO1_RS18085 6f422004eaafd05ece8684bf23c63fc4 381 PANTHER PTHR21599:SF4 1 380 1.6E-279 T 22-04-2016 APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 SUPERFAMILY SSF52440 380 510 1.21E-38 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 Pfam PF05257 CHAP domain 52 149 1.2E-11 T 22-04-2016 IPR007921 CHAP domain APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 PANTHER PTHR30094:SF4 1 160 0.0 T 22-04-2016 APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 PANTHER PTHR30094:SF4 250 619 0.0 T 22-04-2016 APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 PANTHER PTHR30094 1 160 0.0 T 22-04-2016 APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 PANTHER PTHR30094 250 619 0.0 T 22-04-2016 APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 SUPERFAMILY SSF54001 10 197 8.14E-61 T 22-04-2016 APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 SUPERFAMILY SSF56059 497 614 3.07E-77 T 22-04-2016 APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 SUPERFAMILY SSF56059 205 379 3.07E-77 T 22-04-2016 APECO1_RS17370 924652c5ef63ffdbd809a58536ffa0b6 619 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 250 615 6.1E-67 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 Gene3D G3DSA:1.20.1250.20 244 449 2.8E-26 T 22-04-2016 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 Gene3D G3DSA:1.20.1250.20 20 206 1.2E-29 T 22-04-2016 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 SUPERFAMILY SSF103473 13 448 1.57E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 PRINTS PR00171 Sugar transporter signature 109 128 2.0E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 PRINTS PR00171 Sugar transporter signature 262 272 2.0E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 PRINTS PR00171 Sugar transporter signature 352 373 2.0E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 PRINTS PR00171 Sugar transporter signature 375 387 2.0E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 PRINTS PR00171 Sugar transporter signature 26 36 2.0E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 Pfam PF00083 Sugar (and other) transporter 18 450 1.4E-141 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 323 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 PANTHER PTHR23500:SF119 9 460 2.9E-237 T 22-04-2016 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 447 1.5E-152 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APECO1_RS16680 db993383da93cd8338663c1629a104d4 464 PANTHER PTHR23500 9 460 2.9E-237 T 22-04-2016 APECO1_RS06455 c5f276bdacf4b2a1af8b91f1e633c60b 231 SUPERFAMILY SSF110857 47 161 2.62E-10 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APECO1_RS06455 c5f276bdacf4b2a1af8b91f1e633c60b 231 PANTHER PTHR12192 1 227 2.9E-143 T 22-04-2016 IPR006840 ChaC-like protein APECO1_RS06455 c5f276bdacf4b2a1af8b91f1e633c60b 231 PANTHER PTHR12192:SF9 1 227 2.9E-143 T 22-04-2016 APECO1_RS06455 c5f276bdacf4b2a1af8b91f1e633c60b 231 Pfam PF04752 ChaC-like protein 47 215 4.7E-56 T 22-04-2016 IPR006840 ChaC-like protein APECO1_RS06455 c5f276bdacf4b2a1af8b91f1e633c60b 231 Gene3D G3DSA:3.10.490.10 41 209 7.0E-47 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APECO1_RS06970 03f0fc062a26572bee76c46c01d55ad7 59 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 5.0E-9 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat APECO1_RS06970 03f0fc062a26572bee76c46c01d55ad7 59 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 3.4E-9 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat APECO1_RS06970 03f0fc062a26572bee76c46c01d55ad7 59 PANTHER PTHR36569 1 56 4.1E-32 T 22-04-2016 APECO1_RS06970 03f0fc062a26572bee76c46c01d55ad7 59 PANTHER PTHR36569:SF1 1 56 4.1E-32 T 22-04-2016 APECO1_RS11335 82b18d472babf79a0c6f7c73093e156d 297 PANTHER PTHR22572 5 284 2.6E-203 T 22-04-2016 APECO1_RS11335 82b18d472babf79a0c6f7c73093e156d 297 TIGRFAM TIGR01105 galF: regulatory protein GalF 1 297 1.2E-208 T 22-04-2016 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit GO:0006011|GO:0030234 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|UniPathway: UPA00030|UniPathway: UPA00215 APECO1_RS11335 82b18d472babf79a0c6f7c73093e156d 297 SUPERFAMILY SSF53448 2 283 7.66E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11335 82b18d472babf79a0c6f7c73093e156d 297 Gene3D G3DSA:3.90.550.10 4 276 5.9E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11335 82b18d472babf79a0c6f7c73093e156d 297 Pfam PF00483 Nucleotidyl transferase 5 274 3.3E-21 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APECO1_RS11335 82b18d472babf79a0c6f7c73093e156d 297 PANTHER PTHR22572:SF118 5 284 2.6E-203 T 22-04-2016 APECO1_RS11770 5ccceb8bd4f521dcd408189ca59f33c7 272 PANTHER PTHR34135:SF2 38 272 6.6E-99 T 22-04-2016 APECO1_RS11770 5ccceb8bd4f521dcd408189ca59f33c7 272 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 71 109 - T 22-04-2016 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 APECO1_RS11770 5ccceb8bd4f521dcd408189ca59f33c7 272 SMART SM00641 67 178 2.2E-45 T 22-04-2016 IPR018077 Glycoside hydrolase, family 25 subgroup APECO1_RS11770 5ccceb8bd4f521dcd408189ca59f33c7 272 Gene3D G3DSA:3.20.20.80 65 267 3.9E-67 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS11770 5ccceb8bd4f521dcd408189ca59f33c7 272 SUPERFAMILY SSF51445 64 267 3.66E-54 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS11770 5ccceb8bd4f521dcd408189ca59f33c7 272 PANTHER PTHR34135 38 272 6.6E-99 T 22-04-2016 APECO1_RS11770 5ccceb8bd4f521dcd408189ca59f33c7 272 Pfam PF01183 Glycosyl hydrolases family 25 70 245 1.1E-54 T 22-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 APECO1_RS00795 046dd68572b9dc076c7f5bb41e488546 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 22.541 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 APECO1_RS00795 046dd68572b9dc076c7f5bb41e488546 176 PANTHER PTHR35561 1 176 4.1E-58 T 22-04-2016 APECO1_RS00795 046dd68572b9dc076c7f5bb41e488546 176 Gene3D G3DSA:3.90.1140.10 5 176 1.7E-50 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase APECO1_RS00795 046dd68572b9dc076c7f5bb41e488546 176 PANTHER PTHR35561:SF1 1 176 4.1E-58 T 22-04-2016 APECO1_RS00795 046dd68572b9dc076c7f5bb41e488546 176 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 174 1.7E-44 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 APECO1_RS00795 046dd68572b9dc076c7f5bb41e488546 176 Pfam PF02834 LigT like Phosphoesterase 11 89 2.2E-13 T 22-04-2016 IPR014051 Phosphoesterase, HXTX APECO1_RS00795 046dd68572b9dc076c7f5bb41e488546 176 Pfam PF02834 LigT like Phosphoesterase 92 166 8.0E-8 T 22-04-2016 IPR014051 Phosphoesterase, HXTX APECO1_RS00795 046dd68572b9dc076c7f5bb41e488546 176 SUPERFAMILY SSF55144 6 174 1.31E-45 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase APECO1_RS26280 e185b8b5c93a5673bbe43d5cdf008e52 58 Pfam PF01225 Mur ligase family, catalytic domain 1 57 6.6E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APECO1_RS26280 e185b8b5c93a5673bbe43d5cdf008e52 58 PANTHER PTHR23135:SF5 1 58 2.7E-20 T 22-04-2016 APECO1_RS26280 e185b8b5c93a5673bbe43d5cdf008e52 58 SUPERFAMILY SSF51984 1 58 5.1E-16 T 22-04-2016 APECO1_RS26280 e185b8b5c93a5673bbe43d5cdf008e52 58 Gene3D G3DSA:3.40.50.720 1 58 6.7E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS26280 e185b8b5c93a5673bbe43d5cdf008e52 58 PANTHER PTHR23135 1 58 2.7E-20 T 22-04-2016 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 Pfam PF00128 Alpha amylase, catalytic domain 178 494 1.4E-87 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 SUPERFAMILY SSF51445 118 531 1.36E-88 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 SMART SM00642 128 522 1.1E-88 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 Gene3D G3DSA:3.20.20.80 118 523 9.4E-107 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 SUPERFAMILY SSF51011 531 604 3.65E-9 T 22-04-2016 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 PANTHER PTHR10357 175 580 3.7E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 PANTHER PTHR10357 35 140 3.7E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 Gene3D G3DSA:2.60.40.1180 526 569 8.3E-8 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 PIRSF PIRSF036918 1 604 8.0E-245 T 22-04-2016 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 PANTHER PTHR10357:SF144 175 580 3.7E-251 T 22-04-2016 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 PANTHER PTHR10357:SF144 35 140 3.7E-251 T 22-04-2016 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 2 107 1.4E-8 T 22-04-2016 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 APECO1_RS02050 bb12944113a5a01857bfaf62b9fc34c4 605 SUPERFAMILY SSF81296 14 103 4.9E-8 T 22-04-2016 IPR014756 Immunoglobulin E-set APECO1_RS12520 c20907b7ce1a32a8a8bc7b4164745cf3 267 PANTHER PTHR30502:SF5 1 266 6.0E-229 T 22-04-2016 APECO1_RS12520 c20907b7ce1a32a8a8bc7b4164745cf3 267 Gene3D G3DSA:3.20.20.60 5 255 2.4E-81 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS12520 c20907b7ce1a32a8a8bc7b4164745cf3 267 SUPERFAMILY SSF51621 4 255 5.65E-83 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APECO1_RS12520 c20907b7ce1a32a8a8bc7b4164745cf3 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 244 1.0E-68 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 APECO1_RS12520 c20907b7ce1a32a8a8bc7b4164745cf3 267 Hamap MF_01290 2-keto-3-deoxy-L-rhamnonate aldolase [rhmA]. 1 267 75.029 T 22-04-2016 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase GO:0016832 KEGG: 00051+4.1.2.53|MetaCyc: PWY-6713 APECO1_RS12520 c20907b7ce1a32a8a8bc7b4164745cf3 267 PANTHER PTHR30502 1 266 6.0E-229 T 22-04-2016 APECO1_RS04275 7cdbd0652d1ebbc49aa2374abd369af3 330 PANTHER PTHR38785 17 330 7.3E-128 T 22-04-2016 APECO1_RS04275 7cdbd0652d1ebbc49aa2374abd369af3 330 Pfam PF04393 Protein of unknown function (DUF535) 48 325 1.5E-100 T 22-04-2016 IPR007488 Protein of unknown function DUF535 APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 75 402 9.5E-60 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 Gene3D G3DSA:3.40.50.1100 180 438 1.6E-45 T 22-04-2016 APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 9 438 4.2E-245 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 PANTHER PTHR10314 155 441 5.3E-219 T 22-04-2016 APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 PANTHER PTHR10314 44 131 5.3E-219 T 22-04-2016 APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 442 280.285 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 SUPERFAMILY SSF53686 74 435 2.47E-55 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 PANTHER PTHR10314:SF9 155 441 5.3E-219 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 APECO1_RS13345 1e91fcbeffead7b0f3e8f5c00f81e0bd 442 PANTHER PTHR10314:SF9 44 131 5.3E-219 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 APECO1_RS17265 0256f1ad517e34581d1a27dd025f04fa 560 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 552 1.5E-235 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APECO1_RS17265 0256f1ad517e34581d1a27dd025f04fa 560 Pfam PF02652 L-lactate permease 16 550 6.2E-206 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APECO1_RS17265 0256f1ad517e34581d1a27dd025f04fa 560 PANTHER PTHR30003 3 560 0.0 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APECO1_RS17265 0256f1ad517e34581d1a27dd025f04fa 560 PANTHER PTHR30003:SF6 3 560 0.0 T 22-04-2016 APECO1_RS13585 b87677210c07fa6debc5c606c7c078b3 332 PANTHER PTHR38685:SF1 2 332 3.7E-69 T 22-04-2016 APECO1_RS13585 b87677210c07fa6debc5c606c7c078b3 332 SMART SM00771 195 324 5.6E-75 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APECO1_RS13585 b87677210c07fa6debc5c606c7c078b3 332 Gene3D G3DSA:3.30.1400.10 194 329 4.2E-62 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APECO1_RS13585 b87677210c07fa6debc5c606c7c078b3 332 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 197 332 5.0E-76 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APECO1_RS13585 b87677210c07fa6debc5c606c7c078b3 332 PANTHER PTHR38685 2 332 3.7E-69 T 22-04-2016 APECO1_RS13585 b87677210c07fa6debc5c606c7c078b3 332 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 324 2.5E-125 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 APECO1_RS13585 b87677210c07fa6debc5c606c7c078b3 332 SUPERFAMILY SSF64383 196 329 3.92E-48 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APECO1_RS13585 b87677210c07fa6debc5c606c7c078b3 332 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 198 321 2.7E-47 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APECO1_RS13585 b87677210c07fa6debc5c606c7c078b3 332 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 326 27.463 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 168 1.8E-23 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 2.4E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 SMART SM00525 191 211 3.5E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 SMART SM00478 39 190 2.7E-56 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 Gene3D G3DSA:1.10.1670.10 123 224 1.6E-39 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 PANTHER PTHR10359 5 350 2.4E-122 T 22-04-2016 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 SUPERFAMILY SSF55811 220 344 1.57E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 Pfam PF00633 Helix-hairpin-helix motif 100 127 4.9E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 Gene3D G3DSA:1.10.340.30 22 122 1.9E-45 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 277 2.3E-133 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 Gene3D G3DSA:3.90.79.10 229 345 5.7E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 SUPERFAMILY SSF48150 3 225 1.57E-78 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APECO1_RS16775 d79811150a3a771d7d7afd9fb3f707d9 350 Pfam PF14815 NUDIX domain 234 343 1.2E-23 T 22-04-2016 IPR029119 MutY, C-terminal APECO1_RS15635 2093671f94f6223b67ac99e85dc7abe3 103 PANTHER PTHR37485 2 103 4.7E-50 T 22-04-2016 APECO1_RS15635 2093671f94f6223b67ac99e85dc7abe3 103 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.886 T 22-04-2016 IPR023081 Cell division protein FtsB APECO1_RS15635 2093671f94f6223b67ac99e85dc7abe3 103 Pfam PF04977 Septum formation initiator 11 89 3.0E-30 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 APECO1_RS15635 2093671f94f6223b67ac99e85dc7abe3 103 PANTHER PTHR37485:SF1 2 103 4.7E-50 T 22-04-2016 APECO1_RS23060 b71ec81a46233749b4911a8201c59971 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site APECO1_RS23060 b71ec81a46233749b4911a8201c59971 290 Pfam PF01040 UbiA prenyltransferase family 28 271 3.8E-68 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APECO1_RS23060 b71ec81a46233749b4911a8201c59971 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.375 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 APECO1_RS23060 b71ec81a46233749b4911a8201c59971 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 3.7E-112 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 APECO1_RS23060 b71ec81a46233749b4911a8201c59971 290 PANTHER PTHR11048 9 289 9.3E-93 T 22-04-2016 APECO1_RS10010 8575a98c6800ed15b59dbd075911c726 131 Gene3D G3DSA:1.20.120.550 4 127 4.4E-23 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain APECO1_RS10010 8575a98c6800ed15b59dbd075911c726 131 PANTHER PTHR35814:SF2 1 131 7.7E-75 T 22-04-2016 APECO1_RS10010 8575a98c6800ed15b59dbd075911c726 131 SUPERFAMILY SSF161084 4 127 7.59E-31 T 22-04-2016 APECO1_RS10010 8575a98c6800ed15b59dbd075911c726 131 Pfam PF01124 MAPEG family 3 120 3.9E-26 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein APECO1_RS10010 8575a98c6800ed15b59dbd075911c726 131 PANTHER PTHR35814 1 131 7.7E-75 T 22-04-2016 APECO1_RS15540 780281db93fb4a0bfedafcc836ae330f 142 SUPERFAMILY SSF50331 1 71 2.92E-21 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS15540 780281db93fb4a0bfedafcc836ae330f 142 SUPERFAMILY SSF50331 47 138 4.37E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APECO1_RS15540 780281db93fb4a0bfedafcc836ae330f 142 PANTHER PTHR30432 1 142 6.0E-15 T 22-04-2016 APECO1_RS15540 780281db93fb4a0bfedafcc836ae330f 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 73 140 3.9E-19 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 APECO1_RS15540 780281db93fb4a0bfedafcc836ae330f 142 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 2 69 1.5E-23 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 APECO1_RS15540 780281db93fb4a0bfedafcc836ae330f 142 Pfam PF03459 TOBE domain 4 66 2.3E-16 T 22-04-2016 IPR005116 Transport-associated OB, type 1 APECO1_RS15540 780281db93fb4a0bfedafcc836ae330f 142 Pfam PF03459 TOBE domain 76 136 2.7E-15 T 22-04-2016 IPR005116 Transport-associated OB, type 1 APECO1_RS15540 780281db93fb4a0bfedafcc836ae330f 142 Gene3D G3DSA:2.40.50.100 72 141 1.0E-25 T 22-04-2016 APECO1_RS15540 780281db93fb4a0bfedafcc836ae330f 142 Gene3D G3DSA:2.40.50.100 1 69 2.6E-29 T 22-04-2016 APECO1_RS15450 abaffd4704123a7acdfbba5e53d527ce 485 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS15450 abaffd4704123a7acdfbba5e53d527ce 485 Pfam PF00367 phosphotransferase system, EIIB 12 43 1.5E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APECO1_RS15450 abaffd4704123a7acdfbba5e53d527ce 485 Pfam PF02378 Phosphotransferase system, EIIC 113 396 5.5E-41 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS15450 abaffd4704123a7acdfbba5e53d527ce 485 PANTHER PTHR30175 1 470 9.4E-243 T 22-04-2016 APECO1_RS15450 abaffd4704123a7acdfbba5e53d527ce 485 PANTHER PTHR30175:SF9 1 470 9.4E-243 T 22-04-2016 APECO1_RS15450 abaffd4704123a7acdfbba5e53d527ce 485 Gene3D G3DSA:3.30.1360.60 4 82 2.7E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS15450 abaffd4704123a7acdfbba5e53d527ce 485 SUPERFAMILY SSF55604 8 82 1.57E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APECO1_RS15450 abaffd4704123a7acdfbba5e53d527ce 485 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 154 441 8.4E-88 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 Gene3D G3DSA:3.30.1340.10 1 87 4.0E-32 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 SUPERFAMILY SSF55594 1 87 2.62E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 PANTHER PTHR33705:SF2 1 89 1.3E-35 T 22-04-2016 APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 5.1E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 PANTHER PTHR33705 1 89 1.3E-35 T 22-04-2016 APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.1E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.9E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.9E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.9E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APECO1_RS19965 9e14ba383a996501de7e3faf46b4058d 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APECO1_RS24095 1a2db30f641aca3976c08c2977d4de46 158 PANTHER PTHR35335 1 158 1.2E-44 T 22-04-2016 APECO1_RS24095 1a2db30f641aca3976c08c2977d4de46 158 PANTHER PTHR35335:SF1 1 158 1.2E-44 T 22-04-2016 APECO1_RS24095 1a2db30f641aca3976c08c2977d4de46 158 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 2.7E-33 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 APECO1_RS17500 92ec1f4dd546dcdc1bd9fc0bf0408bf3 85 PIRSF PIRSF002855 1 82 1.1E-25 T 22-04-2016 IPR016367 Murein-lipoprotein APECO1_RS17500 92ec1f4dd546dcdc1bd9fc0bf0408bf3 85 SUPERFAMILY SSF58042 24 72 2.35E-18 T 22-04-2016 APECO1_RS17500 92ec1f4dd546dcdc1bd9fc0bf0408bf3 85 Pfam PF04728 Lipoprotein leucine-zipper 25 71 3.0E-13 T 22-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 APECO1_RS17500 92ec1f4dd546dcdc1bd9fc0bf0408bf3 85 Gene3D G3DSA:1.20.5.190 25 69 2.1E-6 T 22-04-2016 APECO1_RS17500 92ec1f4dd546dcdc1bd9fc0bf0408bf3 85 PANTHER PTHR38763 1 85 3.6E-28 T 22-04-2016 APECO1_RS19060 a9eb05a116a704d31881e542cf92b1be 100 Gene3D G3DSA:3.30.70.330 6 98 3.3E-34 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 APECO1_RS19060 a9eb05a116a704d31881e542cf92b1be 100 SUPERFAMILY SSF54189 6 97 2.66E-30 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS19060 a9eb05a116a704d31881e542cf92b1be 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.603 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19060 a9eb05a116a704d31881e542cf92b1be 100 Pfam PF00276 Ribosomal protein L23 9 95 6.0E-31 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19060 a9eb05a116a704d31881e542cf92b1be 100 PANTHER PTHR11620 9 95 1.1E-33 T 22-04-2016 APECO1_RS19060 a9eb05a116a704d31881e542cf92b1be 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site APECO1_RS10860 5a80255d4c9d06a0e4914065c0d93fcc 366 Gene3D G3DSA:3.40.50.720 4 139 6.9E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS10860 5a80255d4c9d06a0e4914065c0d93fcc 366 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 6 348 3.0E-160 T 22-04-2016 IPR010091 Thiazolinyl imide reductase APECO1_RS10860 5a80255d4c9d06a0e4914065c0d93fcc 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 5.5E-24 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APECO1_RS10860 5a80255d4c9d06a0e4914065c0d93fcc 366 SUPERFAMILY SSF51735 8 140 5.79E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS10860 5a80255d4c9d06a0e4914065c0d93fcc 366 PIRSF PIRSF017494 4 363 7.3E-153 T 22-04-2016 IPR010091 Thiazolinyl imide reductase APECO1_RS09310 9fe9e7dc7d38213722999837f6e40370 452 PANTHER PTHR33989:SF4 1 445 3.9E-212 T 22-04-2016 APECO1_RS09310 9fe9e7dc7d38213722999837f6e40370 452 PIRSF PIRSF006351 1 448 5.1E-135 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APECO1_RS09310 9fe9e7dc7d38213722999837f6e40370 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 1.3E-177 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APECO1_RS09310 9fe9e7dc7d38213722999837f6e40370 452 PANTHER PTHR33989 1 445 3.9E-212 T 22-04-2016 APECO1_RS09310 9fe9e7dc7d38213722999837f6e40370 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 1.3E-177 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 APECO1_RS09310 9fe9e7dc7d38213722999837f6e40370 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 5.0E-47 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS04520 801ec6b75e6406649a63d14039e9e053 141 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 7 140 3.2E-51 T 22-04-2016 IPR020000 Bacteriophage P2, LysB APECO1_RS20550 9f91d51a90cd5d7e930019d72d7e2736 431 PANTHER PTHR13504 93 417 2.6E-47 T 22-04-2016 APECO1_RS20550 9f91d51a90cd5d7e930019d72d7e2736 431 Gene3D G3DSA:1.10.3290.10 118 351 3.4E-50 T 22-04-2016 IPR003812 Fido domain APECO1_RS20550 9f91d51a90cd5d7e930019d72d7e2736 431 Pfam PF02661 Fic/DOC family 177 282 1.3E-21 T 22-04-2016 IPR003812 Fido domain APECO1_RS20550 9f91d51a90cd5d7e930019d72d7e2736 431 SUPERFAMILY SSF140931 156 347 1.57E-30 T 22-04-2016 IPR003812 Fido domain APECO1_RS20550 9f91d51a90cd5d7e930019d72d7e2736 431 PANTHER PTHR13504:SF32 93 417 2.6E-47 T 22-04-2016 APECO1_RS20550 9f91d51a90cd5d7e930019d72d7e2736 431 Gene3D G3DSA:1.10.10.10 365 425 7.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS08505 45aacf72e5fda31efce3f62660fd1722 113 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 1 113 4.0E-53 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 APECO1_RS08505 45aacf72e5fda31efce3f62660fd1722 113 Pfam PF06932 Protein of unknown function (DUF1283) 32 113 4.3E-41 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 APECO1_RS08505 45aacf72e5fda31efce3f62660fd1722 113 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 2 113 28.774 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 APECO1_RS12130 990ab059445aa701a831425baf5917ec 393 Pfam PF07690 Major Facilitator Superfamily 21 356 6.1E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS12130 990ab059445aa701a831425baf5917ec 393 SUPERFAMILY SSF103473 19 390 8.89E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS12130 990ab059445aa701a831425baf5917ec 393 PANTHER PTHR23535 4 392 6.8E-227 T 22-04-2016 APECO1_RS12130 990ab059445aa701a831425baf5917ec 393 PANTHER PTHR23535:SF2 4 392 6.8E-227 T 22-04-2016 APECO1_RS12130 990ab059445aa701a831425baf5917ec 393 Gene3D G3DSA:1.20.1250.20 19 199 6.1E-19 T 22-04-2016 APECO1_RS12130 990ab059445aa701a831425baf5917ec 393 Gene3D G3DSA:1.20.1250.20 213 391 2.0E-24 T 22-04-2016 APECO1_RS12130 990ab059445aa701a831425baf5917ec 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 9.3E-198 T 22-04-2016 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 APECO1_RS19545 1c758c5f97c3e168d999d0f18073241d 797 Pfam PF00343 Carbohydrate phosphorylase 93 794 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS19545 1c758c5f97c3e168d999d0f18073241d 797 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 9 794 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS19545 1c758c5f97c3e168d999d0f18073241d 797 SUPERFAMILY SSF53756 8 795 1.65E-296 T 22-04-2016 APECO1_RS19545 1c758c5f97c3e168d999d0f18073241d 797 PIRSF PIRSF000460 1 797 1.3E-205 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS19545 1c758c5f97c3e168d999d0f18073241d 797 PANTHER PTHR11468:SF10 1 793 0.0 T 22-04-2016 APECO1_RS19545 1c758c5f97c3e168d999d0f18073241d 797 PANTHER PTHR11468 1 793 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS19545 1c758c5f97c3e168d999d0f18073241d 797 Gene3D G3DSA:3.40.50.2000 7 462 8.2E-184 T 22-04-2016 APECO1_RS19545 1c758c5f97c3e168d999d0f18073241d 797 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APECO1_RS19545 1c758c5f97c3e168d999d0f18073241d 797 Gene3D G3DSA:3.40.50.2000 463 780 5.8E-136 T 22-04-2016 APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 Gene3D G3DSA:2.60.40.420 317 399 3.2E-5 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 PANTHER PTHR11709:SF2 21 400 2.4E-94 T 22-04-2016 APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 Gene3D G3DSA:2.60.40.420 2 135 3.3E-33 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 PANTHER PTHR11709 21 400 2.4E-94 T 22-04-2016 APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 SUPERFAMILY SSF49503 2 132 8.26E-31 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 Pfam PF00394 Multicopper oxidase 168 257 6.0E-6 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 SUPERFAMILY SSF49503 137 253 2.55E-33 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 SUPERFAMILY SSF49503 339 361 2.55E-33 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 Gene3D G3DSA:2.60.40.420 136 286 1.7E-31 T 22-04-2016 IPR008972 Cupredoxin APECO1_RS27345 549ff616f393e593fe77c110f6ecfe85 401 Pfam PF07732 Multicopper oxidase 20 130 1.7E-31 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 APECO1_RS00055 2b2804d1b8bad6755db274e833875c50 45 Pfam PF12035 Protein of unknown function (DUF3521) 6 40 2.7E-19 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 Pfam PF02446 4-alpha-glucanotransferase 148 664 2.6E-131 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 PANTHER PTHR32438 56 561 4.8E-295 T 22-04-2016 APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 PANTHER PTHR32438 580 691 4.8E-295 T 22-04-2016 APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 Gene3D G3DSA:3.20.20.80 612 686 4.0E-164 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 Gene3D G3DSA:3.20.20.80 140 573 4.0E-164 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 PANTHER PTHR32438:SF5 56 561 4.8E-295 T 22-04-2016 APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 PANTHER PTHR32438:SF5 580 691 4.8E-295 T 22-04-2016 APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 SUPERFAMILY SSF51445 142 570 2.11E-147 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 SUPERFAMILY SSF51445 608 681 2.11E-147 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APECO1_RS19540 0d23f2632f008b3d96e92469014da5fd 694 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 100 685 1.2E-302 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APECO1_RS00710 bb30f8dc7f2ca5a4edc693686b64edab 409 Gene3D G3DSA:3.20.20.370 202 371 1.0E-21 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS00710 bb30f8dc7f2ca5a4edc693686b64edab 409 SUPERFAMILY SSF88713 191 376 5.0E-29 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APECO1_RS00710 bb30f8dc7f2ca5a4edc693686b64edab 409 PANTHER PTHR32027:SF8 64 404 5.1E-149 T 22-04-2016 APECO1_RS00710 bb30f8dc7f2ca5a4edc693686b64edab 409 Pfam PF01522 Polysaccharide deacetylase 228 366 2.4E-21 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS00710 bb30f8dc7f2ca5a4edc693686b64edab 409 PANTHER PTHR32027 64 404 5.1E-149 T 22-04-2016 APECO1_RS13725 84bf298fba77b7f76a9878a834a62ded 408 PANTHER PTHR40089 2 408 1.9E-182 T 22-04-2016 APECO1_RS13725 84bf298fba77b7f76a9878a834a62ded 408 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 391 1.5E-141 T 22-04-2016 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 APECO1_RS13725 84bf298fba77b7f76a9878a834a62ded 408 PIRSF PIRSF019466 1 408 2.2E-128 T 22-04-2016 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 PANTHER PTHR23115 74 356 5.2E-70 T 22-04-2016 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 PANTHER PTHR23115 15 54 5.2E-70 T 22-04-2016 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 231 1.7E-42 T 22-04-2016 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 214 1.6E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 4.7E-213 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 SUPERFAMILY SSF50465 336 435 4.22E-30 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 SUPERFAMILY SSF52540 23 236 1.48E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 Gene3D G3DSA:3.40.50.300 21 236 9.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 Gene3D G3DSA:2.40.30.10 244 359 4.9E-17 T 22-04-2016 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 SUPERFAMILY SSF50447 244 328 2.43E-22 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 53.819 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 6.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 6.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 6.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 6.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS15650 1567e6e72667499e0ec34d7b33be9289 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 6.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 22 153 8.3E-29 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 PRINTS PR00095 Anthranilate synthase component I signature 385 399 2.0E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 PRINTS PR00095 Anthranilate synthase component I signature 400 414 2.0E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 PRINTS PR00095 Anthranilate synthase component I signature 291 304 2.0E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 PRINTS PR00095 Anthranilate synthase component I signature 305 318 2.0E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 446 5.1E-143 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 Pfam PF00425 chorismate binding enzyme 190 443 4.3E-93 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 PANTHER PTHR11236 29 453 5.2E-172 T 22-04-2016 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 SUPERFAMILY SSF56322 4 452 4.45E-148 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 Gene3D G3DSA:3.60.120.10 11 452 6.5E-156 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS09690 d8808ce40e49af07533832d261ec50a7 453 PANTHER PTHR11236:SF18 29 453 5.2E-172 T 22-04-2016 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 5.0E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 2.2E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 2.2E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 Pfam PF13377 Periplasmic binding protein-like domain 180 339 2.9E-34 T 22-04-2016 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 Gene3D G3DSA:1.10.260.40 11 62 3.3E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 SUPERFAMILY SSF47413 9 68 7.51E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 Gene3D G3DSA:3.40.50.2300 63 183 9.5E-40 T 22-04-2016 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 SUPERFAMILY SSF53822 70 340 3.62E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 PANTHER PTHR30146 10 339 4.0E-103 T 22-04-2016 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 Gene3D G3DSA:3.40.50.2300 184 320 1.3E-42 T 22-04-2016 APECO1_RS23130 cf9499f77037cff40f71e36130649765 344 SMART SM00354 10 80 1.8E-29 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APECO1_RS10405 ad19a7639463b8497f82a7cafc7e6d6c 89 PANTHER PTHR34040 1 89 1.0E-41 T 22-04-2016 APECO1_RS10405 ad19a7639463b8497f82a7cafc7e6d6c 89 PIRSF PIRSF004669 1 89 6.1E-34 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APECO1_RS10405 ad19a7639463b8497f82a7cafc7e6d6c 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 4.1E-35 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 APECO1_RS10405 ad19a7639463b8497f82a7cafc7e6d6c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.9E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APECO1_RS10405 ad19a7639463b8497f82a7cafc7e6d6c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.9E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APECO1_RS10405 ad19a7639463b8497f82a7cafc7e6d6c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.9E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APECO1_RS10405 ad19a7639463b8497f82a7cafc7e6d6c 89 PANTHER PTHR34040:SF2 1 89 1.0E-41 T 22-04-2016 APECO1_RS10405 ad19a7639463b8497f82a7cafc7e6d6c 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.3E-30 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APECO1_RS15375 c207c3da507b348d9882c89a131a1511 165 Pfam PF02464 Competence-damaged protein 8 160 1.2E-60 T 22-04-2016 IPR008136 CinA, C-terminal APECO1_RS15375 c207c3da507b348d9882c89a131a1511 165 SUPERFAMILY SSF142433 3 161 9.81E-60 T 22-04-2016 IPR008136 CinA, C-terminal APECO1_RS15375 c207c3da507b348d9882c89a131a1511 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 158 3.6E-64 T 22-04-2016 IPR008136 CinA, C-terminal APECO1_RS15375 c207c3da507b348d9882c89a131a1511 165 Gene3D G3DSA:3.90.950.20 3 163 1.3E-62 T 22-04-2016 IPR008136 CinA, C-terminal APECO1_RS15375 c207c3da507b348d9882c89a131a1511 165 PANTHER PTHR13939 1 161 1.5E-84 T 22-04-2016 APECO1_RS12625 d4d901b4b7fa997428f481f8393a6c70 431 PANTHER PTHR11236:SF3 27 431 5.5E-142 T 22-04-2016 APECO1_RS12625 d4d901b4b7fa997428f481f8393a6c70 431 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 430 42.324 T 22-04-2016 APECO1_RS12625 d4d901b4b7fa997428f481f8393a6c70 431 PANTHER PTHR11236 27 431 5.5E-142 T 22-04-2016 APECO1_RS12625 d4d901b4b7fa997428f481f8393a6c70 431 SUPERFAMILY SSF56322 12 428 2.35E-104 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS12625 d4d901b4b7fa997428f481f8393a6c70 431 Gene3D G3DSA:3.60.120.10 38 429 4.1E-80 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APECO1_RS12625 d4d901b4b7fa997428f481f8393a6c70 431 Pfam PF00425 chorismate binding enzyme 169 420 1.4E-62 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APECO1_RS12625 d4d901b4b7fa997428f481f8393a6c70 431 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 93 427 2.8E-108 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 APECO1_RS06945 dc5c27aabc60985767cdadb1f20c35cc 218 Gene3D G3DSA:3.40.50.150 50 176 2.9E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS06945 dc5c27aabc60985767cdadb1f20c35cc 218 Pfam PF08242 Methyltransferase domain 54 151 5.3E-7 T 22-04-2016 IPR013217 Methyltransferase type 12 APECO1_RS06945 dc5c27aabc60985767cdadb1f20c35cc 218 PIRSF PIRSF011491 1 218 8.8E-100 T 22-04-2016 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted APECO1_RS06945 dc5c27aabc60985767cdadb1f20c35cc 218 SUPERFAMILY SSF53335 7 193 1.58E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS05085 1dcd6d92651c44a7234a28522f3bf66b 57 PANTHER PTHR36569 1 53 5.3E-34 T 22-04-2016 APECO1_RS05085 1dcd6d92651c44a7234a28522f3bf66b 57 PANTHER PTHR36569:SF4 1 53 5.3E-34 T 22-04-2016 APECO1_RS05085 1dcd6d92651c44a7234a28522f3bf66b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 9.2E-10 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat APECO1_RS05085 1dcd6d92651c44a7234a28522f3bf66b 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 1.8E-9 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat APECO1_RS03870 f5066ab59742eb9412b348eba17bcecf 101 PANTHER PTHR11079 33 97 1.1E-13 T 22-04-2016 APECO1_RS03870 f5066ab59742eb9412b348eba17bcecf 101 PANTHER PTHR11079:SF50 33 97 1.1E-13 T 22-04-2016 APECO1_RS03870 f5066ab59742eb9412b348eba17bcecf 101 Pfam PF08719 Domain of unknown function (DUF1768) 34 97 1.3E-16 T 22-04-2016 IPR012816 Conserved hypothetical protein CHP02464 APECO1_RS03870 f5066ab59742eb9412b348eba17bcecf 101 SUPERFAMILY SSF143990 35 100 1.96E-23 T 22-04-2016 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 4.2E-272 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 PIRSF PIRSF000429 9 436 1.2E-126 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 PANTHER PTHR18919:SF5 10 436 4.4E-198 T 22-04-2016 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 Gene3D G3DSA:3.40.47.10 15 134 3.4E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 Gene3D G3DSA:3.40.47.10 221 299 3.4E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 Pfam PF02803 Thiolase, C-terminal domain 297 434 6.2E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 SUPERFAMILY SSF53901 297 434 9.93E-33 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 PANTHER PTHR18919 10 436 4.4E-198 T 22-04-2016 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 SUPERFAMILY SSF53901 15 295 7.62E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 1.2E-135 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 1.6E-60 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 75.341 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 Gene3D G3DSA:3.40.47.10 175 220 7.4E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 Gene3D G3DSA:3.40.47.10 302 435 7.4E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APECO1_RS12995 a80d0182e250647bd02030e019d780fe 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APECO1_RS12500 eb004e683a7b9a66e41fea597479ff86 419 PIRSF PIRSF000141 1 418 2.0E-172 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APECO1_RS12500 eb004e683a7b9a66e41fea597479ff86 419 PANTHER PTHR11632 1 87 2.2E-13 T 22-04-2016 APECO1_RS12500 eb004e683a7b9a66e41fea597479ff86 419 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 411 1.3E-177 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APECO1_RS12500 eb004e683a7b9a66e41fea597479ff86 419 Pfam PF00890 FAD binding domain 4 399 1.2E-60 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APECO1_RS12500 eb004e683a7b9a66e41fea597479ff86 419 SUPERFAMILY SSF51905 249 416 5.08E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12500 eb004e683a7b9a66e41fea597479ff86 419 SUPERFAMILY SSF51905 1 74 5.08E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12500 eb004e683a7b9a66e41fea597479ff86 419 Gene3D G3DSA:3.50.50.60 1 53 8.6E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12500 eb004e683a7b9a66e41fea597479ff86 419 Gene3D G3DSA:3.50.50.60 254 415 8.6E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS12500 eb004e683a7b9a66e41fea597479ff86 419 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 415 49.996 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APECO1_RS19385 ad64cec4eb7f19a532f05cb4e3f501d8 225 PIRSF PIRSF001461 1 225 7.8E-107 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS19385 ad64cec4eb7f19a532f05cb4e3f501d8 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 7.5E-92 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS19385 ad64cec4eb7f19a532f05cb4e3f501d8 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.9E-96 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS19385 ad64cec4eb7f19a532f05cb4e3f501d8 225 PANTHER PTHR11749 2 222 2.4E-142 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS19385 ad64cec4eb7f19a532f05cb4e3f501d8 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS19385 ad64cec4eb7f19a532f05cb4e3f501d8 225 PANTHER PTHR11749:SF7 2 222 2.4E-142 T 22-04-2016 APECO1_RS19385 ad64cec4eb7f19a532f05cb4e3f501d8 225 Gene3D G3DSA:3.20.20.70 1 221 6.3E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS19385 ad64cec4eb7f19a532f05cb4e3f501d8 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APECO1_RS19385 ad64cec4eb7f19a532f05cb4e3f501d8 225 SUPERFAMILY SSF51366 3 218 1.04E-76 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 SUPERFAMILY SSF52833 126 162 2.57E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 SUPERFAMILY SSF52833 42 99 2.57E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 SUPERFAMILY SSF47616 177 324 1.24E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 7.3E-23 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 PIRSF PIRSF015753 5 324 6.7E-134 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 257 9.5E-13 T 22-04-2016 APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 PANTHER PTHR32419:SF6 1 324 1.6E-183 T 22-04-2016 APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 PANTHER PTHR32419 1 324 1.6E-183 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 Gene3D G3DSA:3.40.30.10 42 178 2.8E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS18010 44f1908d6120eb5129ad2141710d0b02 328 Gene3D G3DSA:1.20.1050.10 179 288 1.1E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS04695 f54b03733b9accf07b649354c09ff99e 60 SUPERFAMILY SSF158997 1 55 6.93E-20 T 22-04-2016 APECO1_RS04695 f54b03733b9accf07b649354c09ff99e 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 25.895 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 APECO1_RS04695 f54b03733b9accf07b649354c09ff99e 60 PANTHER PTHR33505 1 60 3.3E-28 T 22-04-2016 APECO1_RS04695 f54b03733b9accf07b649354c09ff99e 60 Gene3D G3DSA:2.20.25.10 8 59 5.3E-24 T 22-04-2016 APECO1_RS04695 f54b03733b9accf07b649354c09ff99e 60 Pfam PF03966 Trm112p-like protein 2 41 1.5E-8 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 APECO1_RS25570 1b06316904f018d26a6acc83a7195174 443 Pfam PF07804 HipA-like C-terminal domain 322 429 3.2E-8 T 22-04-2016 IPR012893 HipA-like, C-terminal APECO1_RS25570 1b06316904f018d26a6acc83a7195174 443 PANTHER PTHR37419 43 442 4.2E-204 T 22-04-2016 APECO1_RS25570 1b06316904f018d26a6acc83a7195174 443 Pfam PF07805 HipA-like N-terminal domain 201 280 4.5E-7 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 APECO1_RS25570 1b06316904f018d26a6acc83a7195174 443 PANTHER PTHR37419:SF2 43 442 4.2E-204 T 22-04-2016 APECO1_RS20900 a2b3336de09ad40a6529d7ed48322122 104 PANTHER PTHR30505 1 99 1.0E-35 T 22-04-2016 APECO1_RS20900 a2b3336de09ad40a6529d7ed48322122 104 SUPERFAMILY SSF52794 2 99 1.06E-32 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS20900 a2b3336de09ad40a6529d7ed48322122 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 90 4.5E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS20900 a2b3336de09ad40a6529d7ed48322122 104 Gene3D G3DSA:3.40.50.2300 1 99 6.2E-37 T 22-04-2016 APECO1_RS20900 a2b3336de09ad40a6529d7ed48322122 104 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 1.9E-29 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APECO1_RS24520 76ce23c1cda75ca129242c0b792833a0 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 2.7E-75 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ APECO1_RS24520 76ce23c1cda75ca129242c0b792833a0 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 1.5E-92 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ APECO1_RS12635 c1128b0ec3de53892191f41ca308e4be 153 SUPERFAMILY SSF55729 1 150 2.96E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS12635 c1128b0ec3de53892191f41ca308e4be 153 PANTHER PTHR23091 1 152 2.9E-54 T 22-04-2016 APECO1_RS12635 c1128b0ec3de53892191f41ca308e4be 153 Pfam PF13673 Acetyltransferase (GNAT) domain 43 149 8.6E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS12635 c1128b0ec3de53892191f41ca308e4be 153 Gene3D G3DSA:3.40.630.30 2 148 1.9E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS12635 c1128b0ec3de53892191f41ca308e4be 153 PANTHER PTHR23091:SF275 1 152 2.9E-54 T 22-04-2016 APECO1_RS04295 3cfca27767229b6aaa0738a6149bd45a 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 101 28.512 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS APECO1_RS04295 3cfca27767229b6aaa0738a6149bd45a 106 PANTHER PTHR33473 1 106 9.9E-48 T 22-04-2016 APECO1_RS04295 3cfca27767229b6aaa0738a6149bd45a 106 Gene3D G3DSA:3.30.1390.10 4 106 2.7E-45 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APECO1_RS04295 3cfca27767229b6aaa0738a6149bd45a 106 SUPERFAMILY SSF54736 22 105 1.99E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APECO1_RS04295 3cfca27767229b6aaa0738a6149bd45a 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.0E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 APECO1_RS24820 941cd14121ec7e4ec267d8925b8bb5ed 200 PANTHER PTHR30349 3 196 3.8E-138 T 22-04-2016 APECO1_RS24820 941cd14121ec7e4ec267d8925b8bb5ed 200 Pfam PF00589 Phage integrase family 12 180 1.8E-51 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS24820 941cd14121ec7e4ec267d8925b8bb5ed 200 SUPERFAMILY SSF56349 7 190 5.59E-43 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS24820 941cd14121ec7e4ec267d8925b8bb5ed 200 Gene3D G3DSA:1.10.443.10 12 179 7.3E-39 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS24820 941cd14121ec7e4ec267d8925b8bb5ed 200 PANTHER PTHR30349:SF31 3 196 3.8E-138 T 22-04-2016 APECO1_RS04700 f8e6fbfc4e7c9915632998cd6546bca8 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.8E-137 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APECO1_RS04700 f8e6fbfc4e7c9915632998cd6546bca8 248 PANTHER PTHR21485 1 248 3.6E-127 T 22-04-2016 APECO1_RS04700 f8e6fbfc4e7c9915632998cd6546bca8 248 PANTHER PTHR21485:SF4 1 248 3.6E-127 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APECO1_RS04700 f8e6fbfc4e7c9915632998cd6546bca8 248 Pfam PF02348 Cytidylyltransferase 4 221 1.9E-72 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APECO1_RS04700 f8e6fbfc4e7c9915632998cd6546bca8 248 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.454 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APECO1_RS04700 f8e6fbfc4e7c9915632998cd6546bca8 248 Gene3D G3DSA:3.90.550.10 1 247 3.0E-86 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS04700 f8e6fbfc4e7c9915632998cd6546bca8 248 SUPERFAMILY SSF53448 3 245 1.15E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS24100 f4e1c8d7f8da15609baced43f30f4697 418 PANTHER PTHR11785:SF415 1 410 2.4E-167 T 22-04-2016 APECO1_RS24100 f4e1c8d7f8da15609baced43f30f4697 418 PANTHER PTHR11785 1 410 2.4E-167 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS24100 f4e1c8d7f8da15609baced43f30f4697 418 PIRSF PIRSF006060 1 412 1.9E-58 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS24100 f4e1c8d7f8da15609baced43f30f4697 418 Pfam PF13520 Amino acid permease 8 369 1.5E-29 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS17665 05397835251618755d36d09c85e6b600 493 Gene3D G3DSA:1.20.1600.10 15 434 2.9E-95 T 22-04-2016 APECO1_RS17665 05397835251618755d36d09c85e6b600 493 Pfam PF02321 Outer membrane efflux protein 232 427 2.0E-33 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS17665 05397835251618755d36d09c85e6b600 493 Pfam PF02321 Outer membrane efflux protein 27 209 3.5E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS17665 05397835251618755d36d09c85e6b600 493 PANTHER PTHR30026:SF3 1 453 5.7E-178 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APECO1_RS17665 05397835251618755d36d09c85e6b600 493 PANTHER PTHR30026 1 453 5.7E-178 T 22-04-2016 APECO1_RS17665 05397835251618755d36d09c85e6b600 493 SUPERFAMILY SSF56954 25 447 1.7E-99 T 22-04-2016 APECO1_RS17665 05397835251618755d36d09c85e6b600 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 443 9.7E-145 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APECO1_RS18370 66467dd515a8ec1579ad2689f8543f63 321 Pfam PF00892 EamA-like transporter family 159 291 8.6E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS18370 66467dd515a8ec1579ad2689f8543f63 321 Pfam PF00892 EamA-like transporter family 7 142 1.1E-28 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS18370 66467dd515a8ec1579ad2689f8543f63 321 PANTHER PTHR22911:SF55 1 316 4.6E-164 T 22-04-2016 APECO1_RS18370 66467dd515a8ec1579ad2689f8543f63 321 PANTHER PTHR22911 1 316 4.6E-164 T 22-04-2016 APECO1_RS18370 66467dd515a8ec1579ad2689f8543f63 321 SUPERFAMILY SSF103481 41 143 2.62E-12 T 22-04-2016 APECO1_RS19990 2ae6af58ab8b48e5d34a16c592dc9207 350 Pfam PF10951 Protein of unknown function (DUF2776) 1 347 9.1E-151 T 22-04-2016 IPR021240 Protein of unknown function DUF2776 APECO1_RS04325 f9c12e1adc5aa0a3eb072a747698d1c7 333 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 9 331 6.8E-133 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 APECO1_RS04325 f9c12e1adc5aa0a3eb072a747698d1c7 333 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 10 329 1.8E-145 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 APECO1_RS25380 5a3c83872a1779adc123cf645d6a8b95 700 Pfam PF05876 Phage terminase large subunit (GpA) 34 644 1.7E-176 T 22-04-2016 IPR008866 Bacteriophage lambda, GpA APECO1_RS25380 5a3c83872a1779adc123cf645d6a8b95 700 PANTHER PTHR34413 7 644 0.0 T 22-04-2016 APECO1_RS25380 5a3c83872a1779adc123cf645d6a8b95 700 PANTHER PTHR34413:SF2 7 644 0.0 T 22-04-2016 APECO1_RS17105 aa35b3c0bea2782aa4182cb15fe0e5c9 281 Pfam PF13708 Domain of unknown function (DUF4942) 88 275 2.1E-58 T 22-04-2016 IPR031339 Domain of unknown function DUF4942 APECO1_RS16785 ee31cf06d57de054e16dddc079d38ce5 359 PANTHER PTHR21666 175 359 2.2E-55 T 22-04-2016 APECO1_RS16785 ee31cf06d57de054e16dddc079d38ce5 359 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 213 241 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APECO1_RS16785 ee31cf06d57de054e16dddc079d38ce5 359 Pfam PF11873 Domain of unknown function (DUF3393) 3 191 1.9E-76 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal APECO1_RS16785 ee31cf06d57de054e16dddc079d38ce5 359 SUPERFAMILY SSF53955 191 357 1.24E-36 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS16785 ee31cf06d57de054e16dddc079d38ce5 359 Pfam PF01464 Transglycosylase SLT domain 196 319 1.3E-32 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APECO1_RS16785 ee31cf06d57de054e16dddc079d38ce5 359 Gene3D G3DSA:1.10.530.10 187 358 3.2E-41 T 22-04-2016 APECO1_RS16785 ee31cf06d57de054e16dddc079d38ce5 359 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 358 66.899 T 22-04-2016 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 APECO1_RS16785 ee31cf06d57de054e16dddc079d38ce5 359 PANTHER PTHR21666:SF224 175 359 2.2E-55 T 22-04-2016 APECO1_RS25035 5e81342a39009b76101a7dd31ab702d6 426 PANTHER PTHR38442 1 421 2.0E-173 T 22-04-2016 APECO1_RS25035 5e81342a39009b76101a7dd31ab702d6 426 Pfam PF04286 Protein of unknown function (DUF445) 44 417 8.0E-108 T 22-04-2016 IPR007383 Protein of unknown function DUF445 APECO1_RS15225 769ae15e7d32e4f9c4bfe2c535bf870f 81 Pfam PF00462 Glutaredoxin 3 57 2.7E-13 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APECO1_RS15225 769ae15e7d32e4f9c4bfe2c535bf870f 81 PANTHER PTHR34386:SF3 1 80 1.3E-47 T 22-04-2016 APECO1_RS15225 769ae15e7d32e4f9c4bfe2c535bf870f 81 PANTHER PTHR34386 1 80 1.3E-47 T 22-04-2016 APECO1_RS15225 769ae15e7d32e4f9c4bfe2c535bf870f 81 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 8.0E-34 T 22-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 APECO1_RS15225 769ae15e7d32e4f9c4bfe2c535bf870f 81 SUPERFAMILY SSF52833 1 72 3.66E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS15225 769ae15e7d32e4f9c4bfe2c535bf870f 81 Gene3D G3DSA:3.40.30.10 1 75 6.4E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS24790 2891f8bace3c4ab8b3a1f70ccb7f3772 290 PIRSF PIRSF030850 1 290 3.7E-143 T 22-04-2016 IPR011396 Uncharacterised conserved protein UCP030850 APECO1_RS24790 2891f8bace3c4ab8b3a1f70ccb7f3772 290 Pfam PF13391 HNH endonuclease 182 236 5.0E-8 T 22-04-2016 IPR003615 HNH nuclease APECO1_RS22220 ed29993cf859e7bc56aba9437df4de6f 211 Gene3D G3DSA:1.20.950.20 1 209 3.8E-71 T 22-04-2016 APECO1_RS22220 ed29993cf859e7bc56aba9437df4de6f 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 3.3E-22 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APECO1_RS22220 ed29993cf859e7bc56aba9437df4de6f 211 PANTHER PTHR30074 1 211 1.9E-97 T 22-04-2016 APECO1_RS22220 ed29993cf859e7bc56aba9437df4de6f 211 SUPERFAMILY SSF81342 4 205 9.28E-55 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APECO1_RS22220 ed29993cf859e7bc56aba9437df4de6f 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 3.5E-66 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 APECO1_RS20110 e25a18e4e2d0e0dd36fe4d411dcce164 215 PRINTS PR01837 MgtC/SapB protein signature 92 116 5.2E-43 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APECO1_RS20110 e25a18e4e2d0e0dd36fe4d411dcce164 215 PRINTS PR01837 MgtC/SapB protein signature 65 87 5.2E-43 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APECO1_RS20110 e25a18e4e2d0e0dd36fe4d411dcce164 215 PRINTS PR01837 MgtC/SapB protein signature 12 31 5.2E-43 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APECO1_RS20110 e25a18e4e2d0e0dd36fe4d411dcce164 215 PRINTS PR01837 MgtC/SapB protein signature 31 49 5.2E-43 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APECO1_RS20110 e25a18e4e2d0e0dd36fe4d411dcce164 215 PANTHER PTHR33778 1 207 2.5E-65 T 22-04-2016 APECO1_RS20110 e25a18e4e2d0e0dd36fe4d411dcce164 215 Pfam PF02308 MgtC family 9 136 1.1E-36 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 APECO1_RS03890 abff3b4bc0880312dc5caa4a683d877d 86 SUPERFAMILY SSF159871 3 86 4.71E-25 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS03890 abff3b4bc0880312dc5caa4a683d877d 86 PANTHER PTHR34156:SF1 2 86 1.5E-51 T 22-04-2016 APECO1_RS03890 abff3b4bc0880312dc5caa4a683d877d 86 Gene3D G3DSA:3.30.1660.10 18 86 1.5E-27 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS03890 abff3b4bc0880312dc5caa4a683d877d 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 1.8E-16 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS03890 abff3b4bc0880312dc5caa4a683d877d 86 PANTHER PTHR34156 2 86 1.5E-51 T 22-04-2016 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 5.7E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 8.0E-166 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 PANTHER PTHR32248:SF4 1 477 1.3E-192 T 22-04-2016 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 392 403 2.0E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 186 203 2.0E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 376 388 2.0E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 PRINTS PR00045 Sigma-54 factor signature 450 468 2.0E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 2.2E-62 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 PIRSF PIRSF000774 1 477 3.3E-153 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 1.0E-70 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APECO1_RS18460 8ae15e9195e9e36653306e096f916693 477 PANTHER PTHR32248 1 477 1.3E-192 T 22-04-2016 APECO1_RS16685 7d40f78bb6215229d196155a493c84f3 165 Pfam PF10263 SprT-like family 19 163 2.0E-27 T 22-04-2016 IPR006640 SprT-like APECO1_RS16685 7d40f78bb6215229d196155a493c84f3 165 Hamap MF_00746 Protein SprT [sprT]. 12 165 41.469 T 22-04-2016 IPR023483 Uncharacterised protein family SprT APECO1_RS16685 7d40f78bb6215229d196155a493c84f3 165 SMART SM00731 16 165 2.9E-62 T 22-04-2016 IPR006640 SprT-like APECO1_RS16685 7d40f78bb6215229d196155a493c84f3 165 PANTHER PTHR38773 2 163 6.8E-96 T 22-04-2016 APECO1_RS08085 d52d57ccca85909155cbc5d2b659d506 253 SUPERFAMILY SSF55486 25 231 1.76E-5 T 22-04-2016 APECO1_RS08085 d52d57ccca85909155cbc5d2b659d506 253 SMART SM01351 48 230 1.8E-69 T 22-04-2016 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 APECO1_RS08085 d52d57ccca85909155cbc5d2b659d506 253 Gene3D G3DSA:3.40.390.10 23 230 2.7E-23 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APECO1_RS15640 ed8c3c8822b99245f1fc16f04fafc15f 107 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 6 107 3.0E-52 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 APECO1_RS15640 ed8c3c8822b99245f1fc16f04fafc15f 107 Pfam PF12084 Protein of unknown function (DUF3561) 1 107 3.0E-46 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 APECO1_RS24730 8a3198a08c3043736c517d2711479048 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 5.5E-116 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 APECO1_RS24730 8a3198a08c3043736c517d2711479048 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 2.3E-72 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APECO1_RS24730 8a3198a08c3043736c517d2711479048 366 PANTHER PTHR33529 2 363 4.1E-139 T 22-04-2016 APECO1_RS24730 8a3198a08c3043736c517d2711479048 366 PANTHER PTHR33529:SF2 2 363 4.1E-139 T 22-04-2016 APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 282 5.4E-125 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 Pfam PF08544 GHMP kinases C terminal 213 263 2.2E-6 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 Pfam PF00288 GHMP kinases N terminal domain 91 148 1.3E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.728 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 PANTHER PTHR20861:SF2 1 280 3.2E-110 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 SUPERFAMILY SSF54211 2 162 1.59E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 PANTHER PTHR20861 1 280 3.2E-110 T 22-04-2016 APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 Gene3D G3DSA:3.30.230.10 4 163 1.4E-54 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 SUPERFAMILY SSF55060 164 281 6.98E-37 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 PIRSF PIRSF010376 1 283 1.6E-85 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APECO1_RS06400 460d36e0bd23b4d8f2ebf96f9310bd88 283 Gene3D G3DSA:3.30.70.890 166 281 1.6E-45 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APECO1_RS07190 7b1f50fbc9eeb38883ab3222adb10ef5 296 SUPERFAMILY SSF161098 90 277 7.19E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07190 7b1f50fbc9eeb38883ab3222adb10ef5 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 2.6E-9 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APECO1_RS07190 7b1f50fbc9eeb38883ab3222adb10ef5 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 1.1E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS07190 7b1f50fbc9eeb38883ab3222adb10ef5 296 PANTHER PTHR30465:SF49 7 292 3.1E-192 T 22-04-2016 APECO1_RS07190 7b1f50fbc9eeb38883ab3222adb10ef5 296 PANTHER PTHR30465 7 292 3.1E-192 T 22-04-2016 APECO1_RS07190 7b1f50fbc9eeb38883ab3222adb10ef5 296 Gene3D G3DSA:1.10.3720.10 86 290 2.4E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS08540 a3bff14ae917a6d95a73fb381b4e8a1b 284 PANTHER PTHR38095:SF1 2 284 3.2E-204 T 22-04-2016 APECO1_RS08540 a3bff14ae917a6d95a73fb381b4e8a1b 284 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 274 2.1E-114 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 APECO1_RS08540 a3bff14ae917a6d95a73fb381b4e8a1b 284 PANTHER PTHR38095 2 284 3.2E-204 T 22-04-2016 APECO1_RS14570 7dda67e38c2e5d06a29078629c1613ce 293 Gene3D G3DSA:1.10.10.10 1 79 2.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS14570 7dda67e38c2e5d06a29078629c1613ce 293 Pfam PF03466 LysR substrate binding domain 87 288 1.7E-41 T 22-04-2016 IPR005119 LysR, substrate-binding APECO1_RS14570 7dda67e38c2e5d06a29078629c1613ce 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APECO1_RS14570 7dda67e38c2e5d06a29078629c1613ce 293 PANTHER PTHR30126:SF5 1 290 3.7E-151 T 22-04-2016 APECO1_RS14570 7dda67e38c2e5d06a29078629c1613ce 293 PANTHER PTHR30126 1 290 3.7E-151 T 22-04-2016 APECO1_RS14570 7dda67e38c2e5d06a29078629c1613ce 293 Gene3D G3DSA:3.40.190.10 80 195 6.0E-19 T 22-04-2016 APECO1_RS14570 7dda67e38c2e5d06a29078629c1613ce 293 Gene3D G3DSA:3.40.190.10 196 259 4.0E-11 T 22-04-2016 APECO1_RS14570 7dda67e38c2e5d06a29078629c1613ce 293 SUPERFAMILY SSF46785 1 84 4.73E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS14570 7dda67e38c2e5d06a29078629c1613ce 293 SUPERFAMILY SSF53850 87 290 5.07E-38 T 22-04-2016 APECO1_RS04330 e4e87692ea763aaeed8d02406fdedb44 184 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 184 8.3E-55 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 APECO1_RS04330 e4e87692ea763aaeed8d02406fdedb44 184 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 184 6.4E-62 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 SUPERFAMILY SSF56235 12 429 2.74E-149 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Gene3D G3DSA:3.20.20.70 811 1198 9.2E-163 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Gene3D G3DSA:3.60.20.10 12 433 2.2E-171 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Pfam PF01493 GXGXG motif 1236 1419 7.7E-75 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 8.9E-177 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Gene3D G3DSA:3.20.20.70 437 776 6.5E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 SUPERFAMILY SSF51395 434 1191 1.79E-248 T 22-04-2016 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 PANTHER PTHR11938:SF1 1 1476 0.0 T 22-04-2016 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 4.0E-158 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 PANTHER PTHR11938 1 1476 0.0 T 22-04-2016 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Pfam PF04898 Glutamate synthase central domain 457 737 2.6E-105 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 Gene3D G3DSA:2.160.20.60 1211 1465 3.3E-97 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APECO1_RS18510 043a39a13b3787d3ab61d4cdf87c1f8f 1486 SUPERFAMILY SSF69336 1211 1465 1.57E-88 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APECO1_RS07005 8c594a998eee7b31f51598408074e2db 206 PANTHER PTHR17490 1 205 1.3E-104 T 22-04-2016 APECO1_RS07005 8c594a998eee7b31f51598408074e2db 206 Gene3D G3DSA:3.90.870.10 2 203 3.2E-65 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APECO1_RS07005 8c594a998eee7b31f51598408074e2db 206 SUPERFAMILY SSF55821 1 204 2.66E-66 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APECO1_RS07005 8c594a998eee7b31f51598408074e2db 206 Pfam PF01300 Telomere recombination 23 198 2.8E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 APECO1_RS07005 8c594a998eee7b31f51598408074e2db 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 204 6.8E-80 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 APECO1_RS07005 8c594a998eee7b31f51598408074e2db 206 PANTHER PTHR17490:SF7 1 205 1.3E-104 T 22-04-2016 APECO1_RS02820 cc00cfa1c7c6580930ea0ba83485fe2f 209 PANTHER PTHR38096 1 209 8.9E-77 T 22-04-2016 APECO1_RS02820 cc00cfa1c7c6580930ea0ba83485fe2f 209 Gene3D G3DSA:3.90.470.20 112 194 3.1E-7 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS02820 cc00cfa1c7c6580930ea0ba83485fe2f 209 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 106 201 1.9E-13 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS02820 cc00cfa1c7c6580930ea0ba83485fe2f 209 PRINTS PR01399 Enterobactin synthetase component D signature 76 94 5.8E-22 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 APECO1_RS02820 cc00cfa1c7c6580930ea0ba83485fe2f 209 PRINTS PR01399 Enterobactin synthetase component D signature 149 165 5.8E-22 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 APECO1_RS02820 cc00cfa1c7c6580930ea0ba83485fe2f 209 PRINTS PR01399 Enterobactin synthetase component D signature 47 67 5.8E-22 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 APECO1_RS02820 cc00cfa1c7c6580930ea0ba83485fe2f 209 SUPERFAMILY SSF56214 105 207 1.92E-14 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS02820 cc00cfa1c7c6580930ea0ba83485fe2f 209 Gene3D G3DSA:3.90.470.20 90 111 4.4E-4 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS15935 2cde06cb79b74e5d579b7142da071887 147 Gene3D G3DSA:3.90.1010.10 4 146 5.7E-49 T 22-04-2016 APECO1_RS15935 2cde06cb79b74e5d579b7142da071887 147 PANTHER PTHR12735 1 147 4.0E-55 T 22-04-2016 APECO1_RS15935 2cde06cb79b74e5d579b7142da071887 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 144 1.3E-73 T 22-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE APECO1_RS15935 2cde06cb79b74e5d579b7142da071887 147 PANTHER PTHR12735:SF11 1 147 4.0E-55 T 22-04-2016 APECO1_RS15935 2cde06cb79b74e5d579b7142da071887 147 Pfam PF02657 Fe-S metabolism associated domain 23 140 1.4E-38 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 APECO1_RS15935 2cde06cb79b74e5d579b7142da071887 147 SUPERFAMILY SSF82649 3 146 6.28E-44 T 22-04-2016 APECO1_RS25080 64ebf211c2df241d1e2cc73dd08a01e7 67 Pfam PF04328 Protein of unknown function (DUF466) 5 67 8.0E-28 T 22-04-2016 IPR007423 Protein of unknown function DUF466 APECO1_RS25080 64ebf211c2df241d1e2cc73dd08a01e7 67 PANTHER PTHR38453:SF2 1 67 7.3E-62 T 22-04-2016 APECO1_RS25080 64ebf211c2df241d1e2cc73dd08a01e7 67 PANTHER PTHR38453 1 67 7.3E-62 T 22-04-2016 APECO1_RS04800 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 2.2E-73 T 22-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 APECO1_RS04800 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 SUPERFAMILY SSF52218 1 166 4.04E-30 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS04800 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 Gene3D G3DSA:3.40.50.360 1 174 1.3E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS04800 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 Pfam PF03358 NADPH-dependent FMN reductase 1 140 4.1E-34 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APECO1_RS04800 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 PANTHER PTHR30543:SF1 1 176 8.8E-53 T 22-04-2016 APECO1_RS04800 cb34b8340ab7bdc8f3f7e20a9f41af4d 191 PANTHER PTHR30543 1 176 8.8E-53 T 22-04-2016 APECO1_RS24710 ef397041751f31199ebac7a198315df0 395 Pfam PF05987 Bacterial protein of unknown function (DUF898) 13 376 2.3E-55 T 22-04-2016 IPR010295 Protein of unknown function DUF898 APECO1_RS17330 a13c80d0aeb21d18be975d1d62c481ea 356 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 345 1.8E-95 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 APECO1_RS17330 a13c80d0aeb21d18be975d1d62c481ea 356 PANTHER PTHR33529 1 347 5.0E-47 T 22-04-2016 APECO1_RS17330 a13c80d0aeb21d18be975d1d62c481ea 356 PANTHER PTHR33529:SF2 1 347 5.0E-47 T 22-04-2016 APECO1_RS17330 a13c80d0aeb21d18be975d1d62c481ea 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 344 8.0E-54 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APECO1_RS10395 5d25848d824728a0365a39fb675cbc50 121 PANTHER PTHR38766:SF1 1 121 2.9E-42 T 22-04-2016 APECO1_RS10395 5d25848d824728a0365a39fb675cbc50 121 PANTHER PTHR38766 1 121 2.9E-42 T 22-04-2016 APECO1_RS10395 5d25848d824728a0365a39fb675cbc50 121 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 25 93 3.3E-23 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 APECO1_RS10395 5d25848d824728a0365a39fb675cbc50 121 Pfam PF04347 Flagellar biosynthesis protein, FliO 37 116 1.7E-19 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 APECO1_RS14280 51b29a86fa35a90f650692e52981b3d8 335 SUPERFAMILY SSF47413 14 83 9.65E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS14280 51b29a86fa35a90f650692e52981b3d8 335 PANTHER PTHR34475 2 335 4.0E-62 T 22-04-2016 APECO1_RS14280 51b29a86fa35a90f650692e52981b3d8 335 Gene3D G3DSA:1.10.260.40 6 86 1.0E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS14280 51b29a86fa35a90f650692e52981b3d8 335 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 330 45.638 T 22-04-2016 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 APECO1_RS14280 51b29a86fa35a90f650692e52981b3d8 335 Pfam PF13464 Domain of unknown function (DUF4115) 253 327 9.2E-24 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 APECO1_RS14280 51b29a86fa35a90f650692e52981b3d8 335 PANTHER PTHR34475:SF1 2 335 4.0E-62 T 22-04-2016 APECO1_RS14280 51b29a86fa35a90f650692e52981b3d8 335 Pfam PF13413 Helix-turn-helix domain 18 78 5.1E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS14280 51b29a86fa35a90f650692e52981b3d8 335 SMART SM00530 18 79 2.2E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS21360 83a3ddfc1a587fc0cd7ec858252ff322 330 SUPERFAMILY SSF55681 7 329 1.11E-98 T 22-04-2016 APECO1_RS21360 83a3ddfc1a587fc0cd7ec858252ff322 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.8E-200 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APECO1_RS21360 83a3ddfc1a587fc0cd7ec858252ff322 330 Gene3D G3DSA:3.30.930.10 2 326 5.5E-153 T 22-04-2016 APECO1_RS21360 83a3ddfc1a587fc0cd7ec858252ff322 330 PANTHER PTHR30073 1 330 4.0E-200 T 22-04-2016 APECO1_RS21360 83a3ddfc1a587fc0cd7ec858252ff322 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 46.126 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APECO1_RS21360 83a3ddfc1a587fc0cd7ec858252ff322 330 PANTHER PTHR30073:SF5 1 330 4.0E-200 T 22-04-2016 APECO1_RS21360 83a3ddfc1a587fc0cd7ec858252ff322 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 1.3E-93 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APECO1_RS21360 83a3ddfc1a587fc0cd7ec858252ff322 330 PIRSF PIRSF001555 1 329 3.9E-151 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APECO1_RS17570 08a9b1348813752b10bb807c80c4b69b 130 Pfam PF04076 Bacterial OB fold (BOF) protein 25 127 1.8E-47 T 22-04-2016 IPR005220 Bacterial OB-fold APECO1_RS17570 08a9b1348813752b10bb807c80c4b69b 130 PANTHER PTHR36571 4 129 2.5E-63 T 22-04-2016 APECO1_RS17570 08a9b1348813752b10bb807c80c4b69b 130 SUPERFAMILY SSF101756 31 127 1.57E-36 T 22-04-2016 IPR005220 Bacterial OB-fold APECO1_RS17570 08a9b1348813752b10bb807c80c4b69b 130 Gene3D G3DSA:2.40.50.200 30 129 7.1E-44 T 22-04-2016 IPR005220 Bacterial OB-fold APECO1_RS17570 08a9b1348813752b10bb807c80c4b69b 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 129 2.2E-66 T 22-04-2016 IPR016052 Bacteriophage 933W, L0136 APECO1_RS17570 08a9b1348813752b10bb807c80c4b69b 130 PANTHER PTHR36571:SF1 4 129 2.5E-63 T 22-04-2016 APECO1_RS01855 312bb44935511fcb9e07006e2d308b87 257 TIGRFAM TIGR04390 OMP_YaiO_dom: outer membrane protein, YaiO family 22 257 1.6E-54 T 22-04-2016 IPR030887 YaiO family, OMP domain APECO1_RS01855 312bb44935511fcb9e07006e2d308b87 257 PIRSF PIRSF007027 1 257 9.9E-164 T 22-04-2016 IPR016504 Uncharacterised conserved protein UCP007027 APECO1_RS25630 0eacfb27c9737623b5f9af63b7d88e62 215 Gene3D G3DSA:3.40.50.1240 2 209 2.8E-61 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS25630 0eacfb27c9737623b5f9af63b7d88e62 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 64.959 T 22-04-2016 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 UniPathway: UPA00109 APECO1_RS25630 0eacfb27c9737623b5f9af63b7d88e62 215 SUPERFAMILY SSF53254 1 208 3.8E-58 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS25630 0eacfb27c9737623b5f9af63b7d88e62 215 PANTHER PTHR23029:SF53 1 215 4.4E-161 T 22-04-2016 APECO1_RS25630 0eacfb27c9737623b5f9af63b7d88e62 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 3.4E-57 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APECO1_RS25630 0eacfb27c9737623b5f9af63b7d88e62 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APECO1_RS25630 0eacfb27c9737623b5f9af63b7d88e62 215 PANTHER PTHR23029 1 215 4.4E-161 T 22-04-2016 APECO1_RS25630 0eacfb27c9737623b5f9af63b7d88e62 215 SMART SM00855 3 157 4.6E-24 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APECO1_RS02205 787304e09e3cef09c640759772fd43e4 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 20 9.5E-8 T 22-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site APECO1_RS02205 787304e09e3cef09c640759772fd43e4 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 2.8E-53 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG APECO1_RS21260 b1fe2da16af8b1102e141ec785aa823d 241 Gene3D G3DSA:1.20.58.220 9 114 2.0E-36 T 22-04-2016 APECO1_RS21260 b1fe2da16af8b1102e141ec785aa823d 241 SUPERFAMILY SSF109755 13 229 1.26E-69 T 22-04-2016 APECO1_RS21260 b1fe2da16af8b1102e141ec785aa823d 241 PIRSF PIRSF003107 7 226 5.6E-67 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APECO1_RS21260 b1fe2da16af8b1102e141ec785aa823d 241 Gene3D G3DSA:1.20.58.220 127 235 1.6E-31 T 22-04-2016 APECO1_RS21260 b1fe2da16af8b1102e141ec785aa823d 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 5.1E-71 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APECO1_RS21260 b1fe2da16af8b1102e141ec785aa823d 241 PANTHER PTHR10010 1 224 1.2E-93 T 22-04-2016 APECO1_RS21260 b1fe2da16af8b1102e141ec785aa823d 241 PANTHER PTHR10010:SF14 1 224 1.2E-93 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APECO1_RS21260 b1fe2da16af8b1102e141ec785aa823d 241 Pfam PF01895 PhoU domain 128 212 1.7E-17 T 22-04-2016 IPR026022 PhoU domain APECO1_RS21260 b1fe2da16af8b1102e141ec785aa823d 241 Pfam PF01895 PhoU domain 27 111 6.5E-20 T 22-04-2016 IPR026022 PhoU domain APECO1_RS13910 03976b836c485a5ee89901e09d2fb723 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 4.1E-90 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APECO1_RS13910 03976b836c485a5ee89901e09d2fb723 208 Gene3D G3DSA:3.40.50.2020 2 208 5.0E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS13910 03976b836c485a5ee89901e09d2fb723 208 SUPERFAMILY SSF53271 4 206 3.02E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS13910 03976b836c485a5ee89901e09d2fb723 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 8.7E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS13910 03976b836c485a5ee89901e09d2fb723 208 PANTHER PTHR10285 1 197 3.6E-103 T 22-04-2016 APECO1_RS13910 03976b836c485a5ee89901e09d2fb723 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.829 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APECO1_RS05640 fe547f4c4432278cedcb69f83fca327b 414 Pfam PF02687 FtsX-like permease family 274 407 7.5E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APECO1_RS05640 fe547f4c4432278cedcb69f83fca327b 414 Pfam PF12704 MacB-like periplasmic core domain 27 239 2.0E-15 T 22-04-2016 IPR025857 MacB-like periplasmic core domain APECO1_RS05640 fe547f4c4432278cedcb69f83fca327b 414 PANTHER PTHR30489:SF0 3 414 7.9E-88 T 22-04-2016 APECO1_RS05640 fe547f4c4432278cedcb69f83fca327b 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 4.4E-167 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 APECO1_RS05640 fe547f4c4432278cedcb69f83fca327b 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 1.9E-237 T 22-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 APECO1_RS05640 fe547f4c4432278cedcb69f83fca327b 414 PANTHER PTHR30489 3 414 7.9E-88 T 22-04-2016 APECO1_RS12400 041a391190b70063a16fd75ee6ff5e3e 220 Pfam PF01144 Coenzyme A transferase 6 215 6.3E-70 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS12400 041a391190b70063a16fd75ee6ff5e3e 220 Gene3D G3DSA:3.40.1080.10 3 215 2.3E-77 T 22-04-2016 APECO1_RS12400 041a391190b70063a16fd75ee6ff5e3e 220 PANTHER PTHR13707 1 220 9.0E-169 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS12400 041a391190b70063a16fd75ee6ff5e3e 220 SUPERFAMILY SSF100950 2 217 4.19E-76 T 22-04-2016 APECO1_RS12400 041a391190b70063a16fd75ee6ff5e3e 220 PANTHER PTHR13707:SF39 1 220 9.0E-169 T 22-04-2016 APECO1_RS12400 041a391190b70063a16fd75ee6ff5e3e 220 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 6 217 2.2E-64 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 APECO1_RS12400 041a391190b70063a16fd75ee6ff5e3e 220 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 APECO1_RS12400 041a391190b70063a16fd75ee6ff5e3e 220 SMART SM00882 5 216 1.4E-72 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APECO1_RS21760 2f8a6b8b081e43a441f6b87aade527c0 206 PANTHER PTHR30086:SF1 1 206 1.8E-142 T 22-04-2016 APECO1_RS21760 2f8a6b8b081e43a441f6b87aade527c0 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 2.9E-70 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 APECO1_RS21760 2f8a6b8b081e43a441f6b87aade527c0 206 PANTHER PTHR30086 1 206 1.8E-142 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS21760 2f8a6b8b081e43a441f6b87aade527c0 206 Pfam PF01810 LysE type translocator 14 205 3.2E-58 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS21760 2f8a6b8b081e43a441f6b87aade527c0 206 PIRSF PIRSF006324 1 206 2.4E-41 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APECO1_RS12755 9a6eb3dd40cee065ac08191912e6af4e 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.447 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 APECO1_RS12755 9a6eb3dd40cee065ac08191912e6af4e 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 3.7E-56 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 9 496 7.8E-118 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 Gene3D G3DSA:1.20.1250.20 6 182 4.2E-24 T 22-04-2016 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 Pfam PF07690 Major Facilitator Superfamily 14 407 2.3E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 PANTHER PTHR23501 2 497 1.7E-143 T 22-04-2016 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 PANTHER PTHR23501:SF51 2 497 1.7E-143 T 22-04-2016 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 Gene3D G3DSA:1.20.1250.20 261 423 9.9E-20 T 22-04-2016 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 Gene3D G3DSA:1.20.1250.20 482 502 9.9E-20 T 22-04-2016 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 4.8E-6 T 22-04-2016 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 398 417 4.8E-6 T 22-04-2016 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 4.8E-6 T 22-04-2016 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 4.8E-6 T 22-04-2016 APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 SUPERFAMILY SSF103473 477 500 6.93E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 SUPERFAMILY SSF103473 4 189 6.93E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS07410 75b2d0c696f47a36b64ccca4b57e9239 504 SUPERFAMILY SSF103473 246 417 6.93E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS00365 17ab54c0d6e14f9133a487c8a6d215dc 254 PANTHER PTHR30353 1 252 4.1E-193 T 22-04-2016 IPR032818 DedA family APECO1_RS00365 17ab54c0d6e14f9133a487c8a6d215dc 254 Pfam PF09335 SNARE associated Golgi protein 36 159 1.9E-18 T 22-04-2016 IPR032816 SNARE associated Golgi protein APECO1_RS00365 17ab54c0d6e14f9133a487c8a6d215dc 254 PANTHER PTHR30353:SF7 1 252 4.1E-193 T 22-04-2016 APECO1_RS22950 bfce4d1ec5a9d1522942038674c0c890 135 Pfam PF03610 PTS system fructose IIA component 7 113 4.4E-17 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS22950 bfce4d1ec5a9d1522942038674c0c890 135 PANTHER PTHR33799 2 131 1.5E-25 T 22-04-2016 APECO1_RS22950 bfce4d1ec5a9d1522942038674c0c890 135 Gene3D G3DSA:3.40.50.510 1 133 2.5E-36 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS22950 bfce4d1ec5a9d1522942038674c0c890 135 SUPERFAMILY SSF53062 1 125 3.66E-30 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS22950 bfce4d1ec5a9d1522942038674c0c890 135 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 114 2.3E-43 T 22-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS05580 ca6febd8accbf65b7de2c92f5ff99d50 274 SUPERFAMILY SSF56112 15 268 1.01E-28 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS05580 ca6febd8accbf65b7de2c92f5ff99d50 274 Pfam PF01636 Phosphotransferase enzyme family 25 222 7.1E-14 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase APECO1_RS05580 ca6febd8accbf65b7de2c92f5ff99d50 274 Gene3D G3DSA:3.90.1200.10 75 263 2.5E-12 T 22-04-2016 APECO1_RS05580 ca6febd8accbf65b7de2c92f5ff99d50 274 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 26 270 1.1E-100 T 22-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 APECO1_RS05580 ca6febd8accbf65b7de2c92f5ff99d50 274 Hamap MF_01604 Thiamine kinase [thiK]. 1 274 70.837 T 22-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 APECO1_RS16585 28c2cd357e3f69e26116e7b2eec837a3 235 PANTHER PTHR33514 1 233 1.1E-41 T 22-04-2016 APECO1_RS16585 28c2cd357e3f69e26116e7b2eec837a3 235 PANTHER PTHR33514:SF4 1 233 1.1E-41 T 22-04-2016 APECO1_RS16585 28c2cd357e3f69e26116e7b2eec837a3 235 Pfam PF02361 Cobalt transport protein 10 202 3.9E-5 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component APECO1_RS08845 dede1c3ea3381e85c8861d24a1477dc6 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 1.9E-19 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 APECO1_RS08845 dede1c3ea3381e85c8861d24a1477dc6 79 PANTHER PTHR35175:SF1 1 79 2.3E-50 T 22-04-2016 APECO1_RS08845 dede1c3ea3381e85c8861d24a1477dc6 79 PANTHER PTHR35175 1 79 2.3E-50 T 22-04-2016 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 Gene3D G3DSA:3.40.50.300 3 169 1.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 PANTHER PTHR21087 1 172 5.5E-119 T 22-04-2016 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 Pfam PF01202 Shikimate kinase 11 168 2.8E-47 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 PANTHER PTHR21087:SF9 1 172 5.5E-119 T 22-04-2016 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 23.952 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 SUPERFAMILY SSF52540 4 170 3.41E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 43.126 T 22-04-2016 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 PRINTS PR01100 Shikimate kinase family signature 74 83 2.8E-25 T 22-04-2016 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 PRINTS PR01100 Shikimate kinase family signature 57 65 2.8E-25 T 22-04-2016 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 PRINTS PR01100 Shikimate kinase family signature 29 42 2.8E-25 T 22-04-2016 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 PRINTS PR01100 Shikimate kinase family signature 5 20 2.8E-25 T 22-04-2016 APECO1_RS01975 4ca158869413fadfa12127deaa3d31ed 174 PRINTS PR01100 Shikimate kinase family signature 95 112 2.8E-25 T 22-04-2016 APECO1_RS12920 10c02a589a7eba998fe90721c892248e 269 PANTHER PTHR30269:SF0 10 262 1.3E-115 T 22-04-2016 APECO1_RS12920 10c02a589a7eba998fe90721c892248e 269 PANTHER PTHR30269 10 262 1.3E-115 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APECO1_RS12920 10c02a589a7eba998fe90721c892248e 269 Pfam PF01925 Sulfite exporter TauE/SafE 18 253 3.2E-42 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APECO1_RS00585 fc2fccfb0726b8227909ff44ab297e7f 183 Gene3D G3DSA:3.40.80.10 3 180 6.7E-72 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APECO1_RS00585 fc2fccfb0726b8227909ff44ab297e7f 183 SMART SM00644 16 166 1.4E-62 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APECO1_RS00585 fc2fccfb0726b8227909ff44ab297e7f 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 167 1.4E-20 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APECO1_RS00585 fc2fccfb0726b8227909ff44ab297e7f 183 PANTHER PTHR30417 1 180 1.0E-97 T 22-04-2016 APECO1_RS00585 fc2fccfb0726b8227909ff44ab297e7f 183 PANTHER PTHR30417:SF4 1 180 1.0E-97 T 22-04-2016 APECO1_RS00585 fc2fccfb0726b8227909ff44ab297e7f 183 SUPERFAMILY SSF55846 2 179 2.62E-69 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APECO1_RS18430 f9477b20d5bbd30265174e187ea63807 325 Pfam PF01699 Sodium/calcium exchanger protein 175 317 2.4E-26 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APECO1_RS18430 f9477b20d5bbd30265174e187ea63807 325 Pfam PF01699 Sodium/calcium exchanger protein 4 143 3.9E-28 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APECO1_RS18430 f9477b20d5bbd30265174e187ea63807 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 1.2E-106 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 APECO1_RS18430 f9477b20d5bbd30265174e187ea63807 325 PANTHER PTHR10846 19 316 4.8E-83 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 APECO1_RS01730 f321862706f43a63468527b387e64b47 460 PANTHER PTHR32027 50 457 2.5E-249 T 22-04-2016 APECO1_RS01730 f321862706f43a63468527b387e64b47 460 Gene3D G3DSA:2.30.40.10 77 133 2.4E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS01730 f321862706f43a63468527b387e64b47 460 SUPERFAMILY SSF51338 80 124 6.79E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APECO1_RS01730 f321862706f43a63468527b387e64b47 460 PANTHER PTHR32027:SF9 50 457 2.5E-249 T 22-04-2016 APECO1_RS01730 f321862706f43a63468527b387e64b47 460 Gene3D G3DSA:3.20.20.140 134 405 2.2E-94 T 22-04-2016 APECO1_RS01730 f321862706f43a63468527b387e64b47 460 SUPERFAMILY SSF51556 118 411 1.55E-73 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS01730 f321862706f43a63468527b387e64b47 460 Pfam PF07969 Amidohydrolase family 167 431 1.6E-10 T 22-04-2016 IPR013108 Amidohydrolase 3 APECO1_RS06260 d3abc3aa651e346116d83b429bc53455 176 PANTHER PTHR36570:SF2 1 176 2.0E-105 T 22-04-2016 APECO1_RS06260 d3abc3aa651e346116d83b429bc53455 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 2.4E-45 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 APECO1_RS06260 d3abc3aa651e346116d83b429bc53455 176 SUPERFAMILY SSF158442 15 160 6.67E-46 T 22-04-2016 APECO1_RS06260 d3abc3aa651e346116d83b429bc53455 176 Gene3D G3DSA:1.20.1550.10 1 174 6.7E-71 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain APECO1_RS06260 d3abc3aa651e346116d83b429bc53455 176 PANTHER PTHR36570 1 176 2.0E-105 T 22-04-2016 APECO1_RS06260 d3abc3aa651e346116d83b429bc53455 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.803 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB APECO1_RS12630 00926371a557641dc94145ad2fafee4b 101 PANTHER PTHR35893:SF1 1 101 1.9E-72 T 22-04-2016 APECO1_RS12630 00926371a557641dc94145ad2fafee4b 101 PANTHER PTHR35893 1 101 1.9E-72 T 22-04-2016 APECO1_RS12630 00926371a557641dc94145ad2fafee4b 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 1.4E-30 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB APECO1_RS13025 1ecaf8fda79cd5aa3da5038e40cf4a25 385 Pfam PF13356 Domain of unknown function (DUF4102) 2 86 3.9E-20 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 APECO1_RS13025 1ecaf8fda79cd5aa3da5038e40cf4a25 385 Gene3D G3DSA:1.10.443.10 200 371 3.2E-20 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS13025 1ecaf8fda79cd5aa3da5038e40cf4a25 385 PANTHER PTHR30629:SF3 2 385 8.0E-260 T 22-04-2016 APECO1_RS13025 1ecaf8fda79cd5aa3da5038e40cf4a25 385 PANTHER PTHR30629 2 385 8.0E-260 T 22-04-2016 APECO1_RS13025 1ecaf8fda79cd5aa3da5038e40cf4a25 385 SUPERFAMILY SSF56349 92 374 1.59E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS13025 1ecaf8fda79cd5aa3da5038e40cf4a25 385 Gene3D G3DSA:1.10.150.130 92 187 4.7E-16 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS13025 1ecaf8fda79cd5aa3da5038e40cf4a25 385 Pfam PF00589 Phage integrase family 199 364 8.3E-34 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS25440 9a211af9b4c8706f5506792564cf25ac 109 Pfam PF05939 Phage minor tail protein 2 108 6.5E-37 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 PANTHER PTHR11911 180 325 3.7E-43 T 22-04-2016 APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 PIRSF PIRSF004692 1 328 7.6E-136 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 Gene3D G3DSA:3.40.50.10490 17 200 8.1E-52 T 22-04-2016 APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 3.3E-135 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 Pfam PF01380 SIS domain 46 177 1.0E-35 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 PANTHER PTHR11911:SF90 180 325 3.7E-43 T 22-04-2016 APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 Pfam PF00571 CBS domain 206 261 6.2E-5 T 22-04-2016 IPR000644 CBS domain APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 Pfam PF00571 CBS domain 274 325 1.9E-5 T 22-04-2016 IPR000644 CBS domain APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 Gene3D G3DSA:3.10.580.10 201 325 6.7E-39 T 22-04-2016 APECO1_RS18435 6f1a50071c3b526adab8384d2f3d4af5 328 SUPERFAMILY SSF53697 14 325 4.45E-68 T 22-04-2016 APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 268 4.7E-103 T 22-04-2016 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 TIGRFAM TIGR02463 MPGP_rel: mannosyl-3-phosphoglycerate phosphatase homolog 9 232 3.4E-101 T 22-04-2016 APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 SUPERFAMILY SSF56784 6 232 1.71E-47 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 231 1.3E-47 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 Hamap MF_00617 Mannosyl-3-phosphoglycerate phosphatase [mngB]. 6 252 44.563 T 22-04-2016 IPR012815 Mannosyl-3-phosphoglycerate phosphatase GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 Gene3D G3DSA:3.40.50.1000 9 89 2.0E-39 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 Gene3D G3DSA:3.40.50.1000 180 264 2.0E-39 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 Gene3D G3DSA:3.30.980.20 94 179 1.9E-38 T 22-04-2016 APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 PANTHER PTHR10000 1 265 7.9E-171 T 22-04-2016 APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 232 3.0E-13 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS10430 c6b3489e9bed0f97bd81fae7c9b76738 271 PANTHER PTHR10000:SF19 1 265 7.9E-171 T 22-04-2016 APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 PIRSF PIRSF002599 1 70 3.5E-25 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 PANTHER PTHR11544:SF54 1 70 2.0E-47 T 22-04-2016 APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.8E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 PRINTS PR00050 Cold shock protein signature 7 22 9.0E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 PRINTS PR00050 Cold shock protein signature 43 61 9.0E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 PRINTS PR00050 Cold shock protein signature 28 37 9.0E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 PANTHER PTHR11544 1 70 2.0E-47 T 22-04-2016 APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 Gene3D G3DSA:2.40.50.140 5 68 7.9E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 SMART SM00357 6 70 2.4E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site APECO1_RS05005 662e2c654a4d1fc5062f4e29d8747029 70 SUPERFAMILY SSF50249 3 69 6.64E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS11125 858a74ff2251d9971f08d49c4bffe798 272 Pfam PF06067 Domain of unknown function (DUF932) 37 261 5.1E-54 T 22-04-2016 IPR026325 Protein of unknown function DUF932 APECO1_RS17920 ab3166cceef252444fd02bfe29292bfe 378 PIRSF PIRSF037565 1 374 2.4E-166 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS17920 ab3166cceef252444fd02bfe29292bfe 378 PANTHER PTHR18895:SF6 79 378 4.6E-177 T 22-04-2016 APECO1_RS17920 ab3166cceef252444fd02bfe29292bfe 378 Gene3D G3DSA:3.40.50.150 190 373 2.2E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS17920 ab3166cceef252444fd02bfe29292bfe 378 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APECO1_RS17920 ab3166cceef252444fd02bfe29292bfe 378 Pfam PF05175 Methyltransferase small domain 199 370 9.9E-59 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APECO1_RS17920 ab3166cceef252444fd02bfe29292bfe 378 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 373 50.572 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APECO1_RS17920 ab3166cceef252444fd02bfe29292bfe 378 SUPERFAMILY SSF53335 192 373 7.17E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APECO1_RS17920 ab3166cceef252444fd02bfe29292bfe 378 PANTHER PTHR18895 79 378 4.6E-177 T 22-04-2016 APECO1_RS05015 22d6146a6f8fda166566b0ed2143ac0f 57 Pfam PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system 2 54 4.3E-35 T 22-04-2016 IPR012563 Gns APECO1_RS23070 c7e46d2156e8123fa37a0ac3241359fb 122 PANTHER PTHR34299 1 122 8.3E-42 T 22-04-2016 APECO1_RS23070 c7e46d2156e8123fa37a0ac3241359fb 122 Gene3D G3DSA:1.10.3830.10 4 121 1.2E-45 T 22-04-2016 APECO1_RS23070 c7e46d2156e8123fa37a0ac3241359fb 122 PANTHER PTHR34299:SF1 1 122 8.3E-42 T 22-04-2016 APECO1_RS23070 c7e46d2156e8123fa37a0ac3241359fb 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APECO1_RS23070 c7e46d2156e8123fa37a0ac3241359fb 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 1.2E-35 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APECO1_RS05965 9f8b720e2235681bc81f157f25577cae 182 SUPERFAMILY SSF46955 2 63 4.21E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS05965 9f8b720e2235681bc81f157f25577cae 182 Gene3D G3DSA:1.10.10.10 1 67 2.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS05965 9f8b720e2235681bc81f157f25577cae 182 Pfam PF07471 Phage DNA packaging protein Nu1 1 163 1.5E-72 T 22-04-2016 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit APECO1_RS12095 0381124afc35c9f504346f9d1cc783a5 232 PANTHER PTHR24567 7 231 1.5E-98 T 22-04-2016 APECO1_RS12095 0381124afc35c9f504346f9d1cc783a5 232 Pfam PF00027 Cyclic nucleotide-binding domain 35 118 9.9E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APECO1_RS12095 0381124afc35c9f504346f9d1cc783a5 232 SMART SM00100 15 133 1.9E-17 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APECO1_RS12095 0381124afc35c9f504346f9d1cc783a5 232 SUPERFAMILY SSF51206 31 139 1.44E-20 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like APECO1_RS12095 0381124afc35c9f504346f9d1cc783a5 232 Gene3D G3DSA:2.60.120.10 26 139 4.5E-19 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APECO1_RS12095 0381124afc35c9f504346f9d1cc783a5 232 PANTHER PTHR24567:SF26 7 231 1.5E-98 T 22-04-2016 APECO1_RS13575 40a7020ae00c1ec205d5229a05bdacc3 72 PANTHER PTHR40613 1 72 4.2E-40 T 22-04-2016 APECO1_RS13575 40a7020ae00c1ec205d5229a05bdacc3 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 2.4E-29 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor APECO1_RS13575 40a7020ae00c1ec205d5229a05bdacc3 72 PANTHER PTHR40613:SF1 1 72 4.2E-40 T 22-04-2016 APECO1_RS13575 40a7020ae00c1ec205d5229a05bdacc3 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 4.0E-25 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor APECO1_RS25030 99adbdeae83e586c98c9e4963c696ae7 383 PANTHER PTHR30548 1 383 1.1E-257 T 22-04-2016 APECO1_RS25030 99adbdeae83e586c98c9e4963c696ae7 383 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 40 383 5.3E-84 T 22-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit APECO1_RS25030 99adbdeae83e586c98c9e4963c696ae7 383 PANTHER PTHR30548:SF6 1 383 1.1E-257 T 22-04-2016 APECO1_RS11330 3f92991395051cb8f273c10d13f31e41 361 Gene3D G3DSA:3.90.25.10 200 354 1.4E-56 T 22-04-2016 APECO1_RS11330 3f92991395051cb8f273c10d13f31e41 361 PANTHER PTHR10366 2 357 2.6E-193 T 22-04-2016 APECO1_RS11330 3f92991395051cb8f273c10d13f31e41 361 Gene3D G3DSA:3.40.50.720 2 199 1.8E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11330 3f92991395051cb8f273c10d13f31e41 361 SUPERFAMILY SSF51735 2 356 1.25E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11330 3f92991395051cb8f273c10d13f31e41 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 330 3.9E-98 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS11330 3f92991395051cb8f273c10d13f31e41 361 PANTHER PTHR10366:SF41 2 357 2.6E-193 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APECO1_RS11330 3f92991395051cb8f273c10d13f31e41 361 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 343 2.0E-154 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APECO1_RS07935 87887b19d967fb965aef24b080076f51 74 Pfam PF04325 Protein of unknown function (DUF465) 19 66 5.9E-14 T 22-04-2016 IPR007420 Protein of unknown function DUF465 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 SUPERFAMILY SSF54373 181 283 5.89E-23 T 22-04-2016 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 SUPERFAMILY SSF51905 4 183 7.79E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 SUPERFAMILY SSF51905 283 366 7.79E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 PANTHER PTHR10617:SF117 1 418 0.0 T 22-04-2016 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 Pfam PF01494 FAD binding domain 7 189 2.5E-11 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 Gene3D G3DSA:3.50.50.60 6 257 7.5E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 4.75E-8 T 22-04-2016 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.75E-8 T 22-04-2016 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 4.75E-8 T 22-04-2016 APECO1_RS00245 6ef78c98a02716bdc69c217d6439b059 428 PANTHER PTHR10617 1 418 0.0 T 22-04-2016 APECO1_RS13560 02045c8860c0255d9d2188a3e78911c0 254 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 254 3.6E-38 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS13560 02045c8860c0255d9d2188a3e78911c0 254 SUPERFAMILY SSF111364 26 254 3.79E-43 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS22785 ba9af17b1861cdee8c27ca5e9c8dd9b1 158 PIRSF PIRSF016548 1 158 5.0E-61 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 APECO1_RS22785 ba9af17b1861cdee8c27ca5e9c8dd9b1 158 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 40.878 T 22-04-2016 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd APECO1_RS22785 ba9af17b1861cdee8c27ca5e9c8dd9b1 158 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 147 1.9E-51 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 Pfam PF00271 Helicase conserved C-terminal domain 236 343 3.0E-28 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 Gene3D G3DSA:3.40.50.300 3 214 2.0E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 SUPERFAMILY SSF52540 76 358 1.14E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 SMART SM00490 262 343 7.5E-31 T 22-04-2016 IPR001650 Helicase, C-terminal APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 428 50.549 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 PANTHER PTHR24031:SF334 3 432 7.1E-237 T 22-04-2016 APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 Gene3D G3DSA:3.40.50.300 215 374 1.7E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 PANTHER PTHR24031 3 432 7.1E-237 T 22-04-2016 APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 SMART SM00487 23 223 6.8E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APECO1_RS14565 8558663f9e2beb6bb3074c54d3e213ba 444 Pfam PF00270 DEAD/DEAH box helicase 28 197 6.7E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APECO1_RS18210 bae5d945d3204e6d3d35e21583e7deb3 172 PANTHER PTHR11019 1 167 6.1E-76 T 22-04-2016 APECO1_RS18210 bae5d945d3204e6d3d35e21583e7deb3 172 PANTHER PTHR11019:SF115 1 167 6.1E-76 T 22-04-2016 APECO1_RS18210 bae5d945d3204e6d3d35e21583e7deb3 172 Pfam PF01965 DJ-1/PfpI family 3 167 1.1E-54 T 22-04-2016 IPR002818 DJ-1/PfpI APECO1_RS18210 bae5d945d3204e6d3d35e21583e7deb3 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 3.0E-68 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 APECO1_RS18210 bae5d945d3204e6d3d35e21583e7deb3 172 Gene3D G3DSA:3.40.50.880 1 170 2.9E-51 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS18210 bae5d945d3204e6d3d35e21583e7deb3 172 SUPERFAMILY SSF52317 3 170 2.36E-45 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APECO1_RS10740 3de9ff12dbb005852ad7804286a49f8c 135 Pfam PF06163 Bacterial protein of unknown function (DUF977) 2 134 8.7E-30 T 22-04-2016 IPR010382 Protein of unknown function DUF977 APECO1_RS18530 6d009ab9d5f35a3f58241b7a35cf21ac 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 38.055 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 APECO1_RS18530 6d009ab9d5f35a3f58241b7a35cf21ac 229 Gene3D G3DSA:3.20.20.70 9 226 9.7E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS18530 6d009ab9d5f35a3f58241b7a35cf21ac 229 PANTHER PTHR36204:SF1 2 227 2.6E-118 T 22-04-2016 APECO1_RS18530 6d009ab9d5f35a3f58241b7a35cf21ac 229 SUPERFAMILY SSF51366 14 224 1.77E-56 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS18530 6d009ab9d5f35a3f58241b7a35cf21ac 229 PANTHER PTHR36204 2 227 2.6E-118 T 22-04-2016 APECO1_RS18530 6d009ab9d5f35a3f58241b7a35cf21ac 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 226 1.2E-92 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 APECO1_RS18315 73c08e0395f616675f6f042052df4b78 505 Gene3D G3DSA:3.40.720.10 190 439 1.6E-11 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS18315 73c08e0395f616675f6f042052df4b78 505 Pfam PF00884 Sulfatase 188 439 2.0E-43 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS18315 73c08e0395f616675f6f042052df4b78 505 PANTHER PTHR30443:SF5 1 499 0.0 T 22-04-2016 APECO1_RS18315 73c08e0395f616675f6f042052df4b78 505 SUPERFAMILY SSF53649 190 427 5.98E-22 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS18315 73c08e0395f616675f6f042052df4b78 505 PANTHER PTHR30443 1 499 0.0 T 22-04-2016 APECO1_RS22210 d1794481d2eab352d3325a98a07845d2 72 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 3.8E-11 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 APECO1_RS03630 145a4e5b5792b09eda8ed0ad142d1099 126 Pfam PF13985 YbgS-like protein 3 126 3.5E-55 T 22-04-2016 IPR020363 Uncharacterised protein family YbgS APECO1_RS03630 145a4e5b5792b09eda8ed0ad142d1099 126 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 50 126 2.0E-38 T 22-04-2016 IPR020363 Uncharacterised protein family YbgS APECO1_RS19360 c0f38bdc68108edcf8e984c52ccfe680 387 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 4.1E-22 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS19360 c0f38bdc68108edcf8e984c52ccfe680 387 SUPERFAMILY SSF51419 34 268 2.62E-24 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS19360 c0f38bdc68108edcf8e984c52ccfe680 387 Gene3D G3DSA:3.20.20.10 112 265 2.9E-9 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS11005 c1a2c185221fd7cd4d89d152c7d3aa2b 321 PANTHER PTHR34821 2 173 1.8E-102 T 22-04-2016 APECO1_RS11005 c1a2c185221fd7cd4d89d152c7d3aa2b 321 Pfam PF04657 Putative inner membrane exporter, YdcZ 169 303 2.7E-15 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ APECO1_RS11005 c1a2c185221fd7cd4d89d152c7d3aa2b 321 Pfam PF04657 Putative inner membrane exporter, YdcZ 10 154 7.3E-32 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ APECO1_RS11005 c1a2c185221fd7cd4d89d152c7d3aa2b 321 PANTHER PTHR34821:SF1 2 173 1.8E-102 T 22-04-2016 APECO1_RS11005 c1a2c185221fd7cd4d89d152c7d3aa2b 321 SUPERFAMILY SSF103473 10 253 5.49E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS20505 057744308bcb7e53983e26997bcceae2 306 Pfam PF16154 Domain of unknown function (DUF4862) 9 294 2.5E-91 T 22-04-2016 IPR032344 Protein of unknown function DUF4862 APECO1_RS20505 057744308bcb7e53983e26997bcceae2 306 SUPERFAMILY SSF51658 41 235 1.54E-7 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS20200 bfe52bf058477bfd4060c00e97e808ed 255 Gene3D G3DSA:3.20.20.450 33 250 7.2E-25 T 22-04-2016 IPR001633 EAL domain APECO1_RS20200 bfe52bf058477bfd4060c00e97e808ed 255 SUPERFAMILY SSF141868 26 249 8.11E-30 T 22-04-2016 IPR001633 EAL domain APECO1_RS20200 bfe52bf058477bfd4060c00e97e808ed 255 PANTHER PTHR33121 1 255 2.3E-130 T 22-04-2016 APECO1_RS20200 bfe52bf058477bfd4060c00e97e808ed 255 SMART SM00052 7 247 5.5E-55 T 22-04-2016 IPR001633 EAL domain APECO1_RS20200 bfe52bf058477bfd4060c00e97e808ed 255 PANTHER PTHR33121:SF6 1 255 2.3E-130 T 22-04-2016 APECO1_RS20200 bfe52bf058477bfd4060c00e97e808ed 255 Pfam PF00563 EAL domain 27 242 2.3E-29 T 22-04-2016 IPR001633 EAL domain APECO1_RS13945 5e2777069dc3cfa1cc66e785831ad0dd 63 Pfam PF11119 Protein of unknown function (DUF2633) 9 62 1.1E-30 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 APECO1_RS13945 5e2777069dc3cfa1cc66e785831ad0dd 63 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 63 2.0E-29 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 APECO1_RS14135 951d9beb7f6a688e4f7ac638a8889444 60 Pfam PF13935 Ead/Ea22-like protein 2 30 2.9E-9 T 22-04-2016 IPR025153 Ead/Ea22-like protein APECO1_RS03000 e0f1cc85c9d62b640c6184fbf68bd83e 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 8.2E-29 T 22-04-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein APECO1_RS03000 e0f1cc85c9d62b640c6184fbf68bd83e 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.922 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 APECO1_RS03000 e0f1cc85c9d62b640c6184fbf68bd83e 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.8E-29 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 APECO1_RS03000 e0f1cc85c9d62b640c6184fbf68bd83e 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 74 2.0E-36 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 APECO1_RS03000 e0f1cc85c9d62b640c6184fbf68bd83e 98 PIRSF PIRSF002736 1 97 3.0E-38 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 APECO1_RS04145 6ce61e826b17c7c70a5e13980790f51c 158 Pfam PF10722 Putative bacterial sensory transduction regulator 9 131 1.1E-16 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN APECO1_RS18710 696b401b1fc9547b080033917cb16c27 320 PANTHER PTHR10584:SF187 4 317 3.8E-122 T 22-04-2016 APECO1_RS18710 696b401b1fc9547b080033917cb16c27 320 SUPERFAMILY SSF53613 1 308 3.59E-75 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS18710 696b401b1fc9547b080033917cb16c27 320 PANTHER PTHR10584 4 317 3.8E-122 T 22-04-2016 APECO1_RS18710 696b401b1fc9547b080033917cb16c27 320 Gene3D G3DSA:3.40.1190.20 1 313 1.4E-72 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS18710 696b401b1fc9547b080033917cb16c27 320 Pfam PF00294 pfkB family carbohydrate kinase 34 296 9.9E-44 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:3.30.70.20 5 53 1.1E-17 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:3.30.70.20 174 194 1.1E-17 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:3.30.70.20 437 466 6.5E-77 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:3.30.70.20 237 359 6.5E-77 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:1.10.3650.10 360 435 3.5E-33 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 Pfam PF13247 4Fe-4S dicluster domain 176 272 8.7E-38 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 SUPERFAMILY SSF54862 1 504 2.09E-188 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 PANTHER PTHR11938:SF8 1 31 4.6E-130 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 PANTHER PTHR11938:SF8 171 337 4.6E-130 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 PANTHER PTHR11938:SF8 135 144 4.6E-130 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 Gene3D G3DSA:3.30.70.20 195 236 2.6E-25 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 0.0 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 PANTHER PTHR11938 1 31 4.6E-130 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 PANTHER PTHR11938 171 337 4.6E-130 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 PANTHER PTHR11938 135 144 4.6E-130 T 22-04-2016 APECO1_RS06495 921d2776715fd61811f12cb3e082343e 512 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 359 437 3.8E-31 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 APECO1_RS05265 564233cc09f9d1c7cf9967ffcf8472f6 177 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 48.2 T 22-04-2016 IPR024900 O-acetyl-ADP-ribose deacetylase APECO1_RS05265 564233cc09f9d1c7cf9967ffcf8472f6 177 PANTHER PTHR11106 4 171 2.3E-85 T 22-04-2016 APECO1_RS05265 564233cc09f9d1c7cf9967ffcf8472f6 177 SMART SM00506 4 137 3.5E-58 T 22-04-2016 IPR002589 Macro domain APECO1_RS05265 564233cc09f9d1c7cf9967ffcf8472f6 177 Gene3D G3DSA:3.40.220.10 3 174 1.9E-70 T 22-04-2016 APECO1_RS05265 564233cc09f9d1c7cf9967ffcf8472f6 177 Pfam PF01661 Macro domain 21 137 1.1E-41 T 22-04-2016 IPR002589 Macro domain APECO1_RS05265 564233cc09f9d1c7cf9967ffcf8472f6 177 SUPERFAMILY SSF52949 3 172 3.7E-64 T 22-04-2016 APECO1_RS11200 bbd13e1ae1388609ce6d68f412dbbdb5 352 PANTHER PTHR30574 4 345 1.1E-75 T 22-04-2016 APECO1_RS11200 bbd13e1ae1388609ce6d68f412dbbdb5 352 PANTHER PTHR30574:SF1 4 345 1.1E-75 T 22-04-2016 APECO1_RS11200 bbd13e1ae1388609ce6d68f412dbbdb5 352 Pfam PF04143 Sulphur transport 21 331 2.3E-102 T 22-04-2016 IPR007272 Sulphur transport domain APECO1_RS02685 be3bffad05a21fb01ce36039e534649b 70 Pfam PF13275 S4 domain 9 69 3.9E-24 T 22-04-2016 APECO1_RS02685 be3bffad05a21fb01ce36039e534649b 70 Gene3D G3DSA:3.10.290.10 3 69 6.3E-28 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APECO1_RS02685 be3bffad05a21fb01ce36039e534649b 70 PANTHER PTHR32319 8 69 1.7E-27 T 22-04-2016 APECO1_RS02685 be3bffad05a21fb01ce36039e534649b 70 SUPERFAMILY SSF55174 7 69 5.5E-20 T 22-04-2016 APECO1_RS25250 c42553c732ebb0345791be7f2bc9099b 274 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 7 272 2.5E-92 T 22-04-2016 IPR019276 Protein of unkown function DUF2303 APECO1_RS12690 aa97b48fbbac05685146b089ee53b8d6 325 Pfam PF00146 NADH dehydrogenase 17 317 1.5E-120 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APECO1_RS12690 aa97b48fbbac05685146b089ee53b8d6 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APECO1_RS12690 aa97b48fbbac05685146b089ee53b8d6 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 24.072 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APECO1_RS12690 aa97b48fbbac05685146b089ee53b8d6 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APECO1_RS12690 aa97b48fbbac05685146b089ee53b8d6 325 PANTHER PTHR11432 1 321 1.3E-243 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APECO1_RS12690 aa97b48fbbac05685146b089ee53b8d6 325 PANTHER PTHR11432:SF8 1 321 1.3E-243 T 22-04-2016 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 7.2E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 7.2E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 7.2E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 7.2E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 7.2E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 7.2E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PANTHER PTHR12737:SF13 149 291 3.5E-125 T 22-04-2016 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PANTHER PTHR12737:SF13 2 91 3.5E-125 T 22-04-2016 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PANTHER PTHR12737:SF13 307 406 3.5E-125 T 22-04-2016 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 SUPERFAMILY SSF55909 4 406 1.25E-132 T 22-04-2016 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 TIGRFAM TIGR01078 arcA: arginine deiminase 5 406 3.9E-160 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PIRSF PIRSF006356 1 406 3.7E-149 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.125 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PANTHER PTHR12737 149 291 3.5E-125 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PANTHER PTHR12737 2 91 3.5E-125 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 PANTHER PTHR12737 307 406 3.5E-125 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 Gene3D G3DSA:3.75.10.10 1 67 2.0E-128 T 22-04-2016 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 Gene3D G3DSA:3.75.10.10 149 406 2.0E-128 T 22-04-2016 APECO1_RS24685 7ce15a62345fde8399e3310381e377c9 406 Pfam PF02274 Amidinotransferase 18 403 3.3E-94 T 22-04-2016 APECO1_RS25445 5369074ca3cd24078b7ff0a8d6228a6e 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 7.9E-99 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS25445 5369074ca3cd24078b7ff0a8d6228a6e 232 Pfam PF05100 Phage minor tail protein L 29 230 8.4E-97 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS00670 e1f11b794d647462366a094eeaf6a8b8 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 24 106 1.7E-8 T 22-04-2016 IPR019114 Chaperone lipoprotein, PulS/OutS-like APECO1_RS00670 e1f11b794d647462366a094eeaf6a8b8 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 1 115 4.0E-63 T 22-04-2016 APECO1_RS07245 8cd0afdf4a02d4527a397ca1fe1941fc 104 TIGRFAM TIGR02981 phageshock_pspE: phage shock operon rhodanese PspE 3 103 1.1E-63 T 22-04-2016 IPR014323 Phage shock protein, PspE KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APECO1_RS07245 8cd0afdf4a02d4527a397ca1fe1941fc 104 Pfam PF00581 Rhodanese-like domain 22 89 3.8E-12 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS07245 8cd0afdf4a02d4527a397ca1fe1941fc 104 SMART SM00450 7 103 1.7E-13 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS07245 8cd0afdf4a02d4527a397ca1fe1941fc 104 Gene3D G3DSA:3.40.250.10 23 96 3.7E-22 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS07245 8cd0afdf4a02d4527a397ca1fe1941fc 104 SUPERFAMILY SSF52821 23 93 3.4E-19 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS01755 e7285612f70885c649cb5709e8de39fc 318 PANTHER PTHR32196:SF39 12 306 2.4E-109 T 22-04-2016 APECO1_RS01755 e7285612f70885c649cb5709e8de39fc 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 305 1.4E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS01755 e7285612f70885c649cb5709e8de39fc 318 PANTHER PTHR32196 12 306 2.4E-109 T 22-04-2016 APECO1_RS24085 2a0aa537b76cdffcf3f95666d621742b 433 PANTHER PTHR36106:SF2 1 433 0.0 T 22-04-2016 APECO1_RS24085 2a0aa537b76cdffcf3f95666d621742b 433 PIRSF PIRSF004539 1 433 2.0E-181 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APECO1_RS24085 2a0aa537b76cdffcf3f95666d621742b 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 2.2E-210 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APECO1_RS24085 2a0aa537b76cdffcf3f95666d621742b 433 PANTHER PTHR36106 1 433 0.0 T 22-04-2016 APECO1_RS24085 2a0aa537b76cdffcf3f95666d621742b 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 3.2E-145 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APECO1_RS04270 f761fa7a97ed6eb97d4caf4b4de9ca73 552 PANTHER PTHR32182 1 551 0.0 T 22-04-2016 APECO1_RS04270 f761fa7a97ed6eb97d4caf4b4de9ca73 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 4.8E-155 T 22-04-2016 IPR022602 Protein of unknown function DUF2813 APECO1_RS04270 f761fa7a97ed6eb97d4caf4b4de9ca73 552 SUPERFAMILY SSF52540 1 331 2.17E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04270 f761fa7a97ed6eb97d4caf4b4de9ca73 552 PANTHER PTHR32182:SF12 1 551 0.0 T 22-04-2016 APECO1_RS04270 f761fa7a97ed6eb97d4caf4b4de9ca73 552 Gene3D G3DSA:3.40.50.300 1 343 3.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS22185 2e37f96e42d905c830ebb64988106e29 302 Gene3D G3DSA:3.40.50.1820 5 297 2.2E-83 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS22185 2e37f96e42d905c830ebb64988106e29 302 SUPERFAMILY SSF53474 25 297 1.47E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS22185 2e37f96e42d905c830ebb64988106e29 302 PANTHER PTHR23024:SF24 43 297 1.2E-77 T 22-04-2016 APECO1_RS22185 2e37f96e42d905c830ebb64988106e29 302 PANTHER PTHR23024 43 297 1.2E-77 T 22-04-2016 APECO1_RS22185 2e37f96e42d905c830ebb64988106e29 302 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 - T 22-04-2016 IPR033140 Lipase, GDXG, putative serine active site APECO1_RS22185 2e37f96e42d905c830ebb64988106e29 302 Pfam PF07859 alpha/beta hydrolase fold 75 280 1.4E-64 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APECO1_RS15180 3ab1e503e3e953ea6b91720eb832faaf 52 PANTHER PTHR21659 3 51 1.9E-18 T 22-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 APECO1_RS15180 3ab1e503e3e953ea6b91720eb832faaf 52 Pfam PF01679 Proteolipid membrane potential modulator 3 48 1.6E-18 T 22-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 APECO1_RS15180 3ab1e503e3e953ea6b91720eb832faaf 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 22-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 APECO1_RS15555 f1530dd4da284914226f7b2733fc4d3c 218 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 74 79 - T 22-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 APECO1_RS15555 f1530dd4da284914226f7b2733fc4d3c 218 Pfam PF00149 Calcineurin-like phosphoesterase 16 188 1.1E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS15555 f1530dd4da284914226f7b2733fc4d3c 218 Gene3D G3DSA:3.60.21.10 5 217 1.4E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS15555 f1530dd4da284914226f7b2733fc4d3c 218 PANTHER PTHR24032 1 218 2.1E-146 T 22-04-2016 APECO1_RS15555 f1530dd4da284914226f7b2733fc4d3c 218 PANTHER PTHR24032:SF33 1 218 2.1E-146 T 22-04-2016 APECO1_RS15555 f1530dd4da284914226f7b2733fc4d3c 218 SUPERFAMILY SSF56300 6 217 1.35E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS25415 6a91a9d34b56bb51e1e98d0c3e9f65e8 133 Pfam PF06141 Phage minor tail protein U 3 131 1.2E-48 T 22-04-2016 IPR009312 Minor tail protein U-like APECO1_RS25415 6a91a9d34b56bb51e1e98d0c3e9f65e8 133 SUPERFAMILY SSF143749 3 132 2.62E-51 T 22-04-2016 IPR009312 Minor tail protein U-like APECO1_RS25520 641b094eec9c13e543b311f76ec6fb3d 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 19.041 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 APECO1_RS25520 641b094eec9c13e543b311f76ec6fb3d 53 PIRSF PIRSF036466 1 53 8.3E-21 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 APECO1_RS25520 641b094eec9c13e543b311f76ec6fb3d 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.0E-13 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 6.6E-46 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.9E-52 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.2E-140 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 Gene3D G3DSA:3.40.50.720 1 146 1.3E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 61.568 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 PIRSF PIRSF000102 1 310 6.7E-60 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 PANTHER PTHR11540 1 312 1.3E-240 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 SUPERFAMILY SSF51735 1 145 3.51E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 SUPERFAMILY SSF56327 146 311 2.16E-42 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 Gene3D G3DSA:3.90.110.10 147 311 6.9E-64 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APECO1_RS18590 e900d4236746abfdd6436dab2615ca4b 312 PANTHER PTHR11540:SF22 1 312 1.3E-240 T 22-04-2016 APECO1_RS12585 6d714dc183b96f255871374e6a71eef9 111 PANTHER PTHR30561:SF9 1 108 2.0E-44 T 22-04-2016 APECO1_RS12585 6d714dc183b96f255871374e6a71eef9 111 PANTHER PTHR30561 1 108 2.0E-44 T 22-04-2016 APECO1_RS12585 6d714dc183b96f255871374e6a71eef9 111 Pfam PF00892 EamA-like transporter family 3 107 7.3E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS12585 6d714dc183b96f255871374e6a71eef9 111 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 111 28.71 T 22-04-2016 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE UniPathway: UPA00030 APECO1_RS12585 6d714dc183b96f255871374e6a71eef9 111 SUPERFAMILY SSF103481 5 107 2.48E-15 T 22-04-2016 APECO1_RS19795 82e8b0bc1d1c55c6e10d2391eafe50e7 40 Pfam PF12035 Protein of unknown function (DUF3521) 7 38 1.7E-9 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS10590 1437a51e83b3589c0254b929c794fa55 114 Pfam PF11367 Protein of unknown function (DUF3168) 10 110 1.1E-10 T 22-04-2016 IPR021508 Protein of unknown function DUF3168 APECO1_RS18865 7a67a861e23485adf7cdf01e617b1dfa 184 Gene3D G3DSA:2.160.10.10 7 176 5.5E-45 T 22-04-2016 APECO1_RS18865 7a67a861e23485adf7cdf01e617b1dfa 184 PANTHER PTHR13061 5 182 2.1E-74 T 22-04-2016 APECO1_RS18865 7a67a861e23485adf7cdf01e617b1dfa 184 SUPERFAMILY SSF51161 4 176 1.25E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like APECO1_RS18865 7a67a861e23485adf7cdf01e617b1dfa 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 47 3.7E-5 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS18865 7a67a861e23485adf7cdf01e617b1dfa 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.4E-7 T 22-04-2016 IPR001451 Hexapeptide repeat APECO1_RS24375 0373f0dcb85ad5deb6a8d78e37a5b8da 101 PANTHER PTHR33843 1 101 1.6E-48 T 22-04-2016 APECO1_RS24375 0373f0dcb85ad5deb6a8d78e37a5b8da 101 Gene3D G3DSA:3.40.50.270 4 93 1.4E-17 T 22-04-2016 APECO1_RS24375 0373f0dcb85ad5deb6a8d78e37a5b8da 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 79 1.1E-13 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS24375 0373f0dcb85ad5deb6a8d78e37a5b8da 101 SUPERFAMILY SSF52794 3 95 7.59E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS24375 0373f0dcb85ad5deb6a8d78e37a5b8da 101 PANTHER PTHR33843:SF1 1 101 1.6E-48 T 22-04-2016 APECO1_RS02505 74fa3db830f846eda8469a011e6cc16a 338 SUPERFAMILY SSF54523 243 338 9.42E-22 T 22-04-2016 APECO1_RS02505 74fa3db830f846eda8469a011e6cc16a 338 Pfam PF03895 YadA-like C-terminal region 262 338 1.2E-16 T 22-04-2016 IPR005594 YadA-like, C-terminal APECO1_RS02505 74fa3db830f846eda8469a011e6cc16a 338 Gene3D G3DSA:3.30.1300.30 240 338 7.1E-24 T 22-04-2016 APECO1_RS07000 cf3b876952bbf8769cb7738e4e4fec52 293 SMART SM00481 10 77 1.9E-18 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APECO1_RS07000 cf3b876952bbf8769cb7738e4e4fec52 293 Gene3D G3DSA:3.20.20.140 164 268 1.8E-41 T 22-04-2016 APECO1_RS07000 cf3b876952bbf8769cb7738e4e4fec52 293 Gene3D G3DSA:3.20.20.140 10 95 1.8E-41 T 22-04-2016 APECO1_RS07000 cf3b876952bbf8769cb7738e4e4fec52 293 PANTHER PTHR30007 8 292 1.1E-113 T 22-04-2016 APECO1_RS07000 cf3b876952bbf8769cb7738e4e4fec52 293 Pfam PF02811 PHP domain 11 115 1.2E-6 T 22-04-2016 IPR004013 PHP domain GO:0003824 APECO1_RS07000 cf3b876952bbf8769cb7738e4e4fec52 293 SUPERFAMILY SSF89550 172 285 1.19E-51 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APECO1_RS07000 cf3b876952bbf8769cb7738e4e4fec52 293 SUPERFAMILY SSF89550 9 90 1.19E-51 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APECO1_RS07000 cf3b876952bbf8769cb7738e4e4fec52 293 PANTHER PTHR30007:SF4 8 292 1.1E-113 T 22-04-2016 APECO1_RS15915 6b621aeb1fcde3c62d7f5c2fa97d585d 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 1.7E-23 T 22-04-2016 IPR006696 Protein of unknown function DUF423 APECO1_RS15915 6b621aeb1fcde3c62d7f5c2fa97d585d 131 PANTHER PTHR10584:SF191 6 67 9.3E-24 T 22-04-2016 APECO1_RS15915 6b621aeb1fcde3c62d7f5c2fa97d585d 131 PANTHER PTHR10584 6 67 9.3E-24 T 22-04-2016 APECO1_RS20715 10468c4d2ccdc689eaae5767bd2b782a 417 Pfam PF04932 O-Antigen ligase 197 349 2.5E-12 T 22-04-2016 IPR007016 O-antigen ligase-related APECO1_RS23670 ec6c275c48239da1257360172bbeadcb 64 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 3 64 1.4E-41 T 22-04-2016 IPR009301 Protein of unknown function DUF957 APECO1_RS19915 0dee36c814332d103dda94b8a40fb817 314 PANTHER PTHR30465 1 308 7.2E-189 T 22-04-2016 APECO1_RS19915 0dee36c814332d103dda94b8a40fb817 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 308 5.7E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19915 0dee36c814332d103dda94b8a40fb817 314 Gene3D G3DSA:1.10.3720.10 89 304 1.5E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS19915 0dee36c814332d103dda94b8a40fb817 314 PANTHER PTHR30465:SF21 1 308 7.2E-189 T 22-04-2016 APECO1_RS19915 0dee36c814332d103dda94b8a40fb817 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 314 4.8E-169 T 22-04-2016 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 APECO1_RS19915 0dee36c814332d103dda94b8a40fb817 314 SUPERFAMILY SSF161098 94 308 1.85E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18185 506620f5c4521b6be503bb2f21344c25 131 SUPERFAMILY SSF52980 17 125 2.79E-23 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APECO1_RS18185 506620f5c4521b6be503bb2f21344c25 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 10 131 1.1E-60 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 APECO1_RS18185 506620f5c4521b6be503bb2f21344c25 131 Pfam PF02021 Uncharacterised protein family UPF0102 24 114 6.8E-24 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 APECO1_RS18185 506620f5c4521b6be503bb2f21344c25 131 PANTHER PTHR34039 12 131 5.5E-44 T 22-04-2016 APECO1_RS18185 506620f5c4521b6be503bb2f21344c25 131 PANTHER PTHR34039:SF1 12 131 5.5E-44 T 22-04-2016 APECO1_RS18185 506620f5c4521b6be503bb2f21344c25 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 23.673 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 APECO1_RS18185 506620f5c4521b6be503bb2f21344c25 131 Gene3D G3DSA:3.40.1350.10 24 128 2.7E-37 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APECO1_RS23735 9fa507d7a5e7d6b6ebda65b781e27162 294 Pfam PF01926 50S ribosome-binding GTPase 41 141 6.5E-14 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APECO1_RS23735 9fa507d7a5e7d6b6ebda65b781e27162 294 PANTHER PTHR11649 193 223 3.4E-21 T 22-04-2016 APECO1_RS23735 9fa507d7a5e7d6b6ebda65b781e27162 294 PANTHER PTHR11649 39 176 3.4E-21 T 22-04-2016 APECO1_RS23735 9fa507d7a5e7d6b6ebda65b781e27162 294 SUPERFAMILY SSF52540 14 166 1.25E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23735 9fa507d7a5e7d6b6ebda65b781e27162 294 Gene3D G3DSA:3.40.50.300 21 50 3.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS23735 9fa507d7a5e7d6b6ebda65b781e27162 294 Gene3D G3DSA:3.40.50.300 51 224 2.2E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS00005 13fe4258b37e32edda386faa50ec5fdf 21 Hamap MF_01907 Thr operon leader peptide [thrL]. 1 21 11.934 T 22-04-2016 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 APECO1_RS00005 13fe4258b37e32edda386faa50ec5fdf 21 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 21 2.2E-9 T 22-04-2016 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 APECO1_RS00005 13fe4258b37e32edda386faa50ec5fdf 21 Pfam PF08254 Threonine leader peptide 1 21 4.9E-10 T 22-04-2016 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 APECO1_RS24165 7fd9360c2b37e65328cd3f220502fd9b 131 Gene3D G3DSA:1.20.1300.10 3 130 1.5E-59 T 22-04-2016 APECO1_RS24165 7fd9360c2b37e65328cd3f220502fd9b 131 PIRSF PIRSF000180 2 130 4.8E-63 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APECO1_RS24165 7fd9360c2b37e65328cd3f220502fd9b 131 Pfam PF02300 Fumarate reductase subunit C 3 128 1.0E-56 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APECO1_RS24165 7fd9360c2b37e65328cd3f220502fd9b 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 30.453 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APECO1_RS24165 7fd9360c2b37e65328cd3f220502fd9b 131 SUPERFAMILY SSF81343 2 131 5.36E-59 T 22-04-2016 APECO1_RS24165 7fd9360c2b37e65328cd3f220502fd9b 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 129 4.0E-56 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APECO1_RS04465 b802f1ca245dcb73454757452722334d 738 Gene3D G3DSA:3.40.50.300 267 294 7.3E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04465 b802f1ca245dcb73454757452722334d 738 Gene3D G3DSA:3.40.50.300 441 584 7.3E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04465 b802f1ca245dcb73454757452722334d 738 Gene3D G3DSA:3.40.50.300 2 39 7.3E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04465 b802f1ca245dcb73454757452722334d 738 Gene3D G3DSA:3.40.50.300 344 392 7.3E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04465 b802f1ca245dcb73454757452722334d 738 Pfam PF13166 AAA domain 18 716 3.0E-127 T 22-04-2016 IPR026866 P-loop containing protein CR006/PrrC APECO1_RS04465 b802f1ca245dcb73454757452722334d 738 SUPERFAMILY SSF52540 2 132 4.35E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS04465 b802f1ca245dcb73454757452722334d 738 SUPERFAMILY SSF52540 362 578 4.35E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS10525 c38688548a6d87f8f26f8ec44f130ca0 259 SUPERFAMILY SSF53474 13 255 4.56E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS10525 c38688548a6d87f8f26f8ec44f130ca0 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.8E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS10525 c38688548a6d87f8f26f8ec44f130ca0 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 1.8E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS10525 c38688548a6d87f8f26f8ec44f130ca0 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 43 58 1.8E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS10525 c38688548a6d87f8f26f8ec44f130ca0 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 1.8E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APECO1_RS10525 c38688548a6d87f8f26f8ec44f130ca0 259 Pfam PF03096 Ndr family 13 228 1.9E-18 T 22-04-2016 IPR004142 NDRG APECO1_RS10525 c38688548a6d87f8f26f8ec44f130ca0 259 Gene3D G3DSA:3.40.50.1820 10 257 1.1E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS10525 c38688548a6d87f8f26f8ec44f130ca0 259 PANTHER PTHR10992 14 256 5.5E-47 T 22-04-2016 APECO1_RS25015 a52cbc7a3912be43fa2e975bf334a9dc 286 Pfam PF06977 SdiA-regulated 38 281 1.1E-91 T 22-04-2016 IPR009722 SdiA-regulated APECO1_RS25015 a52cbc7a3912be43fa2e975bf334a9dc 286 Gene3D G3DSA:2.120.10.30 54 283 7.0E-13 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APECO1_RS25015 a52cbc7a3912be43fa2e975bf334a9dc 286 SUPERFAMILY SSF50956 15 282 7.72E-38 T 22-04-2016 APECO1_RS24355 1fca25c1db2244595dfca4eb0e464baa 249 Gene3D G3DSA:3.40.50.1820 2 249 2.1E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS24355 1fca25c1db2244595dfca4eb0e464baa 249 Pfam PF00326 Prolyl oligopeptidase family 86 234 3.3E-11 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APECO1_RS24355 1fca25c1db2244595dfca4eb0e464baa 249 SUPERFAMILY SSF53474 9 249 2.03E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS24355 1fca25c1db2244595dfca4eb0e464baa 249 PANTHER PTHR10992 15 215 6.6E-17 T 22-04-2016 APECO1_RS24355 1fca25c1db2244595dfca4eb0e464baa 249 PANTHER PTHR10992:SF732 15 215 6.6E-17 T 22-04-2016 APECO1_RS22065 f8b7ddda8964bcd3d08b3009bcc0400a 310 SUPERFAMILY SSF69593 19 296 6.02E-25 T 22-04-2016 APECO1_RS22065 f8b7ddda8964bcd3d08b3009bcc0400a 310 SMART SM00563 97 224 1.4E-16 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APECO1_RS22065 f8b7ddda8964bcd3d08b3009bcc0400a 310 PANTHER PTHR10983:SF15 1 307 2.6E-150 T 22-04-2016 APECO1_RS22065 f8b7ddda8964bcd3d08b3009bcc0400a 310 PANTHER PTHR10983 1 307 2.6E-150 T 22-04-2016 APECO1_RS22065 f8b7ddda8964bcd3d08b3009bcc0400a 310 Pfam PF01553 Acyltransferase 84 214 6.9E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.6E-29 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 4.2E-16 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 SUPERFAMILY SSF56784 5 185 2.67E-46 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 1.4E-66 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 PANTHER PTHR18901:SF29 1 186 1.5E-74 T 22-04-2016 APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 PANTHER PTHR18901 1 186 1.5E-74 T 22-04-2016 APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.9E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.9E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 3.9E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 3.9E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 Gene3D G3DSA:1.10.150.240 19 75 3.3E-4 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 Gene3D G3DSA:3.40.50.1000 90 185 1.2E-37 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS15315 c17a6b2b10d2fa8dfc47691a19199fb9 188 Gene3D G3DSA:3.40.50.1000 4 18 1.2E-37 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS18380 3a22854b60f2d397294992484f1a8b31 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.1E-37 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APECO1_RS18380 3a22854b60f2d397294992484f1a8b31 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.3E-45 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18380 3a22854b60f2d397294992484f1a8b31 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.783 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18380 3a22854b60f2d397294992484f1a8b31 103 PANTHER PTHR21349 1 101 6.4E-46 T 22-04-2016 APECO1_RS18380 3a22854b60f2d397294992484f1a8b31 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS18380 3a22854b60f2d397294992484f1a8b31 103 SUPERFAMILY SSF141091 1 102 4.45E-37 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APECO1_RS24455 8304e46e2858e6d77beb6354b680c486 258 PANTHER PTHR11941 17 250 3.4E-58 T 22-04-2016 APECO1_RS24455 8304e46e2858e6d77beb6354b680c486 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 257 5.1E-45 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APECO1_RS24455 8304e46e2858e6d77beb6354b680c486 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APECO1_RS24455 8304e46e2858e6d77beb6354b680c486 258 Gene3D G3DSA:3.90.226.10 2 250 7.6E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS24455 8304e46e2858e6d77beb6354b680c486 258 SUPERFAMILY SSF52096 1 256 2.67E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS21475 a1d7a82621861acf64f75e6389f719d2 87 Gene3D G3DSA:3.30.70.260 1 74 3.3E-14 T 22-04-2016 APECO1_RS21475 a1d7a82621861acf64f75e6389f719d2 87 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 0.005 T 22-04-2016 APECO1_RS21475 a1d7a82621861acf64f75e6389f719d2 87 SUPERFAMILY SSF55021 3 75 4.12E-12 T 22-04-2016 APECO1_RS21475 a1d7a82621861acf64f75e6389f719d2 87 Pfam PF13710 ACT domain 13 73 1.6E-27 T 22-04-2016 APECO1_RS02980 c15b780cb501777a7a7b8bc76143c886 292 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 21 291 2.2E-108 T 22-04-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APECO1_RS02980 c15b780cb501777a7a7b8bc76143c886 292 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 3 292 182.47 T 22-04-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APECO1_RS02980 c15b780cb501777a7a7b8bc76143c886 292 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 26 290 1.9E-82 T 22-04-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APECO1_RS02980 c15b780cb501777a7a7b8bc76143c886 292 PANTHER PTHR30201 16 292 1.4E-96 T 22-04-2016 APECO1_RS09145 06fae8bc6a882323282c58129bdf9b9e 277 PANTHER PTHR31756:SF3 1 277 3.2E-131 T 22-04-2016 APECO1_RS09145 06fae8bc6a882323282c58129bdf9b9e 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 72.949 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein APECO1_RS09145 06fae8bc6a882323282c58129bdf9b9e 277 PANTHER PTHR31756 1 277 3.2E-131 T 22-04-2016 APECO1_RS09145 06fae8bc6a882323282c58129bdf9b9e 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 4.7E-73 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 APECO1_RS01805 ae38e7234cbe4ca1fac2f3d33704b5ef 419 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 7.5E-83 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS01805 ae38e7234cbe4ca1fac2f3d33704b5ef 419 PANTHER PTHR30569 1 419 6.9E-113 T 22-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 APECO1_RS14215 9a3fd7f20148a29ab7da92eeafb39919 418 SUPERFAMILY SSF56349 98 383 5.59E-59 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS14215 9a3fd7f20148a29ab7da92eeafb39919 418 PANTHER PTHR30629 1 417 8.9E-84 T 22-04-2016 APECO1_RS14215 9a3fd7f20148a29ab7da92eeafb39919 418 Gene3D G3DSA:1.10.150.130 98 192 1.9E-15 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APECO1_RS14215 9a3fd7f20148a29ab7da92eeafb39919 418 Gene3D G3DSA:1.10.443.10 202 381 2.0E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS14215 9a3fd7f20148a29ab7da92eeafb39919 418 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 112 148 8.0E-5 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APECO1_RS14215 9a3fd7f20148a29ab7da92eeafb39919 418 Pfam PF00589 Phage integrase family 204 373 3.3E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS14215 9a3fd7f20148a29ab7da92eeafb39919 418 Pfam PF13356 Domain of unknown function (DUF4102) 2 87 8.8E-16 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 APECO1_RS06910 aafb553ec950685cc1d3754275c4a079 69 SUPERFAMILY SSF102712 5 69 1.57E-7 T 22-04-2016 APECO1_RS06910 aafb553ec950685cc1d3754275c4a079 69 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 69 1.2E-7 T 22-04-2016 IPR028090 JAB domain, prokaryotic APECO1_RS06910 aafb553ec950685cc1d3754275c4a079 69 Gene3D G3DSA:3.40.140.10 4 69 9.1E-8 T 22-04-2016 APECO1_RS06855 0fc5399995f60152fe7f68813aeeef47 342 Gene3D G3DSA:3.30.1930.10 156 286 2.5E-60 T 22-04-2016 APECO1_RS06855 0fc5399995f60152fe7f68813aeeef47 342 Gene3D G3DSA:3.15.30.10 1 155 9.0E-92 T 22-04-2016 APECO1_RS06855 0fc5399995f60152fe7f68813aeeef47 342 Gene3D G3DSA:3.15.30.10 287 330 9.0E-92 T 22-04-2016 APECO1_RS06855 0fc5399995f60152fe7f68813aeeef47 342 Pfam PF03864 Phage major capsid protein E 4 339 2.8E-65 T 22-04-2016 IPR005564 Major capsid protein GpE GO:0019028 APECO1_RS01000 2e1349c66dbe48282d5d7bf0f0bc79f1 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 1.0E-26 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 APECO1_RS01000 2e1349c66dbe48282d5d7bf0f0bc79f1 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 3.4E-34 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 APECO1_RS01000 2e1349c66dbe48282d5d7bf0f0bc79f1 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.974 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 APECO1_RS10560 b4b31fdff88036b76884b30b78275acb 232 Pfam PF05100 Phage minor tail protein L 29 230 2.8E-97 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS10560 b4b31fdff88036b76884b30b78275acb 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 1.8E-100 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS07780 69ffe4f708b1548f833bb7af4d20abec 73 PANTHER PTHR30477 1 41 5.5E-14 T 22-04-2016 APECO1_RS07780 69ffe4f708b1548f833bb7af4d20abec 73 Pfam PF00950 ABC 3 transport family 3 45 5.2E-8 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APECO1_RS07780 69ffe4f708b1548f833bb7af4d20abec 73 PANTHER PTHR30477:SF9 1 41 5.5E-14 T 22-04-2016 APECO1_RS05860 2335cf07ddad2c1fcf3d3dfd3c7436f5 98 Pfam PF05269 Bacteriophage CII protein 1 92 2.6E-35 T 22-04-2016 IPR007933 Transcription activator CII GO:0003677|GO:0006355 APECO1_RS05860 2335cf07ddad2c1fcf3d3dfd3c7436f5 98 Gene3D G3DSA:1.10.8.320 16 54 1.7E-5 T 22-04-2016 APECO1_RS10300 58d9aa5e02092c2f775a625570f56326 401 Pfam PF04143 Sulphur transport 237 387 4.2E-24 T 22-04-2016 IPR007272 Sulphur transport domain APECO1_RS10300 58d9aa5e02092c2f775a625570f56326 401 Pfam PF04143 Sulphur transport 3 160 4.1E-26 T 22-04-2016 IPR007272 Sulphur transport domain APECO1_RS10300 58d9aa5e02092c2f775a625570f56326 401 PANTHER PTHR30574:SF6 1 344 2.1E-257 T 22-04-2016 APECO1_RS10300 58d9aa5e02092c2f775a625570f56326 401 PANTHER PTHR30574 1 344 2.1E-257 T 22-04-2016 APECO1_RS15970 2058c54c40da8459365c28fb34dc3ca4 512 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 46 508 4.0E-199 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath APECO1_RS15970 2058c54c40da8459365c28fb34dc3ca4 512 PANTHER PTHR35565:SF1 1 42 0.0 T 22-04-2016 APECO1_RS15970 2058c54c40da8459365c28fb34dc3ca4 512 PANTHER PTHR35565:SF1 60 512 0.0 T 22-04-2016 APECO1_RS15970 2058c54c40da8459365c28fb34dc3ca4 512 PANTHER PTHR35565 1 42 0.0 T 22-04-2016 APECO1_RS15970 2058c54c40da8459365c28fb34dc3ca4 512 PANTHER PTHR35565 60 512 0.0 T 22-04-2016 APECO1_RS15970 2058c54c40da8459365c28fb34dc3ca4 512 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 89 508 2.1E-166 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath APECO1_RS02710 aeb5291128371b97547d83955beba43d 99 SUPERFAMILY SSF56349 8 88 8.24E-9 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS02710 aeb5291128371b97547d83955beba43d 99 Pfam PF00589 Phage integrase family 9 89 2.6E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS02710 aeb5291128371b97547d83955beba43d 99 Gene3D G3DSA:1.10.443.10 9 92 1.7E-8 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS05760 f25df791cfb8b491bf1114cc43d24a20 73 PANTHER PTHR38777 1 71 1.0E-11 T 22-04-2016 APECO1_RS05760 f25df791cfb8b491bf1114cc43d24a20 73 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 64 4.7E-9 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APECO1_RS05760 f25df791cfb8b491bf1114cc43d24a20 73 PANTHER PTHR38777:SF1 1 71 1.0E-11 T 22-04-2016 APECO1_RS05760 f25df791cfb8b491bf1114cc43d24a20 73 SUPERFAMILY SSF57716 34 69 1.57E-5 T 22-04-2016 APECO1_RS17275 a877b45cd5ab13c71ade9f179fbb0c9c 134 PANTHER PTHR34309 1 132 5.6E-73 T 22-04-2016 APECO1_RS17275 a877b45cd5ab13c71ade9f179fbb0c9c 134 PANTHER PTHR34309:SF4 1 132 5.6E-73 T 22-04-2016 APECO1_RS17275 a877b45cd5ab13c71ade9f179fbb0c9c 134 SUPERFAMILY SSF143744 2 132 1.26E-36 T 22-04-2016 APECO1_RS17275 a877b45cd5ab13c71ade9f179fbb0c9c 134 Pfam PF03928 Haem-degrading 7 129 1.4E-32 T 22-04-2016 IPR005624 Haem-degrading APECO1_RS03020 dc05744b7c92275c2a31593559f62114 461 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 451 5.5E-136 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 APECO1_RS03020 dc05744b7c92275c2a31593559f62114 461 PANTHER PTHR42002:SF2 2 458 0.0 T 22-04-2016 APECO1_RS03020 dc05744b7c92275c2a31593559f62114 461 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 441 1.4E-197 T 22-04-2016 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 APECO1_RS03020 dc05744b7c92275c2a31593559f62114 461 PANTHER PTHR42002 2 458 0.0 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 PANTHER PTHR23083:SF414 901 1011 1.6E-65 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 PANTHER PTHR23083:SF414 165 213 1.6E-65 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 PANTHER PTHR23083:SF414 465 611 1.6E-65 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 PANTHER PTHR23083:SF414 751 822 1.6E-65 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 SUPERFAMILY SSF48452 736 813 4.83E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 SUPERFAMILY SSF48452 569 607 4.83E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 SUPERFAMILY SSF48452 892 1009 7.32E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 SMART SM00028 778 812 34.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 SMART SM00028 744 777 0.85 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 SMART SM00028 495 528 92.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 SMART SM00028 535 568 73.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 SMART SM00028 569 602 0.015 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 Pfam PF13432 Tetratricopeptide repeat 754 813 0.0076 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 Pfam PF13432 Tetratricopeptide repeat 542 602 2.4E-4 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 SUPERFAMILY SSF48452 484 623 3.08E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 PANTHER PTHR23083 901 1011 1.6E-65 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 PANTHER PTHR23083 165 213 1.6E-65 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 PANTHER PTHR23083 465 611 1.6E-65 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 PANTHER PTHR23083 751 822 1.6E-65 T 22-04-2016 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 Gene3D G3DSA:1.25.40.10 891 1004 4.1E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 Gene3D G3DSA:1.25.40.10 736 825 4.1E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 Gene3D G3DSA:1.25.40.10 482 640 5.1E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS14415 e83524c25198789c0d0d5e07a8b9e1c4 1093 Pfam PF17128 Domain of unknown function (DUF5107) 39 343 3.2E-68 T 22-04-2016 IPR033396 Domain of unknown function DUF5107 APECO1_RS04500 0c4140e841a416e34844b45488bd94ed 67 Pfam PF05489 Phage Tail Protein X 1 60 1.3E-30 T 22-04-2016 IPR008861 Phage Tail Protein X-like APECO1_RS05385 9a2508c16b43a7b2ad4c6f749a13e8aa 215 Gene3D G3DSA:1.10.10.10 3 87 1.3E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS05385 9a2508c16b43a7b2ad4c6f749a13e8aa 215 Gene3D G3DSA:1.10.10.10 95 172 1.1E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS05385 9a2508c16b43a7b2ad4c6f749a13e8aa 215 PANTHER PTHR38768:SF1 1 215 2.3E-97 T 22-04-2016 APECO1_RS05385 9a2508c16b43a7b2ad4c6f749a13e8aa 215 SUPERFAMILY SSF46785 2 84 1.68E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS05385 9a2508c16b43a7b2ad4c6f749a13e8aa 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 34.739 T 22-04-2016 IPR007432 Protein of unknown function DUF480 APECO1_RS05385 9a2508c16b43a7b2ad4c6f749a13e8aa 215 SUPERFAMILY SSF46785 90 172 2.72E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS05385 9a2508c16b43a7b2ad4c6f749a13e8aa 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 7.3E-64 T 22-04-2016 IPR007432 Protein of unknown function DUF480 APECO1_RS05385 9a2508c16b43a7b2ad4c6f749a13e8aa 215 PANTHER PTHR38768 1 215 2.3E-97 T 22-04-2016 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 PANTHER PTHR11851:SF135 411 927 0.0 T 22-04-2016 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 PANTHER PTHR11851:SF135 1 394 0.0 T 22-04-2016 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 Gene3D G3DSA:3.30.830.10 730 959 1.1E-60 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 Pfam PF00675 Insulinase (Peptidase family M16) 54 191 9.5E-39 T 22-04-2016 IPR011765 Peptidase M16, N-terminal APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 PANTHER PTHR11851 411 927 0.0 T 22-04-2016 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 PANTHER PTHR11851 1 394 0.0 T 22-04-2016 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 SUPERFAMILY SSF63411 265 502 2.27E-66 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 SUPERFAMILY SSF63411 33 261 7.14E-51 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 Gene3D G3DSA:3.30.830.10 274 506 5.5E-64 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 Gene3D G3DSA:3.30.830.10 30 266 1.4E-63 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 SUPERFAMILY SSF63411 735 957 4.19E-45 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 SUPERFAMILY SSF63411 504 728 1.12E-48 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 Pfam PF05193 Peptidase M16 inactive domain 216 394 3.1E-20 T 22-04-2016 IPR007863 Peptidase M16, C-terminal APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 Pfam PF05193 Peptidase M16 inactive domain 681 856 5.4E-14 T 22-04-2016 IPR007863 Peptidase M16, C-terminal APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 Gene3D G3DSA:3.30.830.10 507 729 4.0E-67 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APECO1_RS16140 bba46b3585f22ca485bcf726db6d84c0 962 Pfam PF16187 Middle or third domain of peptidase_M16 400 676 8.8E-55 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain APECO1_RS24750 46473193ddfe9702407a385906b69948 439 PANTHER PTHR30354:SF1 1 439 4.5E-242 T 22-04-2016 APECO1_RS24750 46473193ddfe9702407a385906b69948 439 PANTHER PTHR30354 1 439 4.5E-242 T 22-04-2016 APECO1_RS24750 46473193ddfe9702407a385906b69948 439 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 2.4E-199 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS24750 46473193ddfe9702407a385906b69948 439 PIRSF PIRSF002746 1 439 3.8E-157 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS24750 46473193ddfe9702407a385906b69948 439 Pfam PF02447 GntP family permease 1 436 1.6E-183 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APECO1_RS01910 780bfc6c76a714ab4b7c7c161345b075 385 Pfam PF00144 Beta-lactamase 45 357 1.9E-64 T 22-04-2016 IPR001466 Beta-lactamase-related APECO1_RS01910 780bfc6c76a714ab4b7c7c161345b075 385 SUPERFAMILY SSF56601 33 361 1.68E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS01910 780bfc6c76a714ab4b7c7c161345b075 385 PANTHER PTHR22935:SF77 2 356 6.1E-80 T 22-04-2016 APECO1_RS01910 780bfc6c76a714ab4b7c7c161345b075 385 Gene3D G3DSA:3.40.710.10 16 371 1.2E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APECO1_RS01910 780bfc6c76a714ab4b7c7c161345b075 385 PANTHER PTHR22935 2 356 6.1E-80 T 22-04-2016 APECO1_RS10585 27f212fff2ec8cd9b069b71e6a83b780 234 SUPERFAMILY SSF48726 146 233 3.48E-9 T 22-04-2016 IPR007110 Immunoglobulin-like domain GO:0005515 APECO1_RS10585 27f212fff2ec8cd9b069b71e6a83b780 234 Gene3D G3DSA:2.60.40.10 157 233 5.6E-10 T 22-04-2016 IPR013783 Immunoglobulin-like fold APECO1_RS02545 53626ced85a91ce57f69c02df92bf1d9 207 PANTHER PTHR30383 25 200 2.5E-50 T 22-04-2016 APECO1_RS02545 53626ced85a91ce57f69c02df92bf1d9 207 SUPERFAMILY SSF52266 28 203 2.68E-52 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APECO1_RS02545 53626ced85a91ce57f69c02df92bf1d9 207 PANTHER PTHR30383:SF5 25 200 2.5E-50 T 22-04-2016 APECO1_RS02545 53626ced85a91ce57f69c02df92bf1d9 207 Gene3D G3DSA:3.40.50.1110 28 204 2.0E-56 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APECO1_RS02545 53626ced85a91ce57f69c02df92bf1d9 207 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 186 7.2E-26 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APECO1_RS02545 53626ced85a91ce57f69c02df92bf1d9 207 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 29 39 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 APECO1_RS27925 63374352ff23b8c6a8372fefbe95e12f 293 Pfam PF03235 Protein of unknown function DUF262 9 222 4.2E-31 T 22-04-2016 IPR004919 Domain of unknown function DUF262 APECO1_RS27925 63374352ff23b8c6a8372fefbe95e12f 293 PANTHER PTHR35149 1 293 6.6E-57 T 22-04-2016 APECO1_RS27925 63374352ff23b8c6a8372fefbe95e12f 293 PANTHER PTHR35149:SF2 1 293 6.6E-57 T 22-04-2016 APECO1_RS08860 fa5c17838c0a78b7fff2418d71c1f464 135 PANTHER PTHR10374 1 129 9.1E-64 T 22-04-2016 APECO1_RS08860 fa5c17838c0a78b7fff2418d71c1f464 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APECO1_RS08860 fa5c17838c0a78b7fff2418d71c1f464 135 Gene3D G3DSA:3.10.180.10 1 127 3.5E-48 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APECO1_RS08860 fa5c17838c0a78b7fff2418d71c1f464 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APECO1_RS08860 fa5c17838c0a78b7fff2418d71c1f464 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 2.3E-69 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APECO1_RS08860 fa5c17838c0a78b7fff2418d71c1f464 135 SUPERFAMILY SSF54593 1 130 2.69E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APECO1_RS08860 fa5c17838c0a78b7fff2418d71c1f464 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 9.0E-25 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APECO1_RS18785 c94dda82d4f8e182378a634ff36e8365 385 PANTHER PTHR30158 1 384 0.0 T 22-04-2016 APECO1_RS18785 c94dda82d4f8e182378a634ff36e8365 385 Pfam PF00529 HlyD membrane-fusion protein of T1SS 155 359 2.5E-11 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS18785 c94dda82d4f8e182378a634ff36e8365 385 PANTHER PTHR30158:SF4 1 384 0.0 T 22-04-2016 APECO1_RS18785 c94dda82d4f8e182378a634ff36e8365 385 SUPERFAMILY SSF111369 52 299 3.4E-89 T 22-04-2016 APECO1_RS18785 c94dda82d4f8e182378a634ff36e8365 385 Gene3D G3DSA:2.40.50.100 172 207 2.3E-26 T 22-04-2016 APECO1_RS18785 c94dda82d4f8e182378a634ff36e8365 385 Gene3D G3DSA:2.40.50.100 64 97 2.3E-26 T 22-04-2016 APECO1_RS18785 c94dda82d4f8e182378a634ff36e8365 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 292 6.6E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APECO1_RS18785 c94dda82d4f8e182378a634ff36e8365 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 1.5E-86 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APECO1_RS08010 94d20e1e6c65c791332c5e385e0a8b8e 264 PANTHER PTHR30193:SF20 1 259 7.7E-81 T 22-04-2016 APECO1_RS08010 94d20e1e6c65c791332c5e385e0a8b8e 264 Gene3D G3DSA:1.10.3720.10 9 261 2.8E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS08010 94d20e1e6c65c791332c5e385e0a8b8e 264 SUPERFAMILY SSF161098 6 257 6.67E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS08010 94d20e1e6c65c791332c5e385e0a8b8e 264 PANTHER PTHR30193 1 259 7.7E-81 T 22-04-2016 APECO1_RS08010 94d20e1e6c65c791332c5e385e0a8b8e 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 5.3E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04195 7440f0b77e2bde9625bc5e4374bc1cdf 238 SUPERFAMILY SSF161098 8 216 1.7E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04195 7440f0b77e2bde9625bc5e4374bc1cdf 238 Gene3D G3DSA:1.10.3720.10 6 227 1.7E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS04195 7440f0b77e2bde9625bc5e4374bc1cdf 238 PANTHER PTHR30133:SF2 1 238 1.5E-161 T 22-04-2016 APECO1_RS04195 7440f0b77e2bde9625bc5e4374bc1cdf 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 86 2.8E-12 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS04195 7440f0b77e2bde9625bc5e4374bc1cdf 238 PANTHER PTHR30133 1 238 1.5E-161 T 22-04-2016 APECO1_RS04195 7440f0b77e2bde9625bc5e4374bc1cdf 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 230 8.9E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS20790 d6e79c10dcde278631ef0feaa4f88729 406 Pfam PF02441 Flavoprotein 6 133 1.9E-30 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APECO1_RS20790 d6e79c10dcde278631ef0feaa4f88729 406 Gene3D G3DSA:3.40.50.1950 3 182 1.1E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APECO1_RS20790 d6e79c10dcde278631ef0feaa4f88729 406 PANTHER PTHR14359 1 406 4.3E-203 T 22-04-2016 APECO1_RS20790 d6e79c10dcde278631ef0feaa4f88729 406 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 2.1E-73 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APECO1_RS20790 d6e79c10dcde278631ef0feaa4f88729 406 SUPERFAMILY SSF52507 3 180 4.84E-58 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APECO1_RS20790 d6e79c10dcde278631ef0feaa4f88729 406 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 397 8.3E-166 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 APECO1_RS20790 d6e79c10dcde278631ef0feaa4f88729 406 PANTHER PTHR14359:SF20 1 406 4.3E-203 T 22-04-2016 APECO1_RS20790 d6e79c10dcde278631ef0feaa4f88729 406 Gene3D G3DSA:3.40.50.10300 184 404 4.6E-88 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APECO1_RS20790 d6e79c10dcde278631ef0feaa4f88729 406 SUPERFAMILY SSF102645 184 401 6.28E-80 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APECO1_RS20680 f45d5431778b9bf4e8d78e7140adb6b3 319 SUPERFAMILY SSF88713 24 238 1.45E-71 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APECO1_RS20680 f45d5431778b9bf4e8d78e7140adb6b3 319 Gene3D G3DSA:3.20.20.370 12 248 5.2E-109 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS20680 f45d5431778b9bf4e8d78e7140adb6b3 319 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 2.9E-74 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ APECO1_RS20680 f45d5431778b9bf4e8d78e7140adb6b3 319 PANTHER PTHR30105 4 255 1.4E-105 T 22-04-2016 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.5E-75 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.7E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.7E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.7E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.7E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.7E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 PANTHER PTHR23359 1 213 2.5E-115 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.776 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.5E-15 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 SUPERFAMILY SSF52540 1 212 1.98E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 Pfam PF00406 Adenylate kinase 5 186 1.7E-60 T 22-04-2016 APECO1_RS02410 c065a4573bea92397e410c4888fa7b83 214 Gene3D G3DSA:3.40.50.300 1 212 2.8E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14400 8672177c65f8d64f7bcfe8fd85c07a96 332 PANTHER PTHR32196:SF21 5 332 4.1E-111 T 22-04-2016 APECO1_RS14400 8672177c65f8d64f7bcfe8fd85c07a96 332 PANTHER PTHR32196 5 332 4.1E-111 T 22-04-2016 APECO1_RS14400 8672177c65f8d64f7bcfe8fd85c07a96 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 317 2.1E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS13750 4c230c6514cdc384596566f76e37b4e9 97 PANTHER PTHR33941 1 89 1.4E-42 T 22-04-2016 APECO1_RS13750 4c230c6514cdc384596566f76e37b4e9 97 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 20 39 - T 22-04-2016 IPR020808 Bacterial microcompartments protein, conserved site APECO1_RS13750 4c230c6514cdc384596566f76e37b4e9 97 Pfam PF00936 BMC domain 3 78 8.2E-28 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13750 4c230c6514cdc384596566f76e37b4e9 97 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 7.0E-19 T 22-04-2016 APECO1_RS13750 4c230c6514cdc384596566f76e37b4e9 97 SMART SM00877 2 78 9.9E-36 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13750 4c230c6514cdc384596566f76e37b4e9 97 SUPERFAMILY SSF143414 1 89 2.35E-31 T 22-04-2016 APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 PANTHER PTHR34216 462 647 0.0 T 22-04-2016 APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 PANTHER PTHR34216 11 308 0.0 T 22-04-2016 APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 SUPERFAMILY SSF88713 224 348 9.45E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 SUPERFAMILY SSF88713 65 196 9.45E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 318 645 3.0E-142 T 22-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 Gene3D G3DSA:3.20.20.370 74 347 1.3E-25 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 PANTHER PTHR34216:SF2 462 647 0.0 T 22-04-2016 APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 PANTHER PTHR34216:SF2 11 308 0.0 T 22-04-2016 APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 49 665 8.8E-270 T 22-04-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- APECO1_RS05175 89b02b1c0bb3bff347f780117ccafcdd 672 Pfam PF01522 Polysaccharide deacetylase 102 270 1.3E-30 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APECO1_RS05330 153a143fd6ce37de98555a376599e43c 191 PANTHER PTHR34406 1 190 1.0E-66 T 22-04-2016 APECO1_RS05330 153a143fd6ce37de98555a376599e43c 191 Pfam PF04264 YceI-like domain 25 186 9.9E-44 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APECO1_RS05330 153a143fd6ce37de98555a376599e43c 191 Hamap MF_00780 Protein YceI [yceI]. 1 191 49.19 T 22-04-2016 IPR023480 Uncharacterised protein family UPF0312/YceI APECO1_RS05330 153a143fd6ce37de98555a376599e43c 191 SMART SM00867 24 188 7.0E-75 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APECO1_RS05330 153a143fd6ce37de98555a376599e43c 191 SUPERFAMILY SSF101874 22 190 4.97E-58 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APECO1_RS05330 153a143fd6ce37de98555a376599e43c 191 PANTHER PTHR34406:SF1 1 190 1.0E-66 T 22-04-2016 APECO1_RS05330 153a143fd6ce37de98555a376599e43c 191 Gene3D G3DSA:2.40.128.110 22 190 4.7E-63 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APECO1_RS15480 be835559c4e075f120dce19bf8d1217f 180 PANTHER PTHR10849 1 150 3.6E-76 T 22-04-2016 APECO1_RS15480 be835559c4e075f120dce19bf8d1217f 180 PANTHER PTHR10849:SF11 1 150 3.6E-76 T 22-04-2016 APECO1_RS15480 be835559c4e075f120dce19bf8d1217f 180 Gene3D G3DSA:3.30.70.20 3 93 6.7E-21 T 22-04-2016 APECO1_RS15480 be835559c4e075f120dce19bf8d1217f 180 SUPERFAMILY SSF54862 18 116 5.02E-23 T 22-04-2016 APECO1_RS15480 be835559c4e075f120dce19bf8d1217f 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS15480 be835559c4e075f120dce19bf8d1217f 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS15480 be835559c4e075f120dce19bf8d1217f 180 Pfam PF12838 4Fe-4S dicluster domain 39 89 2.8E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS11530 810c302d95972982411b54e49699d4c1 110 SUPERFAMILY SSF160113 1 57 9.94E-20 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 APECO1_RS11530 810c302d95972982411b54e49699d4c1 110 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 9.1E-21 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 APECO1_RS11530 810c302d95972982411b54e49699d4c1 110 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 4.4E-22 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 APECO1_RS11530 810c302d95972982411b54e49699d4c1 110 PANTHER PTHR40606 2 110 8.7E-72 T 22-04-2016 APECO1_RS11530 810c302d95972982411b54e49699d4c1 110 PANTHER PTHR40606:SF1 2 110 8.7E-72 T 22-04-2016 APECO1_RS11530 810c302d95972982411b54e49699d4c1 110 Gene3D G3DSA:3.30.160.160 55 100 3.5E-21 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 APECO1_RS11530 810c302d95972982411b54e49699d4c1 110 Gene3D G3DSA:3.30.160.160 3 49 5.0E-23 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 APECO1_RS11530 810c302d95972982411b54e49699d4c1 110 SUPERFAMILY SSF160113 61 108 7.2E-16 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 APECO1_RS04065 eaee166611437e9b43d38eca6c5cf26c 371 Pfam PF07995 Glucose / Sorbosone dehydrogenase 34 366 9.1E-130 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 APECO1_RS04065 eaee166611437e9b43d38eca6c5cf26c 371 PANTHER PTHR19328 17 369 1.7E-90 T 22-04-2016 APECO1_RS04065 eaee166611437e9b43d38eca6c5cf26c 371 Gene3D G3DSA:2.120.10.30 11 369 1.9E-104 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APECO1_RS04065 eaee166611437e9b43d38eca6c5cf26c 371 SUPERFAMILY SSF50952 20 370 2.75E-41 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APECO1_RS12160 f49f9ea811d89e701c0cc9d9a464363a 188 Gene3D G3DSA:3.90.1720.10 68 186 7.4E-46 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS12160 f49f9ea811d89e701c0cc9d9a464363a 188 Pfam PF00877 NlpC/P60 family 79 183 2.0E-34 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS12160 f49f9ea811d89e701c0cc9d9a464363a 188 PANTHER PTHR21666 7 187 5.3E-91 T 22-04-2016 APECO1_RS12160 f49f9ea811d89e701c0cc9d9a464363a 188 PANTHER PTHR21666:SF210 7 187 5.3E-91 T 22-04-2016 APECO1_RS12160 f49f9ea811d89e701c0cc9d9a464363a 188 SUPERFAMILY SSF54001 67 185 1.86E-41 T 22-04-2016 APECO1_RS01165 4621cf7c275e92349a225695052fac49 247 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 54 244 2.2E-82 T 22-04-2016 IPR017738 Type VI secretion system-associated, VCA0118 APECO1_RS01165 4621cf7c275e92349a225695052fac49 247 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 57 244 1.8E-53 T 22-04-2016 IPR017738 Type VI secretion system-associated, VCA0118 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 266 3.1E-43 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 SUPERFAMILY SSF81336 95 265 7.32E-50 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 271 16.155 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 PANTHER PTHR11410:SF7 1 122 3.9E-113 T 22-04-2016 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 PANTHER PTHR11410:SF7 138 271 3.9E-113 T 22-04-2016 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 PANTHER PTHR11410 1 122 3.9E-113 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 PANTHER PTHR11410 138 271 3.9E-113 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 Pfam PF00119 ATP synthase A chain 46 265 7.1E-56 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 PRINTS PR00123 ATP synthase A subunit signature 251 266 3.2E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 PRINTS PR00123 ATP synthase A subunit signature 203 225 3.2E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 PRINTS PR00123 ATP synthase A subunit signature 104 120 3.2E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS21330 526f66682c83db01225b83db17fb2c82 271 Gene3D G3DSA:1.20.120.220 96 271 9.9E-59 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APECO1_RS08880 77fcd277b707ec96f47259ebe048ad9b 271 Gene3D G3DSA:3.90.1720.10 133 266 3.6E-47 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS08880 77fcd277b707ec96f47259ebe048ad9b 271 PANTHER PTHR21666 144 265 1.4E-43 T 22-04-2016 APECO1_RS08880 77fcd277b707ec96f47259ebe048ad9b 271 SUPERFAMILY SSF54001 133 265 1.13E-41 T 22-04-2016 APECO1_RS08880 77fcd277b707ec96f47259ebe048ad9b 271 Pfam PF00877 NlpC/P60 family 153 263 7.0E-33 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS03650 510c3cdc082062ee1c6b75957d0917cd 346 PIRSF PIRSF005096 2 346 1.9E-128 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 APECO1_RS03650 510c3cdc082062ee1c6b75957d0917cd 346 PANTHER PTHR10091 8 346 2.7E-144 T 22-04-2016 APECO1_RS03650 510c3cdc082062ee1c6b75957d0917cd 346 Gene3D G3DSA:2.70.98.10 9 344 1.3E-116 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APECO1_RS03650 510c3cdc082062ee1c6b75957d0917cd 346 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 171 180 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 APECO1_RS03650 510c3cdc082062ee1c6b75957d0917cd 346 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 343 1.1E-149 T 22-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 APECO1_RS03650 510c3cdc082062ee1c6b75957d0917cd 346 SUPERFAMILY SSF74650 5 343 2.57E-107 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APECO1_RS03650 510c3cdc082062ee1c6b75957d0917cd 346 Pfam PF01263 Aldose 1-epimerase 17 342 7.8E-91 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APECO1_RS03650 510c3cdc082062ee1c6b75957d0917cd 346 PANTHER PTHR10091:SF0 8 346 2.7E-144 T 22-04-2016 APECO1_RS17660 b18f416701102b3c46e36034fc406489 209 PANTHER PTHR11839 1 208 1.0E-129 T 22-04-2016 APECO1_RS17660 b18f416701102b3c46e36034fc406489 209 Gene3D G3DSA:3.90.79.10 11 208 1.1E-56 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS17660 b18f416701102b3c46e36034fc406489 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 2.6E-85 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 APECO1_RS17660 b18f416701102b3c46e36034fc406489 209 SUPERFAMILY SSF55811 6 208 1.14E-50 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APECO1_RS17660 b18f416701102b3c46e36034fc406489 209 Pfam PF00293 NUDIX domain 59 179 1.4E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APECO1_RS17660 b18f416701102b3c46e36034fc406489 209 PANTHER PTHR11839:SF5 1 208 1.0E-129 T 22-04-2016 APECO1_RS17660 b18f416701102b3c46e36034fc406489 209 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APECO1_RS13060 f2d46605b6b7a209e9bb4ceca46c24fa 149 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 29 144 3.0E-11 T 22-04-2016 IPR020353 Toxin YafO APECO1_RS13060 f2d46605b6b7a209e9bb4ceca46c24fa 149 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 36 145 3.6E-23 T 22-04-2016 IPR020353 Toxin YafO APECO1_RS07900 42952d8e9f391db6599ea5fe34a06fec 57 ProDom PD052090 YDCA PRECURSOR SIGNAL ECS2024 1 57 4.0E-26 T 22-04-2016 APECO1_RS16885 47b4a9135e7714355d1e39c93b2144b4 104 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 12 96 5.2E-37 T 22-04-2016 IPR004356 Adhesin operon regulatory protein GO:0006355 APECO1_RS16885 47b4a9135e7714355d1e39c93b2144b4 104 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 33 48 1.1E-25 T 22-04-2016 IPR004356 Adhesin operon regulatory protein GO:0006355 APECO1_RS16885 47b4a9135e7714355d1e39c93b2144b4 104 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 53 69 1.1E-25 T 22-04-2016 IPR004356 Adhesin operon regulatory protein GO:0006355 APECO1_RS16885 47b4a9135e7714355d1e39c93b2144b4 104 PRINTS PR01554 Escherichia coli P pili regulatory PapB protein signature 71 86 1.1E-25 T 22-04-2016 IPR004356 Adhesin operon regulatory protein GO:0006355 APECO1_RS14745 fd2eff2e427e301931fc785ccd9524cf 172 Pfam PF13689 Domain of unknown function (DUF4154) 34 167 5.2E-29 T 22-04-2016 IPR025293 Protein of unknown function DUF4154 APECO1_RS20750 91322ecb44670fac8daafb2f1ecbe06b 374 PANTHER PTHR12526:SF220 1 352 2.1E-138 T 22-04-2016 APECO1_RS20750 91322ecb44670fac8daafb2f1ecbe06b 374 PANTHER PTHR12526 1 352 2.1E-138 T 22-04-2016 APECO1_RS20750 91322ecb44670fac8daafb2f1ecbe06b 374 Gene3D G3DSA:3.40.50.2000 154 349 6.1E-21 T 22-04-2016 APECO1_RS20750 91322ecb44670fac8daafb2f1ecbe06b 374 Pfam PF00534 Glycosyl transferases group 1 183 350 2.2E-37 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APECO1_RS20750 91322ecb44670fac8daafb2f1ecbe06b 374 SUPERFAMILY SSF53756 3 354 2.08E-62 T 22-04-2016 APECO1_RS20750 91322ecb44670fac8daafb2f1ecbe06b 374 Pfam PF13439 Glycosyltransferase Family 4 13 173 3.1E-8 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 PANTHER PTHR30203 5 477 1.2E-225 T 22-04-2016 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 PANTHER PTHR30203:SF6 5 477 1.2E-225 T 22-04-2016 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 475 1.9E-81 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 Gene3D G3DSA:1.20.1600.10 362 475 1.2E-65 T 22-04-2016 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 Gene3D G3DSA:1.20.1600.10 53 93 1.2E-65 T 22-04-2016 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 Gene3D G3DSA:1.20.1600.10 154 324 1.2E-65 T 22-04-2016 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 SUPERFAMILY SSF56954 7 476 6.15E-75 T 22-04-2016 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 Gene3D G3DSA:2.20.200.10 104 153 1.1E-15 T 22-04-2016 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 Gene3D G3DSA:2.20.200.10 325 360 1.1E-15 T 22-04-2016 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 Pfam PF02321 Outer membrane efflux protein 69 266 3.6E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS11960 ac4675b5b547cce9a0dfe33b4e72b497 478 Pfam PF02321 Outer membrane efflux protein 293 473 4.2E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS24545 07501cd2765af74abefc4e865dae9ce9 577 Pfam PF07244 Surface antigen variable number repeat 189 252 2.6E-8 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APECO1_RS24545 07501cd2765af74abefc4e865dae9ce9 577 Gene3D G3DSA:2.40.160.50 306 574 1.1E-21 T 22-04-2016 APECO1_RS24545 07501cd2765af74abefc4e865dae9ce9 577 Pfam PF01103 Surface antigen 282 574 3.7E-31 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APECO1_RS24545 07501cd2765af74abefc4e865dae9ce9 577 PANTHER PTHR12815 7 577 1.5E-293 T 22-04-2016 APECO1_RS24545 07501cd2765af74abefc4e865dae9ce9 577 PANTHER PTHR12815:SF12 7 577 1.5E-293 T 22-04-2016 APECO1_RS13280 388f38bca25c123d580387b7c5dc622a 201 Pfam PF04404 ERF superfamily 5 142 2.4E-36 T 22-04-2016 IPR007499 Essential recombination function protein APECO1_RS06730 42519aa5c2770582c43c2f1da2a2bb58 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 45 67 5.5E-14 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS06730 42519aa5c2770582c43c2f1da2a2bb58 70 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 43 5.5E-14 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS06730 42519aa5c2770582c43c2f1da2a2bb58 70 Pfam PF01848 Hok/gef family 25 66 3.9E-19 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS06730 42519aa5c2770582c43c2f1da2a2bb58 70 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 30 49 - T 22-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 APECO1_RS06730 42519aa5c2770582c43c2f1da2a2bb58 70 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 31 67 3.0E-5 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APECO1_RS15080 5a38e54295740e7a88998156022717e8 66 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 13 64 6.2E-10 T 22-04-2016 IPR031856 Putative bacterial antitoxin YdaS APECO1_RS15080 5a38e54295740e7a88998156022717e8 66 Gene3D G3DSA:1.10.260.40 13 65 1.9E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS19090 7bb63684ebdd53a1095c13dfe9ed4579 271 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 194 220 - T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 APECO1_RS19090 7bb63684ebdd53a1095c13dfe9ed4579 271 SUPERFAMILY SSF50156 167 254 1.16E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS19090 7bb63684ebdd53a1095c13dfe9ed4579 271 Pfam PF11356 Type II secretion system protein C 76 152 6.9E-8 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal APECO1_RS19090 7bb63684ebdd53a1095c13dfe9ed4579 271 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 17 256 8.0E-87 T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 APECO1_RS19090 7bb63684ebdd53a1095c13dfe9ed4579 271 Gene3D G3DSA:2.30.42.10 205 260 4.5E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APECO1_RS04535 884445a6e40afd9820dddb93e9cdd35f 211 Pfam PF04717 Type VI secretion system, phage-baseplate injector 8 119 5.2E-48 T 22-04-2016 IPR006531 Gp5 N-terminal APECO1_RS04535 884445a6e40afd9820dddb93e9cdd35f 211 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 10 209 7.0E-75 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 APECO1_RS24145 a1d9c6f0eeac3596a136cc006aff53d4 105 SUPERFAMILY SSF103481 5 103 2.48E-20 T 22-04-2016 APECO1_RS24145 a1d9c6f0eeac3596a136cc006aff53d4 105 PANTHER PTHR30561:SF0 1 105 2.9E-54 T 22-04-2016 APECO1_RS24145 a1d9c6f0eeac3596a136cc006aff53d4 105 PANTHER PTHR30561 1 105 2.9E-54 T 22-04-2016 APECO1_RS24145 a1d9c6f0eeac3596a136cc006aff53d4 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 5.8E-33 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APECO1_RS18400 17762f76e0f81ac376f47293595200a3 84 PIRSF PIRSF003113 1 83 5.6E-21 T 22-04-2016 IPR002634 BolA protein APECO1_RS18400 17762f76e0f81ac376f47293595200a3 84 SUPERFAMILY SSF82657 2 82 3.01E-28 T 22-04-2016 IPR002634 BolA protein APECO1_RS18400 17762f76e0f81ac376f47293595200a3 84 Pfam PF01722 BolA-like protein 17 74 8.9E-14 T 22-04-2016 IPR002634 BolA protein APECO1_RS18400 17762f76e0f81ac376f47293595200a3 84 PANTHER PTHR12735 1 84 4.6E-32 T 22-04-2016 APECO1_RS18400 17762f76e0f81ac376f47293595200a3 84 PANTHER PTHR12735:SF24 1 84 4.6E-32 T 22-04-2016 APECO1_RS18400 17762f76e0f81ac376f47293595200a3 84 Gene3D G3DSA:3.30.300.90 1 80 3.1E-27 T 22-04-2016 IPR002634 BolA protein APECO1_RS23445 ffce120f5e4d1ca19b27f43da5c8b252 144 PANTHER PTHR23091:SF230 1 134 1.3E-97 T 22-04-2016 APECO1_RS23445 ffce120f5e4d1ca19b27f43da5c8b252 144 Pfam PF00583 Acetyltransferase (GNAT) family 54 134 1.5E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS23445 ffce120f5e4d1ca19b27f43da5c8b252 144 SUPERFAMILY SSF55729 6 137 3.88E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS23445 ffce120f5e4d1ca19b27f43da5c8b252 144 PANTHER PTHR23091 1 134 1.3E-97 T 22-04-2016 APECO1_RS23445 ffce120f5e4d1ca19b27f43da5c8b252 144 Gene3D G3DSA:3.40.630.30 3 143 6.7E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS09810 70abb6ea92051a8e79c91f1ed37a5ed6 165 Pfam PF13185 GAF domain 34 151 2.9E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS09810 70abb6ea92051a8e79c91f1ed37a5ed6 165 SUPERFAMILY SSF55781 2 148 4.58E-42 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS09810 70abb6ea92051a8e79c91f1ed37a5ed6 165 Gene3D G3DSA:3.30.450.40 2 151 1.2E-50 T 22-04-2016 IPR029016 GAF domain-like APECO1_RS09810 70abb6ea92051a8e79c91f1ed37a5ed6 165 SMART SM00065 9 161 4.5E-14 T 22-04-2016 IPR003018 GAF domain GO:0005515 APECO1_RS09810 70abb6ea92051a8e79c91f1ed37a5ed6 165 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 90 107 - T 22-04-2016 IPR000614 Free Met sulfoxide reductase conserved site APECO1_RS09810 70abb6ea92051a8e79c91f1ed37a5ed6 165 PANTHER PTHR21021 1 151 6.0E-57 T 22-04-2016 APECO1_RS07345 c8d0947febcc851a09be3d372a4c4661 306 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 159 2.6E-9 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 APECO1_RS07345 c8d0947febcc851a09be3d372a4c4661 306 PANTHER PTHR17630 1 306 4.0E-97 T 22-04-2016 APECO1_RS07345 c8d0947febcc851a09be3d372a4c4661 306 Gene3D G3DSA:3.40.50.1820 5 306 1.7E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07345 c8d0947febcc851a09be3d372a4c4661 306 SUPERFAMILY SSF53474 9 143 1.26E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07345 c8d0947febcc851a09be3d372a4c4661 306 SUPERFAMILY SSF53474 194 306 1.26E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS07345 c8d0947febcc851a09be3d372a4c4661 306 PANTHER PTHR17630:SF49 1 306 4.0E-97 T 22-04-2016 APECO1_RS22540 41c745e1144737d3a54930399d749fd8 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 1.9E-21 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS22540 41c745e1144737d3a54930399d749fd8 106 Gene3D G3DSA:3.40.50.2300 2 101 1.3E-41 T 22-04-2016 APECO1_RS22540 41c745e1144737d3a54930399d749fd8 106 SUPERFAMILY SSF52794 3 101 1.71E-35 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS22540 41c745e1144737d3a54930399d749fd8 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 3.3E-41 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APECO1_RS22540 41c745e1144737d3a54930399d749fd8 106 PANTHER PTHR30505 1 102 6.7E-42 T 22-04-2016 APECO1_RS06085 7e68f8935af7f316d58c5804626d3dc6 285 Pfam PF00950 ABC 3 transport family 9 264 3.1E-82 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APECO1_RS06085 7e68f8935af7f316d58c5804626d3dc6 285 SUPERFAMILY SSF81345 4 260 5.62E-39 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS06085 7e68f8935af7f316d58c5804626d3dc6 285 PANTHER PTHR30477 1 284 2.2E-133 T 22-04-2016 APECO1_RS06085 7e68f8935af7f316d58c5804626d3dc6 285 PANTHER PTHR30477:SF13 1 284 2.2E-133 T 22-04-2016 APECO1_RS06085 7e68f8935af7f316d58c5804626d3dc6 285 Gene3D G3DSA:1.10.3470.10 62 242 4.2E-11 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS05805 99b4e2394a36b5685521619a4bd2fd20 54 ProSitePatterns PS00553 Lambdoid phages regulatory protein CIII signature. 16 37 - T 22-04-2016 IPR013056 Bacteriophage lambda, CIII, regulatory protein APECO1_RS05805 99b4e2394a36b5685521619a4bd2fd20 54 PRINTS PR00936 Lambda phage regulatory protein CIII signature 26 39 1.5E-10 T 22-04-2016 IPR013056 Bacteriophage lambda, CIII, regulatory protein APECO1_RS05805 99b4e2394a36b5685521619a4bd2fd20 54 PRINTS PR00936 Lambda phage regulatory protein CIII signature 16 26 1.5E-10 T 22-04-2016 IPR013056 Bacteriophage lambda, CIII, regulatory protein APECO1_RS05805 99b4e2394a36b5685521619a4bd2fd20 54 Pfam PF02061 Lambda Phage CIII 2 43 1.3E-30 T 22-04-2016 IPR013056 Bacteriophage lambda, CIII, regulatory protein APECO1_RS05805 99b4e2394a36b5685521619a4bd2fd20 54 ProDom PD026804 CIII REGULATORY TRANSCRIPTION LAMBDA C3 ACTIVATOR REGULATION GP GP52 1 27 3.0E-9 T 22-04-2016 APECO1_RS02525 2e00cf992cec98e5fd3ecf86325ab828 225 SUPERFAMILY SSF52540 5 211 6.29E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02525 2e00cf992cec98e5fd3ecf86325ab828 225 SMART SM00382 32 213 6.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS02525 2e00cf992cec98e5fd3ecf86325ab828 225 Pfam PF00005 ABC transporter 23 166 2.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS02525 2e00cf992cec98e5fd3ecf86325ab828 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS02525 2e00cf992cec98e5fd3ecf86325ab828 225 PANTHER PTHR24220 9 219 2.0E-100 T 22-04-2016 APECO1_RS02525 2e00cf992cec98e5fd3ecf86325ab828 225 PANTHER PTHR24220:SF410 9 219 2.0E-100 T 22-04-2016 APECO1_RS02525 2e00cf992cec98e5fd3ecf86325ab828 225 Gene3D G3DSA:3.40.50.300 5 219 3.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS01930 7f96e8cdcba5b70264df8173cbad350b 102 Pfam PF10954 Protein of unknown function (DUF2755) 1 101 9.2E-50 T 22-04-2016 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 APECO1_RS01930 7f96e8cdcba5b70264df8173cbad350b 102 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 102 2.0E-54 T 22-04-2016 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 APECO1_RS17950 8e744d7116c358fb163f8d87ca48cd33 183 PIRSF PIRSF011443 1 182 5.0E-70 T 22-04-2016 IPR026267 Inner membrane protein YgjV APECO1_RS17950 8e744d7116c358fb163f8d87ca48cd33 183 Pfam PF10688 Bacterial inner membrane protein 5 163 3.8E-57 T 22-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV APECO1_RS09595 e6bbc7ca10437645ad8c18addc03c884 115 PANTHER PTHR36849 1 113 1.6E-57 T 22-04-2016 APECO1_RS09595 e6bbc7ca10437645ad8c18addc03c884 115 PANTHER PTHR36849:SF1 1 113 1.6E-57 T 22-04-2016 APECO1_RS09595 e6bbc7ca10437645ad8c18addc03c884 115 Pfam PF04343 Protein of unknown function, DUF488 5 112 1.0E-31 T 22-04-2016 IPR007438 Protein of unknown function DUF488 APECO1_RS17345 792d2388b62f10ff83a5c7a67e49194a 449 Pfam PF01943 Polysaccharide biosynthesis protein 19 280 1.2E-9 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APECO1_RS24900 a6c332460492e7f21d8f30f0c306bf89 127 Pfam PF04965 Gene 25-like lysozyme 20 106 8.2E-11 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD APECO1_RS24900 a6c332460492e7f21d8f30f0c306bf89 127 SUPERFAMILY SSF160719 18 112 2.09E-7 T 22-04-2016 APECO1_RS24900 a6c332460492e7f21d8f30f0c306bf89 127 Hamap MF_02010 Anti-adapter protein IraD [iraD]. 1 122 43.61 T 22-04-2016 IPR023776 Anti-adapter protein, IraD GO:0006974|GO:0043856 APECO1_RS05495 211eeaac246f953b67ca2ccd0477fe3b 57 Pfam PF01783 Ribosomal L32p protein family 2 57 1.9E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APECO1_RS05495 211eeaac246f953b67ca2ccd0477fe3b 57 SUPERFAMILY SSF57829 2 55 1.53E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APECO1_RS05495 211eeaac246f953b67ca2ccd0477fe3b 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.2E-18 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APECO1_RS05495 211eeaac246f953b67ca2ccd0477fe3b 57 PANTHER PTHR35534 1 57 5.6E-28 T 22-04-2016 APECO1_RS05495 211eeaac246f953b67ca2ccd0477fe3b 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 16.352 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APECO1_RS11045 9f22175e901d6c17897a03ee2bafc95b 189 Pfam PF11726 Protein of unknown function (DUF3296) 12 187 1.9E-54 T 22-04-2016 IPR021723 Inovirus Gp2 APECO1_RS13055 08e90354b6ddd0de05043c8b878a2703 178 Gene3D G3DSA:3.90.226.10 5 166 2.7E-15 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS13055 08e90354b6ddd0de05043c8b878a2703 178 SUPERFAMILY SSF52096 3 166 3.98E-25 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS13055 08e90354b6ddd0de05043c8b878a2703 178 Pfam PF00574 Clp protease 23 165 2.5E-11 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APECO1_RS11270 01dc05a694fbf10399eb57385247d798 326 SUPERFAMILY SSF160355 54 293 8.24E-71 T 22-04-2016 APECO1_RS11270 01dc05a694fbf10399eb57385247d798 326 Gene3D G3DSA:3.30.1890.10 242 295 5.4E-15 T 22-04-2016 APECO1_RS11270 01dc05a694fbf10399eb57385247d798 326 Gene3D G3DSA:3.30.1890.10 52 218 1.2E-45 T 22-04-2016 APECO1_RS11270 01dc05a694fbf10399eb57385247d798 326 Pfam PF02706 Chain length determinant protein 16 154 7.9E-19 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APECO1_RS02550 c5d4c8f8e0f93888ff700e56eba3bd38 228 SUPERFAMILY SSF52540 6 226 1.93E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02550 c5d4c8f8e0f93888ff700e56eba3bd38 228 PANTHER PTHR24220:SF509 8 227 1.9E-117 T 22-04-2016 APECO1_RS02550 c5d4c8f8e0f93888ff700e56eba3bd38 228 SMART SM00382 35 225 4.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS02550 c5d4c8f8e0f93888ff700e56eba3bd38 228 Gene3D G3DSA:3.40.50.300 5 227 1.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS02550 c5d4c8f8e0f93888ff700e56eba3bd38 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS02550 c5d4c8f8e0f93888ff700e56eba3bd38 228 PANTHER PTHR24220 8 227 1.9E-117 T 22-04-2016 APECO1_RS02550 c5d4c8f8e0f93888ff700e56eba3bd38 228 Pfam PF00005 ABC transporter 27 174 1.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 Gene3D G3DSA:3.40.190.10 31 152 2.5E-24 T 22-04-2016 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 Gene3D G3DSA:3.40.190.10 153 322 5.2E-59 T 22-04-2016 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 SUPERFAMILY SSF53850 29 395 1.13E-99 T 22-04-2016 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PANTHER PTHR30061 1 396 1.0E-141 T 22-04-2016 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PANTHER PTHR30061:SF21 1 396 1.0E-141 T 22-04-2016 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 233 252 9.4E-101 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 357 376 9.4E-101 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 151 170 9.4E-101 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 130 149 9.4E-101 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 36 54 9.4E-101 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 70 88 9.4E-101 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 171 190 9.4E-101 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 PRINTS PR00181 Maltose binding protein signature 299 320 9.4E-101 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APECO1_RS23030 9629a4275fde1abf3ebd5c44586ad8ab 396 Pfam PF13416 Bacterial extracellular solute-binding protein 50 344 9.4E-43 T 22-04-2016 APECO1_RS24195 44dd97e62bb9f56d0ad15dce26288de8 104 ProDom PD069399 MEMBRANE INNER YJEO SIMILAR INTEGRAL ORF22 ESCHERICHIA TRANSMEMBRANE COLI 12 103 2.0E-38 T 22-04-2016 IPR022553 Protein of unknown function DUF2645 APECO1_RS24195 44dd97e62bb9f56d0ad15dce26288de8 104 Pfam PF10840 Protein of unknown function (DUF2645) 7 103 3.2E-37 T 22-04-2016 IPR022553 Protein of unknown function DUF2645 APECO1_RS07040 00ed2acece391bc2d4fba1e81e860271 83 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 1.2E-42 T 22-04-2016 IPR019633 Protein of unknown function DUF2498 APECO1_RS25000 b256542ce806edd53f190b0b5bcdbf1d 114 SUPERFAMILY SSF56399 11 113 2.59E-28 T 22-04-2016 APECO1_RS25000 b256542ce806edd53f190b0b5bcdbf1d 114 PANTHER PTHR12684:SF2 1 113 9.9E-27 T 22-04-2016 APECO1_RS25000 b256542ce806edd53f190b0b5bcdbf1d 114 PANTHER PTHR12684 1 113 9.9E-27 T 22-04-2016 APECO1_RS25000 b256542ce806edd53f190b0b5bcdbf1d 114 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 10 113 4.4E-20 T 22-04-2016 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 APECO1_RS11340 e9169fbf3c02bf490218ee836ab0b9ae 464 TIGRFAM TIGR04004 WcaM: colanic acid biosynthesis protein WcaM 3 462 5.2E-293 T 22-04-2016 IPR023882 Colanic acid biosynthesis WcaM UniPathway: UPA00936 APECO1_RS11340 e9169fbf3c02bf490218ee836ab0b9ae 464 SUPERFAMILY SSF51126 44 350 8.17E-20 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APECO1_RS16915 7bea6abca350306e82794b4bd8248e2f 188 Pfam PF11726 Protein of unknown function (DUF3296) 15 164 5.8E-11 T 22-04-2016 IPR021723 Inovirus Gp2 APECO1_RS02915 95856758bc910f75b955633a0b386897 65 PANTHER PTHR38453 1 65 1.5E-43 T 22-04-2016 APECO1_RS02915 95856758bc910f75b955633a0b386897 65 PANTHER PTHR38453:SF2 1 65 1.5E-43 T 22-04-2016 APECO1_RS02915 95856758bc910f75b955633a0b386897 65 Pfam PF04328 Protein of unknown function (DUF466) 5 65 8.7E-31 T 22-04-2016 IPR007423 Protein of unknown function DUF466 APECO1_RS11705 a6c753f496700a28ab47c3e25595f191 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 129 1.4E-27 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APECO1_RS11705 a6c753f496700a28ab47c3e25595f191 299 SUPERFAMILY SSF111331 8 297 6.98E-68 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APECO1_RS11705 a6c753f496700a28ab47c3e25595f191 299 SMART SM00046 6 132 1.7E-37 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APECO1_RS11705 a6c753f496700a28ab47c3e25595f191 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 9.6E-124 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase APECO1_RS11705 a6c753f496700a28ab47c3e25595f191 299 PANTHER PTHR12358 22 299 2.9E-62 T 22-04-2016 APECO1_RS11705 a6c753f496700a28ab47c3e25595f191 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 4 299 48.605 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 APECO1_RS11705 a6c753f496700a28ab47c3e25595f191 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 298 4.4E-142 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 APECO1_RS18825 364297f520dae562913c6bad1d7930a8 252 SMART SM00382 37 224 1.8E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APECO1_RS18825 364297f520dae562913c6bad1d7930a8 252 PIRSF PIRSF039085 9 252 2.2E-107 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APECO1_RS18825 364297f520dae562913c6bad1d7930a8 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APECO1_RS18825 364297f520dae562913c6bad1d7930a8 252 PANTHER PTHR24220 14 251 1.5E-172 T 22-04-2016 APECO1_RS18825 364297f520dae562913c6bad1d7930a8 252 Gene3D G3DSA:3.40.50.300 11 248 8.6E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18825 364297f520dae562913c6bad1d7930a8 252 SUPERFAMILY SSF52540 12 246 9.41E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS18825 364297f520dae562913c6bad1d7930a8 252 PANTHER PTHR24220:SF474 14 251 1.5E-172 T 22-04-2016 APECO1_RS18825 364297f520dae562913c6bad1d7930a8 252 Pfam PF00005 ABC transporter 28 176 8.3E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APECO1_RS02335 12c7241ea3ff19fca3246f734db77c39 72 Gene3D G3DSA:1.20.1280.40 6 72 1.4E-37 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APECO1_RS02335 12c7241ea3ff19fca3246f734db77c39 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 1.4E-33 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APECO1_RS02335 12c7241ea3ff19fca3246f734db77c39 72 SUPERFAMILY SSF68989 2 72 9.94E-32 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APECO1_RS24840 d20de0a33fff7c945bf8dc22f259d995 165 PANTHER PTHR33420:SF1 16 165 2.6E-49 T 22-04-2016 APECO1_RS24840 d20de0a33fff7c945bf8dc22f259d995 165 SUPERFAMILY SSF49401 17 165 6.96E-35 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS24840 d20de0a33fff7c945bf8dc22f259d995 165 PANTHER PTHR33420 16 165 2.6E-49 T 22-04-2016 APECO1_RS24840 d20de0a33fff7c945bf8dc22f259d995 165 Pfam PF00419 Fimbrial protein 19 165 3.4E-21 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS24840 d20de0a33fff7c945bf8dc22f259d995 165 Gene3D G3DSA:2.60.40.1090 16 165 3.5E-38 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS05245 c42e2221aede9f664d1a4323cf99866b 151 PANTHER PTHR34771 1 151 4.3E-41 T 22-04-2016 APECO1_RS05245 c42e2221aede9f664d1a4323cf99866b 151 Pfam PF07012 Curlin associated repeat 75 106 4.3E-10 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 APECO1_RS05245 c42e2221aede9f664d1a4323cf99866b 151 Pfam PF07012 Curlin associated repeat 53 86 4.6E-7 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 APECO1_RS05245 c42e2221aede9f664d1a4323cf99866b 151 Pfam PF07012 Curlin associated repeat 97 130 3.8E-9 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 APECO1_RS05020 0871dc8daa57d8e4caff10e07f12dd69 357 PANTHER PTHR30224 1 357 1.0E-116 T 22-04-2016 APECO1_RS05020 0871dc8daa57d8e4caff10e07f12dd69 357 Pfam PF12801 4Fe-4S binding domain 201 245 1.8E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS05020 0871dc8daa57d8e4caff10e07f12dd69 357 Pfam PF12801 4Fe-4S binding domain 97 142 1.2E-14 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS05020 0871dc8daa57d8e4caff10e07f12dd69 357 PANTHER PTHR30224:SF4 1 357 1.0E-116 T 22-04-2016 APECO1_RS05020 0871dc8daa57d8e4caff10e07f12dd69 357 Gene3D G3DSA:3.30.70.20 217 301 7.0E-15 T 22-04-2016 APECO1_RS05020 0871dc8daa57d8e4caff10e07f12dd69 357 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 278 289 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS05020 0871dc8daa57d8e4caff10e07f12dd69 357 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 251 262 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS05020 0871dc8daa57d8e4caff10e07f12dd69 357 SUPERFAMILY SSF54862 110 129 9.94E-23 T 22-04-2016 APECO1_RS05020 0871dc8daa57d8e4caff10e07f12dd69 357 SUPERFAMILY SSF54862 172 291 9.94E-23 T 22-04-2016 APECO1_RS20815 e49900bf4f81a44994e8d3283fa4021d 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.5E-138 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 APECO1_RS20815 e49900bf4f81a44994e8d3283fa4021d 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 3.0E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 APECO1_RS20815 e49900bf4f81a44994e8d3283fa4021d 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 2.2E-43 T 22-04-2016 IPR013527 YicC-like, N-terminal APECO1_RS20815 e49900bf4f81a44994e8d3283fa4021d 287 PANTHER PTHR30636 1 287 6.4E-113 T 22-04-2016 APECO1_RS18820 1443e9a220c2a6ca88d9931d08ce00b3 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 156 252 6.2E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APECO1_RS18820 1443e9a220c2a6ca88d9931d08ce00b3 367 SUPERFAMILY SSF161098 154 346 6.02E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18820 1443e9a220c2a6ca88d9931d08ce00b3 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 174 360 2.8E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18820 1443e9a220c2a6ca88d9931d08ce00b3 367 PANTHER PTHR30085:SF3 64 367 1.3E-190 T 22-04-2016 APECO1_RS18820 1443e9a220c2a6ca88d9931d08ce00b3 367 Gene3D G3DSA:1.10.3720.10 153 361 3.0E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS18820 1443e9a220c2a6ca88d9931d08ce00b3 367 PANTHER PTHR30085 64 367 1.3E-190 T 22-04-2016 APECO1_RS18160 dd2615aab5e6a13efd6ef9bd8625cc81 267 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 2 267 7.4E-123 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS18160 dd2615aab5e6a13efd6ef9bd8625cc81 267 PANTHER PTHR32502:SF8 3 267 4.3E-129 T 22-04-2016 APECO1_RS18160 dd2615aab5e6a13efd6ef9bd8625cc81 267 Pfam PF03609 PTS system sorbose-specific iic component 7 238 1.9E-65 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APECO1_RS18160 dd2615aab5e6a13efd6ef9bd8625cc81 267 PANTHER PTHR32502 3 267 4.3E-129 T 22-04-2016 APECO1_RS01265 94ee1cdd83d5147f9705351b340f2221 162 Pfam PF11072 Protein of unknown function (DUF2859) 49 158 3.2E-31 T 22-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 APECO1_RS01265 94ee1cdd83d5147f9705351b340f2221 162 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 59 162 4.6E-36 T 22-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 APECO1_RS23585 c9bdbd775cfc90bd56eea4a167c46b71 216 PIRSF PIRSF020606 1 204 1.3E-82 T 22-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 APECO1_RS23585 c9bdbd775cfc90bd56eea4a167c46b71 216 Pfam PF09997 Predicted membrane protein (DUF2238) 42 182 1.6E-56 T 22-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 APECO1_RS04915 48c49e22055e93dfad21c235114315a1 137 PANTHER PTHR33303 1 133 8.4E-57 T 22-04-2016 APECO1_RS04915 48c49e22055e93dfad21c235114315a1 137 Pfam PF13380 CoA binding domain 15 130 5.4E-39 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS04915 48c49e22055e93dfad21c235114315a1 137 Gene3D G3DSA:3.40.50.720 3 135 5.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS04915 48c49e22055e93dfad21c235114315a1 137 SMART SM00881 9 104 4.1E-26 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APECO1_RS04915 48c49e22055e93dfad21c235114315a1 137 SUPERFAMILY SSF51735 4 135 1.44E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS13155 d4237647b11ad212c0cba44599a9eb78 145 Pfam PF03245 Bacteriophage Rz lysis protein 33 144 9.2E-37 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 APECO1_RS17315 b0db9ea08fb81bcd78231c6a59d2d13e 82 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site APECO1_RS17315 b0db9ea08fb81bcd78231c6a59d2d13e 82 Gene3D G3DSA:1.10.1200.10 3 74 1.5E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS17315 b0db9ea08fb81bcd78231c6a59d2d13e 82 SUPERFAMILY SSF47336 3 79 4.84E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS17315 b0db9ea08fb81bcd78231c6a59d2d13e 82 Pfam PF00550 Phosphopantetheine attachment site 10 74 5.3E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APECO1_RS07110 368016ea4a63bb7caafbfc440cbcc6d0 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 8.0E-39 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 APECO1_RS07110 368016ea4a63bb7caafbfc440cbcc6d0 108 SUPERFAMILY SSF55159 6 104 1.31E-24 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APECO1_RS07110 368016ea4a63bb7caafbfc440cbcc6d0 108 Pfam PF01253 Translation initiation factor SUI1 32 101 7.8E-18 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APECO1_RS07110 368016ea4a63bb7caafbfc440cbcc6d0 108 Gene3D G3DSA:3.30.780.10 28 108 1.1E-34 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APECO1_RS07110 368016ea4a63bb7caafbfc440cbcc6d0 108 PANTHER PTHR12789 1 108 1.7E-40 T 22-04-2016 APECO1_RS07110 368016ea4a63bb7caafbfc440cbcc6d0 108 PIRSF PIRSF037511 1 108 2.8E-36 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 APECO1_RS18635 70e17980165cdae02ba7409d2cef458e 1266 PANTHER PTHR38690 1 1266 0.0 T 22-04-2016 APECO1_RS18635 70e17980165cdae02ba7409d2cef458e 1266 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1262 0.0 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 APECO1_RS18635 70e17980165cdae02ba7409d2cef458e 1266 Pfam PF13502 AsmA-like C-terminal region 1009 1252 2.0E-68 T 22-04-2016 IPR032712 AsmA-like, C-terminal APECO1_RS18635 70e17980165cdae02ba7409d2cef458e 1266 Pfam PF13116 Protein of unknown function 505 789 1.2E-96 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 APECO1_RS10410 6ae14d3cc495dafaede0cc8dc32b1d5a 261 PANTHER PTHR30065 2 261 2.2E-107 T 22-04-2016 APECO1_RS10410 6ae14d3cc495dafaede0cc8dc32b1d5a 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.4E-33 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APECO1_RS10410 6ae14d3cc495dafaede0cc8dc32b1d5a 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.4E-33 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APECO1_RS10410 6ae14d3cc495dafaede0cc8dc32b1d5a 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.4E-33 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APECO1_RS10410 6ae14d3cc495dafaede0cc8dc32b1d5a 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.4E-33 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APECO1_RS10410 6ae14d3cc495dafaede0cc8dc32b1d5a 261 Pfam PF01311 Bacterial export proteins, family 1 14 247 8.3E-69 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APECO1_RS10410 6ae14d3cc495dafaede0cc8dc32b1d5a 261 PANTHER PTHR30065:SF1 2 261 2.2E-107 T 22-04-2016 APECO1_RS10410 6ae14d3cc495dafaede0cc8dc32b1d5a 261 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 2.5E-82 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 APECO1_RS02680 a37ea4961a3df62026def38b3a512fdd 173 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 167 9.2E-34 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase APECO1_RS23915 667f9e09e04215b45ee5db325c3e00cb 122 Gene3D G3DSA:3.10.20.310 67 122 6.0E-10 T 22-04-2016 APECO1_RS23915 667f9e09e04215b45ee5db325c3e00cb 122 Pfam PF08479 POTRA domain, ShlB-type 71 122 2.5E-10 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type APECO1_RS23915 667f9e09e04215b45ee5db325c3e00cb 122 PANTHER PTHR34597:SF2 30 122 2.9E-23 T 22-04-2016 APECO1_RS23915 667f9e09e04215b45ee5db325c3e00cb 122 PANTHER PTHR34597 30 122 2.9E-23 T 22-04-2016 APECO1_RS08070 2adaa96705c782e16b558e17657fff03 136 Gene3D G3DSA:1.20.1050.10 20 122 6.0E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS08070 2adaa96705c782e16b558e17657fff03 136 PANTHER PTHR11260 1 136 3.6E-33 T 22-04-2016 APECO1_RS08070 2adaa96705c782e16b558e17657fff03 136 SUPERFAMILY SSF47616 16 131 2.42E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APECO1_RS08070 2adaa96705c782e16b558e17657fff03 136 PANTHER PTHR11260:SF178 1 136 3.6E-33 T 22-04-2016 APECO1_RS17050 a2333a3bb79bd06112d44f7554d76666 226 Gene3D G3DSA:1.10.10.10 10 48 2.9E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17050 a2333a3bb79bd06112d44f7554d76666 226 Pfam PF13280 WYL domain 151 196 4.5E-8 T 22-04-2016 IPR026881 WYL domain APECO1_RS11100 bc1d9db795db2a7d088a9c778c3ba3ff 798 Gene3D G3DSA:3.40.50.300 182 330 1.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11100 bc1d9db795db2a7d088a9c778c3ba3ff 798 Gene3D G3DSA:3.40.50.300 48 126 1.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11100 bc1d9db795db2a7d088a9c778c3ba3ff 798 SUPERFAMILY SSF52540 50 122 1.22E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11100 bc1d9db795db2a7d088a9c778c3ba3ff 798 SUPERFAMILY SSF52540 200 337 1.22E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS11100 bc1d9db795db2a7d088a9c778c3ba3ff 798 Pfam PF00350 Dynamin family 71 299 3.2E-18 T 22-04-2016 IPR022812 Dynamin superfamily APECO1_RS10880 4dffb9ab0d6d512b5c54ab339f147549 249 PANTHER PTHR32093:SF0 9 226 2.6E-19 T 22-04-2016 APECO1_RS10880 4dffb9ab0d6d512b5c54ab339f147549 249 Pfam PF11924 Invasin beta-domain of outer membrane 168 225 2.7E-7 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane APECO1_RS10880 4dffb9ab0d6d512b5c54ab339f147549 249 PANTHER PTHR32093 9 226 2.6E-19 T 22-04-2016 APECO1_RS03755 4a0c4fdc9214c1e6badffb982cd5f29f 384 PANTHER PTHR13693 14 381 1.3E-180 T 22-04-2016 APECO1_RS03755 4a0c4fdc9214c1e6badffb982cd5f29f 384 Gene3D G3DSA:3.40.640.10 58 269 1.9E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS03755 4a0c4fdc9214c1e6badffb982cd5f29f 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 381 2.8E-148 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 APECO1_RS03755 4a0c4fdc9214c1e6badffb982cd5f29f 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APECO1_RS03755 4a0c4fdc9214c1e6badffb982cd5f29f 384 SUPERFAMILY SSF53383 4 380 1.14E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS03755 4a0c4fdc9214c1e6badffb982cd5f29f 384 PANTHER PTHR13693:SF53 14 381 1.3E-180 T 22-04-2016 APECO1_RS03755 4a0c4fdc9214c1e6badffb982cd5f29f 384 Pfam PF00155 Aminotransferase class I and II 41 380 7.4E-68 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS03755 4a0c4fdc9214c1e6badffb982cd5f29f 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 50.72 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 APECO1_RS03755 4a0c4fdc9214c1e6badffb982cd5f29f 384 Gene3D G3DSA:3.90.1150.10 270 381 1.5E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 PANTHER PTHR11757:SF3 3 683 0.0 T 22-04-2016 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 Gene3D G3DSA:2.130.10.120 73 407 1.2E-98 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 2.7E-54 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 2.7E-54 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 2.7E-54 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 2.7E-54 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 2.7E-54 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 2.7E-54 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 Gene3D G3DSA:3.40.50.1820 416 647 2.4E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 PANTHER PTHR11757 3 683 0.0 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 SUPERFAMILY SSF50993 2 408 1.8E-82 T 22-04-2016 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 Pfam PF00326 Prolyl oligopeptidase family 463 676 6.7E-69 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 507 537 - T 22-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 SUPERFAMILY SSF53474 414 655 6.12E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS09880 a267bd8c96c927db77954224484f3847 686 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 403 1.0E-118 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APECO1_RS18565 33e7dc7d11d7b539319895ea6c933e23 142 PIRSF PIRSF002181 1 142 5.9E-51 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APECO1_RS18565 33e7dc7d11d7b539319895ea6c933e23 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 5.6E-68 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 APECO1_RS18565 33e7dc7d11d7b539319895ea6c933e23 142 SUPERFAMILY SSF52161 1 140 1.83E-60 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APECO1_RS18565 33e7dc7d11d7b539319895ea6c933e23 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 APECO1_RS18565 33e7dc7d11d7b539319895ea6c933e23 142 PANTHER PTHR11545 1 142 2.4E-81 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APECO1_RS18565 33e7dc7d11d7b539319895ea6c933e23 142 Pfam PF00572 Ribosomal protein L13 15 138 6.2E-57 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APECO1_RS18565 33e7dc7d11d7b539319895ea6c933e23 142 Gene3D G3DSA:3.90.1180.10 3 141 3.4E-65 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APECO1_RS18565 33e7dc7d11d7b539319895ea6c933e23 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.455 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APECO1_RS01410 c7478d5e4865660a66a5195e932e03bd 229 SUPERFAMILY SSF46785 54 92 7.35E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11645 9e402af0a90bc1fc7cf1ff311a5bdbfc 427 Gene3D G3DSA:3.40.50.2020 323 362 7.1E-7 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS11645 9e402af0a90bc1fc7cf1ff311a5bdbfc 427 SUPERFAMILY SSF56784 32 161 8.43E-7 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS11645 9e402af0a90bc1fc7cf1ff311a5bdbfc 427 SUPERFAMILY SSF53271 311 363 1.7E-6 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APECO1_RS11645 9e402af0a90bc1fc7cf1ff311a5bdbfc 427 Gene3D G3DSA:3.40.50.1000 4 142 4.5E-7 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS00120 2af455f4584f2af725c2547c29bbbe1d 72 ProDom PD056390 YAAY CYTOPLASMIC STY0053 ECS0027 3 72 3.0E-33 T 22-04-2016 IPR020105 Uncharacterised protein family YaaY APECO1_RS00120 2af455f4584f2af725c2547c29bbbe1d 72 Pfam PF10837 Protein of unknown function (DUF2575) 2 72 1.7E-46 T 22-04-2016 IPR020105 Uncharacterised protein family YaaY APECO1_RS06440 9373b34cd3b9d01467996f0878702335 44 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 10 44 8.1E-25 T 22-04-2016 IPR025253 Type I toxin-antitoxin system, toxin Ldr APECO1_RS00200 86c88c69465b16548b2c256009e82f38 131 ProDom PD081346 TRANSCRIPTIONAL CAIF OPERON REGULATOR CAI ACTIVATOR TRANSCRIPTION ACTIVATORY FIX REGULATION 1 131 9.0E-73 T 22-04-2016 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 APECO1_RS00200 86c88c69465b16548b2c256009e82f38 131 Pfam PF07180 Protein of unknown function (DUF1401) 8 61 4.8E-6 T 22-04-2016 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 APECO1_RS19945 f8783482851819e38a88ca1111d22b10 157 PANTHER PTHR30505:SF2 1 157 8.8E-46 T 22-04-2016 APECO1_RS19945 f8783482851819e38a88ca1111d22b10 157 Gene3D G3DSA:3.40.930.10 6 150 3.8E-39 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS19945 f8783482851819e38a88ca1111d22b10 157 PANTHER PTHR30505 1 157 8.8E-46 T 22-04-2016 APECO1_RS19945 f8783482851819e38a88ca1111d22b10 157 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 4.0E-31 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS19945 f8783482851819e38a88ca1111d22b10 157 SUPERFAMILY SSF55804 6 150 4.84E-35 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS06815 f374e89375355efd2664f2accc893e65 77 Pfam PF13132 Domain of unknown function (DUF3950) 21 50 5.1E-19 T 22-04-2016 IPR025030 Domain of unknown function DUF3950 APECO1_RS25425 68bba8857485218c3cb1aad96dc971f9 128 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 1 121 8.0E-40 T 22-04-2016 IPR010027 Bacteriophage lambda, GpG, minor tail APECO1_RS25425 68bba8857485218c3cb1aad96dc971f9 128 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 1 128 1.8E-55 T 22-04-2016 IPR010027 Bacteriophage lambda, GpG, minor tail APECO1_RS18550 f830941908455cffa71f768b2c5b2a65 165 PANTHER PTHR37486 2 165 4.3E-93 T 22-04-2016 APECO1_RS18550 f830941908455cffa71f768b2c5b2a65 165 SUPERFAMILY SSF101738 4 119 7.46E-49 T 22-04-2016 IPR007481 Stringent starvation protein B APECO1_RS18550 f830941908455cffa71f768b2c5b2a65 165 Pfam PF04386 Stringent starvation protein B 9 165 1.3E-45 T 22-04-2016 IPR007481 Stringent starvation protein B APECO1_RS18550 f830941908455cffa71f768b2c5b2a65 165 Gene3D G3DSA:2.30.30.220 4 111 1.5E-52 T 22-04-2016 IPR007481 Stringent starvation protein B APECO1_RS18550 f830941908455cffa71f768b2c5b2a65 165 PANTHER PTHR37486:SF1 2 165 4.3E-93 T 22-04-2016 APECO1_RS18550 f830941908455cffa71f768b2c5b2a65 165 PIRSF PIRSF005276 3 165 1.2E-61 T 22-04-2016 IPR007481 Stringent starvation protein B APECO1_RS02025 e3c2f30ca668e7958fc86fe92c9a4e05 400 SUPERFAMILY SSF56300 1 335 3.95E-60 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS02025 e3c2f30ca668e7958fc86fe92c9a4e05 400 Gene3D G3DSA:3.60.21.10 1 275 4.0E-66 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APECO1_RS02025 e3c2f30ca668e7958fc86fe92c9a4e05 400 Pfam PF00149 Calcineurin-like phosphoesterase 1 225 7.6E-19 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APECO1_RS02025 e3c2f30ca668e7958fc86fe92c9a4e05 400 PANTHER PTHR30337 1 399 4.6E-135 T 22-04-2016 APECO1_RS02025 e3c2f30ca668e7958fc86fe92c9a4e05 400 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 254 4.9E-95 T 22-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 APECO1_RS02025 e3c2f30ca668e7958fc86fe92c9a4e05 400 PANTHER PTHR30337:SF0 1 399 4.6E-135 T 22-04-2016 APECO1_RS02025 e3c2f30ca668e7958fc86fe92c9a4e05 400 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 276 373 7.3E-25 T 22-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain APECO1_RS10450 3b05598e9528ccacf0a51f6b1ee989d8 156 Gene3D G3DSA:3.40.960.10 21 154 7.2E-51 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APECO1_RS10450 3b05598e9528ccacf0a51f6b1ee989d8 156 Pfam PF03852 DNA mismatch endonuclease Vsr 3 74 1.6E-39 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APECO1_RS10450 3b05598e9528ccacf0a51f6b1ee989d8 156 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 1.1E-54 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APECO1_RS10450 3b05598e9528ccacf0a51f6b1ee989d8 156 SUPERFAMILY SSF52980 2 153 2.47E-54 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APECO1_RS10450 3b05598e9528ccacf0a51f6b1ee989d8 156 PIRSF PIRSF018267 1 150 7.3E-52 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.5E-40 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 PANTHER PTHR12029 3 242 1.2E-85 T 22-04-2016 APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 1.5E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 SUPERFAMILY SSF75217 68 242 3.2E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 Gene3D G3DSA:3.30.1330.30 1 76 1.5E-27 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 Gene3D G3DSA:3.40.1280.10 93 242 1.2E-54 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 SMART SM00967 4 80 3.9E-21 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 SUPERFAMILY SSF55315 2 76 5.18E-21 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.502 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB APECO1_RS24305 408cf5369cfd018aab68e18204ca5547 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 9.3E-95 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 APECO1_RS22255 931f1c61c342bfc92d80ad515f11a987 464 Pfam PF16966 Porin-like glycoporin RafY 104 464 2.9E-168 T 22-04-2016 IPR016963 Glycoporin RafY APECO1_RS22255 931f1c61c342bfc92d80ad515f11a987 464 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 54 9.1E-14 T 22-04-2016 IPR021570 LamB-type porin N-terminal domain APECO1_RS22255 931f1c61c342bfc92d80ad515f11a987 464 SUPERFAMILY SSF56935 101 461 6.96E-7 T 22-04-2016 APECO1_RS22255 931f1c61c342bfc92d80ad515f11a987 464 PIRSF PIRSF030989 2 464 1.6E-270 T 22-04-2016 IPR016963 Glycoporin RafY APECO1_RS16720 bdb3d757589af0a6be54562bf696dbfd 234 Gene3D G3DSA:3.20.20.10 1 233 5.7E-93 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS16720 bdb3d757589af0a6be54562bf696dbfd 234 PANTHER PTHR10146 1 234 2.6E-106 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 APECO1_RS16720 bdb3d757589af0a6be54562bf696dbfd 234 Pfam PF01168 Alanine racemase, N-terminal domain 7 229 3.5E-29 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APECO1_RS16720 bdb3d757589af0a6be54562bf696dbfd 234 SUPERFAMILY SSF51419 1 227 1.57E-79 T 22-04-2016 IPR029066 PLP-binding barrel APECO1_RS16720 bdb3d757589af0a6be54562bf696dbfd 234 PIRSF PIRSF004848 1 234 1.2E-74 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 APECO1_RS16720 bdb3d757589af0a6be54562bf696dbfd 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 1.2E-104 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 APECO1_RS16720 bdb3d757589af0a6be54562bf696dbfd 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 APECO1_RS08435 d1d0d95ebfb4b765fa8467b2e4f04f3d 299 SUPERFAMILY SSF103481 42 132 2.48E-11 T 22-04-2016 APECO1_RS08435 d1d0d95ebfb4b765fa8467b2e4f04f3d 299 SUPERFAMILY SSF103481 208 287 1.31E-9 T 22-04-2016 APECO1_RS08435 d1d0d95ebfb4b765fa8467b2e4f04f3d 299 Pfam PF00892 EamA-like transporter family 143 286 1.6E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS08435 d1d0d95ebfb4b765fa8467b2e4f04f3d 299 Pfam PF00892 EamA-like transporter family 7 130 7.6E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APECO1_RS08435 d1d0d95ebfb4b765fa8467b2e4f04f3d 299 PANTHER PTHR32322 3 298 1.3E-116 T 22-04-2016 APECO1_RS08435 d1d0d95ebfb4b765fa8467b2e4f04f3d 299 PANTHER PTHR32322:SF9 3 298 1.3E-116 T 22-04-2016 APECO1_RS13695 75284bc98e8ba314b8d9e37c2f308316 350 SMART SM00342 256 342 2.9E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS13695 75284bc98e8ba314b8d9e37c2f308316 350 Pfam PF12833 Helix-turn-helix domain 262 342 5.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APECO1_RS13695 75284bc98e8ba314b8d9e37c2f308316 350 Gene3D G3DSA:1.10.10.60 237 295 6.9E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS13695 75284bc98e8ba314b8d9e37c2f308316 350 PANTHER PTHR11019:SF117 238 350 1.1E-83 T 22-04-2016 APECO1_RS13695 75284bc98e8ba314b8d9e37c2f308316 350 SUPERFAMILY SSF46689 240 290 4.3E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS13695 75284bc98e8ba314b8d9e37c2f308316 350 PANTHER PTHR11019 238 350 1.1E-83 T 22-04-2016 APECO1_RS13695 75284bc98e8ba314b8d9e37c2f308316 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 293 338 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APECO1_RS08285 c840139ee779763cdc1dc1e7f378e085 167 PANTHER PTHR33420 1 167 6.1E-95 T 22-04-2016 APECO1_RS08285 c840139ee779763cdc1dc1e7f378e085 167 Gene3D G3DSA:2.60.40.1090 27 163 2.3E-23 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS08285 c840139ee779763cdc1dc1e7f378e085 167 SUPERFAMILY SSF49401 27 167 7.95E-24 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS08285 c840139ee779763cdc1dc1e7f378e085 167 PANTHER PTHR33420:SF6 1 167 6.1E-95 T 22-04-2016 APECO1_RS05180 35ccf55c71f833fe526229720fa218df 807 Gene3D G3DSA:1.25.40.10 292 334 4.5E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS05180 35ccf55c71f833fe526229720fa218df 807 Gene3D G3DSA:1.25.40.10 423 503 4.5E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS05180 35ccf55c71f833fe526229720fa218df 807 SUPERFAMILY SSF48452 451 503 1.08E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS05180 35ccf55c71f833fe526229720fa218df 807 SUPERFAMILY SSF48452 313 349 1.08E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS05180 35ccf55c71f833fe526229720fa218df 807 SUPERFAMILY SSF48452 98 165 1.08E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS05180 35ccf55c71f833fe526229720fa218df 807 Gene3D G3DSA:1.25.40.10 98 170 2.4E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS05180 35ccf55c71f833fe526229720fa218df 807 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 17 807 2.5E-287 T 22-04-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 APECO1_RS11025 4bb4d21751005d9ffdfae5b09389b048 285 Pfam PF01610 Transposase 6 105 1.1E-11 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain APECO1_RS11025 4bb4d21751005d9ffdfae5b09389b048 285 Gene3D G3DSA:1.10.10.60 118 154 1.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS24855 95c3b50ec8ce054701bfb9cf0a44b4a4 176 SUPERFAMILY SSF49401 33 176 1.64E-34 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS24855 95c3b50ec8ce054701bfb9cf0a44b4a4 176 PANTHER PTHR33420 1 176 1.9E-58 T 22-04-2016 APECO1_RS24855 95c3b50ec8ce054701bfb9cf0a44b4a4 176 Gene3D G3DSA:2.60.40.1090 26 176 2.0E-41 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS24855 95c3b50ec8ce054701bfb9cf0a44b4a4 176 PANTHER PTHR33420:SF1 1 176 1.9E-58 T 22-04-2016 APECO1_RS24855 95c3b50ec8ce054701bfb9cf0a44b4a4 176 Pfam PF00419 Fimbrial protein 28 176 6.6E-21 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS10605 104ce806586e789de7fe7f5ec38d2d8d 105 Pfam PF05135 Phage gp6-like head-tail connector protein 5 101 1.1E-19 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein APECO1_RS10605 104ce806586e789de7fe7f5ec38d2d8d 105 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 5 101 4.6E-9 T 22-04-2016 IPR006450 Phage protein of unkonwn function APECO1_RS02325 8c0fc28afdc8cc4f0ff842ba48eac564 156 Pfam PF10777 Inner membrane protein YlaC 1 152 8.8E-67 T 22-04-2016 IPR019713 Inner membrane protein YlaC APECO1_RS00765 49aa0db159c7b552ca6ffcce23aaaa18 196 Gene3D G3DSA:2.60.40.1090 30 196 3.7E-16 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS00765 49aa0db159c7b552ca6ffcce23aaaa18 196 Pfam PF00419 Fimbrial protein 35 196 3.1E-9 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS00765 49aa0db159c7b552ca6ffcce23aaaa18 196 SUPERFAMILY SSF49401 32 196 7.95E-15 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS13865 9c41cf092e64f7d96c6922f164d7a6cd 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 39.428 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC APECO1_RS13865 9c41cf092e64f7d96c6922f164d7a6cd 344 PIRSF PIRSF026343 9 344 1.3E-149 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC APECO1_RS13865 9c41cf092e64f7d96c6922f164d7a6cd 344 Pfam PF06804 NlpB/DapX lipoprotein 41 342 9.3E-112 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein APECO1_RS24040 b6a422c3a3e16d7bf5d8ff442888abec 167 Pfam PF03400 IS1 transposase 37 167 1.9E-77 T 22-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 APECO1_RS24040 b6a422c3a3e16d7bf5d8ff442888abec 167 PANTHER PTHR33293 30 166 4.6E-46 T 22-04-2016 APECO1_RS24020 b6a422c3a3e16d7bf5d8ff442888abec 167 Pfam PF03400 IS1 transposase 37 167 1.9E-77 T 22-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 APECO1_RS24020 b6a422c3a3e16d7bf5d8ff442888abec 167 PANTHER PTHR33293 30 166 4.6E-46 T 22-04-2016 APECO1_RS22315 93ba876a53de13a9ff534aabf311b1e8 224 PANTHER PTHR30212:SF2 21 223 1.2E-78 T 22-04-2016 APECO1_RS22315 93ba876a53de13a9ff534aabf311b1e8 224 Gene3D G3DSA:2.40.33.20 4 223 1.4E-87 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like APECO1_RS22315 93ba876a53de13a9ff534aabf311b1e8 224 Pfam PF03473 MOSC domain 47 159 6.5E-21 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 APECO1_RS22315 93ba876a53de13a9ff534aabf311b1e8 224 PANTHER PTHR30212 21 223 1.2E-78 T 22-04-2016 APECO1_RS22315 93ba876a53de13a9ff534aabf311b1e8 224 Pfam PF03475 3-alpha domain 169 211 1.5E-14 T 22-04-2016 IPR005163 3-alpha domain APECO1_RS22315 93ba876a53de13a9ff534aabf311b1e8 224 SUPERFAMILY SSF50800 3 223 1.78E-76 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APECO1_RS00920 6dc7d1e6e71851bc200d82e5e465a683 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 243 6.5E-108 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APECO1_RS00920 6dc7d1e6e71851bc200d82e5e465a683 252 SUPERFAMILY SSF64005 18 239 3.27E-88 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APECO1_RS00920 6dc7d1e6e71851bc200d82e5e465a683 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 APECO1_RS00920 6dc7d1e6e71851bc200d82e5e465a683 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 40.266 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APECO1_RS00920 6dc7d1e6e71851bc200d82e5e465a683 252 PANTHER PTHR10291 18 244 7.7E-124 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APECO1_RS00920 6dc7d1e6e71851bc200d82e5e465a683 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 6.7E-82 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APECO1_RS00920 6dc7d1e6e71851bc200d82e5e465a683 252 Gene3D G3DSA:3.40.1180.10 18 246 6.1E-99 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APECO1_RS19350 e0f867544825494807d76ae8955efebf 292 PANTHER PTHR10819 7 292 2.3E-119 T 22-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 APECO1_RS19350 e0f867544825494807d76ae8955efebf 292 Pfam PF02126 Phosphotriesterase family 1 292 1.4E-142 T 22-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 APECO1_RS19350 e0f867544825494807d76ae8955efebf 292 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 7 15 - T 22-04-2016 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 APECO1_RS19350 e0f867544825494807d76ae8955efebf 292 Gene3D G3DSA:3.20.20.140 2 292 8.1E-114 T 22-04-2016 APECO1_RS19350 e0f867544825494807d76ae8955efebf 292 SUPERFAMILY SSF51556 3 291 7.21E-99 T 22-04-2016 IPR032466 Metal-dependent hydrolase APECO1_RS19350 e0f867544825494807d76ae8955efebf 292 PIRSF PIRSF016839 1 292 2.3E-133 T 22-04-2016 APECO1_RS26670 fd12d9b3034e038a40ddd8052979fce7 68 Pfam PF00696 Amino acid kinase family 6 68 7.8E-25 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS26670 fd12d9b3034e038a40ddd8052979fce7 68 Gene3D G3DSA:3.40.1160.10 6 68 1.1E-29 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS26670 fd12d9b3034e038a40ddd8052979fce7 68 SUPERFAMILY SSF53633 1 68 1.2E-29 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APECO1_RS26670 fd12d9b3034e038a40ddd8052979fce7 68 PANTHER PTHR21499:SF1 4 68 1.4E-33 T 22-04-2016 APECO1_RS26670 fd12d9b3034e038a40ddd8052979fce7 68 PANTHER PTHR21499 4 68 1.4E-33 T 22-04-2016 APECO1_RS11720 3896cde29b91edc6bc2e05f990f6df2e 451 PIRSF PIRSF006304 2 451 8.3E-169 T 22-04-2016 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 APECO1_RS11720 3896cde29b91edc6bc2e05f990f6df2e 451 PANTHER PTHR37324 1 449 4.0E-268 T 22-04-2016 APECO1_RS11720 3896cde29b91edc6bc2e05f990f6df2e 451 Pfam PF03611 PTS system sugar-specific permease component 8 385 1.0E-77 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APECO1_RS11720 3896cde29b91edc6bc2e05f990f6df2e 451 PANTHER PTHR37324:SF2 1 449 4.0E-268 T 22-04-2016 APECO1_RS11720 3896cde29b91edc6bc2e05f990f6df2e 451 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 9 413 1.1E-213 T 22-04-2016 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 APECO1_RS18190 c0990e6f34e6bacb138fd96ccb372012 196 PANTHER PTHR30390 1 195 6.4E-134 T 22-04-2016 APECO1_RS18190 c0990e6f34e6bacb138fd96ccb372012 196 PANTHER PTHR30390:SF5 1 195 6.4E-134 T 22-04-2016 APECO1_RS18190 c0990e6f34e6bacb138fd96ccb372012 196 Gene3D G3DSA:3.40.50.10490 2 191 6.4E-56 T 22-04-2016 APECO1_RS18190 c0990e6f34e6bacb138fd96ccb372012 196 Pfam PF13580 SIS domain 9 144 4.4E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APECO1_RS18190 c0990e6f34e6bacb138fd96ccb372012 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 62.808 T 22-04-2016 IPR023070 DnaA initiator-associating protein APECO1_RS18190 c0990e6f34e6bacb138fd96ccb372012 196 SUPERFAMILY SSF53697 2 191 1.27E-51 T 22-04-2016 APECO1_RS16660 73340d20313520da6931f65a511eadf0 43 ProDom PD050163 YQGB INNER MEMBRANE STY3241 1 39 2.0E-16 T 22-04-2016 IPR020196 Uncharacterised protein family YqgB APECO1_RS16660 73340d20313520da6931f65a511eadf0 43 Pfam PF11036 Virulence promoting factor 1 43 2.8E-33 T 22-04-2016 IPR020196 Uncharacterised protein family YqgB APECO1_RS05875 30373f30d212db6f3da966841e69b472 96 Gene3D G3DSA:1.10.10.10 6 64 3.5E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS24525 6368f0cdf1a01dc384e1c2397a7d71e6 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.1E-29 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 APECO1_RS24525 6368f0cdf1a01dc384e1c2397a7d71e6 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 5.0E-30 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 APECO1_RS24525 6368f0cdf1a01dc384e1c2397a7d71e6 68 Gene3D G3DSA:3.30.1910.10 1 65 5.0E-37 T 22-04-2016 APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 PANTHER PTHR19384 141 172 1.6E-93 T 22-04-2016 APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 PANTHER PTHR19384 1 119 1.6E-93 T 22-04-2016 APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 TIGRFAM TIGR01752 flav_long: flavodoxin 3 168 1.8E-69 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 SUPERFAMILY SSF52218 1 168 1.51E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 Gene3D G3DSA:3.40.50.360 1 168 5.9E-56 T 22-04-2016 IPR029039 Flavoprotein-like domain APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 Pfam PF00258 Flavodoxin 5 160 4.0E-28 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 PANTHER PTHR19384:SF73 141 172 1.6E-93 T 22-04-2016 APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 PANTHER PTHR19384:SF73 1 119 1.6E-93 T 22-04-2016 APECO1_RS16435 bdb84d882dd9a33c97d64ebed39a9242 173 PIRSF PIRSF038996 1 172 2.3E-55 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APECO1_RS00645 6df6bf3720553e0671797e9276b6c768 585 PANTHER PTHR40269 1 585 5.7E-166 T 22-04-2016 APECO1_RS00645 6df6bf3720553e0671797e9276b6c768 585 Pfam PF11737 Protein of unknown function (DUF3300) 75 333 7.6E-80 T 22-04-2016 IPR021728 Protein of unknown function DUF3300 APECO1_RS00645 6df6bf3720553e0671797e9276b6c768 585 PANTHER PTHR40269:SF1 1 585 5.7E-166 T 22-04-2016 APECO1_RS01035 0ea44a49b70285717a7432533a30b5a1 134 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 133 36.266 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 APECO1_RS01035 0ea44a49b70285717a7432533a30b5a1 134 Pfam PF16358 RcsF lipoprotein 29 132 7.6E-50 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 APECO1_RS08890 a4f78cb828dac936b61acb6e0b8c6622 389 PANTHER PTHR23501:SF4 1 384 4.2E-157 T 22-04-2016 APECO1_RS08890 a4f78cb828dac936b61acb6e0b8c6622 389 PANTHER PTHR23501 1 384 4.2E-157 T 22-04-2016 APECO1_RS08890 a4f78cb828dac936b61acb6e0b8c6622 389 SUPERFAMILY SSF103473 6 379 7.72E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS08890 a4f78cb828dac936b61acb6e0b8c6622 389 Gene3D G3DSA:1.20.1250.20 200 381 1.4E-12 T 22-04-2016 APECO1_RS08890 a4f78cb828dac936b61acb6e0b8c6622 389 Gene3D G3DSA:1.20.1250.20 6 192 5.9E-24 T 22-04-2016 APECO1_RS08890 a4f78cb828dac936b61acb6e0b8c6622 389 Pfam PF07690 Major Facilitator Superfamily 10 337 6.8E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS00095 fd9b6f5fc3d82244b587a902722b8d4c 497 Gene3D G3DSA:3.40.720.10 28 399 6.0E-111 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APECO1_RS00095 fd9b6f5fc3d82244b587a902722b8d4c 497 SUPERFAMILY SSF53649 29 478 1.6E-123 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APECO1_RS00095 fd9b6f5fc3d82244b587a902722b8d4c 497 PANTHER PTHR10342 3 478 4.6E-172 T 22-04-2016 APECO1_RS00095 fd9b6f5fc3d82244b587a902722b8d4c 497 PANTHER PTHR10342:SF22 3 478 4.6E-172 T 22-04-2016 APECO1_RS00095 fd9b6f5fc3d82244b587a902722b8d4c 497 Pfam PF00884 Sulfatase 31 377 8.8E-71 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APECO1_RS00095 fd9b6f5fc3d82244b587a902722b8d4c 497 ProSitePatterns PS00523 Sulfatases signature 1. 77 89 - T 22-04-2016 IPR024607 Sulfatase, conserved site APECO1_RS00095 fd9b6f5fc3d82244b587a902722b8d4c 497 Gene3D G3DSA:3.30.1120.10 421 479 1.8E-12 T 22-04-2016 APECO1_RS02115 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 Gene3D G3DSA:1.10.940.10 3 135 6.6E-45 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APECO1_RS02115 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 131 3.1E-45 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 APECO1_RS02115 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 PANTHER PTHR11078 1 139 1.1E-56 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 APECO1_RS02115 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 SUPERFAMILY SSF48013 3 134 2.35E-42 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APECO1_RS02115 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.572 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 APECO1_RS02115 a74b97cb525ada3d7b8a4e8a02f1cdc7 139 Pfam PF01029 NusB family 7 131 3.7E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APECO1_RS10285 4833271efe54de8be47801552bdb8321 121 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 119 25.367 T 22-04-2016 IPR008622 Flagellar protein FliT APECO1_RS10285 4833271efe54de8be47801552bdb8321 121 Gene3D G3DSA:1.20.58.380 8 93 3.3E-19 T 22-04-2016 APECO1_RS10285 4833271efe54de8be47801552bdb8321 121 Pfam PF05400 Flagellar protein FliT 21 106 1.4E-20 T 22-04-2016 IPR008622 Flagellar protein FliT APECO1_RS15260 3ab08478dfcff1aa19d9637a5a58fc6d 394 Gene3D G3DSA:1.20.1250.20 10 189 6.1E-24 T 22-04-2016 APECO1_RS15260 3ab08478dfcff1aa19d9637a5a58fc6d 394 Pfam PF07690 Major Facilitator Superfamily 218 385 7.8E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS15260 3ab08478dfcff1aa19d9637a5a58fc6d 394 Pfam PF07690 Major Facilitator Superfamily 17 198 2.2E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS15260 3ab08478dfcff1aa19d9637a5a58fc6d 394 Gene3D G3DSA:1.20.1250.20 217 386 2.7E-10 T 22-04-2016 APECO1_RS15260 3ab08478dfcff1aa19d9637a5a58fc6d 394 PANTHER PTHR23501 3 394 4.5E-214 T 22-04-2016 APECO1_RS15260 3ab08478dfcff1aa19d9637a5a58fc6d 394 SUPERFAMILY SSF103473 9 388 1.31E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS15260 3ab08478dfcff1aa19d9637a5a58fc6d 394 PANTHER PTHR23501:SF79 3 394 4.5E-214 T 22-04-2016 APECO1_RS12555 af0c7dbba89895e58ad06a6ef873f1fb 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 56 127 1.5E-5 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APECO1_RS12555 af0c7dbba89895e58ad06a6ef873f1fb 200 Hamap MF_01868 Lipopolysaccharide core heptose(II)-phosphate phosphatase [ais]. 1 200 62.702 T 22-04-2016 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase GO:0016791 UniPathway: UPA00451 APECO1_RS12555 af0c7dbba89895e58ad06a6ef873f1fb 200 PIRSF PIRSF011416 1 200 1.1E-88 T 22-04-2016 IPR011310 Lipopolysaccharide core heptose(II)-phosphate phosphatase GO:0016791 UniPathway: UPA00451 APECO1_RS12555 af0c7dbba89895e58ad06a6ef873f1fb 200 Gene3D G3DSA:3.40.50.1240 56 167 3.5E-10 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS12555 af0c7dbba89895e58ad06a6ef873f1fb 200 SUPERFAMILY SSF53254 55 171 8.25E-16 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APECO1_RS20455 4f7ef4f0d7fc188abb5ab29c6fbe5bc0 393 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 383 6.3E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS20455 4f7ef4f0d7fc188abb5ab29c6fbe5bc0 393 PANTHER PTHR32196 1 183 7.4E-170 T 22-04-2016 APECO1_RS20455 4f7ef4f0d7fc188abb5ab29c6fbe5bc0 393 PANTHER PTHR32196 239 392 7.4E-170 T 22-04-2016 APECO1_RS20455 4f7ef4f0d7fc188abb5ab29c6fbe5bc0 393 PANTHER PTHR32196:SF32 1 183 7.4E-170 T 22-04-2016 APECO1_RS20455 4f7ef4f0d7fc188abb5ab29c6fbe5bc0 393 PANTHER PTHR32196:SF32 239 392 7.4E-170 T 22-04-2016 APECO1_RS04225 8509567ff56460550a5779280f4c5d2b 337 Gene3D G3DSA:3.90.25.10 181 332 9.1E-20 T 22-04-2016 APECO1_RS04225 8509567ff56460550a5779280f4c5d2b 337 SUPERFAMILY SSF51735 298 335 7.85E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS04225 8509567ff56460550a5779280f4c5d2b 337 SUPERFAMILY SSF51735 1 270 7.85E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS04225 8509567ff56460550a5779280f4c5d2b 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 234 1.1E-26 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APECO1_RS04225 8509567ff56460550a5779280f4c5d2b 337 Gene3D G3DSA:3.40.50.720 1 180 1.6E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS05990 0a6a4ec4d400c3dcc0b150abf693cd50 115 SUPERFAMILY SSF51274 13 113 3.14E-44 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 APECO1_RS05990 0a6a4ec4d400c3dcc0b150abf693cd50 115 Gene3D G3DSA:2.40.300.10 1 114 6.7E-55 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 APECO1_RS05990 0a6a4ec4d400c3dcc0b150abf693cd50 115 Pfam PF02924 Bacteriophage lambda head decoration protein D 5 109 8.8E-19 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 APECO1_RS05990 0a6a4ec4d400c3dcc0b150abf693cd50 115 ProDom PD020518 CAPSID HEAD PROPHAGE DECORATION SUBUNIT SMALL 3D-STRUCTURE MAJOR GIFSY-1 STRUCTURAL 30 110 6.0E-41 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 APECO1_RS12035 477947941b721bd2982e8dbdf5c4ab9f 385 PANTHER PTHR30590:SF2 2 385 4.0E-155 T 22-04-2016 APECO1_RS12035 477947941b721bd2982e8dbdf5c4ab9f 385 Pfam PF04235 Protein of unknown function (DUF418) 215 374 7.4E-47 T 22-04-2016 IPR007349 Domain of unknown function DUF418 APECO1_RS12035 477947941b721bd2982e8dbdf5c4ab9f 385 PANTHER PTHR30590 2 385 4.0E-155 T 22-04-2016 APECO1_RS11320 7f8d640305f6f5ce602aa6fbc156baaf 292 Pfam PF00483 Nucleotidyl transferase 5 241 7.9E-74 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APECO1_RS11320 7f8d640305f6f5ce602aa6fbc156baaf 292 SUPERFAMILY SSF53448 4 289 3.27E-97 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11320 7f8d640305f6f5ce602aa6fbc156baaf 292 PANTHER PTHR22572:SF105 5 270 8.6E-197 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APECO1_RS11320 7f8d640305f6f5ce602aa6fbc156baaf 292 Gene3D G3DSA:3.90.550.10 4 268 5.9E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS11320 7f8d640305f6f5ce602aa6fbc156baaf 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 3.5E-164 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APECO1_RS11320 7f8d640305f6f5ce602aa6fbc156baaf 292 PANTHER PTHR22572 5 270 8.6E-197 T 22-04-2016 APECO1_RS02705 44336a45150a1e70cbcc98132d5b534f 102 Gene3D G3DSA:1.10.443.10 14 83 2.1E-17 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS02705 44336a45150a1e70cbcc98132d5b534f 102 SUPERFAMILY SSF56349 10 80 2.74E-17 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APECO1_RS02705 44336a45150a1e70cbcc98132d5b534f 102 PANTHER PTHR30349 12 98 3.0E-23 T 22-04-2016 APECO1_RS02705 44336a45150a1e70cbcc98132d5b534f 102 PANTHER PTHR30349:SF20 12 98 3.0E-23 T 22-04-2016 APECO1_RS02705 44336a45150a1e70cbcc98132d5b534f 102 Pfam PF00589 Phage integrase family 5 69 7.9E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APECO1_RS07825 74101bc33104b8f8cf019df3d9166aa5 61 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 14 61 5.0E-21 T 22-04-2016 APECO1_RS07825 74101bc33104b8f8cf019df3d9166aa5 61 Pfam PF13617 YnbE-like lipoprotein 5 59 7.8E-28 T 22-04-2016 IPR025985 YnbE-like lipoprotein APECO1_RS15975 06aee09b185cd805634789bcd95e11ae 445 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 5.8E-124 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 APECO1_RS15975 06aee09b185cd805634789bcd95e11ae 445 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 442 8.1E-131 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 APECO1_RS15975 06aee09b185cd805634789bcd95e11ae 445 PANTHER PTHR35566 1 445 8.2E-201 T 22-04-2016 APECO1_RS15975 06aee09b185cd805634789bcd95e11ae 445 PANTHER PTHR35566:SF3 1 445 8.2E-201 T 22-04-2016 APECO1_RS06890 250cbfbd89b61cdcd2feff9efddc398b 129 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 1 91 8.2E-46 T 22-04-2016 IPR009350 Minor tail T APECO1_RS06890 250cbfbd89b61cdcd2feff9efddc398b 129 Pfam PF06223 Minor tail protein T 1 91 3.8E-31 T 22-04-2016 IPR009350 Minor tail T APECO1_RS01595 65d3f06a88e100d7b740419baaa61261 197 PANTHER PTHR40106 1 189 3.1E-72 T 22-04-2016 APECO1_RS01595 65d3f06a88e100d7b740419baaa61261 197 Pfam PF04224 Protein of unknown function, DUF417 3 182 1.4E-79 T 22-04-2016 IPR007339 Protein of unknown function DUF417 APECO1_RS01595 65d3f06a88e100d7b740419baaa61261 197 PANTHER PTHR40106:SF1 1 189 3.1E-72 T 22-04-2016 APECO1_RS07230 e9921b39277c0b42ae747f7a86edb6b4 74 Pfam PF06667 Phage shock protein B 3 73 1.6E-32 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 APECO1_RS07230 e9921b39277c0b42ae747f7a86edb6b4 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.1E-33 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 APECO1_RS06425 ee1d407a168ccda7dec68cfc7fa9b7eb 130 PANTHER PTHR39594 1 130 2.5E-47 T 22-04-2016 APECO1_RS06425 ee1d407a168ccda7dec68cfc7fa9b7eb 130 PIRSF PIRSF005610 1 125 2.0E-19 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB APECO1_RS06425 ee1d407a168ccda7dec68cfc7fa9b7eb 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 6 127 3.9E-35 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB APECO1_RS15030 9c6a2222f6d6e04ef93834a76061ea56 250 SUPERFAMILY SSF57938 146 195 1.02E-7 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS15030 9c6a2222f6d6e04ef93834a76061ea56 250 Pfam PF03589 Antitermination protein 155 242 1.3E-29 T 22-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 APECO1_RS15030 9c6a2222f6d6e04ef93834a76061ea56 250 Pfam PF03589 Antitermination protein 23 107 2.3E-18 T 22-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 APECO1_RS15030 9c6a2222f6d6e04ef93834a76061ea56 250 Gene3D G3DSA:2.10.230.10 159 193 1.3E-4 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS15030 9c6a2222f6d6e04ef93834a76061ea56 250 Gene3D G3DSA:2.10.230.10 109 158 2.5E-5 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS01960 02ae64be433b4e84e2e4cf17597f0f2b 371 PANTHER PTHR10799:SF657 97 365 7.2E-27 T 22-04-2016 APECO1_RS01960 02ae64be433b4e84e2e4cf17597f0f2b 371 PANTHER PTHR10799 97 365 7.2E-27 T 22-04-2016 APECO1_RS01960 02ae64be433b4e84e2e4cf17597f0f2b 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 206 370 5.1E-66 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS01960 02ae64be433b4e84e2e4cf17597f0f2b 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 366 4.5E-47 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS01960 02ae64be433b4e84e2e4cf17597f0f2b 371 Pfam PF05230 MASE2 domain 40 128 2.3E-28 T 22-04-2016 IPR007894 MASE2 APECO1_RS01960 02ae64be433b4e84e2e4cf17597f0f2b 371 SUPERFAMILY SSF55073 215 368 4.71E-44 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS01960 02ae64be433b4e84e2e4cf17597f0f2b 371 Gene3D G3DSA:3.30.70.270 212 369 1.9E-46 T 22-04-2016 APECO1_RS01960 02ae64be433b4e84e2e4cf17597f0f2b 371 SMART SM00267 199 370 1.0E-66 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS00190 7cc668d81e193398d346fad6151bc9cb 152 PANTHER PTHR33360:SF2 2 145 3.0E-91 T 22-04-2016 APECO1_RS00190 7cc668d81e193398d346fad6151bc9cb 152 SUPERFAMILY SSF143422 2 129 1.44E-44 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APECO1_RS00190 7cc668d81e193398d346fad6151bc9cb 152 Pfam PF01797 Transposase IS200 like 12 129 2.0E-34 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APECO1_RS00190 7cc668d81e193398d346fad6151bc9cb 152 PANTHER PTHR33360 2 145 3.0E-91 T 22-04-2016 APECO1_RS00190 7cc668d81e193398d346fad6151bc9cb 152 Gene3D G3DSA:3.30.70.1290 3 132 5.0E-54 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APECO1_RS00190 7cc668d81e193398d346fad6151bc9cb 152 SMART SM01321 11 129 1.2E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APECO1_RS25175 5b8f7897403e2fd142937f55dc8cdaba 91 Pfam PF07256 Protein of unknown function (DUF1435) 14 88 6.1E-33 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 APECO1_RS25175 5b8f7897403e2fd142937f55dc8cdaba 91 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 14 91 2.0E-37 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 APECO1_RS19885 88ff15d91aa45e3ce29c2f43434c6a78 221 PANTHER PTHR34300:SF1 1 221 1.9E-138 T 22-04-2016 APECO1_RS19885 88ff15d91aa45e3ce29c2f43434c6a78 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 3.7E-69 T 22-04-2016 IPR003744 Protein of unknown function DUF165 APECO1_RS19885 88ff15d91aa45e3ce29c2f43434c6a78 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 2.9E-37 T 22-04-2016 IPR003744 Protein of unknown function DUF165 APECO1_RS19885 88ff15d91aa45e3ce29c2f43434c6a78 221 PANTHER PTHR34300 1 221 1.9E-138 T 22-04-2016 APECO1_RS05120 84b9a5ddd1292aed5d27158395f5759a 363 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 354 2.2E-219 T 22-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 APECO1_RS05120 84b9a5ddd1292aed5d27158395f5759a 363 PANTHER PTHR30011 1 352 1.3E-159 T 22-04-2016 APECO1_RS05120 84b9a5ddd1292aed5d27158395f5759a 363 PANTHER PTHR30011:SF1 1 352 1.3E-159 T 22-04-2016 APECO1_RS05120 84b9a5ddd1292aed5d27158395f5759a 363 SUPERFAMILY SSF51679 1 352 3.24E-79 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS05120 84b9a5ddd1292aed5d27158395f5759a 363 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 360 70.769 T 22-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 APECO1_RS05120 84b9a5ddd1292aed5d27158395f5759a 363 Gene3D G3DSA:3.20.20.30 1 352 1.4E-88 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS05120 84b9a5ddd1292aed5d27158395f5759a 363 Pfam PF00296 Luciferase-like monooxygenase 1 320 3.8E-70 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APECO1_RS10785 e69369d96c87ed4c9238a190c0ed177b 67 Pfam PF07358 Protein of unknown function (DUF1482) 6 61 1.4E-19 T 22-04-2016 IPR009954 Protein of unknown function DUF1482 APECO1_RS13775 4e7bb09a3b4a5832364ce6cf754c21f8 111 PANTHER PTHR40449:SF1 1 111 2.8E-92 T 22-04-2016 APECO1_RS13775 4e7bb09a3b4a5832364ce6cf754c21f8 111 PIRSF PIRSF012296 1 111 1.0E-56 T 22-04-2016 IPR009307 Ethanolamine utilisation EutS GO:0006580 APECO1_RS13775 4e7bb09a3b4a5832364ce6cf754c21f8 111 PANTHER PTHR40449 1 111 2.8E-92 T 22-04-2016 APECO1_RS13775 4e7bb09a3b4a5832364ce6cf754c21f8 111 SUPERFAMILY SSF143414 39 107 6.67E-13 T 22-04-2016 APECO1_RS13775 4e7bb09a3b4a5832364ce6cf754c21f8 111 Pfam PF00936 BMC domain 40 105 7.5E-12 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13775 4e7bb09a3b4a5832364ce6cf754c21f8 111 SMART SM00877 39 111 3.8E-13 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS13795 c78cfe193d66e47a260dc1b2ad301272 347 Pfam PF06674 Protein of unknown function (DUF1176) 25 347 2.4E-97 T 22-04-2016 IPR009560 Protein of unknown function DUF1176 APECO1_RS10790 655e9da36bbaf7bae92a7d2262997acd 823 SUPERFAMILY SSF53098 642 816 3.33E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS10790 655e9da36bbaf7bae92a7d2262997acd 823 Pfam PF16473 3' exoribonuclease, RNase T-like 642 813 1.5E-53 T 22-04-2016 IPR033390 3'-5' exoribonuclease Rv2179c-like domain APECO1_RS10790 655e9da36bbaf7bae92a7d2262997acd 823 Gene3D G3DSA:3.30.420.10 643 814 8.7E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS20800 3764c0c5483f6f09bce5cf35cfc51476 198 SUPERFAMILY SSF48498 84 193 2.67E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APECO1_RS20800 3764c0c5483f6f09bce5cf35cfc51476 198 SUPERFAMILY SSF46689 5 86 4.39E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS20800 3764c0c5483f6f09bce5cf35cfc51476 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.885 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 APECO1_RS20800 3764c0c5483f6f09bce5cf35cfc51476 198 PANTHER PTHR30055:SF58 1 193 2.8E-118 T 22-04-2016 APECO1_RS20800 3764c0c5483f6f09bce5cf35cfc51476 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APECO1_RS20800 3764c0c5483f6f09bce5cf35cfc51476 198 Gene3D G3DSA:1.10.357.10 7 190 3.4E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APECO1_RS20800 3764c0c5483f6f09bce5cf35cfc51476 198 PANTHER PTHR30055 1 193 2.8E-118 T 22-04-2016 APECO1_RS20800 3764c0c5483f6f09bce5cf35cfc51476 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 4.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APECO1_RS02905 e9b407cd402ef39d77772a144291a64a 137 PANTHER PTHR12418:SF34 1 131 5.0E-100 T 22-04-2016 APECO1_RS02905 e9b407cd402ef39d77772a144291a64a 137 SUPERFAMILY SSF54637 1 136 2.86E-31 T 22-04-2016 IPR029069 HotDog domain APECO1_RS02905 e9b407cd402ef39d77772a144291a64a 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 134 1.3E-47 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain APECO1_RS02905 e9b407cd402ef39d77772a144291a64a 137 Hamap MF_00907 Proofreading thioesterase EntH [entH]. 1 137 53.774 T 22-04-2016 IPR026576 Proofreading thioesterase EntH GO:0009239|GO:0016790 UniPathway: UPA00017 APECO1_RS02905 e9b407cd402ef39d77772a144291a64a 137 Pfam PF03061 Thioesterase superfamily 50 127 7.0E-17 T 22-04-2016 IPR006683 Thioesterase domain APECO1_RS02905 e9b407cd402ef39d77772a144291a64a 137 Gene3D G3DSA:3.10.129.10 1 136 1.7E-49 T 22-04-2016 IPR029069 HotDog domain APECO1_RS02905 e9b407cd402ef39d77772a144291a64a 137 PANTHER PTHR12418 1 131 5.0E-100 T 22-04-2016 APECO1_RS17085 db3f1f2671ad1bae10b7699406d551ab 125 SUPERFAMILY SSF143737 8 118 4.71E-57 T 22-04-2016 APECO1_RS17085 db3f1f2671ad1bae10b7699406d551ab 125 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 19 117 9.0E-53 T 22-04-2016 IPR009320 YagB/YeeU/YfjZ APECO1_RS17085 db3f1f2671ad1bae10b7699406d551ab 125 Gene3D G3DSA:3.30.450.20 27 124 1.4E-60 T 22-04-2016 APECO1_RS17075 8b11167050d0e51d0cc11b5f7bbb7abe 158 Pfam PF04002 RadC-like JAB domain 38 157 1.4E-43 T 22-04-2016 IPR025657 RadC-like JAB domain APECO1_RS17075 8b11167050d0e51d0cc11b5f7bbb7abe 158 PANTHER PTHR30471 15 158 6.4E-110 T 22-04-2016 APECO1_RS17075 8b11167050d0e51d0cc11b5f7bbb7abe 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 36 158 3.2E-44 T 22-04-2016 IPR001405 RadC protein APECO1_RS17075 8b11167050d0e51d0cc11b5f7bbb7abe 158 Gene3D G3DSA:3.40.140.10 36 158 3.7E-50 T 22-04-2016 APECO1_RS17075 8b11167050d0e51d0cc11b5f7bbb7abe 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APECO1_RS17075 8b11167050d0e51d0cc11b5f7bbb7abe 158 SUPERFAMILY SSF102712 84 124 7.59E-5 T 22-04-2016 APECO1_RS17075 8b11167050d0e51d0cc11b5f7bbb7abe 158 PANTHER PTHR30471:SF4 15 158 6.4E-110 T 22-04-2016 APECO1_RS07020 7f5ac26f12f01a8cd7f63f4d9965e258 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 1.4E-85 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APECO1_RS07020 7f5ac26f12f01a8cd7f63f4d9965e258 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 6.1E-6 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APECO1_RS07020 7f5ac26f12f01a8cd7f63f4d9965e258 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 4.4E-61 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APECO1_RS07020 7f5ac26f12f01a8cd7f63f4d9965e258 196 PANTHER PTHR30069 6 196 6.5E-72 T 22-04-2016 APECO1_RS07020 7f5ac26f12f01a8cd7f63f4d9965e258 196 SUPERFAMILY SSF52540 7 196 1.78E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS07020 7f5ac26f12f01a8cd7f63f4d9965e258 196 PIRSF PIRSF015617 1 196 5.5E-70 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APECO1_RS07020 7f5ac26f12f01a8cd7f63f4d9965e258 196 Gene3D G3DSA:3.40.50.300 3 196 4.5E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS09885 4b889729317c5c1a0130a17b40883d7a 219 Gene3D G3DSA:1.10.3680.10 66 212 3.4E-14 T 22-04-2016 IPR029024 TerB-like APECO1_RS09885 4b889729317c5c1a0130a17b40883d7a 219 Pfam PF04391 Protein of unknown function (DUF533) 33 209 9.8E-50 T 22-04-2016 IPR007486 Inner membrane protein YebE APECO1_RS09885 4b889729317c5c1a0130a17b40883d7a 219 SUPERFAMILY SSF158682 88 212 2.22E-18 T 22-04-2016 IPR029024 TerB-like APECO1_RS08120 67e7215f24550ddbbc866b5c543e53a1 297 Gene3D G3DSA:3.10.310.10 127 283 5.4E-48 T 22-04-2016 APECO1_RS08120 67e7215f24550ddbbc866b5c543e53a1 297 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 295 2.9E-131 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APECO1_RS08120 67e7215f24550ddbbc866b5c543e53a1 297 Gene3D G3DSA:3.10.310.10 1 126 4.5E-42 T 22-04-2016 APECO1_RS08120 67e7215f24550ddbbc866b5c543e53a1 297 Pfam PF02567 Phenazine biosynthesis-like protein 8 290 1.2E-90 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APECO1_RS08120 67e7215f24550ddbbc866b5c543e53a1 297 PANTHER PTHR13774:SF21 1 296 1.4E-143 T 22-04-2016 APECO1_RS08120 67e7215f24550ddbbc866b5c543e53a1 297 SUPERFAMILY SSF54506 1 294 7.97E-67 T 22-04-2016 APECO1_RS08120 67e7215f24550ddbbc866b5c543e53a1 297 PIRSF PIRSF016184 1 295 4.0E-95 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APECO1_RS08120 67e7215f24550ddbbc866b5c543e53a1 297 PANTHER PTHR13774 1 296 1.4E-143 T 22-04-2016 APECO1_RS14275 8fdfc5b772bb357d9e57c9710e060f7e 372 PIRSF PIRSF004640 1 363 2.0E-148 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APECO1_RS14275 8fdfc5b772bb357d9e57c9710e060f7e 372 SUPERFAMILY SSF56014 265 350 9.81E-10 T 22-04-2016 APECO1_RS14275 8fdfc5b772bb357d9e57c9710e060f7e 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 7.5E-126 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APECO1_RS14275 8fdfc5b772bb357d9e57c9710e060f7e 372 Pfam PF04551 GcpE protein 14 353 7.7E-132 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APECO1_RS14275 8fdfc5b772bb357d9e57c9710e060f7e 372 PANTHER PTHR30454 1 371 6.7E-229 T 22-04-2016 APECO1_RS14275 8fdfc5b772bb357d9e57c9710e060f7e 372 SUPERFAMILY SSF51717 15 208 1.49E-10 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APECO1_RS14275 8fdfc5b772bb357d9e57c9710e060f7e 372 Gene3D G3DSA:3.20.20.70 30 132 1.2E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS14275 8fdfc5b772bb357d9e57c9710e060f7e 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.652 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APECO1_RS17360 8dc186f97bbd0f8b3a35f0af4e971c82 230 SUPERFAMILY SSF52540 7 224 1.12E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS17360 8dc186f97bbd0f8b3a35f0af4e971c82 230 Gene3D G3DSA:3.40.50.300 8 221 1.9E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS03385 3dedf703eda3f92511cffd46892c920f 190 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 2 188 8.1E-101 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APECO1_RS03385 3dedf703eda3f92511cffd46892c920f 190 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.489 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APECO1_RS03385 3dedf703eda3f92511cffd46892c920f 190 Pfam PF02669 K+-transporting ATPase, c chain 5 187 1.8E-68 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APECO1_RS03385 3dedf703eda3f92511cffd46892c920f 190 PANTHER PTHR30042:SF2 1 188 1.3E-89 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APECO1_RS03385 3dedf703eda3f92511cffd46892c920f 190 PANTHER PTHR30042 1 188 1.3E-89 T 22-04-2016 APECO1_RS03385 3dedf703eda3f92511cffd46892c920f 190 PIRSF PIRSF001296 1 190 4.9E-74 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APECO1_RS21045 628fc5e1c1876ee8136fdd79920011d1 571 PANTHER PTHR11819:SF7 2 506 7.3E-186 T 22-04-2016 APECO1_RS21045 628fc5e1c1876ee8136fdd79920011d1 571 PANTHER PTHR11819:SF7 549 570 7.3E-186 T 22-04-2016 APECO1_RS21045 628fc5e1c1876ee8136fdd79920011d1 571 Pfam PF00474 Sodium:solute symporter family 35 442 2.8E-50 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS21045 628fc5e1c1876ee8136fdd79920011d1 571 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 160 185 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS21045 628fc5e1c1876ee8136fdd79920011d1 571 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 443 5.6E-124 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS21045 628fc5e1c1876ee8136fdd79920011d1 571 PANTHER PTHR11819 2 506 7.3E-186 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS21045 628fc5e1c1876ee8136fdd79920011d1 571 PANTHER PTHR11819 549 570 7.3E-186 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS01935 48eca8134a8510ca6323f54c8427d41e 70 Pfam PF10953 Protein of unknown function (DUF2754) 1 70 1.3E-47 T 22-04-2016 IPR020490 Uncharacterised protein family YaiZ APECO1_RS01935 48eca8134a8510ca6323f54c8427d41e 70 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 1 70 1.0E-34 T 22-04-2016 IPR020490 Uncharacterised protein family YaiZ APECO1_RS13970 6073199c51e2b33d4b0b4ae945eaa683 102 Pfam PF05449 Putative 3TM holin, Phage_holin_3 12 94 4.1E-28 T 22-04-2016 IPR008473 Putative 3TM holin, Phage holin 3 APECO1_RS21865 e925caf9b7cc99d69f0fc28044c14b51 286 Pfam PF11392 Protein of unknown function (DUF2877) 168 278 2.2E-28 T 22-04-2016 IPR021530 Protein of unknown function DUF2877 APECO1_RS04505 87b2bbc7040129898ea2056be9d8ad1c 93 Pfam PF04550 Phage holin family 2 1 86 1.5E-37 T 22-04-2016 IPR007633 Bacteriophage P2, GpY, holin APECO1_RS04505 87b2bbc7040129898ea2056be9d8ad1c 93 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 88 3.0E-41 T 22-04-2016 IPR007633 Bacteriophage P2, GpY, holin APECO1_RS23965 aeef9b7fa4dfa8ebd515ea1ece6d004d 270 Gene3D G3DSA:3.30.420.10 97 256 8.5E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS23965 aeef9b7fa4dfa8ebd515ea1ece6d004d 270 Pfam PF00665 Integrase core domain 104 217 2.5E-35 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APECO1_RS23965 aeef9b7fa4dfa8ebd515ea1ece6d004d 270 PANTHER PTHR32552 1 270 3.4E-73 T 22-04-2016 APECO1_RS23965 aeef9b7fa4dfa8ebd515ea1ece6d004d 270 Pfam PF13276 HTH-like domain 23 76 3.6E-12 T 22-04-2016 IPR025948 HTH-like domain APECO1_RS23965 aeef9b7fa4dfa8ebd515ea1ece6d004d 270 SUPERFAMILY SSF53098 96 260 3.67E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS10865 171faab04f4aef969688058e1cf2a473 267 Pfam PF00975 Thioesterase domain 20 249 9.1E-67 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 APECO1_RS10865 171faab04f4aef969688058e1cf2a473 267 PANTHER PTHR11487 2 258 1.8E-122 T 22-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 APECO1_RS10865 171faab04f4aef969688058e1cf2a473 267 PANTHER PTHR11487:SF3 2 258 1.8E-122 T 22-04-2016 APECO1_RS10865 171faab04f4aef969688058e1cf2a473 267 Gene3D G3DSA:3.40.50.1820 8 126 3.3E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS10865 171faab04f4aef969688058e1cf2a473 267 Gene3D G3DSA:3.40.50.1820 180 239 3.3E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS10865 171faab04f4aef969688058e1cf2a473 267 SUPERFAMILY SSF53474 9 246 1.88E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS17865 48431475e42f21c37256231bc3cac66f 207 PANTHER PTHR33169:SF2 49 207 1.3E-46 T 22-04-2016 APECO1_RS17865 48431475e42f21c37256231bc3cac66f 207 Pfam PF03551 Transcriptional regulator PadR-like family 67 136 6.7E-16 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal APECO1_RS17865 48431475e42f21c37256231bc3cac66f 207 SUPERFAMILY SSF46785 63 180 3.81E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17865 48431475e42f21c37256231bc3cac66f 207 Gene3D G3DSA:1.10.10.10 51 151 1.6E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17865 48431475e42f21c37256231bc3cac66f 207 PANTHER PTHR33169 49 207 1.3E-46 T 22-04-2016 APECO1_RS17310 d878d9aad6b4b178018b5841f2e348c7 304 Gene3D G3DSA:3.40.50.720 2 211 1.4E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17310 d878d9aad6b4b178018b5841f2e348c7 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 198 7.4E-22 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APECO1_RS17310 d878d9aad6b4b178018b5841f2e348c7 304 PANTHER PTHR10366:SF466 4 241 5.3E-39 T 22-04-2016 APECO1_RS17310 d878d9aad6b4b178018b5841f2e348c7 304 PANTHER PTHR10366:SF466 266 301 5.3E-39 T 22-04-2016 APECO1_RS17310 d878d9aad6b4b178018b5841f2e348c7 304 SUPERFAMILY SSF51735 268 300 1.24E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17310 d878d9aad6b4b178018b5841f2e348c7 304 SUPERFAMILY SSF51735 1 241 1.24E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS17310 d878d9aad6b4b178018b5841f2e348c7 304 PANTHER PTHR10366 4 241 5.3E-39 T 22-04-2016 APECO1_RS17310 d878d9aad6b4b178018b5841f2e348c7 304 PANTHER PTHR10366 266 301 5.3E-39 T 22-04-2016 APECO1_RS16440 34b09452eb28106e216dccd5389dd976 135 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 131 3.0E-58 T 22-04-2016 IPR009883 Toxin CptA APECO1_RS16440 34b09452eb28106e216dccd5389dd976 135 PIRSF PIRSF020653 1 135 6.2E-79 T 22-04-2016 IPR009883 Toxin CptA APECO1_RS16440 34b09452eb28106e216dccd5389dd976 135 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 129 7.3E-56 T 22-04-2016 IPR009883 Toxin CptA APECO1_RS25390 76172bcec0507694c2cbb4336f25798f 502 Pfam PF05136 Phage portal protein, lambda family 35 372 2.0E-80 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APECO1_RS25390 76172bcec0507694c2cbb4336f25798f 502 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 31 476 2.6E-137 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.30.460.10 194 340 4.4E-50 T 22-04-2016 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.10.20.30 406 467 5.9E-26 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 Pfam PF13328 HD domain 44 191 3.6E-40 T 22-04-2016 IPR003607 HD/PDEase domain APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 Pfam PF02824 TGS domain 406 465 2.6E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF109604 27 207 3.77E-45 T 22-04-2016 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 Gene3D G3DSA:3.30.70.260 664 739 8.2E-29 T 22-04-2016 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.8E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 SMART SM00954 251 361 8.7E-66 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF81271 399 465 5.07E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 PANTHER PTHR21262:SF5 55 743 0.0 T 22-04-2016 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 PANTHER PTHR21262 55 743 0.0 T 22-04-2016 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 739 2.1E-186 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF55021 665 741 1.76E-14 T 22-04-2016 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 Pfam PF13291 ACT domain 664 740 6.7E-18 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APECO1_RS15795 49ff6fc65ed111112ee76be427a82132 744 SUPERFAMILY SSF81301 196 410 1.41E-63 T 22-04-2016 APECO1_RS23955 4ea05223860be2693325e2f68d38c499 442 SUPERFAMILY SSF81301 1 171 2.62E-25 T 22-04-2016 APECO1_RS23955 4ea05223860be2693325e2f68d38c499 442 Gene3D G3DSA:3.30.460.10 13 101 3.8E-5 T 22-04-2016 APECO1_RS05305 59f5f7b6e786e367c7f6ab9b20260df6 124 Pfam PF13984 MsyB protein 3 124 7.3E-64 T 22-04-2016 IPR025729 MsyB protein APECO1_RS14970 0ebd36f0bef7e0681aff5a150a14710a 216 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 20 159 4.6E-47 T 22-04-2016 IPR006433 Prohead protease APECO1_RS14970 0ebd36f0bef7e0681aff5a150a14710a 216 Pfam PF04586 Caudovirus prohead serine protease 12 160 7.3E-34 T 22-04-2016 IPR006433 Prohead protease APECO1_RS14970 0ebd36f0bef7e0681aff5a150a14710a 216 SUPERFAMILY SSF50789 24 145 2.11E-5 T 22-04-2016 APECO1_RS01335 51b0256e87698131e2c787d9ea87efb1 124 Gene3D G3DSA:3.40.630.30 2 121 1.1E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS01335 51b0256e87698131e2c787d9ea87efb1 124 SUPERFAMILY SSF55729 4 120 1.01E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS01335 51b0256e87698131e2c787d9ea87efb1 124 PANTHER PTHR21471 51 122 3.0E-12 T 22-04-2016 APECO1_RS01335 51b0256e87698131e2c787d9ea87efb1 124 Pfam PF13673 Acetyltransferase (GNAT) domain 5 115 1.5E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS09730 48ceeff369173479995acd1316efe884 283 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 11 281 3.0E-150 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 APECO1_RS09730 48ceeff369173479995acd1316efe884 283 PANTHER PTHR32502:SF5 4 283 2.2E-183 T 22-04-2016 APECO1_RS09730 48ceeff369173479995acd1316efe884 283 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 281 2.5E-111 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APECO1_RS09730 48ceeff369173479995acd1316efe884 283 PANTHER PTHR32502 4 283 2.2E-183 T 22-04-2016 APECO1_RS17595 759acf9dbffaf4285c8bb444750738eb 159 PANTHER PTHR34319 1 159 3.5E-58 T 22-04-2016 APECO1_RS17595 759acf9dbffaf4285c8bb444750738eb 159 SUPERFAMILY SSF141452 4 157 2.75E-32 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS17595 759acf9dbffaf4285c8bb444750738eb 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 157 5.2E-59 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS17595 759acf9dbffaf4285c8bb444750738eb 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 143 1.9E-18 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS17595 759acf9dbffaf4285c8bb444750738eb 159 Gene3D G3DSA:2.30.110.20 1 150 8.8E-18 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APECO1_RS05785 e38481d070a096398481af5d2b1c1263 226 Gene3D G3DSA:3.90.320.10 5 225 1.6E-77 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 APECO1_RS05785 e38481d070a096398481af5d2b1c1263 226 Pfam PF09588 YqaJ-like viral recombinase domain 24 166 2.4E-24 T 22-04-2016 IPR019080 YqaJ viral recombinase APECO1_RS05785 e38481d070a096398481af5d2b1c1263 226 SUPERFAMILY SSF52980 5 225 1.07E-67 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APECO1_RS14345 ecad0a2b61665c6066ff039f2211b326 128 Gene3D G3DSA:3.90.1010.10 2 126 1.0E-57 T 22-04-2016 APECO1_RS14345 ecad0a2b61665c6066ff039f2211b326 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 5.3E-72 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 APECO1_RS14345 ecad0a2b61665c6066ff039f2211b326 128 PANTHER PTHR10093 1 128 2.1E-105 T 22-04-2016 APECO1_RS14345 ecad0a2b61665c6066ff039f2211b326 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.0E-57 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 APECO1_RS14345 ecad0a2b61665c6066ff039f2211b326 128 SUPERFAMILY SSF82649 1 125 1.2E-49 T 22-04-2016 APECO1_RS14345 ecad0a2b61665c6066ff039f2211b326 128 PANTHER PTHR10093:SF3 1 128 2.1E-105 T 22-04-2016 APECO1_RS11825 819bdf5d8e4c4421a139dc25920dfb59 93 Pfam PF10836 Protein of unknown function (DUF2574) 1 93 1.4E-51 T 22-04-2016 IPR020386 Uncharacterised protein family YehE APECO1_RS11825 819bdf5d8e4c4421a139dc25920dfb59 93 ProDom PD064930 YEHE MEMBRANE OUTER STY2382 PRECURSOR ECS2918 SIGNAL 1 83 2.0E-44 T 22-04-2016 IPR020386 Uncharacterised protein family YehE APECO1_RS21550 b63e4245d160fcc7f6b7312b4a6d5e51 348 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 8 347 57.637 T 22-04-2016 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 UniPathway: UPA00566 APECO1_RS21550 b63e4245d160fcc7f6b7312b4a6d5e51 348 Gene3D G3DSA:3.30.1890.10 54 221 1.4E-93 T 22-04-2016 APECO1_RS21550 b63e4245d160fcc7f6b7312b4a6d5e51 348 Gene3D G3DSA:3.30.1890.10 257 318 1.4E-93 T 22-04-2016 APECO1_RS21550 b63e4245d160fcc7f6b7312b4a6d5e51 348 PANTHER PTHR32309:SF16 1 348 7.6E-273 T 22-04-2016 APECO1_RS21550 b63e4245d160fcc7f6b7312b4a6d5e51 348 Pfam PF02706 Chain length determinant protein 15 180 1.2E-14 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APECO1_RS21550 b63e4245d160fcc7f6b7312b4a6d5e51 348 PANTHER PTHR32309 1 348 7.6E-273 T 22-04-2016 APECO1_RS21550 b63e4245d160fcc7f6b7312b4a6d5e51 348 SUPERFAMILY SSF160355 54 318 7.59E-88 T 22-04-2016 APECO1_RS23255 bc884a9dac79d3b391163523dd6611df 549 Pfam PF00999 Sodium/hydrogen exchanger family 7 421 5.4E-78 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APECO1_RS23255 bc884a9dac79d3b391163523dd6611df 549 PANTHER PTHR10110:SF120 1 539 1.8E-215 T 22-04-2016 APECO1_RS23255 bc884a9dac79d3b391163523dd6611df 549 PANTHER PTHR10110 1 539 1.8E-215 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 APECO1_RS23255 bc884a9dac79d3b391163523dd6611df 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 1.4E-255 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 APECO1_RS23650 2570cb8316ae4b95c2b5d701a994e9e2 444 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 2 443 4.9E-147 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 APECO1_RS23650 2570cb8316ae4b95c2b5d701a994e9e2 444 PANTHER PTHR11785 1 440 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS23650 2570cb8316ae4b95c2b5d701a994e9e2 444 Pfam PF13520 Amino acid permease 7 416 1.7E-37 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS23650 2570cb8316ae4b95c2b5d701a994e9e2 444 PIRSF PIRSF006060 2 441 5.2E-49 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS23650 2570cb8316ae4b95c2b5d701a994e9e2 444 PANTHER PTHR11785:SF332 1 440 0.0 T 22-04-2016 APECO1_RS16895 97af7ca8ddae41ed2c1c17c75b6ce7a6 77 SUPERFAMILY SSF46785 6 66 1.17E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS16895 97af7ca8ddae41ed2c1c17c75b6ce7a6 77 Pfam PF04703 FaeA-like protein 5 64 5.9E-30 T 22-04-2016 IPR006793 FaeA-like protein GO:0006355|GO:0009289 APECO1_RS16895 97af7ca8ddae41ed2c1c17c75b6ce7a6 77 Gene3D G3DSA:1.10.10.10 1 70 1.0E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS16895 97af7ca8ddae41ed2c1c17c75b6ce7a6 77 ProDom PD007170 TRANSCRIPTION REGULATORY REGULATION FIMBRIA FIMBRIAL PLASMID ACTIVATOR PAPI OPERON PEFI 5 61 9.0E-28 T 22-04-2016 IPR006793 FaeA-like protein GO:0006355|GO:0009289 APECO1_RS19000 98f615537815942b22a86925403a8f47 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.942 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19000 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1490.10 74 129 4.2E-28 T 22-04-2016 APECO1_RS19000 98f615537815942b22a86925403a8f47 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19000 98f615537815942b22a86925403a8f47 130 SUPERFAMILY SSF56047 5 129 4.97E-46 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19000 98f615537815942b22a86925403a8f47 130 PANTHER PTHR11758 1 130 3.4E-64 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19000 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1370.30 2 72 2.3E-28 T 22-04-2016 APECO1_RS19000 98f615537815942b22a86925403a8f47 130 Pfam PF00410 Ribosomal protein S8 5 129 4.8E-49 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APECO1_RS19370 35c84ec31c558eed4a8a7fb3be1d6025 301 Pfam PF14502 Helix-turn-helix domain 24 71 5.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19370 35c84ec31c558eed4a8a7fb3be1d6025 301 Gene3D G3DSA:1.10.10.10 25 75 5.4E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS19370 35c84ec31c558eed4a8a7fb3be1d6025 301 SUPERFAMILY SSF53850 74 301 1.96E-82 T 22-04-2016 APECO1_RS19370 35c84ec31c558eed4a8a7fb3be1d6025 301 Gene3D G3DSA:3.40.190.10 205 283 9.8E-4 T 22-04-2016 APECO1_RS19370 35c84ec31c558eed4a8a7fb3be1d6025 301 Pfam PF14503 YhfZ C-terminal domain 75 301 7.4E-85 T 22-04-2016 IPR032791 Uncharacterised protein YhfZ, C-terminal domain APECO1_RS19370 35c84ec31c558eed4a8a7fb3be1d6025 301 Gene3D G3DSA:3.40.190.10 76 204 3.1E-66 T 22-04-2016 APECO1_RS15860 fe42cfca8432ab930e60f20578f9fe21 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 1.1E-186 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 APECO1_RS15860 fe42cfca8432ab930e60f20578f9fe21 429 PANTHER PTHR35334:SF2 1 429 0.0 T 22-04-2016 APECO1_RS15860 fe42cfca8432ab930e60f20578f9fe21 429 PANTHER PTHR35334 1 429 0.0 T 22-04-2016 APECO1_RS20865 3ff4cae3eab8617935adc1d51c352d85 463 PANTHER PTHR11119:SF44 1 463 1.3E-288 T 22-04-2016 APECO1_RS20865 3ff4cae3eab8617935adc1d51c352d85 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 7.3E-143 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS20865 3ff4cae3eab8617935adc1d51c352d85 463 Pfam PF00860 Permease family 34 426 1.8E-112 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS20865 3ff4cae3eab8617935adc1d51c352d85 463 PANTHER PTHR11119 1 463 1.3E-288 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APECO1_RS20865 3ff4cae3eab8617935adc1d51c352d85 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APECO1_RS01970 2990862072e39b1733ed4503093023ad 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.325 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 APECO1_RS01970 2990862072e39b1733ed4503093023ad 152 PANTHER PTHR35146 1 152 6.9E-62 T 22-04-2016 APECO1_RS01970 2990862072e39b1733ed4503093023ad 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 143 7.7E-49 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 APECO1_RS01970 2990862072e39b1733ed4503093023ad 152 PANTHER PTHR35146:SF1 1 152 6.9E-62 T 22-04-2016 APECO1_RS09260 da3daa51a2984ce7d67c94899b5b748c 178 Pfam PF14002 YniB-like protein 15 177 5.6E-77 T 22-04-2016 IPR025229 YniB-like protein APECO1_RS09260 da3daa51a2984ce7d67c94899b5b748c 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 2.0E-99 T 22-04-2016 APECO1_RS08785 483fe42a41dafe63f84b2304972ec5a1 286 PANTHER PTHR10534 1 286 4.9E-145 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS08785 483fe42a41dafe63f84b2304972ec5a1 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 7.2E-146 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS08785 483fe42a41dafe63f84b2304972ec5a1 286 Pfam PF08543 Phosphomethylpyrimidine kinase 67 255 1.1E-15 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APECO1_RS08785 483fe42a41dafe63f84b2304972ec5a1 286 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 1 286 54.491 T 22-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APECO1_RS08785 483fe42a41dafe63f84b2304972ec5a1 286 Gene3D G3DSA:3.40.1190.20 1 285 6.8E-89 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS08785 483fe42a41dafe63f84b2304972ec5a1 286 SUPERFAMILY SSF53613 1 280 3.43E-77 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS08785 483fe42a41dafe63f84b2304972ec5a1 286 PANTHER PTHR10534:SF0 1 286 4.9E-145 T 22-04-2016 APECO1_RS07470 baa3796c26be35248211e66a3aa548bf 866 Pfam PF06630 Enterobacterial exodeoxyribonuclease VIII 2 178 1.5E-85 T 22-04-2016 IPR010584 Exodeoxyribonuclease 8 GO:0051908|GO:0090305 APECO1_RS07470 baa3796c26be35248211e66a3aa548bf 866 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 615 850 2.7E-33 T 22-04-2016 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain APECO1_RS06190 8caa558786cf6eb2a654ed44541e2b96 114 Pfam PF13436 Glycine-zipper domain 25 61 0.034 T 22-04-2016 IPR025693 Glycine-zipper-containing OmpA-like membrane domain APECO1_RS06190 8caa558786cf6eb2a654ed44541e2b96 114 Pfam PF13488 Glycine zipper 74 113 4.3E-5 T 22-04-2016 APECO1_RS06190 8caa558786cf6eb2a654ed44541e2b96 114 Hamap MF_01455 UPF0757 protein YmgG [ymgG]. 1 114 27.322 T 22-04-2016 IPR022833 Uncharacterised protein family UPF0757, YmgG APECO1_RS23290 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Gene3D G3DSA:1.10.710.10 82 312 1.8E-18 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APECO1_RS23290 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 PANTHER PTHR30633 1 478 8.2E-164 T 22-04-2016 APECO1_RS23290 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 SUPERFAMILY SSF48695 38 472 2.4E-163 T 22-04-2016 IPR011031 Multihaem cytochrome APECO1_RS23290 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 477 59.288 T 22-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APECO1_RS23290 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Pfam PF02335 Cytochrome c552 43 472 3.9E-177 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APECO1_RS23290 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 Gene3D G3DSA:1.20.140.10 313 445 1.8E-56 T 22-04-2016 APECO1_RS23290 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 38 475 3.8E-249 T 22-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APECO1_RS23290 b7ff356d8fcb2c0199be8dbb4aa34dfb 478 PIRSF PIRSF000243 22 478 3.1E-126 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APECO1_RS09830 5bff90af6815e1bc33556196ce21148c 78 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 1 78 6.0E-41 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 APECO1_RS09830 5bff90af6815e1bc33556196ce21148c 78 Pfam PF07351 Protein of unknown function (DUF1480) 2 77 1.4E-37 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 APECO1_RS06915 c67fd1f5184677aac921a2209da3bc19 199 SUPERFAMILY SSF54001 53 181 1.52E-17 T 22-04-2016 APECO1_RS06915 c67fd1f5184677aac921a2209da3bc19 199 SUPERFAMILY SSF102712 3 49 9.55E-9 T 22-04-2016 APECO1_RS06915 c67fd1f5184677aac921a2209da3bc19 199 PANTHER PTHR34858 1 182 7.1E-54 T 22-04-2016 APECO1_RS06915 c67fd1f5184677aac921a2209da3bc19 199 Gene3D G3DSA:3.90.1720.10 68 181 3.5E-17 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS06915 c67fd1f5184677aac921a2209da3bc19 199 PANTHER PTHR34858:SF1 1 182 7.1E-54 T 22-04-2016 APECO1_RS06915 c67fd1f5184677aac921a2209da3bc19 199 Gene3D G3DSA:3.40.140.10 10 67 3.5E-8 T 22-04-2016 APECO1_RS06915 c67fd1f5184677aac921a2209da3bc19 199 Pfam PF00877 NlpC/P60 family 63 175 8.0E-14 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APECO1_RS20415 ae78c0ac118f3e4745472066d8ce6668 99 Pfam PF13983 YsaB-like lipoprotein 25 99 4.8E-42 T 22-04-2016 IPR025728 YsaB-like lipoprotein APECO1_RS01360 8ee6fc5d16f2a193764856fdbd13598d 414 SUPERFAMILY SSF53474 46 413 3.36E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS01360 8ee6fc5d16f2a193764856fdbd13598d 414 Hamap MF_01063 Esterase FrsA [frsA]. 1 414 65.141 T 22-04-2016 IPR010520 UPF0255 family APECO1_RS01360 8ee6fc5d16f2a193764856fdbd13598d 414 Gene3D G3DSA:3.40.50.1820 346 412 1.5E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS01360 8ee6fc5d16f2a193764856fdbd13598d 414 Gene3D G3DSA:3.40.50.1820 157 301 1.5E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APECO1_RS01360 8ee6fc5d16f2a193764856fdbd13598d 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 3.6E-222 T 22-04-2016 IPR010520 UPF0255 family APECO1_RS05365 6f259138602043a6e267b4c0031e2b2e 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 1.1E-55 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 APECO1_RS24485 a401a7c8881a30c99ae26d947e0ac3fd 470 PIRSF PIRSF006060 1 469 6.5E-69 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS24485 a401a7c8881a30c99ae26d947e0ac3fd 470 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APECO1_RS24485 a401a7c8881a30c99ae26d947e0ac3fd 470 PANTHER PTHR11785:SF336 1 464 1.7E-221 T 22-04-2016 APECO1_RS24485 a401a7c8881a30c99ae26d947e0ac3fd 470 Pfam PF00324 Amino acid permease 27 468 8.9E-123 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APECO1_RS24485 a401a7c8881a30c99ae26d947e0ac3fd 470 PANTHER PTHR11785 1 464 1.7E-221 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS01045 25bc5427187e7d2ee18696f72a0d9ede 217 SUPERFAMILY SSF161098 9 201 2.49E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS01045 25bc5427187e7d2ee18696f72a0d9ede 217 PANTHER PTHR30450:SF1 1 217 7.5E-122 T 22-04-2016 APECO1_RS01045 25bc5427187e7d2ee18696f72a0d9ede 217 Gene3D G3DSA:1.10.3720.10 9 214 7.6E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS01045 25bc5427187e7d2ee18696f72a0d9ede 217 PANTHER PTHR30450 1 217 7.5E-122 T 22-04-2016 APECO1_RS01045 25bc5427187e7d2ee18696f72a0d9ede 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 216 9.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS08105 965bf3bf84fa1b93fd2a1ccd72483b78 54 Gene3D G3DSA:3.40.630.30 4 51 1.3E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS08105 965bf3bf84fa1b93fd2a1ccd72483b78 54 SUPERFAMILY SSF55729 8 52 4.38E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS23270 b0e70b13940d1ff7251abe7cf82d03e1 229 PANTHER PTHR30249 1 229 1.6E-135 T 22-04-2016 APECO1_RS23270 b0e70b13940d1ff7251abe7cf82d03e1 229 PANTHER PTHR30249:SF4 1 229 1.6E-135 T 22-04-2016 APECO1_RS23270 b0e70b13940d1ff7251abe7cf82d03e1 229 Pfam PF04172 LrgB-like family 14 226 4.6E-67 T 22-04-2016 IPR007300 CidB/LrgB family APECO1_RS16800 7d6f010c8c10554057205cd5cac0e02f 235 PANTHER PTHR36111 2 235 2.1E-184 T 22-04-2016 APECO1_RS16800 7d6f010c8c10554057205cd5cac0e02f 235 PANTHER PTHR36111:SF1 2 235 2.1E-184 T 22-04-2016 APECO1_RS16800 7d6f010c8c10554057205cd5cac0e02f 235 Pfam PF04474 Protein of unknown function (DUF554) 3 227 2.2E-68 T 22-04-2016 IPR007563 Protein of unknown function DUF554 APECO1_RS12590 da1ddeccdbe6d91eaa602d9555388ea7 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 125 20.415 T 22-04-2016 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF UniPathway: UPA00030 APECO1_RS12590 da1ddeccdbe6d91eaa602d9555388ea7 128 SUPERFAMILY SSF103481 42 124 2.35E-5 T 22-04-2016 APECO1_RS14995 2bc3d26c5b0a9b00e10a808a481529f4 116 Pfam PF01844 HNH endonuclease 66 112 4.2E-14 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 APECO1_RS14995 2bc3d26c5b0a9b00e10a808a481529f4 116 PANTHER PTHR41286:SF1 7 116 1.4E-12 T 22-04-2016 APECO1_RS14995 2bc3d26c5b0a9b00e10a808a481529f4 116 PANTHER PTHR41286 7 116 1.4E-12 T 22-04-2016 APECO1_RS14995 2bc3d26c5b0a9b00e10a808a481529f4 116 SMART SM00507 53 107 1.4E-8 T 22-04-2016 IPR003615 HNH nuclease APECO1_RS02015 9c08165600fac8a9c4b7bdf4f6f9244f 394 PANTHER PTHR23501 1 391 2.0E-155 T 22-04-2016 APECO1_RS02015 9c08165600fac8a9c4b7bdf4f6f9244f 394 PANTHER PTHR23501:SF16 1 391 2.0E-155 T 22-04-2016 APECO1_RS02015 9c08165600fac8a9c4b7bdf4f6f9244f 394 Pfam PF07690 Major Facilitator Superfamily 8 327 2.8E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS02015 9c08165600fac8a9c4b7bdf4f6f9244f 394 SUPERFAMILY SSF103473 3 382 5.23E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS02015 9c08165600fac8a9c4b7bdf4f6f9244f 394 Gene3D G3DSA:1.20.1250.20 191 383 1.3E-12 T 22-04-2016 APECO1_RS02015 9c08165600fac8a9c4b7bdf4f6f9244f 394 Gene3D G3DSA:1.20.1250.20 3 188 6.4E-25 T 22-04-2016 APECO1_RS14200 fd19e4ddf522b9ee180306831cb060bd 99 Pfam PF06069 PerC transcriptional activator 35 80 5.8E-7 T 22-04-2016 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 APECO1_RS14185 c8b46e6af3193d21e1da9921f2023bc1 299 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 10 154 1.6E-25 T 22-04-2016 IPR017482 Putative phage-type endonuclease APECO1_RS14185 c8b46e6af3193d21e1da9921f2023bc1 299 SUPERFAMILY SSF52980 10 188 1.23E-28 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APECO1_RS14185 c8b46e6af3193d21e1da9921f2023bc1 299 Pfam PF09588 YqaJ-like viral recombinase domain 10 143 2.4E-16 T 22-04-2016 IPR019080 YqaJ viral recombinase APECO1_RS14185 c8b46e6af3193d21e1da9921f2023bc1 299 Gene3D G3DSA:3.90.320.10 10 184 2.7E-25 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 APECO1_RS06750 a77c1d2c5533c31f65bcc0cb19290a7c 273 SUPERFAMILY SSF57938 169 220 1.14E-6 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS06750 a77c1d2c5533c31f65bcc0cb19290a7c 273 Pfam PF03589 Antitermination protein 178 265 2.2E-27 T 22-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 APECO1_RS06750 a77c1d2c5533c31f65bcc0cb19290a7c 273 Pfam PF03589 Antitermination protein 24 111 2.8E-20 T 22-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 APECO1_RS06750 a77c1d2c5533c31f65bcc0cb19290a7c 273 Gene3D G3DSA:2.10.230.10 110 130 3.4E-8 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS06750 a77c1d2c5533c31f65bcc0cb19290a7c 273 Gene3D G3DSA:2.10.230.10 163 193 3.4E-8 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APECO1_RS19645 838205352281ee3792f39070eaba1e18 477 PANTHER PTHR12526 1 476 5.2E-157 T 22-04-2016 APECO1_RS19645 838205352281ee3792f39070eaba1e18 477 PANTHER PTHR12526:SF17 1 476 5.2E-157 T 22-04-2016 APECO1_RS19645 838205352281ee3792f39070eaba1e18 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 47.143 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS19645 838205352281ee3792f39070eaba1e18 477 SUPERFAMILY SSF53756 5 476 5.58E-117 T 22-04-2016 APECO1_RS19645 838205352281ee3792f39070eaba1e18 477 Pfam PF00534 Glycosyl transferases group 1 288 438 1.9E-12 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APECO1_RS19645 838205352281ee3792f39070eaba1e18 477 Gene3D G3DSA:3.40.50.2000 251 457 5.7E-70 T 22-04-2016 APECO1_RS19645 838205352281ee3792f39070eaba1e18 477 Pfam PF08323 Starch synthase catalytic domain 2 233 1.3E-71 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS19645 838205352281ee3792f39070eaba1e18 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 1.7E-176 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APECO1_RS14805 be51575c69b8dfe56250760261b203c3 553 SUPERFAMILY SSF52540 4 50 2.77E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14805 be51575c69b8dfe56250760261b203c3 553 SUPERFAMILY SSF52540 284 507 2.77E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14805 be51575c69b8dfe56250760261b203c3 553 Gene3D G3DSA:3.40.50.300 1 206 5.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14805 be51575c69b8dfe56250760261b203c3 553 Gene3D G3DSA:3.40.50.300 431 496 1.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14805 be51575c69b8dfe56250760261b203c3 553 SUPERFAMILY SSF52540 1 217 2.13E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS14805 be51575c69b8dfe56250760261b203c3 553 PIRSF PIRSF003128 1 553 2.9E-158 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APECO1_RS14805 be51575c69b8dfe56250760261b203c3 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.3E-173 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APECO1_RS14805 be51575c69b8dfe56250760261b203c3 553 PANTHER PTHR11059 2 553 2.7E-188 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APECO1_RS14805 be51575c69b8dfe56250760261b203c3 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 511 1.2E-18 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APECO1_RS24990 7cbd5b2fcab772bec69158cce8668da0 153 Pfam PF07670 Nucleoside recognition 27 90 6.6E-9 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS24325 1f13ff1ca2c87b3107658b93a77cacc4 132 PANTHER PTHR40043 1 132 3.1E-55 T 22-04-2016 APECO1_RS24325 1f13ff1ca2c87b3107658b93a77cacc4 132 Pfam PF03994 Domain of Unknown Function (DUF350) 13 65 2.2E-12 T 22-04-2016 IPR007140 Protein of unknown function DUF350 APECO1_RS24325 1f13ff1ca2c87b3107658b93a77cacc4 132 Pfam PF03994 Domain of Unknown Function (DUF350) 78 130 4.1E-7 T 22-04-2016 IPR007140 Protein of unknown function DUF350 APECO1_RS24325 1f13ff1ca2c87b3107658b93a77cacc4 132 PANTHER PTHR40043:SF1 1 132 3.1E-55 T 22-04-2016 APECO1_RS19295 502a128493993757be1b0c8f4431232e 55 Pfam PF10832 Protein of unknown function (DUF2559) 2 55 3.9E-31 T 22-04-2016 IPR022541 Protein of unknown function DUF2559 APECO1_RS19295 502a128493993757be1b0c8f4431232e 55 ProDom PD026929 YHFG 1 55 2.0E-14 T 22-04-2016 IPR022541 Protein of unknown function DUF2559 APECO1_RS10295 17485a0952b974dc67a3569f61055394 137 Pfam PF13987 YedD-like protein 25 129 1.7E-54 T 22-04-2016 IPR025596 YedD-like protein APECO1_RS14075 70e07dbce20e2e8a35b3d20c7cff46b7 559 Pfam PF12236 Bacteriophage head to tail connecting protein 15 499 6.0E-171 T 22-04-2016 IPR020991 Head-to-tail joining protein, podovirus-type APECO1_RS13675 5f7cee22a4a18282a6d9fb951d785695 149 Pfam PF11143 Protein of unknown function (DUF2919) 8 145 2.7E-48 T 22-04-2016 IPR021318 Protein of unknown function DUF2919 APECO1_RS13160 5473e0ae2b98fa089a2d1732fadcee8a 158 SUPERFAMILY SSF53955 2 152 2.64E-54 T 22-04-2016 IPR023346 Lysozyme-like domain APECO1_RS13160 5473e0ae2b98fa089a2d1732fadcee8a 158 Pfam PF00959 Phage lysozyme 33 140 3.5E-23 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APECO1_RS13160 5473e0ae2b98fa089a2d1732fadcee8a 158 Gene3D G3DSA:1.10.530.10 2 156 1.7E-68 T 22-04-2016 APECO1_RS10180 81b5dc60a40f17ff8d057986760c72c8 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 1.6E-36 T 22-04-2016 IPR019620 Putative metal-binding protein APECO1_RS10180 81b5dc60a40f17ff8d057986760c72c8 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 9.0E-36 T 22-04-2016 IPR019620 Putative metal-binding protein APECO1_RS07950 0ff3b12e305b5d1121463af809f21ff9 330 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 9 312 7.1E-112 T 22-04-2016 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 APECO1_RS07950 0ff3b12e305b5d1121463af809f21ff9 330 PANTHER PTHR37955:SF1 1 329 2.3E-108 T 22-04-2016 APECO1_RS07950 0ff3b12e305b5d1121463af809f21ff9 330 Pfam PF03595 Voltage-dependent anion channel 8 305 6.1E-39 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 APECO1_RS07950 0ff3b12e305b5d1121463af809f21ff9 330 PANTHER PTHR37955 1 329 2.3E-108 T 22-04-2016 APECO1_RS07950 0ff3b12e305b5d1121463af809f21ff9 330 Gene3D G3DSA:1.10.3860.10 46 121 2.6E-4 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APECO1_RS19465 989a41ff6d0c0d415be30a1f7d731843 574 Pfam PF13687 Domain of unknown function (DUF4153) 150 389 4.5E-44 T 22-04-2016 IPR025291 Protein of unknown function DUF4153 APECO1_RS22800 879ad00cedf9a671b268009d65d7016e 223 PANTHER PTHR28511:SF1 3 223 3.2E-90 T 22-04-2016 APECO1_RS22800 879ad00cedf9a671b268009d65d7016e 223 PANTHER PTHR28511 3 223 3.2E-90 T 22-04-2016 APECO1_RS22800 879ad00cedf9a671b268009d65d7016e 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 35.446 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 APECO1_RS22800 879ad00cedf9a671b268009d65d7016e 223 Pfam PF04493 Endonuclease V 12 206 2.8E-73 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 Gene3D G3DSA:3.30.70.20 87 155 8.8E-10 T 22-04-2016 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 Gene3D G3DSA:3.30.70.20 5 55 1.0E-22 T 22-04-2016 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 Gene3D G3DSA:3.30.70.20 156 189 1.0E-22 T 22-04-2016 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 PANTHER PTHR11938:SF111 133 164 2.9E-39 T 22-04-2016 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 PANTHER PTHR11938:SF111 1 101 2.9E-39 T 22-04-2016 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 PANTHER PTHR11938 1 101 2.9E-39 T 22-04-2016 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 Pfam PF13247 4Fe-4S dicluster domain 47 97 9.5E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 PANTHER PTHR11938 133 164 2.9E-39 T 22-04-2016 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 Gene3D G3DSA:3.30.70.20 56 86 3.8E-14 T 22-04-2016 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 SUPERFAMILY SSF54862 136 182 1.91E-41 T 22-04-2016 APECO1_RS15500 c43a9844695aa3fa099caaf23f5355cd 203 SUPERFAMILY SSF54862 2 101 1.91E-41 T 22-04-2016 APECO1_RS26045 4ff33804d10c16a5f048383c25eb3911 108 Pfam PF04453 Organic solvent tolerance protein 3 103 7.5E-17 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 APECO1_RS15190 85f7b0c9fa370a98ce4e235fab35e610 174 Pfam PF00581 Rhodanese-like domain 7 99 1.7E-10 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS15190 85f7b0c9fa370a98ce4e235fab35e610 174 SUPERFAMILY SSF52821 2 154 2.36E-25 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS15190 85f7b0c9fa370a98ce4e235fab35e610 174 Pfam PF11127 Protein of unknown function (DUF2892) 115 171 1.2E-10 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 APECO1_RS15190 85f7b0c9fa370a98ce4e235fab35e610 174 Gene3D G3DSA:3.40.250.10 4 107 8.5E-19 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS15190 85f7b0c9fa370a98ce4e235fab35e610 174 SMART SM00450 6 102 1.3E-15 T 22-04-2016 IPR001763 Rhodanese-like domain APECO1_RS08570 00f85a20f6f5c31b67625dda988cda67 417 PANTHER PTHR23501:SF11 6 414 5.2E-232 T 22-04-2016 APECO1_RS08570 00f85a20f6f5c31b67625dda988cda67 417 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APECO1_RS08570 00f85a20f6f5c31b67625dda988cda67 417 Gene3D G3DSA:1.20.1250.20 236 412 1.8E-17 T 22-04-2016 APECO1_RS08570 00f85a20f6f5c31b67625dda988cda67 417 Gene3D G3DSA:1.20.1250.20 36 216 2.5E-32 T 22-04-2016 APECO1_RS08570 00f85a20f6f5c31b67625dda988cda67 417 Pfam PF07690 Major Facilitator Superfamily 41 260 3.8E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APECO1_RS08570 00f85a20f6f5c31b67625dda988cda67 417 PANTHER PTHR23501 6 414 5.2E-232 T 22-04-2016 APECO1_RS08570 00f85a20f6f5c31b67625dda988cda67 417 SUPERFAMILY SSF103473 28 414 5.75E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain APECO1_RS04175 5c8582d7e6f35166b358ca79e5b5c576 162 Pfam PF10767 Protein of unknown function (DUF2593) 21 160 3.7E-63 T 22-04-2016 IPR019703 Protein of unknown function DUF2593 APECO1_RS03400 f0406faac8b1ec3e482d3820d2abdc1d 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 5.7E-9 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 APECO1_RS03400 f0406faac8b1ec3e482d3820d2abdc1d 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 7 29 2.3E-5 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 APECO1_RS01040 28a7814aeb6b097d83e34aff5982e20b 271 PANTHER PTHR30429 3 271 7.9E-160 T 22-04-2016 IPR004872 Lipoprotein NlpA family APECO1_RS01040 28a7814aeb6b097d83e34aff5982e20b 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 4.5E-153 T 22-04-2016 IPR004872 Lipoprotein NlpA family APECO1_RS01040 28a7814aeb6b097d83e34aff5982e20b 271 Pfam PF03180 NLPA lipoprotein 33 271 4.1E-101 T 22-04-2016 IPR004872 Lipoprotein NlpA family APECO1_RS01040 28a7814aeb6b097d83e34aff5982e20b 271 PIRSF PIRSF002854 1 271 6.8E-109 T 22-04-2016 IPR004872 Lipoprotein NlpA family APECO1_RS01040 28a7814aeb6b097d83e34aff5982e20b 271 PANTHER PTHR30429:SF1 3 271 7.9E-160 T 22-04-2016 APECO1_RS01040 28a7814aeb6b097d83e34aff5982e20b 271 Gene3D G3DSA:3.40.190.10 30 162 2.9E-61 T 22-04-2016 APECO1_RS01040 28a7814aeb6b097d83e34aff5982e20b 271 SUPERFAMILY SSF53850 33 271 5.31E-85 T 22-04-2016 APECO1_RS09160 1ab770e47abdf18096efee2926141cd3 478 PANTHER PTHR32057 17 478 1.5E-208 T 22-04-2016 APECO1_RS09160 1ab770e47abdf18096efee2926141cd3 478 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 450 8.2E-159 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 APECO1_RS09160 1ab770e47abdf18096efee2926141cd3 478 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 464 46.258 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 APECO1_RS03685 388b7440f751b01deb0d56ef744bb678 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 45 6.9E-29 T 22-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 APECO1_RS03685 388b7440f751b01deb0d56ef744bb678 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 19.084 T 22-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 APECO1_RS11255 cfbc741d6229fd7253f18ae834e20e5f 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.884 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APECO1_RS11255 cfbc741d6229fd7253f18ae834e20e5f 245 Gene3D G3DSA:3.20.20.70 1 243 1.4E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS11255 cfbc741d6229fd7253f18ae834e20e5f 245 PANTHER PTHR21235 1 244 5.5E-117 T 22-04-2016 APECO1_RS11255 cfbc741d6229fd7253f18ae834e20e5f 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.4E-80 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APECO1_RS11255 cfbc741d6229fd7253f18ae834e20e5f 245 Pfam PF00977 Histidine biosynthesis protein 1 234 1.2E-75 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APECO1_RS11255 cfbc741d6229fd7253f18ae834e20e5f 245 SUPERFAMILY SSF51366 1 242 1.28E-65 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APECO1_RS11255 cfbc741d6229fd7253f18ae834e20e5f 245 PANTHER PTHR21235:SF15 1 244 5.5E-117 T 22-04-2016 APECO1_RS05100 09cbe6967abdcb2b690153b72f8aed56 196 PANTHER PTHR23026:SF110 10 192 5.3E-112 T 22-04-2016 APECO1_RS05100 09cbe6967abdcb2b690153b72f8aed56 196 SUPERFAMILY SSF55469 12 193 1.44E-40 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APECO1_RS05100 09cbe6967abdcb2b690153b72f8aed56 196 Gene3D G3DSA:3.40.109.10 9 193 1.4E-41 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APECO1_RS05100 09cbe6967abdcb2b690153b72f8aed56 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.973 T 22-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 APECO1_RS05100 09cbe6967abdcb2b690153b72f8aed56 196 Pfam PF00881 Nitroreductase family 18 174 6.3E-14 T 22-04-2016 IPR029479 Nitroreductase APECO1_RS05100 09cbe6967abdcb2b690153b72f8aed56 196 PANTHER PTHR23026 10 192 5.3E-112 T 22-04-2016 APECO1_RS17985 84bbf135cc652b6ddcf842620f5a0a44 122 Pfam PF06476 Protein of unknown function (DUF1090) 11 116 1.4E-36 T 22-04-2016 IPR009468 Protein of unknown function DUF1090 APECO1_RS18655 8228d7e366b2276f7bf5069d67ec76c3 367 Pfam PF04085 rod shape-determining protein MreC 123 269 4.8E-36 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APECO1_RS18655 8228d7e366b2276f7bf5069d67ec76c3 367 PANTHER PTHR34138:SF1 1 346 8.6E-105 T 22-04-2016 APECO1_RS18655 8228d7e366b2276f7bf5069d67ec76c3 367 PANTHER PTHR34138 1 346 8.6E-105 T 22-04-2016 APECO1_RS18655 8228d7e366b2276f7bf5069d67ec76c3 367 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 284 6.8E-127 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 4.0E-254 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 Pfam PF00206 Lyase 12 342 2.3E-124 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 1.3E-34 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 1.3E-34 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 1.3E-34 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 1.3E-34 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 PANTHER PTHR11444 1 467 4.5E-255 T 22-04-2016 IPR000362 Fumarate lyase family APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 Gene3D G3DSA:1.20.200.10 139 416 1.9E-105 T 22-04-2016 APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 Gene3D G3DSA:1.10.275.10 3 138 3.2E-61 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.752 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 Gene3D G3DSA:1.10.40.30 417 462 2.4E-33 T 22-04-2016 APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 Pfam PF10415 Fumarase C C-terminus 408 461 6.6E-26 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 PANTHER PTHR11444:SF1 1 467 4.5E-255 T 22-04-2016 APECO1_RS08650 91480696f73cfbdd52693899cec76dc7 467 SUPERFAMILY SSF48557 5 459 1.57E-159 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 APECO1_RS03315 a341c114d295970881c5f8bd92756313 108 Pfam PF13982 YbfN-like lipoprotein 20 107 9.6E-49 T 22-04-2016 IPR025727 YbfN-like lipoprotein APECO1_RS01710 e825df17eccc8110d6d5f79bc0392e01 287 Pfam PF11392 Protein of unknown function (DUF2877) 167 274 7.3E-27 T 22-04-2016 IPR021530 Protein of unknown function DUF2877 APECO1_RS14505 42389b66c69d4b6314aab19100d429a3 242 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.1E-37 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APECO1_RS14505 42389b66c69d4b6314aab19100d429a3 242 Gene3D G3DSA:2.40.50.140 6 75 7.4E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS14505 42389b66c69d4b6314aab19100d429a3 242 SUPERFAMILY SSF50249 4 75 3.43E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS14505 42389b66c69d4b6314aab19100d429a3 242 PANTHER PTHR33991 1 241 9.7E-67 T 22-04-2016 APECO1_RS14505 42389b66c69d4b6314aab19100d429a3 242 Pfam PF02565 Recombination protein O C terminal 83 226 4.8E-23 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APECO1_RS14505 42389b66c69d4b6314aab19100d429a3 242 Pfam PF11967 Recombination protein O N terminal 4 76 1.3E-22 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal APECO1_RS14505 42389b66c69d4b6314aab19100d429a3 242 SUPERFAMILY SSF57863 86 165 2.59E-7 T 22-04-2016 APECO1_RS14505 42389b66c69d4b6314aab19100d429a3 242 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.143 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APECO1_RS09130 d9e506a79438e03dc9e37bdf91e7059e 548 Gene3D G3DSA:3.40.50.980 199 348 5.8E-38 T 22-04-2016 APECO1_RS09130 d9e506a79438e03dc9e37bdf91e7059e 548 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 525 3.0E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APECO1_RS09130 d9e506a79438e03dc9e37bdf91e7059e 548 Gene3D G3DSA:3.40.50.980 25 198 2.1E-33 T 22-04-2016 APECO1_RS09130 d9e506a79438e03dc9e37bdf91e7059e 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 22-04-2016 IPR020845 AMP-binding, conserved site APECO1_RS09130 d9e506a79438e03dc9e37bdf91e7059e 548 Pfam PF00501 AMP-binding enzyme 31 439 9.4E-100 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APECO1_RS09130 d9e506a79438e03dc9e37bdf91e7059e 548 SUPERFAMILY SSF56801 24 535 8.9E-143 T 22-04-2016 APECO1_RS09130 d9e506a79438e03dc9e37bdf91e7059e 548 Gene3D G3DSA:2.30.38.10 359 433 3.7E-24 T 22-04-2016 APECO1_RS09130 d9e506a79438e03dc9e37bdf91e7059e 548 PANTHER PTHR24095 31 539 3.5E-160 T 22-04-2016 APECO1_RS09130 d9e506a79438e03dc9e37bdf91e7059e 548 Gene3D G3DSA:3.30.300.30 434 533 1.1E-29 T 22-04-2016 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 PANTHER PTHR19139:SF100 10 277 4.1E-96 T 22-04-2016 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 SUPERFAMILY SSF81338 9 257 1.7E-79 T 22-04-2016 IPR023271 Aquaporin-like APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 4.7E-76 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 Pfam PF00230 Major intrinsic protein 2 251 1.7E-77 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 PANTHER PTHR19139 10 277 4.1E-96 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 184 206 6.5E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 151 169 6.5E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 9 28 6.5E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 234 254 6.5E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 85 104 6.5E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 PRINTS PR00783 Major intrinsic protein family signature 48 72 6.5E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 Gene3D G3DSA:1.20.1080.10 4 258 1.9E-86 T 22-04-2016 IPR023271 Aquaporin-like APECO1_RS22400 68d36bdf68da9f1e979bef074c6ede8a 281 ProSitePatterns PS00221 MIP family signature. 66 74 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 APECO1_RS12260 8d77f686c066c4296f8b5f002af8963f 185 PANTHER PTHR10681 1 179 2.8E-82 T 22-04-2016 APECO1_RS12260 8d77f686c066c4296f8b5f002af8963f 185 SUPERFAMILY SSF52833 46 178 3.94E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS12260 8d77f686c066c4296f8b5f002af8963f 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 1.3E-85 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 APECO1_RS12260 8d77f686c066c4296f8b5f002af8963f 185 Pfam PF08534 Redoxin 42 166 5.2E-23 T 22-04-2016 IPR013740 Redoxin GO:0016491 APECO1_RS12260 8d77f686c066c4296f8b5f002af8963f 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APECO1_RS12260 8d77f686c066c4296f8b5f002af8963f 185 Gene3D G3DSA:3.40.30.10 10 178 5.3E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS12260 8d77f686c066c4296f8b5f002af8963f 185 PANTHER PTHR10681:SF107 1 179 2.8E-82 T 22-04-2016 APECO1_RS14190 928f1e584735682b387fd238c1087ea3 340 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 12 245 5.4E-91 T 22-04-2016 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 APECO1_RS14190 928f1e584735682b387fd238c1087ea3 340 Pfam PF03837 RecT family 50 246 4.0E-59 T 22-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 APECO1_RS12910 fe55c426377d9d25b7954aaf7fc8c402 92 Pfam PF08891 YfcL protein 4 87 7.6E-35 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL APECO1_RS01295 99472ffcb58487c5aaf42e057c101ab1 246 Gene3D G3DSA:2.40.440.10 43 159 4.9E-5 T 22-04-2016 APECO1_RS01295 99472ffcb58487c5aaf42e057c101ab1 246 SUPERFAMILY SSF141523 42 159 1.83E-10 T 22-04-2016 APECO1_RS01295 99472ffcb58487c5aaf42e057c101ab1 246 PANTHER PTHR36699 6 246 1.2E-77 T 22-04-2016 APECO1_RS01295 99472ffcb58487c5aaf42e057c101ab1 246 Pfam PF03734 L,D-transpeptidase catalytic domain 45 159 2.5E-6 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APECO1_RS10635 adddc0584d0888ce395f7c9fb5970cd0 160 Pfam PF05119 Phage terminase, small subunit 49 145 2.1E-24 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family APECO1_RS10635 adddc0584d0888ce395f7c9fb5970cd0 160 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 40 148 1.4E-31 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family APECO1_RS08060 76645fbf2d2f675c4ba19772adc66e77 499 PANTHER PTHR11785 2 496 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS08060 76645fbf2d2f675c4ba19772adc66e77 499 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APECO1_RS08060 76645fbf2d2f675c4ba19772adc66e77 499 PIRSF PIRSF006060 23 490 2.3E-66 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APECO1_RS08060 76645fbf2d2f675c4ba19772adc66e77 499 PANTHER PTHR11785:SF25 2 496 0.0 T 22-04-2016 APECO1_RS08060 76645fbf2d2f675c4ba19772adc66e77 499 Pfam PF00324 Amino acid permease 35 476 1.9E-126 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APECO1_RS02180 36d939856eabb958448573a742f96596 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 4.3E-19 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 APECO1_RS02180 36d939856eabb958448573a742f96596 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 2.6E-38 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 APECO1_RS02180 36d939856eabb958448573a742f96596 109 PANTHER PTHR36835 1 109 1.1E-42 T 22-04-2016 APECO1_RS16175 9e23702219d06826b81dbc87632ba4fd 291 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 5.9E-77 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APECO1_RS16175 9e23702219d06826b81dbc87632ba4fd 291 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 287 1.4E-113 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APECO1_RS16175 9e23702219d06826b81dbc87632ba4fd 291 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APECO1_RS16175 9e23702219d06826b81dbc87632ba4fd 291 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.632 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APECO1_RS16175 9e23702219d06826b81dbc87632ba4fd 291 PANTHER PTHR30589 2 289 2.3E-134 T 22-04-2016 APECO1_RS16175 9e23702219d06826b81dbc87632ba4fd 291 PANTHER PTHR30589:SF0 2 289 2.3E-134 T 22-04-2016 APECO1_RS06510 36aab891e6bf9dfd26dccb80d2dc6348 399 SUPERFAMILY SSF53098 13 371 3.57E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS06510 36aab891e6bf9dfd26dccb80d2dc6348 399 PANTHER PTHR35404 3 398 1.1E-68 T 22-04-2016 APECO1_RS06510 36aab891e6bf9dfd26dccb80d2dc6348 399 Pfam PF01609 Transposase DDE domain 107 314 2.6E-17 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APECO1_RS12300 c2016f296eb42227d9dfe25bc81b90e6 149 Gene3D G3DSA:4.10.1020.10 62 129 5.9E-33 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain APECO1_RS12300 c2016f296eb42227d9dfe25bc81b90e6 149 SUPERFAMILY SSF48695 48 145 2.26E-40 T 22-04-2016 IPR011031 Multihaem cytochrome APECO1_RS12300 c2016f296eb42227d9dfe25bc81b90e6 149 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 142 6.3E-43 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB APECO1_RS12300 c2016f296eb42227d9dfe25bc81b90e6 149 PIRSF PIRSF006105 3 149 3.2E-54 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB APECO1_RS12300 c2016f296eb42227d9dfe25bc81b90e6 149 PANTHER PTHR38604 9 149 7.4E-71 T 22-04-2016 APECO1_RS12300 c2016f296eb42227d9dfe25bc81b90e6 149 PANTHER PTHR38604:SF1 9 149 7.4E-71 T 22-04-2016 APECO1_RS14095 4f5f265f521070ba92a9fad05bac250d 126 Pfam PF13876 Phage protein (N4 Gp49/phage Sf6 gene 66) family 20 123 2.5E-38 T 22-04-2016 IPR025915 Phage protein (N4 Gp49/phage Sf6 gene 66) family APECO1_RS10620 cd371698089edf40c56b1643bb708803 408 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 36 379 2.4E-97 T 22-04-2016 IPR006427 Phage portal protein, HK97 APECO1_RS10620 cd371698089edf40c56b1643bb708803 408 Pfam PF04860 Phage portal protein 46 373 1.6E-94 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein APECO1_RS07590 3d8f912ffb8016049f78f487d174ea2b 154 Pfam PF03245 Bacteriophage Rz lysis protein 30 153 8.8E-46 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 APECO1_RS21080 76e1dd7571a5ec6d2ff1efd480cf43d8 404 Pfam PF07676 WD40-like Beta Propeller Repeat 378 392 0.054 T 22-04-2016 IPR011659 WD40-like Beta Propeller APECO1_RS21080 76e1dd7571a5ec6d2ff1efd480cf43d8 404 Pfam PF12566 Protein of unknown function (DUF3748) 63 179 4.3E-56 T 22-04-2016 IPR022223 Protein of unknown function DUF3748 APECO1_RS21080 76e1dd7571a5ec6d2ff1efd480cf43d8 404 Gene3D G3DSA:2.120.10.30 15 145 1.9E-31 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APECO1_RS21080 76e1dd7571a5ec6d2ff1efd480cf43d8 404 Gene3D G3DSA:2.120.10.30 228 394 1.9E-31 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APECO1_RS21080 76e1dd7571a5ec6d2ff1efd480cf43d8 404 SUPERFAMILY SSF69304 18 147 1.96E-21 T 22-04-2016 APECO1_RS21080 76e1dd7571a5ec6d2ff1efd480cf43d8 404 SUPERFAMILY SSF69304 275 403 1.96E-21 T 22-04-2016 APECO1_RS17335 01f659e5b94a9d8edc022e95a9a6c546 186 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 25 182 9.2E-59 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ APECO1_RS17335 01f659e5b94a9d8edc022e95a9a6c546 186 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 184 3.7E-64 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ APECO1_RS04480 18f5eb6c477a519956f42d298cad53a1 284 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 284 4.8E-110 T 22-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 APECO1_RS14810 9eddc944709ec6ef4afe37deef2da94e 113 Pfam PF04355 SmpA / OmlA family 35 104 4.3E-27 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 APECO1_RS14810 9eddc944709ec6ef4afe37deef2da94e 113 PANTHER PTHR37482:SF1 1 113 3.4E-55 T 22-04-2016 APECO1_RS14810 9eddc944709ec6ef4afe37deef2da94e 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 34.055 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE APECO1_RS14810 9eddc944709ec6ef4afe37deef2da94e 113 PANTHER PTHR37482 1 113 3.4E-55 T 22-04-2016 APECO1_RS21155 416a808f4fc13ba68768cf7d39153fcd 46 PANTHER PTHR14503 1 46 2.6E-25 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS21155 416a808f4fc13ba68768cf7d39153fcd 46 Pfam PF00468 Ribosomal protein L34 1 44 1.7E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS21155 416a808f4fc13ba68768cf7d39153fcd 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS21155 416a808f4fc13ba68768cf7d39153fcd 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.6E-27 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS21155 416a808f4fc13ba68768cf7d39153fcd 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS21155 416a808f4fc13ba68768cf7d39153fcd 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APECO1_RS13510 fbe5ec34b1a147ba0f79f3e36cbefaca 130 Pfam PF07037 Putative transcription regulator (DUF1323) 8 129 6.4E-55 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 APECO1_RS13510 fbe5ec34b1a147ba0f79f3e36cbefaca 130 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 8 129 7.0E-58 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 APECO1_RS13510 fbe5ec34b1a147ba0f79f3e36cbefaca 130 SUPERFAMILY SSF46955 5 82 1.83E-13 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS13510 fbe5ec34b1a147ba0f79f3e36cbefaca 130 Gene3D G3DSA:1.10.10.10 7 48 9.7E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS04120 8a51f12ff0ff6f351a5087b594abfae7 125 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 3 117 2.5E-46 T 22-04-2016 IPR020368 Uncharacterised protein family YbjM GO:0016021 APECO1_RS04120 8a51f12ff0ff6f351a5087b594abfae7 125 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 1 118 7.0E-61 T 22-04-2016 IPR020368 Uncharacterised protein family YbjM GO:0016021 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 Gene3D G3DSA:2.20.200.10 302 337 5.6E-16 T 22-04-2016 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 Gene3D G3DSA:2.20.200.10 93 127 5.6E-16 T 22-04-2016 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 452 3.3E-112 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 Pfam PF02321 Outer membrane efflux protein 272 435 4.3E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 Pfam PF02321 Outer membrane efflux protein 57 240 8.0E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 SUPERFAMILY SSF56954 3 453 8.24E-104 T 22-04-2016 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 Gene3D G3DSA:1.20.1600.10 339 453 3.9E-94 T 22-04-2016 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 Gene3D G3DSA:1.20.1600.10 45 83 3.9E-94 T 22-04-2016 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 Gene3D G3DSA:1.20.1600.10 128 301 3.9E-94 T 22-04-2016 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 PANTHER PTHR30203:SF15 5 453 4.3E-131 T 22-04-2016 APECO1_RS07170 2f5e13913c0918372ecdb3df357487dc 457 PANTHER PTHR30203 5 453 4.3E-131 T 22-04-2016 APECO1_RS14245 a5bd760891ee6759579363c41b166882 743 PANTHER PTHR39576 17 393 9.7E-183 T 22-04-2016 APECO1_RS14245 a5bd760891ee6759579363c41b166882 743 PANTHER PTHR39576 416 740 9.7E-183 T 22-04-2016 APECO1_RS14245 a5bd760891ee6759579363c41b166882 743 PANTHER PTHR39576:SF2 17 393 9.7E-183 T 22-04-2016 APECO1_RS14245 a5bd760891ee6759579363c41b166882 743 PANTHER PTHR39576:SF2 416 740 9.7E-183 T 22-04-2016 APECO1_RS14245 a5bd760891ee6759579363c41b166882 743 Pfam PF11924 Invasin beta-domain of outer membrane 62 336 2.8E-103 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane APECO1_RS14245 a5bd760891ee6759579363c41b166882 743 PRINTS PR01369 Intimin signature 284 303 1.5E-8 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 APECO1_RS14245 a5bd760891ee6759579363c41b166882 743 PRINTS PR01369 Intimin signature 216 235 1.5E-8 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 APECO1_RS14245 a5bd760891ee6759579363c41b166882 743 PRINTS PR01369 Intimin signature 188 203 1.5E-8 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 APECO1_RS08800 4a31579b2ad7c12ed3f4d1ed49020a78 109 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 35 96 9.3E-17 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor APECO1_RS08800 4a31579b2ad7c12ed3f4d1ed49020a78 109 SUPERFAMILY SSF141488 28 107 1.26E-23 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor APECO1_RS06430 e441429cae9a895b67b02bf685cb26db 269 Pfam PF13371 Tetratricopeptide repeat 187 259 5.3E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS06430 e441429cae9a895b67b02bf685cb26db 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 7.1E-40 T 22-04-2016 IPR032698 Protein SirB1, N-terminal APECO1_RS06430 e441429cae9a895b67b02bf685cb26db 269 Gene3D G3DSA:1.25.40.10 188 258 6.5E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APECO1_RS06430 e441429cae9a895b67b02bf685cb26db 269 PANTHER PTHR31350 24 261 1.9E-54 T 22-04-2016 APECO1_RS21275 35bab65849b37f27d224829abaa874fa 319 Gene3D G3DSA:1.10.3720.10 25 316 5.3E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS21275 35bab65849b37f27d224829abaa874fa 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 2.2E-92 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 APECO1_RS21275 35bab65849b37f27d224829abaa874fa 319 PANTHER PTHR30425 13 319 3.2E-157 T 22-04-2016 APECO1_RS21275 35bab65849b37f27d224829abaa874fa 319 PANTHER PTHR30425:SF1 13 319 3.2E-157 T 22-04-2016 APECO1_RS21275 35bab65849b37f27d224829abaa874fa 319 SUPERFAMILY SSF161098 27 303 1.3E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS21275 35bab65849b37f27d224829abaa874fa 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 304 1.8E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PANTHER PTHR37533:SF2 2 375 1.6E-121 T 22-04-2016 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 Pfam PF02120 Flagellar hook-length control protein FliK 250 328 1.4E-19 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PANTHER PTHR37533 2 375 1.6E-121 T 22-04-2016 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 117 140 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 213 235 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 279 294 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 20 37 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 236 258 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 55 71 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 261 279 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 2 15 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 358 374 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS10375 48699469753fc35ea16bb8e9130e756f 375 PRINTS PR01007 Flagellar hook-length control protein signature 294 317 8.4E-116 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APECO1_RS14605 f17a8f609315d9b0ec0ff0944e76366a 232 SMART SM01144 27 218 7.2E-72 T 22-04-2016 IPR005636 DTW APECO1_RS14605 f17a8f609315d9b0ec0ff0944e76366a 232 Pfam PF03942 DTW domain 30 211 2.4E-43 T 22-04-2016 IPR005636 DTW APECO1_RS14605 f17a8f609315d9b0ec0ff0944e76366a 232 PANTHER PTHR21392:SF1 1 232 1.9E-142 T 22-04-2016 APECO1_RS14605 f17a8f609315d9b0ec0ff0944e76366a 232 PANTHER PTHR21392 1 232 1.9E-142 T 22-04-2016 APECO1_RS01520 197f5d62ecbb69177074a499ace1198b 222 SUPERFAMILY SSF49354 20 114 5.49E-5 T 22-04-2016 IPR008962 PapD-like APECO1_RS25600 5310c2a520d8825ab2e915427a558bff 110 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 12 106 1.3E-9 T 22-04-2016 IPR009387 Toxin HigB-2 APECO1_RS25600 5310c2a520d8825ab2e915427a558bff 110 PIRSF PIRSF039032 1 110 1.1E-39 T 22-04-2016 IPR009387 Toxin HigB-2 APECO1_RS23470 db05b290a05e4ab24feed31886260ffb 281 PIRSF PIRSF011468 1 281 7.4E-170 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 APECO1_RS23470 db05b290a05e4ab24feed31886260ffb 281 Pfam PF06007 Phosphonate metabolism protein PhnJ 6 277 5.4E-149 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 APECO1_RS22995 12154f3df039988f1454408dded99b18 245 Pfam PF06251 Capsule biosynthesis GfcC 19 245 2.8E-89 T 22-04-2016 IPR010425 Domain of unknown function DUF1017 APECO1_RS17065 0e113ae5d31ffb555fb53ee189717887 272 Pfam PF06067 Domain of unknown function (DUF932) 36 261 6.1E-54 T 22-04-2016 IPR026325 Protein of unknown function DUF932 APECO1_RS00965 94c69c3bdf4efde5f9f410cb5b99010d 198 Pfam PF01351 Ribonuclease HII 13 188 7.6E-39 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain APECO1_RS00965 94c69c3bdf4efde5f9f410cb5b99010d 198 SUPERFAMILY SSF53098 3 195 1.0E-69 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS00965 94c69c3bdf4efde5f9f410cb5b99010d 198 Gene3D G3DSA:3.30.420.10 11 151 6.4E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APECO1_RS00965 94c69c3bdf4efde5f9f410cb5b99010d 198 PANTHER PTHR10954 1 197 1.3E-82 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 APECO1_RS00965 94c69c3bdf4efde5f9f410cb5b99010d 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.144 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 APECO1_RS13955 990de095326f6804dc3e485f0f4ce174 179 ProDom PD095266 MEMBRANE YFGI EXPORTED 1 179 3.0E-80 T 22-04-2016 IPR020231 Uncharacterised protein family, YfgI APECO1_RS16985 16f6c5bd9a3d6b89fa6ba22cc499412f 482 Gene3D G3DSA:3.40.50.300 194 254 9.8E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16985 16f6c5bd9a3d6b89fa6ba22cc499412f 482 Gene3D G3DSA:3.40.50.300 58 140 9.8E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS16985 16f6c5bd9a3d6b89fa6ba22cc499412f 482 Pfam PF13175 AAA ATPase domain 196 240 3.5E-8 T 22-04-2016 APECO1_RS16985 16f6c5bd9a3d6b89fa6ba22cc499412f 482 SUPERFAMILY SSF52540 188 249 2.76E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APECO1_RS05490 53fd3b3ffa801fe18b080a169dc0e83d 173 PANTHER PTHR38099 2 173 6.5E-87 T 22-04-2016 APECO1_RS05490 53fd3b3ffa801fe18b080a169dc0e83d 173 Pfam PF02620 Uncharacterized ACR, COG1399 61 171 1.6E-19 T 22-04-2016 IPR003772 Protein of unknown function DUF177 APECO1_RS13400 bbc2a59d2e3dc33cfe7a59639ec9de7f 48 SUPERFAMILY SSF54648 5 43 9.02E-5 T 22-04-2016 APECO1_RS17060 f15fdd5f5eb8488087c32d278ee830d5 77 Gene3D G3DSA:3.30.160.130 5 77 2.2E-40 T 22-04-2016 APECO1_RS17060 f15fdd5f5eb8488087c32d278ee830d5 77 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 9 74 9.0E-34 T 22-04-2016 IPR009253 Protein of unknown function DUF905 APECO1_RS17060 f15fdd5f5eb8488087c32d278ee830d5 77 Pfam PF06006 Bacterial protein of unknown function (DUF905) 8 74 3.3E-31 T 22-04-2016 IPR009253 Protein of unknown function DUF905 APECO1_RS17060 f15fdd5f5eb8488087c32d278ee830d5 77 SUPERFAMILY SSF54786 12 77 1.26E-31 T 22-04-2016 APECO1_RS13505 4cc6367ba3526a3be10334ec7067599c 114 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 1 114 9.0E-61 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 APECO1_RS13505 4cc6367ba3526a3be10334ec7067599c 114 Pfam PF07037 Putative transcription regulator (DUF1323) 1 113 2.1E-49 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 APECO1_RS13505 4cc6367ba3526a3be10334ec7067599c 114 SUPERFAMILY SSF46955 1 57 1.28E-12 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS13505 4cc6367ba3526a3be10334ec7067599c 114 Gene3D G3DSA:1.10.10.10 1 61 2.2E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS01980 61e2e7dc1bc53bd7c01745d1e8237784 63 Pfam PF16362 YaiA protein 1 63 2.1E-39 T 22-04-2016 IPR032303 YaiA protein APECO1_RS04705 e7a74f51688a46cc5d5488fd7d008fa8 297 Pfam PF01636 Phosphotransferase enzyme family 64 238 3.1E-6 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase APECO1_RS04705 e7a74f51688a46cc5d5488fd7d008fa8 297 Gene3D G3DSA:3.90.1200.10 94 255 5.2E-8 T 22-04-2016 APECO1_RS04705 e7a74f51688a46cc5d5488fd7d008fa8 297 SUPERFAMILY SSF56112 4 270 7.14E-27 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS14470 511ed5f395f9125b5e134b54e34a64b6 211 Gene3D G3DSA:3.40.50.1000 99 129 6.8E-5 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS14470 511ed5f395f9125b5e134b54e34a64b6 211 Gene3D G3DSA:3.40.50.1000 4 29 6.8E-5 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS14470 511ed5f395f9125b5e134b54e34a64b6 211 SUPERFAMILY SSF56784 6 137 2.21E-7 T 22-04-2016 IPR023214 HAD-like domain APECO1_RS14470 511ed5f395f9125b5e134b54e34a64b6 211 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 2 211 2.0E-135 T 22-04-2016 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APECO1_RS14470 511ed5f395f9125b5e134b54e34a64b6 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 2.4E-12 T 22-04-2016 APECO1_RS23770 0a8d6861ebf9f86382241bcbd776c52e 96 Pfam PF01527 Transposase 8 88 9.6E-23 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APECO1_RS23770 0a8d6861ebf9f86382241bcbd776c52e 96 PANTHER PTHR37936 1 82 4.2E-33 T 22-04-2016 APECO1_RS23770 0a8d6861ebf9f86382241bcbd776c52e 96 SUPERFAMILY SSF48295 4 63 2.77E-14 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APECO1_RS23770 0a8d6861ebf9f86382241bcbd776c52e 96 Gene3D G3DSA:1.10.10.60 16 85 3.7E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS19625 8b2cace927f1ecf3ec14e94b94c7d677 864 Pfam PF00577 Outer membrane usher protein 196 773 1.1E-198 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS19625 8b2cace927f1ecf3ec14e94b94c7d677 864 PANTHER PTHR30451:SF2 3 864 0.0 T 22-04-2016 APECO1_RS19625 8b2cace927f1ecf3ec14e94b94c7d677 864 PANTHER PTHR30451 3 864 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APECO1_RS19625 8b2cace927f1ecf3ec14e94b94c7d677 864 Pfam PF13954 PapC N-terminal domain 39 183 1.0E-43 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APECO1_RS19625 8b2cace927f1ecf3ec14e94b94c7d677 864 SUPERFAMILY SSF141729 38 160 5.89E-29 T 22-04-2016 APECO1_RS19625 8b2cace927f1ecf3ec14e94b94c7d677 864 Pfam PF13953 PapC C-terminal domain 782 849 8.9E-20 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APECO1_RS25375 db2fbf5f3c3b1b295676dae1686fd647 163 Pfam PF07278 Protein of unknown function (DUF1441) 10 150 9.4E-51 T 22-04-2016 IPR009901 Bacteriophage VT1-Sakai, H0025 APECO1_RS02865 657435f2e7d9e4e443d79e0d08337978 330 SUPERFAMILY SSF81345 3 325 2.35E-72 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS02865 657435f2e7d9e4e443d79e0d08337978 330 PANTHER PTHR30472 1 330 3.9E-171 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS02865 657435f2e7d9e4e443d79e0d08337978 330 Gene3D G3DSA:1.10.3470.10 6 329 9.7E-91 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS02865 657435f2e7d9e4e443d79e0d08337978 330 Pfam PF01032 FecCD transport family 20 324 5.3E-84 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS02865 657435f2e7d9e4e443d79e0d08337978 330 PANTHER PTHR30472:SF24 1 330 3.9E-171 T 22-04-2016 APECO1_RS23230 74f001ecf58a0053fbf03fb3e8c5af9c 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 93 4.0E-37 T 22-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 APECO1_RS23230 74f001ecf58a0053fbf03fb3e8c5af9c 93 Pfam PF15940 Family of unknown function 1 90 1.4E-43 T 22-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 APECO1_RS23230 74f001ecf58a0053fbf03fb3e8c5af9c 93 PIRSF PIRSF030798 1 93 5.0E-66 T 22-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 APECO1_RS07640 5683f21cb9e705ece2f5d1eea94e4e23 379 Pfam PF11651 P22 coat protein - gene protein 5 108 266 7.1E-13 T 22-04-2016 IPR024659 Major capsid protein Gp5 APECO1_RS03095 416e6b328d255b232fc4d25449f34574 105 Gene3D G3DSA:3.30.460.10 4 105 4.1E-38 T 22-04-2016 APECO1_RS03095 416e6b328d255b232fc4d25449f34574 105 PANTHER PTHR21043 1 105 1.9E-48 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APECO1_RS03095 416e6b328d255b232fc4d25449f34574 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.806 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APECO1_RS03095 416e6b328d255b232fc4d25449f34574 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 4.4E-38 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APECO1_RS03095 416e6b328d255b232fc4d25449f34574 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 7.0E-29 T 22-04-2016 APECO1_RS03095 416e6b328d255b232fc4d25449f34574 105 SUPERFAMILY SSF81301 4 105 1.59E-37 T 22-04-2016 APECO1_RS07980 b364b8142825d0e9631631927d3a3570 56 ProDom PD057831 YNCJ PRECURSOR SIGNAL PERIPLASMIC STY1461 1 56 3.0E-27 T 22-04-2016 IPR020117 Uncharacterised protein family YncJ APECO1_RS07980 b364b8142825d0e9631631927d3a3570 56 Pfam PF10829 Protein of unknown function (DUF2554) 1 56 1.6E-35 T 22-04-2016 IPR020117 Uncharacterised protein family YncJ APECO1_RS12480 b882043c4414583e634a714e1e1187aa 216 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 11 213 3.3E-72 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 APECO1_RS12480 b882043c4414583e634a714e1e1187aa 216 SUPERFAMILY SSF56112 37 179 3.61E-7 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS12480 b882043c4414583e634a714e1e1187aa 216 PIRSF PIRSF026326 1 216 2.7E-62 T 22-04-2016 IPR027023 Putative lipopolysaccharide kinase InaA APECO1_RS06040 42c4f216a018683e633d4051c4313657 109 Pfam PF05939 Phage minor tail protein 2 108 3.1E-36 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail APECO1_RS01485 d4d8f7e4c50e99dbc12099b344185ff7 74 Pfam PF03400 IS1 transposase 8 74 1.1E-32 T 22-04-2016 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 APECO1_RS09320 34dd62a4996acbdbf4f642f068dc8144 112 Pfam PF04355 SmpA / OmlA family 33 96 4.0E-11 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 APECO1_RS10110 48c640993214bdae296ba7c2bf30318e 295 PANTHER PTHR30433:SF4 1 289 4.5E-192 T 22-04-2016 IPR022522 Flagellar motor stator, MotA APECO1_RS10110 48c640993214bdae296ba7c2bf30318e 295 PANTHER PTHR30433 1 289 4.5E-192 T 22-04-2016 APECO1_RS10110 48c640993214bdae296ba7c2bf30318e 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 1.3E-115 T 22-04-2016 IPR022522 Flagellar motor stator, MotA APECO1_RS10110 48c640993214bdae296ba7c2bf30318e 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site APECO1_RS10110 48c640993214bdae296ba7c2bf30318e 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 239 4.0E-11 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APECO1_RS20095 2a39268a64b85225e63b7e5aeba5084b 207 PANTHER PTHR15020 1 200 4.9E-30 T 22-04-2016 APECO1_RS20095 2a39268a64b85225e63b7e5aeba5084b 207 SUPERFAMILY SSF51735 5 202 2.32E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20095 2a39268a64b85225e63b7e5aeba5084b 207 Pfam PF13460 NAD(P)H-binding 9 190 1.0E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS20095 2a39268a64b85225e63b7e5aeba5084b 207 Gene3D G3DSA:3.40.50.720 4 202 1.6E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS09325 d861881c635d949967c751375ff24762 275 SUPERFAMILY SSF52402 3 273 3.91E-87 T 22-04-2016 APECO1_RS09325 d861881c635d949967c751375ff24762 275 Pfam PF02540 NAD synthase 23 265 2.8E-81 T 22-04-2016 IPR022310 NAD/GMP synthase APECO1_RS09325 d861881c635d949967c751375ff24762 275 Gene3D G3DSA:3.40.50.620 4 269 4.1E-68 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APECO1_RS09325 d861881c635d949967c751375ff24762 275 PANTHER PTHR23090:SF7 1 274 4.7E-172 T 22-04-2016 APECO1_RS09325 d861881c635d949967c751375ff24762 275 PANTHER PTHR23090 1 274 4.7E-172 T 22-04-2016 APECO1_RS09325 d861881c635d949967c751375ff24762 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 16 275 5.2E-88 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APECO1_RS09325 d861881c635d949967c751375ff24762 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 31.643 T 22-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APECO1_RS02760 c2e624be0ba69384af0468b18dd124e3 110 Pfam PF11604 Copper binding periplasmic protein CusF 42 102 1.4E-21 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF APECO1_RS21730 d15e0aacc18f8399618694380a7af6ac 165 Pfam PF06092 Enterobacterial putative membrane protein (DUF943) 3 152 1.7E-30 T 22-04-2016 IPR010351 Protein of unknown function DUF943 APECO1_RS25265 39aff73dbcbf71356ca3f3f6c6cf9705 86 Pfam PF01381 Helix-turn-helix 5 57 3.6E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS25265 39aff73dbcbf71356ca3f3f6c6cf9705 86 SUPERFAMILY SSF47413 5 59 2.73E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS25265 39aff73dbcbf71356ca3f3f6c6cf9705 86 Gene3D G3DSA:1.10.260.40 5 59 2.6E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS25265 39aff73dbcbf71356ca3f3f6c6cf9705 86 SMART SM00530 4 59 3.5E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS21920 15995a74a301871051c511a313ce9acc 475 PANTHER PTHR30563 37 467 1.5E-147 T 22-04-2016 APECO1_RS21920 15995a74a301871051c511a313ce9acc 475 Pfam PF02646 RmuC family 136 432 1.4E-107 T 22-04-2016 IPR003798 DNA recombination RmuC APECO1_RS14975 45444859ed625f7dfc0e2b469b0f0677 413 Pfam PF04860 Phage portal protein 47 373 3.3E-99 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein APECO1_RS14975 45444859ed625f7dfc0e2b469b0f0677 413 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 39 379 3.3E-78 T 22-04-2016 IPR006427 Phage portal protein, HK97 APECO1_RS13485 7ef397182a8bc6505c911d9ccddd495e 400 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 398 8.5E-59 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS13485 7ef397182a8bc6505c911d9ccddd495e 400 Pfam PF07670 Nucleoside recognition 92 189 5.2E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS13485 7ef397182a8bc6505c911d9ccddd495e 400 PANTHER PTHR10590:SF13 1 400 1.2E-260 T 22-04-2016 APECO1_RS13485 7ef397182a8bc6505c911d9ccddd495e 400 PANTHER PTHR10590 1 400 1.2E-260 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS13485 7ef397182a8bc6505c911d9ccddd495e 400 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 398 1.4E-146 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS13485 7ef397182a8bc6505c911d9ccddd495e 400 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 3.7E-21 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS21680 dc343b156af7733f266206c0e34d4d10 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 6.1E-9 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site APECO1_RS21595 a615a48640073c97928c4c9b3140cc49 450 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 43.025 T 22-04-2016 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 UniPathway: UPA00566 APECO1_RS21595 a615a48640073c97928c4c9b3140cc49 450 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 446 1.1E-263 T 22-04-2016 APECO1_RS12110 3b78699f80efcbcf8f3831107a91badc 313 Gene3D G3DSA:3.40.1190.20 6 308 4.9E-66 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS12110 3b78699f80efcbcf8f3831107a91badc 313 Pfam PF00294 pfkB family carbohydrate kinase 5 295 6.2E-63 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APECO1_RS12110 3b78699f80efcbcf8f3831107a91badc 313 SUPERFAMILY SSF53613 7 305 4.05E-60 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS12110 3b78699f80efcbcf8f3831107a91badc 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 40 64 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS12110 3b78699f80efcbcf8f3831107a91badc 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APECO1_RS15040 48506daf95c3ad2d1321c8ad3f3cb6ec 265 SMART SM01252 8 107 2.6E-40 T 22-04-2016 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding APECO1_RS15040 48506daf95c3ad2d1321c8ad3f3cb6ec 265 Pfam PF04383 KilA-N domain 8 104 8.2E-24 T 22-04-2016 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding APECO1_RS09155 efb2f220b7e5ca05fb195b365a400b33 63 Pfam PF10636 Hemin uptake protein hemP 27 63 7.5E-15 T 22-04-2016 IPR019600 Hemin uptake protein HemP APECO1_RS09155 efb2f220b7e5ca05fb195b365a400b33 63 Gene3D G3DSA:2.10.70.10 23 63 2.1E-18 T 22-04-2016 APECO1_RS24975 72c14e68e8a2c86809ba3eb2fa0ee089 467 PANTHER PTHR33451 1 466 9.4E-122 T 22-04-2016 APECO1_RS24975 72c14e68e8a2c86809ba3eb2fa0ee089 467 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 4 457 7.8E-114 T 22-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 APECO1_RS24975 72c14e68e8a2c86809ba3eb2fa0ee089 467 Pfam PF03553 Na+/H+ antiporter family 158 456 1.2E-41 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 APECO1_RS24975 72c14e68e8a2c86809ba3eb2fa0ee089 467 PANTHER PTHR33451:SF3 1 466 9.4E-122 T 22-04-2016 APECO1_RS06010 d16896577d72f37f9bcd241ea27e0375 192 PIRSF PIRSF004395 1 192 2.3E-97 T 22-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APECO1_RS06010 d16896577d72f37f9bcd241ea27e0375 192 Pfam PF06763 Prophage minor tail protein Z (GPZ) 3 192 1.7E-78 T 22-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APECO1_RS19670 dc51984d80554aca95c9f299030edaaf 197 PANTHER PTHR33508:SF4 1 197 3.1E-95 T 22-04-2016 APECO1_RS19670 dc51984d80554aca95c9f299030edaaf 197 Pfam PF01914 MarC family integral membrane protein 1 195 2.5E-65 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APECO1_RS19670 dc51984d80554aca95c9f299030edaaf 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 191 3.9E-31 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APECO1_RS19670 dc51984d80554aca95c9f299030edaaf 197 PANTHER PTHR33508 1 197 3.1E-95 T 22-04-2016 APECO1_RS16025 0b8a5b8cbb0b11266cd277a9550f5553 86 PANTHER PTHR37465 1 85 1.3E-12 T 22-04-2016 APECO1_RS16025 0b8a5b8cbb0b11266cd277a9550f5553 86 PANTHER PTHR37465:SF1 1 85 1.3E-12 T 22-04-2016 APECO1_RS16025 0b8a5b8cbb0b11266cd277a9550f5553 86 Pfam PF05488 PAAR motif 8 77 5.5E-21 T 22-04-2016 IPR008727 PAAR motif APECO1_RS04440 970201ff952d49563d50e4a48337ded2 74 Pfam PF10809 Protein of unknown function (DUF2732) 13 65 1.1E-17 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 APECO1_RS21035 ea3bb3b2b3d8f47b24456920edfefe29 115 PANTHER PTHR34187 3 115 1.6E-36 T 22-04-2016 APECO1_RS21035 ea3bb3b2b3d8f47b24456920edfefe29 115 Pfam PF02656 Domain of unknown function (DUF202) 13 79 1.2E-15 T 22-04-2016 IPR003807 Domain of unknown function DUF202 APECO1_RS13195 edbbeb29fb35bbb222786d2d0240e3a9 58 Pfam PF05810 NinF protein 1 57 5.1E-34 T 22-04-2016 IPR008712 NinF APECO1_RS08945 d779a5bdfba598127da2c15726a7cde9 101 SUPERFAMILY SSF54909 4 96 7.66E-33 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APECO1_RS08945 d779a5bdfba598127da2c15726a7cde9 101 PANTHER PTHR39169:SF1 1 101 6.0E-45 T 22-04-2016 APECO1_RS08945 d779a5bdfba598127da2c15726a7cde9 101 PANTHER PTHR39169 1 101 6.0E-45 T 22-04-2016 APECO1_RS08945 d779a5bdfba598127da2c15726a7cde9 101 Pfam PF08803 Putative mono-oxygenase ydhR 4 98 1.1E-40 T 22-04-2016 IPR014910 Putative monooxygenase YdhR KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- APECO1_RS24380 4781572aaf963790cf6fd00e0138473f 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS24380 4781572aaf963790cf6fd00e0138473f 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 9.9E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS24380 4781572aaf963790cf6fd00e0138473f 154 PANTHER PTHR30505 1 151 5.9E-93 T 22-04-2016 APECO1_RS24380 4781572aaf963790cf6fd00e0138473f 154 PANTHER PTHR30505:SF10 1 151 5.9E-93 T 22-04-2016 APECO1_RS24380 4781572aaf963790cf6fd00e0138473f 154 SUPERFAMILY SSF55804 7 148 1.96E-36 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APECO1_RS24380 4781572aaf963790cf6fd00e0138473f 154 Gene3D G3DSA:3.40.930.10 6 150 3.8E-52 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APECO1_RS10425 72e2520f273898f23d559569705062d9 75 Pfam PF10733 Protein of unknown function (DUF2525) 18 75 2.3E-33 T 22-04-2016 IPR019669 Uncharacterised bacterial stress protein YodD APECO1_RS18205 8125f8aec62694d2ccb1f501df2925f0 211 SUPERFAMILY SSF51735 2 200 2.91E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18205 8125f8aec62694d2ccb1f501df2925f0 211 PANTHER PTHR14097 3 211 2.6E-74 T 22-04-2016 APECO1_RS18205 8125f8aec62694d2ccb1f501df2925f0 211 Pfam PF13460 NAD(P)H-binding 8 190 3.4E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18205 8125f8aec62694d2ccb1f501df2925f0 211 Gene3D G3DSA:3.40.50.720 2 209 3.7E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS18205 8125f8aec62694d2ccb1f501df2925f0 211 SMART SM00859 3 103 0.0058 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APECO1_RS18205 8125f8aec62694d2ccb1f501df2925f0 211 PANTHER PTHR14097:SF7 3 211 2.6E-74 T 22-04-2016 APECO1_RS19705 791cb59c2f075d6933515628a593a878 162 SUPERFAMILY SSF55729 4 161 6.86E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS19705 791cb59c2f075d6933515628a593a878 162 Gene3D G3DSA:3.40.630.30 2 160 9.3E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS19705 791cb59c2f075d6933515628a593a878 162 Pfam PF00583 Acetyltransferase (GNAT) family 57 137 4.8E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS19705 791cb59c2f075d6933515628a593a878 162 PANTHER PTHR23091 1 161 8.7E-100 T 22-04-2016 APECO1_RS19705 791cb59c2f075d6933515628a593a878 162 PANTHER PTHR23091:SF262 1 161 8.7E-100 T 22-04-2016 APECO1_RS06790 0c9ba25ca9cdbbe50d176a3aabf712f9 114 Pfam PF07041 Protein of unknown function (DUF1327) 1 112 6.2E-60 T 22-04-2016 IPR009759 Bacteriophage ES18, Gp24 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 Gene3D G3DSA:1.10.8.260 270 322 4.8E-25 T 22-04-2016 IPR023166 HI0933 insert-like domain APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 Gene3D G3DSA:3.50.50.60 339 394 2.4E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 Gene3D G3DSA:3.50.50.60 3 186 2.4E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 3.5E-128 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PANTHER PTHR10617:SF103 330 396 1.9E-140 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 SUPERFAMILY SSF51905 337 394 7.86E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 SUPERFAMILY SSF51905 3 188 7.86E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 Pfam PF03486 HI0933-like protein 5 392 3.9E-156 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 Gene3D G3DSA:2.40.30.10 188 269 2.4E-29 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 SUPERFAMILY SSF160996 190 338 8.24E-43 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PANTHER PTHR10617 2 286 1.9E-140 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 6.3E-5 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 6.3E-5 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.3E-5 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PANTHER PTHR10617:SF103 2 286 1.9E-140 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PANTHER PTHR10617 330 396 1.9E-140 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 7.4E-7 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 7.4E-7 T 22-04-2016 APECO1_RS19995 354388e432f1472b2eb344645a4c4e03 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.4E-7 T 22-04-2016 APECO1_RS24795 45dabfe8644e5e8f68f7d8a9a27790c5 326 PANTHER PTHR31988 146 313 5.9E-54 T 22-04-2016 APECO1_RS24795 45dabfe8644e5e8f68f7d8a9a27790c5 326 PANTHER PTHR31988 88 127 5.9E-54 T 22-04-2016 APECO1_RS24795 45dabfe8644e5e8f68f7d8a9a27790c5 326 PANTHER PTHR31988 1 64 5.9E-54 T 22-04-2016 APECO1_RS24795 45dabfe8644e5e8f68f7d8a9a27790c5 326 SUPERFAMILY SSF52266 10 265 1.83E-42 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APECO1_RS24795 45dabfe8644e5e8f68f7d8a9a27790c5 326 SUPERFAMILY SSF52266 297 323 1.83E-42 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APECO1_RS24795 45dabfe8644e5e8f68f7d8a9a27790c5 326 PANTHER PTHR31988:SF1 146 313 5.9E-54 T 22-04-2016 APECO1_RS24795 45dabfe8644e5e8f68f7d8a9a27790c5 326 PANTHER PTHR31988:SF1 88 127 5.9E-54 T 22-04-2016 APECO1_RS24795 45dabfe8644e5e8f68f7d8a9a27790c5 326 PANTHER PTHR31988:SF1 1 64 5.9E-54 T 22-04-2016 APECO1_RS21900 65f593ed1e01cfac27c02c745e32ad40 324 PANTHER PTHR30349 11 292 4.0E-60 T 22-04-2016 APECO1_RS21900 65f593ed1e01cfac27c02c745e32ad40 324 PANTHER PTHR30349:SF1 11 292 4.0E-60 T 22-04-2016 APECO1_RS21900 65f593ed1e01cfac27c02c745e32ad40 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 321 2.8E-58 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 APECO1_RS21900 65f593ed1e01cfac27c02c745e32ad40 324 SUPERFAMILY SSF53850 120 289 2.28E-9 T 22-04-2016 APECO1_RS21900 65f593ed1e01cfac27c02c745e32ad40 324 PIRSF PIRSF017082 1 324 8.4E-105 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 APECO1_RS15900 05793d33afddf98c3a809ef19fa95319 140 PANTHER PTHR31690:SF6 1 140 1.4E-63 T 22-04-2016 APECO1_RS15900 05793d33afddf98c3a809ef19fa95319 140 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 140 48.785 T 22-04-2016 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 UniPathway: UPA00956 APECO1_RS15900 05793d33afddf98c3a809ef19fa95319 140 Pfam PF05025 RbsD / FucU transport protein family 4 139 9.6E-35 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 APECO1_RS15900 05793d33afddf98c3a809ef19fa95319 140 PANTHER PTHR31690 1 140 1.4E-63 T 22-04-2016 APECO1_RS15900 05793d33afddf98c3a809ef19fa95319 140 SUPERFAMILY SSF102546 1 139 1.96E-38 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APECO1_RS15900 05793d33afddf98c3a809ef19fa95319 140 Gene3D G3DSA:3.40.1650.10 1 139 8.4E-50 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APECO1_RS25285 5cf9c899dbf08f0deac1705513106dc5 272 Pfam PF13730 Helix-turn-helix domain 19 66 1.6E-9 T 22-04-2016 APECO1_RS25285 5cf9c899dbf08f0deac1705513106dc5 272 Gene3D G3DSA:1.10.10.10 14 86 3.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS25285 5cf9c899dbf08f0deac1705513106dc5 272 SUPERFAMILY SSF46785 14 74 1.53E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS11550 4b7eb511f139225f6271b2974f163824 404 Pfam PF14284 PcfJ-like protein 139 268 6.4E-8 T 22-04-2016 IPR025586 PcfJ-like protein APECO1_RS01325 ecc5a635e995e76849ec0f547771981e 97 PANTHER PTHR33713:SF5 1 92 1.5E-34 T 22-04-2016 APECO1_RS01325 ecc5a635e995e76849ec0f547771981e 97 SUPERFAMILY SSF143120 9 56 3.01E-6 T 22-04-2016 APECO1_RS01325 ecc5a635e995e76849ec0f547771981e 97 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 7 52 2.1E-6 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APECO1_RS01325 ecc5a635e995e76849ec0f547771981e 97 PANTHER PTHR33713 1 92 1.5E-34 T 22-04-2016 APECO1_RS07820 88d8f9b0d9a4ebe4ec8e853ac9add684 879 Pfam PF11739 Dicarboxylate transport 657 858 4.3E-63 T 22-04-2016 IPR021730 Dicarboxylate transport APECO1_RS06310 a55b93dd6c48bdb5a80b2aa35f912a2e 84 Pfam PF04226 Transglycosylase associated protein 34 83 1.2E-13 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 APECO1_RS06310 a55b93dd6c48bdb5a80b2aa35f912a2e 84 PANTHER PTHR33884:SF2 1 84 6.4E-59 T 22-04-2016 APECO1_RS06310 a55b93dd6c48bdb5a80b2aa35f912a2e 84 PANTHER PTHR33884 1 84 6.4E-59 T 22-04-2016 APECO1_RS09975 230fd4bdaa79353b9f7cced2abe828d4 200 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 9 184 1.1E-45 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family APECO1_RS09975 230fd4bdaa79353b9f7cced2abe828d4 200 Gene3D G3DSA:2.30.30.330 7 188 7.8E-46 T 22-04-2016 APECO1_RS09975 230fd4bdaa79353b9f7cced2abe828d4 200 SUPERFAMILY SSF54001 9 185 7.85E-35 T 22-04-2016 APECO1_RS21205 9eaed295d4e16ef123f304fe837c1cde 249 Gene3D G3DSA:3.90.470.20 33 107 8.2E-8 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APECO1_RS07810 a8230322ca3f8cd7707e73a8069039a3 140 PANTHER PTHR35535 1 140 6.3E-41 T 22-04-2016 APECO1_RS07810 a8230322ca3f8cd7707e73a8069039a3 140 Pfam PF03724 META domain 28 131 3.5E-23 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ APECO1_RS06805 5a8d2c1a1b1c0867e61829a3af1252d8 154 Pfam PF03245 Bacteriophage Rz lysis protein 30 153 5.8E-49 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 APECO1_RS23710 c9e7234546cdac08b8acf9566821c7a2 272 Pfam PF06067 Domain of unknown function (DUF932) 37 261 3.3E-51 T 22-04-2016 IPR026325 Protein of unknown function DUF932 APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 Pfam PF01478 Type IV leader peptidase family 130 239 9.4E-19 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 197 207 3.56E-12 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 220 235 3.56E-12 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 208 219 3.56E-12 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 139 156 3.56E-12 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 118 2.2E-34 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 PANTHER PTHR30487:SF0 53 263 1.1E-94 T 22-04-2016 APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 PANTHER PTHR30487:SF0 1 37 1.1E-94 T 22-04-2016 APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 PANTHER PTHR30487 53 263 1.1E-94 T 22-04-2016 APECO1_RS17250 cb43ecc7d6fc163ea6e2158b864d4a63 269 PANTHER PTHR30487 1 37 1.1E-94 T 22-04-2016 APECO1_RS24500 dc3a5505129fdd7290c2d181c18aa2ea 286 PANTHER PTHR14194:SF73 2 281 6.1E-119 T 22-04-2016 APECO1_RS24500 dc3a5505129fdd7290c2d181c18aa2ea 286 Pfam PF05368 NmrA-like family 2 220 2.0E-22 T 22-04-2016 IPR008030 NmrA-like domain APECO1_RS24500 dc3a5505129fdd7290c2d181c18aa2ea 286 PANTHER PTHR14194 2 281 6.1E-119 T 22-04-2016 APECO1_RS24500 dc3a5505129fdd7290c2d181c18aa2ea 286 SUPERFAMILY SSF51735 2 252 1.25E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS24500 dc3a5505129fdd7290c2d181c18aa2ea 286 Gene3D G3DSA:3.40.50.720 2 218 1.5E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APECO1_RS14785 aa465c0130340602a4ca7e1fbe23639e 263 PANTHER PTHR38034 2 263 3.2E-104 T 22-04-2016 APECO1_RS14785 aa465c0130340602a4ca7e1fbe23639e 263 Pfam PF01578 Cytochrome C assembly protein 37 261 5.0E-45 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APECO1_RS14125 facfb44fc8f294cd3cd9b6b4ca7d56d6 176 Pfam PF04448 Protein of unknown function (DUF551) 115 173 2.3E-9 T 22-04-2016 IPR007539 Domain of unknown function DUF551 APECO1_RS14125 facfb44fc8f294cd3cd9b6b4ca7d56d6 176 Pfam PF13935 Ead/Ea22-like protein 2 90 1.1E-21 T 22-04-2016 IPR025153 Ead/Ea22-like protein APECO1_RS25455 29b0f8ab17314866d96f7ee14055ae08 202 Pfam PF06805 Bacteriophage lambda tail assembly protein I 1 84 3.1E-28 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I APECO1_RS02555 e6146dd0325f9d4f5520a1158d424375 804 Pfam PF02687 FtsX-like permease family 683 794 2.4E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APECO1_RS02555 e6146dd0325f9d4f5520a1158d424375 804 Pfam PF02687 FtsX-like permease family 247 364 1.5E-10 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APECO1_RS02555 e6146dd0325f9d4f5520a1158d424375 804 PANTHER PTHR30287 1 793 1.2E-173 T 22-04-2016 APECO1_RS05995 78b4dc62bf693090851a01b65f80d128 342 Pfam PF03864 Phage major capsid protein E 4 339 3.5E-65 T 22-04-2016 IPR005564 Major capsid protein GpE GO:0019028 APECO1_RS05995 78b4dc62bf693090851a01b65f80d128 342 Gene3D G3DSA:3.15.30.10 1 155 1.5E-92 T 22-04-2016 APECO1_RS05995 78b4dc62bf693090851a01b65f80d128 342 Gene3D G3DSA:3.15.30.10 287 330 1.5E-92 T 22-04-2016 APECO1_RS05995 78b4dc62bf693090851a01b65f80d128 342 Gene3D G3DSA:3.30.1930.10 156 286 1.8E-60 T 22-04-2016 APECO1_RS18130 8240437c0aaaf445ba115c559530a107 292 PANTHER PTHR32502 22 286 1.6E-83 T 22-04-2016 APECO1_RS18130 8240437c0aaaf445ba115c559530a107 292 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 291 1.4E-92 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APECO1_RS18130 8240437c0aaaf445ba115c559530a107 292 PANTHER PTHR32502:SF6 22 286 1.6E-83 T 22-04-2016 APECO1_RS14875 5b7990644f824eafd2ee6812923e6f42 147 PANTHER PTHR34413:SF1 4 147 4.5E-50 T 22-04-2016 APECO1_RS14875 5b7990644f824eafd2ee6812923e6f42 147 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 10 142 8.6E-25 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly APECO1_RS14875 5b7990644f824eafd2ee6812923e6f42 147 PANTHER PTHR34413 4 147 4.5E-50 T 22-04-2016 APECO1_RS13570 e8132fc59933e17a715e753771c482b7 332 PANTHER PTHR18640:SF9 1 327 3.6E-134 T 22-04-2016 APECO1_RS13570 e8132fc59933e17a715e753771c482b7 332 PIRSF PIRSF026166 1 332 4.2E-137 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter APECO1_RS13570 e8132fc59933e17a715e753771c482b7 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 8.1E-104 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter APECO1_RS13570 e8132fc59933e17a715e753771c482b7 332 PANTHER PTHR18640 1 327 3.6E-134 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter APECO1_RS27535 41f603782424395bc9d620ce19a3d625 122 PANTHER PTHR30535 1 118 2.2E-25 T 22-04-2016 APECO1_RS27535 41f603782424395bc9d620ce19a3d625 122 Pfam PF01497 Periplasmic binding protein 3 120 1.3E-11 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APECO1_RS27535 41f603782424395bc9d620ce19a3d625 122 SUPERFAMILY SSF53807 1 120 8.24E-27 T 22-04-2016 APECO1_RS27535 41f603782424395bc9d620ce19a3d625 122 Gene3D G3DSA:3.40.50.1980 46 121 1.3E-28 T 22-04-2016 APECO1_RS08035 cdfc413c0c17f7e009218c5af0acba7d 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 143 3.2E-21 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ APECO1_RS14930 fc4f670d94c4bed80d4cd868eca33b29 498 Pfam PF04984 Phage tail sheath protein 8 489 1.5E-75 T 22-04-2016 IPR007067 Tail sheath protein APECO1_RS14930 fc4f670d94c4bed80d4cd868eca33b29 498 PIRSF PIRSF007349 1 491 3.0E-201 T 22-04-2016 IPR007067 Tail sheath protein APECO1_RS15055 efcef1bebecd583780c328576789f525 217 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 14 197 1.4E-76 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 APECO1_RS15055 efcef1bebecd583780c328576789f525 217 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 17 201 9.3E-62 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 APECO1_RS17425 f462ced71b96ba4ecec883716611ad36 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 95 1.0E-51 T 22-04-2016 IPR022574 Protein of unknown function DUF2623 APECO1_RS17425 f462ced71b96ba4ecec883716611ad36 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 6.2E-48 T 22-04-2016 IPR022574 Protein of unknown function DUF2623 APECO1_RS16090 e62c0da996c2018a9b6149a2a166eb3b 458 PANTHER PTHR37024 14 456 1.3E-37 T 22-04-2016 APECO1_RS16090 e62c0da996c2018a9b6149a2a166eb3b 458 Pfam PF06812 ImpA, N-terminal, type VI secretion system 25 112 1.0E-11 T 22-04-2016 IPR010657 ImpA, N-terminal APECO1_RS16090 e62c0da996c2018a9b6149a2a166eb3b 458 PANTHER PTHR37024:SF1 14 456 1.3E-37 T 22-04-2016 APECO1_RS16090 e62c0da996c2018a9b6149a2a166eb3b 458 Pfam PF12486 Type VI secretion system, EvfB, or VasL 306 448 2.2E-42 T 22-04-2016 IPR021069 ImpA, C-terminal APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 PANTHER PTHR32303:SF8 1 392 9.6E-215 T 22-04-2016 APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 Gene3D G3DSA:2.140.10.10 3 390 8.0E-78 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 40.824 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 SUPERFAMILY SSF50998 25 382 1.08E-79 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 Pfam PF13360 PQQ-like domain 78 319 5.5E-53 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 PANTHER PTHR32303 1 392 9.6E-215 T 22-04-2016 APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 SMART SM00564 114 146 1.3E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 SMART SM00564 65 96 1.9E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 SMART SM00564 155 186 5.3E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 SMART SM00564 289 320 310.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 SMART SM00564 200 231 66.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 SMART SM00564 251 282 7.7E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 SMART SM00564 329 361 1.6E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APECO1_RS14260 a5d599ac260df6f0c4597451ec66e891 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 390 2.2E-133 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB APECO1_RS10160 96c5f61e193689d16bb38315cf420562 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 2.3E-48 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ APECO1_RS10160 96c5f61e193689d16bb38315cf420562 83 ProDom PD060536 YECJ YPO1738 1 77 1.0E-37 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ APECO1_RS00610 f5248d3eb6fc41b9c0e5a7039bc3ad3f 79 Gene3D G3DSA:3.90.540.10 1 64 1.3E-14 T 22-04-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 APECO1_RS00610 f5248d3eb6fc41b9c0e5a7039bc3ad3f 79 SUPERFAMILY SSF54060 1 64 1.65E-11 T 22-04-2016 APECO1_RS19150 31ddcfe44c37fad82bdef106c899a106 225 Pfam PF01478 Type IV leader peptidase family 82 189 5.4E-29 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 APECO1_RS19150 31ddcfe44c37fad82bdef106c899a106 225 PANTHER PTHR30487 2 217 4.3E-57 T 22-04-2016 APECO1_RS19150 31ddcfe44c37fad82bdef106c899a106 225 PANTHER PTHR30487:SF0 2 217 4.3E-57 T 22-04-2016 APECO1_RS19150 31ddcfe44c37fad82bdef106c899a106 225 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 157 7.1E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APECO1_RS19150 31ddcfe44c37fad82bdef106c899a106 225 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 170 185 7.1E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APECO1_RS19150 31ddcfe44c37fad82bdef106c899a106 225 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 158 169 7.1E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APECO1_RS19150 31ddcfe44c37fad82bdef106c899a106 225 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 90 107 7.1E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APECO1_RS25405 986a928fceb003a0f7a1e508424319cb 91 SUPERFAMILY SSF69279 1 91 1.7E-34 T 22-04-2016 APECO1_RS25405 986a928fceb003a0f7a1e508424319cb 91 Gene3D G3DSA:2.40.10.210 23 91 2.2E-37 T 22-04-2016 APECO1_RS25405 986a928fceb003a0f7a1e508424319cb 91 Pfam PF13856 ATP-binding sugar transporter from pro-phage 1 88 7.5E-15 T 22-04-2016 IPR025601 ATP-binding sugar transporter-like protein APECO1_RS05300 a803190f1e23744b8c50f075a0013b42 75 Pfam PF07119 Protein of unknown function (DUF1375) 9 68 1.3E-9 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 APECO1_RS05810 90a2ddb354a017cef1930ce3c796c6de 122 ProDom PD077587 EA10 BINDING SINGLE-STRANDED DNA GENE STRAND GP03 PROPHAGE-DERIVED SSB LAMBDA 1 122 6.0E-67 T 22-04-2016 IPR024252 Protein of unknown function DUF2528 APECO1_RS05810 90a2ddb354a017cef1930ce3c796c6de 122 Pfam PF10800 Protein of unknown function (DUF2528) 16 119 6.1E-42 T 22-04-2016 IPR024252 Protein of unknown function DUF2528 APECO1_RS22190 92aeca7c1694b35b147f60c05a306060 103 PIRSF PIRSF039032 1 103 4.6E-36 T 22-04-2016 IPR009387 Toxin HigB-2 APECO1_RS05205 1379cad879029bd190160f9b1423a4f2 245 PANTHER PTHR36928 1 245 1.1E-115 T 22-04-2016 APECO1_RS05205 1379cad879029bd190160f9b1423a4f2 245 Gene3D G3DSA:3.20.20.140 1 237 3.3E-64 T 22-04-2016 APECO1_RS05205 1379cad879029bd190160f9b1423a4f2 245 SUPERFAMILY SSF89550 3 241 7.59E-64 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APECO1_RS05205 1379cad879029bd190160f9b1423a4f2 245 SMART SM00481 4 78 6.3E-21 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APECO1_RS05205 1379cad879029bd190160f9b1423a4f2 245 Pfam PF02811 PHP domain 5 80 1.9E-8 T 22-04-2016 IPR004013 PHP domain GO:0003824 APECO1_RS05205 1379cad879029bd190160f9b1423a4f2 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 52.228 T 22-04-2016 IPR023710 Probable phosphatase YcdX GO:0008270 APECO1_RS12280 6d7d675f418d05c29874944be89efc88 245 PANTHER PTHR30071 1 221 1.1E-88 T 22-04-2016 APECO1_RS12280 6d7d675f418d05c29874944be89efc88 245 Pfam PF01578 Cytochrome C assembly protein 9 184 1.3E-32 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APECO1_RS12280 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 3.3E-64 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12280 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.3E-64 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12280 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.3E-64 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12280 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.3E-64 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12280 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.3E-64 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12280 6d7d675f418d05c29874944be89efc88 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.3E-64 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS12280 6d7d675f418d05c29874944be89efc88 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 5.4E-85 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APECO1_RS15105 d65f4cfa0f514991b6451eb888180315 274 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 7 272 1.6E-92 T 22-04-2016 IPR019276 Protein of unkown function DUF2303 APECO1_RS13760 6519f100bac472d775c761935471a77f 267 SUPERFAMILY SSF89028 93 250 6.67E-13 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APECO1_RS13760 6519f100bac472d775c761935471a77f 267 Gene3D G3DSA:1.20.1200.10 95 248 1.3E-11 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APECO1_RS13760 6519f100bac472d775c761935471a77f 267 Pfam PF01923 Cobalamin adenosyltransferase 95 246 1.6E-12 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APECO1_RS13760 6519f100bac472d775c761935471a77f 267 PIRSF PIRSF012294 1 255 2.5E-112 T 22-04-2016 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00560 APECO1_RS05570 55c8bb77906274bacd60f5f89bcf7b6e 125 Pfam PF07233 Protein of unknown function (DUF1425) 34 124 1.7E-26 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 APECO1_RS24995 44d576bff35c3e0945d5e8363b0e4aa9 227 Pfam PF07670 Nucleoside recognition 85 178 4.2E-6 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APECO1_RS10510 abdabe55d84222d715e28472b1a18c22 211 PANTHER PTHR36964 1 208 2.8E-80 T 22-04-2016 APECO1_RS10510 abdabe55d84222d715e28472b1a18c22 211 Pfam PF01794 Ferric reductase like transmembrane component 48 161 6.2E-14 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain APECO1_RS10510 abdabe55d84222d715e28472b1a18c22 211 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 203 24.369 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 APECO1_RS05625 7e489ee518b43301a826140fb79add61 357 Pfam PF01757 Acyltransferase family 7 326 2.6E-22 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APECO1_RS23920 9e8306be66ff25fcc8ff02cb038c5961 115 Pfam PF12486 Type VI secretion system, EvfB, or VasL 2 104 3.1E-33 T 22-04-2016 IPR021069 ImpA, C-terminal APECO1_RS12850 541b3e205e8ada2489de717580ee8270 162 PANTHER PTHR36926:SF1 1 162 6.6E-84 T 22-04-2016 APECO1_RS12850 541b3e205e8ada2489de717580ee8270 162 Pfam PF02674 Colicin V production protein 4 141 6.6E-36 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 APECO1_RS12850 541b3e205e8ada2489de717580ee8270 162 PANTHER PTHR36926 1 162 6.6E-84 T 22-04-2016 APECO1_RS05010 12d246d8816a6232049dfe3015021a51 76 Pfam PF15939 Putative antitoxin of bacterial toxin-antitoxin system 1 76 1.1E-56 T 22-04-2016 IPR031853 Putative antitoxin YmcE APECO1_RS27880 cc75dcaf58a8b678e60da1a9cd88f2ea 139 SUPERFAMILY SSF47413 10 80 5.9E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS27880 cc75dcaf58a8b678e60da1a9cd88f2ea 139 Gene3D G3DSA:1.10.260.40 9 77 3.5E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS27880 cc75dcaf58a8b678e60da1a9cd88f2ea 139 SMART SM00530 14 73 5.2E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS27880 cc75dcaf58a8b678e60da1a9cd88f2ea 139 Pfam PF01381 Helix-turn-helix 29 73 2.6E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS24475 fa8d2b898c4f3d93679a5b6ca3574a90 212 Pfam PF04225 Opacity-associated protein A LysM-like domain 127 211 1.1E-34 T 22-04-2016 IPR007340 Opacity-associated protein A APECO1_RS24475 fa8d2b898c4f3d93679a5b6ca3574a90 212 Pfam PF08525 Opacity-associated protein A N-terminal motif 23 50 4.0E-9 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal APECO1_RS22370 2d0b7132078823aa49193912d70fce18 146 Pfam PF05656 Protein of unknown function (DUF805) 8 132 1.2E-21 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APECO1_RS22370 2d0b7132078823aa49193912d70fce18 146 PANTHER PTHR34980 1 146 3.4E-52 T 22-04-2016 APECO1_RS22370 2d0b7132078823aa49193912d70fce18 146 PANTHER PTHR34980:SF1 1 146 3.4E-52 T 22-04-2016 APECO1_RS14910 2990d25d0d0b4f52b6f04666e93549f6 442 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 3 122 5.0E-67 T 22-04-2016 IPR009826 DNA circulation, N-terminal APECO1_RS14910 2990d25d0d0b4f52b6f04666e93549f6 442 Pfam PF07157 DNA circularisation protein N-terminus 7 93 1.9E-34 T 22-04-2016 IPR009826 DNA circulation, N-terminal APECO1_RS03710 6277db442a34cc1fbe004145b650095e 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 5 327 8.0E-87 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APECO1_RS03710 6277db442a34cc1fbe004145b650095e 331 PANTHER PTHR30344:SF1 6 328 1.1E-99 T 22-04-2016 APECO1_RS03710 6277db442a34cc1fbe004145b650095e 331 PANTHER PTHR30344 6 328 1.1E-99 T 22-04-2016 APECO1_RS03710 6277db442a34cc1fbe004145b650095e 331 SUPERFAMILY SSF50974 3 292 9.15E-52 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal APECO1_RS03710 6277db442a34cc1fbe004145b650095e 331 Gene3D G3DSA:2.130.10.10 2 328 3.7E-80 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APECO1_RS03710 6277db442a34cc1fbe004145b650095e 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 56.1 T 22-04-2016 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APECO1_RS09335 46b4e3a43791683bb8a32928094b650a 295 SMART SM00465 34 112 3.5E-15 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APECO1_RS09335 46b4e3a43791683bb8a32928094b650a 295 SUPERFAMILY SSF82771 34 111 1.57E-10 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APECO1_RS09335 46b4e3a43791683bb8a32928094b650a 295 PANTHER PTHR30562:SF10 1 287 7.0E-201 T 22-04-2016 APECO1_RS09335 46b4e3a43791683bb8a32928094b650a 295 PANTHER PTHR30562 1 287 7.0E-201 T 22-04-2016 APECO1_RS18225 d1085cd555e31f30dc7869b9c267bdd5 167 Gene3D G3DSA:3.40.630.30 17 127 6.0E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS18225 d1085cd555e31f30dc7869b9c267bdd5 167 PANTHER PTHR23091 1 166 2.6E-20 T 22-04-2016 APECO1_RS18225 d1085cd555e31f30dc7869b9c267bdd5 167 SUPERFAMILY SSF55729 1 163 9.78E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS18225 d1085cd555e31f30dc7869b9c267bdd5 167 Pfam PF13508 Acetyltransferase (GNAT) domain 44 123 2.4E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS18225 d1085cd555e31f30dc7869b9c267bdd5 167 PANTHER PTHR23091:SF237 1 166 2.6E-20 T 22-04-2016 APECO1_RS02730 f99c1421b38e53ec1a8db1be448aaa6a 296 Pfam PF14488 Domain of unknown function (DUF4434) 21 186 1.7E-31 T 22-04-2016 IPR027849 Protein of unknown function DUF4434 APECO1_RS24350 2fcfad752433be9cb37e185faef55aec 109 Gene3D G3DSA:3.30.1660.10 43 109 3.1E-14 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS24350 2fcfad752433be9cb37e185faef55aec 109 SUPERFAMILY SSF159871 11 108 7.59E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS24350 2fcfad752433be9cb37e185faef55aec 109 Pfam PF07338 Protein of unknown function (DUF1471) 53 108 7.5E-15 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS04545 1f523bf398e6d2aa602d83e2bdb86f92 302 PIRSF PIRSF020481 1 302 1.6E-129 T 22-04-2016 IPR014507 Baseplate assembly protein J, predicted APECO1_RS04545 1f523bf398e6d2aa602d83e2bdb86f92 302 PANTHER PTHR35862:SF1 1 302 1.3E-130 T 22-04-2016 APECO1_RS04545 1f523bf398e6d2aa602d83e2bdb86f92 302 PANTHER PTHR35862 1 302 1.3E-130 T 22-04-2016 APECO1_RS04545 1f523bf398e6d2aa602d83e2bdb86f92 302 Pfam PF04865 Baseplate J-like protein 118 261 6.5E-25 T 22-04-2016 IPR006949 Baseplate protein J-like APECO1_RS19425 559483ea4a2d0697d4833b2eb3067b09 179 Pfam PF05137 Fimbrial assembly protein (PilN) 99 169 2.6E-8 T 22-04-2016 IPR007813 Fimbrial assembly PilN APECO1_RS22970 52bc1812478120f326f1cea9fd7db25e 90 Pfam PF11656 YjbD family (DUF3811) 3 90 1.5E-38 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD APECO1_RS22970 52bc1812478120f326f1cea9fd7db25e 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 3 90 3.0E-33 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD APECO1_RS17910 1da57a1ccaefba6c97c96bd842068997 783 SUPERFAMILY SSF48208 558 779 1.67E-85 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APECO1_RS17910 1da57a1ccaefba6c97c96bd842068997 783 SUPERFAMILY SSF48208 270 530 1.67E-85 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APECO1_RS17910 1da57a1ccaefba6c97c96bd842068997 783 Pfam PF01204 Trehalase 414 761 7.6E-11 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS17910 1da57a1ccaefba6c97c96bd842068997 783 PANTHER PTHR23403 547 753 1.4E-43 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS17910 1da57a1ccaefba6c97c96bd842068997 783 PANTHER PTHR23403 415 525 1.4E-43 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APECO1_RS23005 8cf289f13592534b7e739e9cc9e972e8 92 Pfam PF17089 Uncharacterised protein family 1 92 4.0E-63 T 22-04-2016 IPR031382 Uncharacterised protein YjbT APECO1_RS20000 14cfe6a3d3e68d767bd41c320f32a9b9 499 PANTHER PTHR11101:SF59 2 499 0.0 T 22-04-2016 APECO1_RS20000 14cfe6a3d3e68d767bd41c320f32a9b9 499 PANTHER PTHR11101 2 499 0.0 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APECO1_RS20000 14cfe6a3d3e68d767bd41c320f32a9b9 499 Pfam PF01384 Phosphate transporter family 30 488 1.4E-85 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APECO1_RS24190 3ba58aaf0b3c6c40d9e64b550c0fb0a7 104 ProDom PD069398 YJEN 1 102 4.0E-50 T 22-04-2016 IPR020528 Uncharacterised protein family YjeN APECO1_RS22765 03683ae3af5757d5425730d1bc00bd62 66 SUPERFAMILY SSF54285 1 66 6.98E-19 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APECO1_RS22765 03683ae3af5757d5425730d1bc00bd62 66 PANTHER PTHR34472 1 66 1.1E-25 T 22-04-2016 APECO1_RS22765 03683ae3af5757d5425730d1bc00bd62 66 Pfam PF02597 ThiS family 3 66 1.7E-17 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APECO1_RS22765 03683ae3af5757d5425730d1bc00bd62 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 66 1.4E-20 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis APECO1_RS22765 03683ae3af5757d5425730d1bc00bd62 66 Gene3D G3DSA:3.10.20.30 1 66 3.9E-26 T 22-04-2016 IPR012675 Beta-grasp domain APECO1_RS22765 03683ae3af5757d5425730d1bc00bd62 66 PANTHER PTHR34472:SF1 1 66 1.1E-25 T 22-04-2016 APECO1_RS19160 f7eedf512dcd2ecef19d0652fbafd476 64 PANTHER PTHR37424:SF1 2 60 2.7E-22 T 22-04-2016 APECO1_RS19160 f7eedf512dcd2ecef19d0652fbafd476 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 1.2E-14 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APECO1_RS19160 f7eedf512dcd2ecef19d0652fbafd476 64 PANTHER PTHR37424 2 60 2.7E-22 T 22-04-2016 APECO1_RS15305 f4b7687a49e4061c8c65ddda7b06c132 518 SUPERFAMILY SSF55931 4 514 9.81E-203 T 22-04-2016 APECO1_RS15305 f4b7687a49e4061c8c65ddda7b06c132 518 Pfam PF04262 Glutamate-cysteine ligase 9 380 8.9E-172 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APECO1_RS15305 f4b7687a49e4061c8c65ddda7b06c132 518 PANTHER PTHR38761 2 518 0.0 T 22-04-2016 APECO1_RS15305 f4b7687a49e4061c8c65ddda7b06c132 518 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 518 227.977 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APECO1_RS15305 f4b7687a49e4061c8c65ddda7b06c132 518 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 1.1E-276 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APECO1_RS05230 81e30ecf38cdb07c6e8dcfc6d04c85a1 129 Pfam PF10627 Curli assembly protein CsgE 28 128 4.1E-33 T 22-04-2016 IPR018900 Curli assembly protein CsgE APECO1_RS19805 1219a078c78538e18c80eded3bc7c0cc 133 SUPERFAMILY SSF53062 4 128 1.57E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS19805 1219a078c78538e18c80eded3bc7c0cc 133 Pfam PF03610 PTS system fructose IIA component 6 114 2.9E-18 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS19805 1219a078c78538e18c80eded3bc7c0cc 133 Gene3D G3DSA:3.40.50.510 4 127 3.8E-33 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APECO1_RS19805 1219a078c78538e18c80eded3bc7c0cc 133 PANTHER PTHR33799 4 126 1.0E-29 T 22-04-2016 APECO1_RS05170 dc7b6a020e4a1103c9309648ea480567 412 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 1 408 1.5E-195 T 22-04-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- APECO1_RS05170 dc7b6a020e4a1103c9309648ea480567 412 Gene3D G3DSA:3.90.550.10 46 292 1.6E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS05170 dc7b6a020e4a1103c9309648ea480567 412 SUPERFAMILY SSF53448 32 311 6.88E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APECO1_RS05170 dc7b6a020e4a1103c9309648ea480567 412 PANTHER PTHR10859 31 395 3.4E-185 T 22-04-2016 APECO1_RS05170 dc7b6a020e4a1103c9309648ea480567 412 PANTHER PTHR10859:SF92 31 395 3.4E-185 T 22-04-2016 APECO1_RS05170 dc7b6a020e4a1103c9309648ea480567 412 Pfam PF00535 Glycosyl transferase family 2 49 216 1.6E-38 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APECO1_RS21805 78c62fcac8e36984ab5075375bc2cc23 229 PANTHER PTHR34319 9 80 4.1E-20 T 22-04-2016 APECO1_RS21805 78c62fcac8e36984ab5075375bc2cc23 229 PANTHER PTHR34319:SF1 9 80 4.1E-20 T 22-04-2016 APECO1_RS12595 a89f1cd669b476f07bf9ab2fd6e9a53a 88 Pfam PF11183 Polymyxin resistance protein PmrD 1 82 5.5E-41 T 22-04-2016 APECO1_RS12595 a89f1cd669b476f07bf9ab2fd6e9a53a 88 ProDom PD028730 PMRD RESISTANCE POLYMYXIN B ANTIBIOTIC 1 82 9.0E-42 T 22-04-2016 IPR020146 Signal transduction protein PmrD APECO1_RS11350 4eeb763369efb2d05e80eeb85c0c2fab 426 Pfam PF04230 Polysaccharide pyruvyl transferase 13 356 4.3E-40 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase APECO1_RS11350 4eeb763369efb2d05e80eeb85c0c2fab 426 TIGRFAM TIGR04006 wcaK: colanic acid biosynthesis pyruvyl transferase WcaK 1 426 3.1E-282 T 22-04-2016 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK KEGG: 00231+2.-.-.-|UniPathway: UPA00936 APECO1_RS11350 4eeb763369efb2d05e80eeb85c0c2fab 426 PANTHER PTHR36836:SF1 1 84 4.6E-173 T 22-04-2016 APECO1_RS11350 4eeb763369efb2d05e80eeb85c0c2fab 426 PANTHER PTHR36836:SF1 104 426 4.6E-173 T 22-04-2016 APECO1_RS11350 4eeb763369efb2d05e80eeb85c0c2fab 426 PANTHER PTHR36836 1 84 4.6E-173 T 22-04-2016 APECO1_RS11350 4eeb763369efb2d05e80eeb85c0c2fab 426 PANTHER PTHR36836 104 426 4.6E-173 T 22-04-2016 APECO1_RS13205 f2b4f34ab1d7c7c649002d26b58c9887 58 Pfam PF05322 NINE Protein 1 58 1.9E-42 T 22-04-2016 IPR007986 NINE APECO1_RS21335 e48c3498685547481d38ac4b6ecf0af5 126 Pfam PF03899 ATP synthase I chain 13 108 1.0E-14 T 22-04-2016 IPR005598 ATP synthase protein I APECO1_RS12190 882b23dd4426ba4507b22747798f12cb 114 Pfam PF13989 YejG-like protein 4 108 1.5E-48 T 22-04-2016 IPR020489 Uncharacterised protein family YejG APECO1_RS12190 882b23dd4426ba4507b22747798f12cb 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 2.0E-62 T 22-04-2016 IPR020489 Uncharacterised protein family YejG APECO1_RS23725 16ebde9d03a9ef9927e3d3a5b0e69978 226 Pfam PF13280 WYL domain 151 196 3.3E-8 T 22-04-2016 IPR026881 WYL domain APECO1_RS23725 16ebde9d03a9ef9927e3d3a5b0e69978 226 Pfam PF08279 HTH domain 14 48 1.6E-4 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 APECO1_RS23725 16ebde9d03a9ef9927e3d3a5b0e69978 226 Gene3D G3DSA:1.10.10.10 10 48 2.5E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS17455 5bdaec02fb5a7e801d2c81806ddbaf51 244 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 9.1E-104 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 APECO1_RS17455 5bdaec02fb5a7e801d2c81806ddbaf51 244 PANTHER PTHR30572 3 227 3.4E-94 T 22-04-2016 APECO1_RS17455 5bdaec02fb5a7e801d2c81806ddbaf51 244 PANTHER PTHR30572:SF11 3 227 3.4E-94 T 22-04-2016 APECO1_RS17455 5bdaec02fb5a7e801d2c81806ddbaf51 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 91 205 5.2E-35 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APECO1_RS01515 a3ad26fa8d9a48c5ff24d165c6e973c5 841 SUPERFAMILY SSF49464 749 810 1.96E-5 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APECO1_RS01515 a3ad26fa8d9a48c5ff24d165c6e973c5 841 Pfam PF16967 Fimbrial, FimD or usher-like 283 350 1.3E-24 T 22-04-2016 IPR032636 Pilus assembly protein domain APECO1_RS01515 a3ad26fa8d9a48c5ff24d165c6e973c5 841 Gene3D G3DSA:2.60.40.1120 749 813 8.3E-5 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain APECO1_RS01515 a3ad26fa8d9a48c5ff24d165c6e973c5 841 Pfam PF15976 CS1-pili formation C-terminal 732 824 4.0E-28 T 22-04-2016 IPR031917 Pilus assembly protein, C-terminal domain APECO1_RS17625 f0a317cc9b5c6ea144ba2f3a064745d0 327 PANTHER PTHR30472 1 325 2.4E-92 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS17625 f0a317cc9b5c6ea144ba2f3a064745d0 327 SUPERFAMILY SSF81345 3 324 3.66E-75 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS17625 f0a317cc9b5c6ea144ba2f3a064745d0 327 Pfam PF01032 FecCD transport family 14 323 1.0E-86 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APECO1_RS17625 f0a317cc9b5c6ea144ba2f3a064745d0 327 Gene3D G3DSA:1.10.3470.10 2 324 2.2E-91 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APECO1_RS06900 ce76b5f87210d434995f6061904f6da7 109 Pfam PF05939 Phage minor tail protein 2 108 1.9E-35 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail APECO1_RS06700 3ef504f265688356711c241b1315927a 141 Gene3D G3DSA:1.10.3600.10 1 122 2.5E-49 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APECO1_RS06700 3ef504f265688356711c241b1315927a 141 Pfam PF06254 Putative bacterial toxin ydaT 48 101 1.9E-10 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APECO1_RS23820 e1bf210b057980da515ff485e67d340f 179 SUPERFAMILY SSF56672 46 178 1.89E-10 T 22-04-2016 APECO1_RS23820 e1bf210b057980da515ff485e67d340f 179 PANTHER PTHR34047 29 179 6.7E-31 T 22-04-2016 APECO1_RS17090 279502fd2a7a33b042f3a13561d893ef 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 2.9E-60 T 22-04-2016 IPR009610 CbtA toxin of type IV toxin-antitoxin system APECO1_RS06905 3895140d638858f3fe50dd84b1e5b53d 232 Pfam PF05100 Phage minor tail protein L 29 230 3.6E-98 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS06905 3895140d638858f3fe50dd84b1e5b53d 232 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 12 230 2.1E-99 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APECO1_RS20270 d75c1cc2e10539ecc1dd92b8577b7495 559 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 23 557 1.2E-246 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG APECO1_RS20270 d75c1cc2e10539ecc1dd92b8577b7495 559 Pfam PF11658 Cellulose biosynthesis protein BcsG 24 554 4.9E-236 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG APECO1_RS18015 6293c420dfad8d665967becfb8557b49 122 PANTHER PTHR34980:SF2 1 122 1.7E-36 T 22-04-2016 APECO1_RS18015 6293c420dfad8d665967becfb8557b49 122 PANTHER PTHR34980 1 122 1.7E-36 T 22-04-2016 APECO1_RS18015 6293c420dfad8d665967becfb8557b49 122 Pfam PF05656 Protein of unknown function (DUF805) 11 117 4.2E-35 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APECO1_RS06565 0eaae6c133c36015e628aeec8d02b746 171 Pfam PF13006 Insertion element 4 transposase N-terminal 19 109 6.9E-30 T 22-04-2016 IPR024473 Transposase, IS4, N-terminal APECO1_RS06565 0eaae6c133c36015e628aeec8d02b746 171 PANTHER PTHR37529 3 171 1.3E-25 T 22-04-2016 APECO1_RS07480 0f3507c9ea7d784276fcc288d9327f58 58 Pfam PF04181 Rtr1/RPAP2 family 8 54 2.5E-6 T 22-04-2016 IPR007308 Protein of unknown function DUF408 KEGG: 04660+3.1.3.16 APECO1_RS10795 bbb84646648b3ab1bfc960369defb6e5 67 Pfam PF13986 Domain of unknown function (DUF4224) 5 47 1.4E-17 T 22-04-2016 IPR025319 Domain of unknown function DUF4224 APECO1_RS09620 61eec32d8223fd90278987299f6608ac 60 SUPERFAMILY SSF103063 1 60 8.89E-32 T 22-04-2016 IPR015051 Protein YoaG APECO1_RS09620 61eec32d8223fd90278987299f6608ac 60 Gene3D G3DSA:3.30.160.220 1 60 2.5E-36 T 22-04-2016 IPR015051 Protein YoaG APECO1_RS09620 61eec32d8223fd90278987299f6608ac 60 Pfam PF08956 Domain of unknown function (DUF1869) 3 60 2.3E-32 T 22-04-2016 IPR015051 Protein YoaG APECO1_RS17795 d934ed45b581db52707f843f02dee8a9 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 4.4E-110 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APECO1_RS17795 d934ed45b581db52707f843f02dee8a9 273 Pfam PF02673 Bacitracin resistance protein BacA 10 266 2.9E-83 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APECO1_RS17795 d934ed45b581db52707f843f02dee8a9 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.781 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APECO1_RS17795 d934ed45b581db52707f843f02dee8a9 273 PANTHER PTHR30622:SF3 3 273 5.2E-153 T 22-04-2016 APECO1_RS17795 d934ed45b581db52707f843f02dee8a9 273 PANTHER PTHR30622 3 273 5.2E-153 T 22-04-2016 APECO1_RS15615 0856dc608b1d4b7dbbc35dee969c97f8 253 Pfam PF01975 Survival protein SurE 3 180 4.9E-56 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APECO1_RS15615 0856dc608b1d4b7dbbc35dee969c97f8 253 SUPERFAMILY SSF64167 1 246 3.4E-83 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APECO1_RS15615 0856dc608b1d4b7dbbc35dee969c97f8 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.3E-80 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APECO1_RS15615 0856dc608b1d4b7dbbc35dee969c97f8 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 40.359 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APECO1_RS15615 0856dc608b1d4b7dbbc35dee969c97f8 253 Gene3D G3DSA:3.40.1210.10 1 246 7.1E-85 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APECO1_RS15615 0856dc608b1d4b7dbbc35dee969c97f8 253 PANTHER PTHR30457 1 247 7.1E-101 T 22-04-2016 APECO1_RS17145 acdcea4f1dd823d8f9c14f0756457df1 401 Pfam PF05159 Capsule polysaccharide biosynthesis protein 83 389 3.4E-90 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APECO1_RS25580 0d43dc4baa73e3b6509a38dce2e94d82 214 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 1.9E-66 T 22-04-2016 IPR019305 Uncharacterised protein family Smp APECO1_RS07390 b9655b5ffd7215cad043331f09e78c76 49 Pfam PF03806 AbgT putative transporter family 12 46 1.3E-6 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 APECO1_RS21390 9f0be77d9917763c8c42a8459a9228f5 321 PANTHER PTHR32196:SF21 9 321 1.0E-140 T 22-04-2016 APECO1_RS21390 9f0be77d9917763c8c42a8459a9228f5 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 1.8E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS21390 9f0be77d9917763c8c42a8459a9228f5 321 PANTHER PTHR32196 9 321 1.0E-140 T 22-04-2016 APECO1_RS24140 8e45ccea21f648f7711eaa8914e50a61 48 Pfam PF08085 Entericidin EcnA/B family 23 43 1.6E-8 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 APECO1_RS11625 57dba5d027addb210b4b81a4ded2fcfe 182 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 168 3.5E-84 T 22-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 APECO1_RS20465 569cf1feac98281f8232aeb1a75b1cc6 274 SMART SM00047 127 256 9.6E-42 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APECO1_RS20465 569cf1feac98281f8232aeb1a75b1cc6 274 PANTHER PTHR40572 8 274 1.9E-96 T 22-04-2016 APECO1_RS20465 569cf1feac98281f8232aeb1a75b1cc6 274 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 142 267 2.0E-16 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APECO1_RS17925 666de33aa20f7f434185c78de1f3558a 167 Pfam PF01863 Protein of unknown function DUF45 93 149 3.3E-11 T 22-04-2016 IPR002725 Protein of unknown function DUF45 APECO1_RS17925 666de33aa20f7f434185c78de1f3558a 167 PANTHER PTHR30399 1 162 1.2E-112 T 22-04-2016 APECO1_RS17925 666de33aa20f7f434185c78de1f3558a 167 PANTHER PTHR30399:SF4 1 162 1.2E-112 T 22-04-2016 APECO1_RS13145 c21be0384f2213a61292cee960bdd726 180 Pfam PF10549 ORF11CD3 domain 125 176 3.8E-22 T 22-04-2016 IPR018877 Bacteriophage P22, Orf201, C-terminal APECO1_RS13145 c21be0384f2213a61292cee960bdd726 180 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 25 113 1.2E-20 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family APECO1_RS13145 c21be0384f2213a61292cee960bdd726 180 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 16 118 1.6E-24 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family APECO1_RS24700 bbf79b09292be293fc699c9f3e50bf0a 138 Pfam PF06877 Regulator of ribonuclease activity B 12 113 1.5E-33 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain APECO1_RS24700 bbf79b09292be293fc699c9f3e50bf0a 138 Gene3D G3DSA:3.30.70.970 1 124 1.7E-55 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain APECO1_RS24700 bbf79b09292be293fc699c9f3e50bf0a 138 SUPERFAMILY SSF89946 2 122 7.45E-43 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain APECO1_RS24700 bbf79b09292be293fc699c9f3e50bf0a 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.689 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B APECO1_RS24700 bbf79b09292be293fc699c9f3e50bf0a 138 PIRSF PIRSF018193 1 138 2.0E-67 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B APECO1_RS23880 581ce526f2e3b67fcdab1b9198a31120 234 Pfam PF02441 Flavoprotein 99 140 1.2E-5 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APECO1_RS23880 581ce526f2e3b67fcdab1b9198a31120 234 Gene3D G3DSA:3.40.50.1950 100 136 1.8E-4 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APECO1_RS23880 581ce526f2e3b67fcdab1b9198a31120 234 SUPERFAMILY SSF52507 24 134 1.83E-8 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APECO1_RS05070 01f51658daa54b6fce36cc556c007d30 75 Pfam PF13993 YccJ-like protein 9 75 2.2E-38 T 22-04-2016 IPR025600 YccJ-like protein APECO1_RS11115 00bebc4dfed8242941b472c03b243e15 227 Gene3D G3DSA:3.40.1420.10 110 223 1.7E-18 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 APECO1_RS11115 00bebc4dfed8242941b472c03b243e15 227 SUPERFAMILY SSF89872 121 203 4.71E-5 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 APECO1_RS07690 2fb080832701c96752132cab5b2a0043 98 Pfam PF05939 Phage minor tail protein 2 97 1.8E-27 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail APECO1_RS17020 b620d5daeecef94f10b035177a677beb 246 Pfam PF11726 Protein of unknown function (DUF3296) 17 233 1.8E-40 T 22-04-2016 IPR021723 Inovirus Gp2 APECO1_RS17750 280c434e28697ffffce7b4560bc6de3f 209 Pfam PF07290 Protein of unknown function (DUF1449) 8 202 9.1E-75 T 22-04-2016 IPR010840 Protein of unknown function DUF1449 APECO1_RS18775 105503ec0a857ae7f390413c9c7c874c 59 Pfam PF10831 Protein of unknown function (DUF2556) 1 53 5.0E-35 T 22-04-2016 IPR022540 Protein of unknown function DUF2556 APECO1_RS18775 105503ec0a857ae7f390413c9c7c874c 59 ProDom PD052549 YHDU TRANSMEMBRANE MEMBRANE PERIPLASMIC 1 53 6.0E-14 T 22-04-2016 IPR022540 Protein of unknown function DUF2556 APECO1_RS17185 7f98a20788cdfcfc8c7152286b597af0 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 106 131 7.3E-37 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS17185 7f98a20788cdfcfc8c7152286b597af0 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 140 164 7.3E-37 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS17185 7f98a20788cdfcfc8c7152286b597af0 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 7.3E-37 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS17185 7f98a20788cdfcfc8c7152286b597af0 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 7.3E-37 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS17185 7f98a20788cdfcfc8c7152286b597af0 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 63 85 7.3E-37 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS17185 7f98a20788cdfcfc8c7152286b597af0 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 32 53 7.3E-37 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS17185 7f98a20788cdfcfc8c7152286b597af0 258 PIRSF PIRSF006648 5 253 6.7E-14 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APECO1_RS17185 7f98a20788cdfcfc8c7152286b597af0 258 Pfam PF01061 ABC-2 type transporter 14 218 5.0E-18 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APECO1_RS21180 b30ce09bc7c4b1d35e8b7ca02a233192 24 Pfam PF08053 Tryptophanase operon leader peptide 1 24 2.5E-20 T 22-04-2016 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 APECO1_RS21180 b30ce09bc7c4b1d35e8b7ca02a233192 24 TIGRFAM TIGR02616 tnaC_leader: tryptophanase leader peptide 3 24 2.8E-12 T 22-04-2016 IPR012620 Tryptophanese operon leader peptide GO:0031554|GO:0031556 APECO1_RS19220 d846b3446c74769630da84764ee91886 196 Gene3D G3DSA:3.10.50.40 2 80 5.2E-16 T 22-04-2016 APECO1_RS19220 d846b3446c74769630da84764ee91886 196 Gene3D G3DSA:3.10.50.40 126 141 5.2E-16 T 22-04-2016 APECO1_RS19220 d846b3446c74769630da84764ee91886 196 SUPERFAMILY SSF54534 2 140 2.75E-33 T 22-04-2016 APECO1_RS19220 d846b3446c74769630da84764ee91886 196 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 1.6E-9 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APECO1_RS19220 d846b3446c74769630da84764ee91886 196 PANTHER PTHR10516:SF316 1 83 2.1E-71 T 22-04-2016 APECO1_RS19220 d846b3446c74769630da84764ee91886 196 PANTHER PTHR10516:SF316 129 195 2.1E-71 T 22-04-2016 APECO1_RS19220 d846b3446c74769630da84764ee91886 196 PANTHER PTHR10516 1 83 2.1E-71 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APECO1_RS19220 d846b3446c74769630da84764ee91886 196 PANTHER PTHR10516 129 195 2.1E-71 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APECO1_RS15110 fac167644b4ad6317fc12e4cedef748a 174 SUPERFAMILY SSF109604 1 173 1.49E-38 T 22-04-2016 APECO1_RS15110 fac167644b4ad6317fc12e4cedef748a 174 Gene3D G3DSA:1.10.3210.10 1 173 3.2E-50 T 22-04-2016 IPR006674 HD domain APECO1_RS23785 a40713107c3b3e382f96811114f2aec9 69 SUPERFAMILY SSF46689 11 59 1.43E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23785 a40713107c3b3e382f96811114f2aec9 69 PANTHER PTHR11019 11 58 3.8E-13 T 22-04-2016 APECO1_RS23785 a40713107c3b3e382f96811114f2aec9 69 Gene3D G3DSA:1.10.10.60 7 60 6.1E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APECO1_RS23785 a40713107c3b3e382f96811114f2aec9 69 PANTHER PTHR11019:SF84 11 58 3.8E-13 T 22-04-2016 APECO1_RS01305 c5b109b48bb78d7a79e13153d7bb7f1c 165 PANTHER PTHR36966:SF1 1 164 3.1E-40 T 22-04-2016 APECO1_RS01305 c5b109b48bb78d7a79e13153d7bb7f1c 165 SUPERFAMILY SSF143422 1 125 7.32E-30 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APECO1_RS01305 c5b109b48bb78d7a79e13153d7bb7f1c 165 SMART SM01321 9 119 4.8E-27 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APECO1_RS01305 c5b109b48bb78d7a79e13153d7bb7f1c 165 Gene3D G3DSA:3.30.70.1290 10 123 8.0E-9 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APECO1_RS01305 c5b109b48bb78d7a79e13153d7bb7f1c 165 PANTHER PTHR36966 1 164 3.1E-40 T 22-04-2016 APECO1_RS09770 7f0d0bca562eeaf47b0b6aa2a0147d5b 95 Pfam PF13974 YebO-like protein 16 95 1.6E-32 T 22-04-2016 IPR025594 YebO-like protein APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 112 132 7.39E-82 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 51 75 7.39E-82 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 147 172 7.39E-82 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 232 251 7.39E-82 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 86 107 7.39E-82 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 262 285 7.39E-82 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 179 202 7.39E-82 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 24 46 7.39E-82 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 SUPERFAMILY SSF111364 29 286 1.1E-79 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 Gene3D G3DSA:2.40.230.20 29 286 1.2E-88 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS22470 0baff22a7707b086f9426e9430bc845f 286 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 29 286 1.7E-69 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APECO1_RS15590 7ae9bfb08fec1dcda345621f5ae6cd4f 347 SUPERFAMILY SSF56281 66 289 8.65E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS15590 7ae9bfb08fec1dcda345621f5ae6cd4f 347 Gene3D G3DSA:3.60.15.10 59 281 7.7E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS15590 7ae9bfb08fec1dcda345621f5ae6cd4f 347 SMART SM00849 81 256 1.0E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS15590 7ae9bfb08fec1dcda345621f5ae6cd4f 347 Pfam PF00753 Metallo-beta-lactamase superfamily 82 241 1.1E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS09545 834628c6391cbb7c33fde8ac328b6104 248 PANTHER PTHR38776 4 248 6.0E-93 T 22-04-2016 APECO1_RS09545 834628c6391cbb7c33fde8ac328b6104 248 Pfam PF06629 MltA-interacting protein MipA 28 248 3.5E-52 T 22-04-2016 IPR010583 MltA-interacting MipA APECO1_RS25410 143573afa675aeb1a1fb4c8a6d18851b 192 Pfam PF06763 Prophage minor tail protein Z (GPZ) 1 192 1.0E-73 T 22-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APECO1_RS25410 143573afa675aeb1a1fb4c8a6d18851b 192 PIRSF PIRSF004395 1 192 1.4E-87 T 22-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APECO1_RS06645 ce82713da2763efb1eadd41790172833 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 247 24.199 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 APECO1_RS06645 ce82713da2763efb1eadd41790172833 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 2.6E-104 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 APECO1_RS04560 56606e8961a7616815104afa4e175853 175 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 40 175 3.3E-39 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly APECO1_RS16610 0576427931e92cbef4f50737f72176b4 62 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 4 59 1.0E-18 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APECO1_RS16610 0576427931e92cbef4f50737f72176b4 62 Gene3D G3DSA:3.30.540.10 3 59 1.7E-18 T 22-04-2016 APECO1_RS16610 0576427931e92cbef4f50737f72176b4 62 SUPERFAMILY SSF56655 2 59 8.24E-13 T 22-04-2016 APECO1_RS16610 0576427931e92cbef4f50737f72176b4 62 PANTHER PTHR30447 2 59 1.2E-24 T 22-04-2016 APECO1_RS16610 0576427931e92cbef4f50737f72176b4 62 PANTHER PTHR30447:SF0 2 59 1.2E-24 T 22-04-2016 APECO1_RS03125 0754593e315c348cebd3f7d40cdf821f 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 3.5E-53 T 22-04-2016 IPR009912 Zinc-ribbon containing domain APECO1_RS18040 5b22197db851a76d633308711121c4a1 443 PANTHER PTHR35334 11 443 0.0 T 22-04-2016 APECO1_RS18040 5b22197db851a76d633308711121c4a1 443 PANTHER PTHR35334:SF4 11 443 0.0 T 22-04-2016 APECO1_RS01495 6cfeb758a2d8685d750e1cac80c5ae05 204 Pfam PF07274 Protein of unknown function (DUF1440) 26 181 2.3E-54 T 22-04-2016 IPR009898 Protein of unknown function DUF1440 APECO1_RS11725 0b50976ce9a8651de24e10d444eaa098 94 Gene3D G3DSA:3.40.50.270 2 93 2.0E-30 T 22-04-2016 APECO1_RS11725 0b50976ce9a8651de24e10d444eaa098 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 83 1.4E-10 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS11725 0b50976ce9a8651de24e10d444eaa098 94 PANTHER PTHR33843 1 94 3.9E-71 T 22-04-2016 APECO1_RS11725 0b50976ce9a8651de24e10d444eaa098 94 PANTHER PTHR33843:SF6 1 94 3.9E-71 T 22-04-2016 APECO1_RS11725 0b50976ce9a8651de24e10d444eaa098 94 SUPERFAMILY SSF52794 3 92 4.97E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APECO1_RS20290 5d71fd051cdbde2e2a3d1e6e265a2158 55 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 21 55 1.9E-25 T 22-04-2016 IPR025253 Type I toxin-antitoxin system, toxin Ldr APECO1_RS05775 2f82f9d23e6d98e310678c0e14489330 63 Pfam PF07131 Protein of unknown function (DUF1382) 1 61 8.3E-42 T 22-04-2016 IPR009814 Bacteriophage lambda, Xis (Q38267) APECO1_RS21940 ac2c9754009c0175b55045aa01e09970 89 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 25.479 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APECO1_RS21940 ac2c9754009c0175b55045aa01e09970 89 PANTHER PTHR33162 1 89 1.2E-23 T 22-04-2016 APECO1_RS21940 ac2c9754009c0175b55045aa01e09970 89 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 3.8E-21 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APECO1_RS21940 ac2c9754009c0175b55045aa01e09970 89 Pfam PF02416 mttA/Hcf106 family 4 55 2.0E-15 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APECO1_RS25345 9039280c2ef1ddd72dc2b3d08bc9d04e 165 Pfam PF10721 Protein of unknown function (DUF2514) 5 159 4.8E-37 T 22-04-2016 IPR019659 Protein of unknown function DUF2514 APECO1_RS08005 cd4c97d080799c996b64f854138dbafa 313 PANTHER PTHR30193:SF5 29 307 2.6E-106 T 22-04-2016 APECO1_RS08005 cd4c97d080799c996b64f854138dbafa 313 PANTHER PTHR30193 29 307 2.6E-106 T 22-04-2016 APECO1_RS08005 cd4c97d080799c996b64f854138dbafa 313 Gene3D G3DSA:1.10.3720.10 78 307 1.7E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS08005 cd4c97d080799c996b64f854138dbafa 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 307 1.7E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS08005 cd4c97d080799c996b64f854138dbafa 313 SUPERFAMILY SSF161098 33 307 4.71E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APECO1_RS13290 ea97d1489fca5d2c1fd820b750da2b70 98 ProDom PD066202 ABC2 ATP-BINDING GP39 HKAJ GP46 GENE ABC ANTI-RECBCD TRANSPORTER 1 98 6.0E-52 T 22-04-2016 IPR020500 Bacteriophage P22, anti-RecBCD protein 2 APECO1_RS13290 ea97d1489fca5d2c1fd820b750da2b70 98 Pfam PF11043 Protein of unknown function (DUF2856) 1 98 3.1E-62 T 22-04-2016 IPR020500 Bacteriophage P22, anti-RecBCD protein 2 APECO1_RS06845 0141e7bf453bfa87572382c501c61775 501 Gene3D G3DSA:3.90.226.10 256 294 1.3E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS06845 0141e7bf453bfa87572382c501c61775 501 Gene3D G3DSA:3.90.226.10 76 189 1.3E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS06845 0141e7bf453bfa87572382c501c61775 501 Pfam PF01343 Peptidase family S49 146 293 9.4E-35 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APECO1_RS06845 0141e7bf453bfa87572382c501c61775 501 PANTHER PTHR33209 54 428 1.1E-75 T 22-04-2016 APECO1_RS06845 0141e7bf453bfa87572382c501c61775 501 SUPERFAMILY SSF52096 67 193 5.64E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS06845 0141e7bf453bfa87572382c501c61775 501 SUPERFAMILY SSF52096 224 282 5.64E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APECO1_RS06845 0141e7bf453bfa87572382c501c61775 501 PANTHER PTHR33209:SF4 54 428 1.1E-75 T 22-04-2016 APECO1_RS10570 822a1b86592d8c5e0ab88fdcb557ce08 1079 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 158 231 7.7E-24 T 22-04-2016 IPR013491 Caudovirus, tape measure, N-terminal APECO1_RS10570 822a1b86592d8c5e0ab88fdcb557ce08 1079 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 861 932 7.9E-15 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS10570 822a1b86592d8c5e0ab88fdcb557ce08 1079 Pfam PF06120 Tail length tape measure protein 395 689 3.6E-101 T 22-04-2016 IPR009302 Tail length tape measure APECO1_RS10570 822a1b86592d8c5e0ab88fdcb557ce08 1079 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 724 1042 5.7E-67 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 Pfam PF02108 Flagellar assembly protein FliH 96 219 1.2E-40 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PANTHER PTHR34982:SF1 3 222 1.0E-74 T 22-04-2016 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PRINTS PR01003 Flagellar assembly protein FliH signature 53 75 2.6E-119 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PRINTS PR01003 Flagellar assembly protein FliH signature 184 200 2.6E-119 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PRINTS PR01003 Flagellar assembly protein FliH signature 133 155 2.6E-119 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PRINTS PR01003 Flagellar assembly protein FliH signature 156 183 2.6E-119 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PRINTS PR01003 Flagellar assembly protein FliH signature 76 94 2.6E-119 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PRINTS PR01003 Flagellar assembly protein FliH signature 95 114 2.6E-119 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PRINTS PR01003 Flagellar assembly protein FliH signature 5 24 2.6E-119 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PRINTS PR01003 Flagellar assembly protein FliH signature 115 132 2.6E-119 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PRINTS PR01003 Flagellar assembly protein FliH signature 201 226 2.6E-119 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APECO1_RS10360 b3480988c76d92ca424dc12bfd5f845c 228 PANTHER PTHR34982 3 222 1.0E-74 T 22-04-2016 APECO1_RS02950 1a3d18fa4a35b13df73e9a69b4707a58 187 PIRSF PIRSF000239 1 187 2.7E-50 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APECO1_RS02950 1a3d18fa4a35b13df73e9a69b4707a58 187 SUPERFAMILY SSF52833 1 186 6.41E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02950 1a3d18fa4a35b13df73e9a69b4707a58 187 PANTHER PTHR10681:SF121 1 187 2.8E-94 T 22-04-2016 APECO1_RS02950 1a3d18fa4a35b13df73e9a69b4707a58 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.7E-103 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APECO1_RS02950 1a3d18fa4a35b13df73e9a69b4707a58 187 PANTHER PTHR10681 1 187 2.8E-94 T 22-04-2016 APECO1_RS02950 1a3d18fa4a35b13df73e9a69b4707a58 187 Gene3D G3DSA:3.40.30.10 4 183 2.4E-59 T 22-04-2016 IPR012336 Thioredoxin-like fold APECO1_RS02950 1a3d18fa4a35b13df73e9a69b4707a58 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APECO1_RS02950 1a3d18fa4a35b13df73e9a69b4707a58 187 Pfam PF00578 AhpC/TSA family 10 133 5.8E-33 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APECO1_RS16905 c5200c0bbf5374855c09f2beac47b49c 78 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 22 66 2.4E-9 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) APECO1_RS04725 a165b9a1483ef48e8d6a6958a2d9c239 234 Pfam PF04288 MukE-like family 10 230 8.1E-126 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 APECO1_RS04725 a165b9a1483ef48e8d6a6958a2d9c239 234 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 234 48.637 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 SMART SM00267 269 442 1.8E-53 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 Pfam PF17158 Membrane-associated sensor, integral membrane domain 40 274 4.0E-77 T 22-04-2016 IPR033424 Membrane-associated sensor domain APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 PANTHER PTHR10799:SF750 312 441 8.9E-18 T 22-04-2016 APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 PANTHER PTHR10799:SF750 85 237 8.9E-18 T 22-04-2016 APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 279 441 3.4E-36 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 Gene3D G3DSA:3.30.70.270 283 441 2.9E-40 T 22-04-2016 APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 PANTHER PTHR10799 312 441 8.9E-18 T 22-04-2016 APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 PANTHER PTHR10799 85 237 8.9E-18 T 22-04-2016 APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 SUPERFAMILY SSF55073 286 441 2.82E-36 T 22-04-2016 IPR029787 Nucleotide cyclase APECO1_RS09560 6f57dbafaa0b917e92504b33ce71221f 444 Pfam PF00990 Diguanylate cyclase, GGDEF domain 281 438 2.4E-44 T 22-04-2016 IPR000160 GGDEF domain APECO1_RS18575 0d552860d03d7427ddfb58c6c723f3b7 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 5.1E-48 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 APECO1_RS18575 0d552860d03d7427ddfb58c6c723f3b7 132 PANTHER PTHR39579 1 132 7.1E-54 T 22-04-2016 APECO1_RS18575 0d552860d03d7427ddfb58c6c723f3b7 132 PIRSF PIRSF006318 1 132 1.0E-51 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 APECO1_RS00985 a3120a6aa5e4b528e4f2e1ca513e549c 129 SUPERFAMILY SSF54593 3 128 4.83E-32 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APECO1_RS00985 a3120a6aa5e4b528e4f2e1ca513e549c 129 Gene3D G3DSA:3.10.180.10 3 128 3.4E-36 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APECO1_RS00985 a3120a6aa5e4b528e4f2e1ca513e549c 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 4.5E-23 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APECO1_RS13015 be8787ea42e3b54011d7045f955e7b16 310 PANTHER PTHR30520 20 309 2.8E-219 T 22-04-2016 APECO1_RS13015 be8787ea42e3b54011d7045f955e7b16 310 Pfam PF01226 Formate/nitrite transporter 40 276 2.0E-40 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APECO1_RS13015 be8787ea42e3b54011d7045f955e7b16 310 Gene3D G3DSA:1.20.1080.10 54 281 5.1E-47 T 22-04-2016 IPR023271 Aquaporin-like APECO1_RS13015 be8787ea42e3b54011d7045f955e7b16 310 PANTHER PTHR30520:SF2 20 309 2.8E-219 T 22-04-2016 APECO1_RS24205 7ef066d04a1813216dd104af27779c69 322 Pfam PF02666 Phosphatidylserine decarboxylase 63 282 1.8E-59 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APECO1_RS24205 7ef066d04a1813216dd104af27779c69 322 PANTHER PTHR10067 1 294 1.9E-122 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APECO1_RS24205 7ef066d04a1813216dd104af27779c69 322 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 286 2.7E-102 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APECO1_RS24205 7ef066d04a1813216dd104af27779c69 322 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 51.248 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APECO1_RS17070 1595c12e1a5313aac7bdd14e5bf6e99d 161 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 64 161 2.0E-54 T 22-04-2016 IPR004914 Antirestriction protein APECO1_RS17070 1595c12e1a5313aac7bdd14e5bf6e99d 161 Pfam PF03230 Antirestriction protein 66 161 9.8E-37 T 22-04-2016 IPR004914 Antirestriction protein APECO1_RS09600 9ecc1d8c1c619afd50682cff8e257c4f 84 PANTHER PTHR38008 1 84 4.1E-22 T 22-04-2016 APECO1_RS09600 9ecc1d8c1c619afd50682cff8e257c4f 84 Pfam PF03891 Domain of unknown function (DUF333) 32 78 9.8E-19 T 22-04-2016 IPR005590 Protein of unknown function DUF333 APECO1_RS06865 94555e8e040407d3803dce092df6bcec 117 SUPERFAMILY SSF69279 1 117 8.5E-56 T 22-04-2016 APECO1_RS06865 94555e8e040407d3803dce092df6bcec 117 Pfam PF05354 Phage Head-Tail Attachment 1 117 1.0E-52 T 22-04-2016 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 APECO1_RS06865 94555e8e040407d3803dce092df6bcec 117 ProDom PD031229 PROPHAGE HEAD-TAIL JOINING CAPSID TAIL ATTACHMENT MINOR GIFSY-1 FII CP-933X 1 117 3.0E-61 T 22-04-2016 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 APECO1_RS06865 94555e8e040407d3803dce092df6bcec 117 Gene3D G3DSA:2.40.10.180 1 116 1.5E-48 T 22-04-2016 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 APECO1_RS06710 eec6bf68b325ff2df4e6f48e201fc9b0 140 Pfam PF06163 Bacterial protein of unknown function (DUF977) 2 135 1.0E-31 T 22-04-2016 IPR010382 Protein of unknown function DUF977 APECO1_RS05935 8734399541c1d72c283018b9598d9a09 153 Pfam PF03245 Bacteriophage Rz lysis protein 30 153 6.6E-49 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 APECO1_RS20610 acf1c175b982a03ecd877fb3c8e5bb5b 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 117 5.9E-33 T 22-04-2016 IPR021230 Protein of unknown function DUF2810 APECO1_RS26385 626f19019b5048815552e96a1ac9bfcd 45 SUPERFAMILY SSF54060 1 45 7.06E-8 T 22-04-2016 APECO1_RS26385 626f19019b5048815552e96a1ac9bfcd 45 Gene3D G3DSA:3.90.540.10 1 45 8.9E-11 T 22-04-2016 IPR024622 Colicin/pyocin, DNase domain GO:0004519 APECO1_RS13125 9927ab9a5f78dbc0f0b7df33eee7471b 732 Pfam PF16510 Phage P22-like portal protein 17 695 3.4E-223 T 22-04-2016 IPR032427 Phage P22-like portal protein APECO1_RS05905 3b8efebebfc15e9786634b2dcc2ff5e0 120 Gene3D G3DSA:3.30.1330.70 2 118 2.7E-44 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS05905 3b8efebebfc15e9786634b2dcc2ff5e0 120 SUPERFAMILY SSF103084 2 117 3.27E-38 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS05905 3b8efebebfc15e9786634b2dcc2ff5e0 120 PIRSF PIRSF001007 1 120 2.1E-51 T 22-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 APECO1_RS05905 3b8efebebfc15e9786634b2dcc2ff5e0 120 Pfam PF05866 Endodeoxyribonuclease RusA 9 115 5.9E-23 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APECO1_RS19730 aa85ee73387dd9c7037a4ced0ae55980 146 ProDom PD059127 YHHA MEMBRANE OUTER PRECURSOR SIGNAL STY4259 ORFQ ECS4294 1 146 4.0E-47 T 22-04-2016 IPR020158 Protein of unknown function DUF2756 APECO1_RS19730 aa85ee73387dd9c7037a4ced0ae55980 146 Pfam PF10956 Protein of unknown function (DUF2756) 1 105 3.9E-53 T 22-04-2016 IPR020158 Protein of unknown function DUF2756 APECO1_RS05215 4fbea61de787f971137d5e1ca2322997 163 Pfam PF06496 Protein of unknown function (DUF1097) 8 142 9.6E-39 T 22-04-2016 IPR009476 Protein of unknown function DUF1097 APECO1_RS02635 3b054311215ec9e50993cb6ec70cb3e8 419 Gene3D G3DSA:3.90.1700.10 250 416 2.5E-81 T 22-04-2016 APECO1_RS02635 3b054311215ec9e50993cb6ec70cb3e8 419 Gene3D G3DSA:3.90.1710.10 100 248 2.9E-76 T 22-04-2016 APECO1_RS02635 3b054311215ec9e50993cb6ec70cb3e8 419 Pfam PF06545 Protein of unknown function (DUF1116) 87 302 1.5E-99 T 22-04-2016 IPR009499 Protein of unknown function DUF1116 APECO1_RS02635 3b054311215ec9e50993cb6ec70cb3e8 419 Gene3D G3DSA:1.10.10.660 39 99 8.5E-39 T 22-04-2016 IPR024033 Uncharacterised domain, YlbE APECO1_RS12420 aa2436978b05bf43bfd189a6c7cac1b8 258 PIRSF PIRSF012281 1 258 5.1E-128 T 22-04-2016 IPR012039 Uncharacterised conserved protein UCP012281 APECO1_RS12420 aa2436978b05bf43bfd189a6c7cac1b8 258 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 199 244 2.4E-18 T 22-04-2016 IPR019220 Domain of unknown function DUF2135 APECO1_RS21905 4a887fae9ed64240cc88520962dfbd8c 209 SUPERFAMILY SSF51569 3 202 1.43E-57 T 22-04-2016 APECO1_RS21905 4a887fae9ed64240cc88520962dfbd8c 209 Gene3D G3DSA:3.20.20.70 4 206 2.0E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APECO1_RS21905 4a887fae9ed64240cc88520962dfbd8c 209 Pfam PF01081 KDPG and KHG aldolase 6 183 6.4E-31 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APECO1_RS21905 4a887fae9ed64240cc88520962dfbd8c 209 PANTHER PTHR30246 1 202 8.5E-54 T 22-04-2016 APECO1_RS21905 4a887fae9ed64240cc88520962dfbd8c 209 PANTHER PTHR30246:SF1 1 202 8.5E-54 T 22-04-2016 APECO1_RS19290 793377289e6548327b94e3345d688f44 200 SUPERFAMILY SSF140931 41 195 6.28E-29 T 22-04-2016 IPR003812 Fido domain APECO1_RS19290 793377289e6548327b94e3345d688f44 200 Gene3D G3DSA:1.10.3290.10 11 196 1.4E-53 T 22-04-2016 IPR003812 Fido domain APECO1_RS19290 793377289e6548327b94e3345d688f44 200 PANTHER PTHR39560:SF1 1 200 6.5E-63 T 22-04-2016 APECO1_RS19290 793377289e6548327b94e3345d688f44 200 PANTHER PTHR39560 1 200 6.5E-63 T 22-04-2016 APECO1_RS19290 793377289e6548327b94e3345d688f44 200 Pfam PF02661 Fic/DOC family 58 152 5.7E-14 T 22-04-2016 IPR003812 Fido domain APECO1_RS14620 f1d94edddd91992a1becb786bf234585 90 PANTHER PTHR35462 1 90 5.8E-59 T 22-04-2016 APECO1_RS14620 f1d94edddd91992a1becb786bf234585 90 PANTHER PTHR35462:SF1 1 90 5.8E-59 T 22-04-2016 APECO1_RS14620 f1d94edddd91992a1becb786bf234585 90 PIRSF PIRSF034456 1 89 3.0E-51 T 22-04-2016 IPR017028 Uncharacterised conserved protein UCP034456 APECO1_RS14620 f1d94edddd91992a1becb786bf234585 90 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 7 82 4.3E-10 T 22-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein APECO1_RS07625 9a4ac0182c19e0efe6ad2d8083e83d3a 468 Pfam PF13264 Domain of unknown function (DUF4055) 249 385 7.5E-46 T 22-04-2016 IPR025129 Domain of unknown function DUF4055 APECO1_RS13245 6746a0dcebc3d77f68e0b0a38486880c 97 Pfam PF05269 Bacteriophage CII protein 1 90 1.2E-47 T 22-04-2016 IPR007933 Transcription activator CII GO:0003677|GO:0006355 APECO1_RS13245 6746a0dcebc3d77f68e0b0a38486880c 97 SUPERFAMILY SSF47413 6 80 1.23E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS13245 6746a0dcebc3d77f68e0b0a38486880c 97 Gene3D G3DSA:1.10.8.320 1 80 1.7E-40 T 22-04-2016 APECO1_RS13105 1afcd319be3585294d84e4e2fcc7db7b 153 Pfam PF11650 P22 tail accessory factor 2 150 1.8E-38 T 22-04-2016 IPR020362 Tail accessory factor GP4 APECO1_RS13105 1afcd319be3585294d84e4e2fcc7db7b 153 ProDom PD097046 DNA STABILIZATION GP4 PACKAGED LATE HEAD GENE SEQUENCING DIRECT COMPLETION 4 145 2.0E-27 T 22-04-2016 IPR020362 Tail accessory factor GP4 APECO1_RS09165 7efbdc5336620ffc727d58cdffb6c285 237 PANTHER PTHR33121:SF2 1 237 4.3E-155 T 22-04-2016 APECO1_RS09165 7efbdc5336620ffc727d58cdffb6c285 237 SUPERFAMILY SSF141868 13 230 5.62E-12 T 22-04-2016 IPR001633 EAL domain APECO1_RS09165 7efbdc5336620ffc727d58cdffb6c285 237 PANTHER PTHR33121 1 237 4.3E-155 T 22-04-2016 APECO1_RS09165 7efbdc5336620ffc727d58cdffb6c285 237 Pfam PF00563 EAL domain 13 222 3.1E-10 T 22-04-2016 IPR001633 EAL domain APECO1_RS09165 7efbdc5336620ffc727d58cdffb6c285 237 Gene3D G3DSA:3.20.20.450 13 236 1.2E-7 T 22-04-2016 IPR001633 EAL domain APECO1_RS20580 87749618596624f82aa805302bf38228 120 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.6E-40 T 22-04-2016 IPR011223 Uncharacterised conserved protein UCP028770 APECO1_RS20580 87749618596624f82aa805302bf38228 120 PIRSF PIRSF028770 1 120 1.6E-67 T 22-04-2016 IPR011223 Uncharacterised conserved protein UCP028770 APECO1_RS21455 e9f588040b00f0a765a09edb29d4dc3c 112 Pfam PF04219 Protein of unknown function, DUF 10 98 2.7E-39 T 22-04-2016 IPR007335 Protein of unknown function DUF413 APECO1_RS25245 77769da7265f23c83b4539d520393ae2 178 SUPERFAMILY SSF109604 1 173 4.47E-39 T 22-04-2016 APECO1_RS25245 77769da7265f23c83b4539d520393ae2 178 Gene3D G3DSA:1.10.3210.10 1 173 5.8E-51 T 22-04-2016 IPR006674 HD domain APECO1_RS09900 c1e3d41d2a392cbbdca3ca1af6cf7f7d 96 Gene3D G3DSA:1.10.10.710 20 86 8.7E-27 T 22-04-2016 IPR009813 Uncharacterised protein family YebG APECO1_RS09900 c1e3d41d2a392cbbdca3ca1af6cf7f7d 96 Pfam PF07130 YebG protein 1 74 6.0E-34 T 22-04-2016 IPR009813 Uncharacterised protein family YebG APECO1_RS21590 9f017bb65b68d9af47ad9f9868e7280e 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 9.8E-181 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 APECO1_RS21590 9f017bb65b68d9af47ad9f9868e7280e 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 359 64.165 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 APECO1_RS12890 8d347e02b763bd009a35cf91a2be5d60 331 PIRSF PIRSF020588 2 331 2.0E-153 T 22-04-2016 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 APECO1_RS22805 3219876b9475d275e167f644c2e6bcb3 196 Pfam PF04222 Protein of unknown function (DUF416) 5 192 3.0E-83 T 22-04-2016 IPR007338 Protein of unknown function DUF416 APECO1_RS22805 3219876b9475d275e167f644c2e6bcb3 196 Gene3D G3DSA:1.20.1590.10 1 192 8.8E-93 T 22-04-2016 IPR023381 YP001051499.1-like domain APECO1_RS14195 d42a3bafbcdaab11b8488ea9426deba3 82 SUPERFAMILY SSF46955 5 58 2.93E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain APECO1_RS14195 d42a3bafbcdaab11b8488ea9426deba3 82 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 52 9.0E-11 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) APECO1_RS13390 e1845433fdc0df39f77136809562c5e5 211 Pfam PF10938 YfdX protein 56 206 2.1E-46 T 22-04-2016 IPR021236 Uncharacterised protein family YfdX APECO1_RS13975 1930d5d084dc3dfb5e2e1e2b3c6d4df1 134 Pfam PF16931 Putative phage holin 1 125 8.8E-18 T 22-04-2016 IPR032637 Putative phage holin-like APECO1_RS03170 2b2f732cb9cfe974865afe61dbe647fc 155 PANTHER PTHR22881 1 154 4.3E-68 T 22-04-2016 APECO1_RS03170 2b2f732cb9cfe974865afe61dbe647fc 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 143 3.7E-37 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APECO1_RS03170 2b2f732cb9cfe974865afe61dbe647fc 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site APECO1_RS03170 2b2f732cb9cfe974865afe61dbe647fc 155 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 3.0E-39 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APECO1_RS03170 2b2f732cb9cfe974865afe61dbe647fc 155 SUPERFAMILY SSF55486 3 151 4.15E-50 T 22-04-2016 APECO1_RS03170 2b2f732cb9cfe974865afe61dbe647fc 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.263 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APECO1_RS03170 2b2f732cb9cfe974865afe61dbe647fc 155 Gene3D G3DSA:3.40.390.30 12 153 2.1E-51 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 APECO1_RS17125 3daedae6e9f42983884e96603f35d411 382 TIGRFAM TIGR01010 BexC_CtrB_KpsE: polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family 24 382 4.9E-149 T 22-04-2016 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD GO:0006859|GO:0009276|GO:0015542 APECO1_RS08670 61a2754e1f5536dcd70789dee0a964f7 421 Gene3D G3DSA:2.40.160.10 48 387 2.1E-16 T 22-04-2016 IPR023614 Porin domain APECO1_RS24430 2b5c40314035211389b6fa331e213929 163 SMART SM00530 22 77 1.1E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS24430 2b5c40314035211389b6fa331e213929 163 SUPERFAMILY SSF47413 10 75 9.01E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS24430 2b5c40314035211389b6fa331e213929 163 Gene3D G3DSA:1.10.260.40 16 75 9.7E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS24430 2b5c40314035211389b6fa331e213929 163 Pfam PF13560 Helix-turn-helix domain 18 75 3.3E-11 T 22-04-2016 APECO1_RS11775 90c527ba7eb23946cde580eb34cc772b 266 PANTHER PTHR20858:SF17 1 266 9.9E-119 T 22-04-2016 APECO1_RS11775 90c527ba7eb23946cde580eb34cc772b 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 3.7E-109 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APECO1_RS11775 90c527ba7eb23946cde580eb34cc772b 266 PANTHER PTHR20858 1 266 9.9E-119 T 22-04-2016 APECO1_RS11775 90c527ba7eb23946cde580eb34cc772b 266 Gene3D G3DSA:3.40.1190.20 6 263 9.4E-101 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS11775 90c527ba7eb23946cde580eb34cc772b 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 5.9E-95 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APECO1_RS11775 90c527ba7eb23946cde580eb34cc772b 266 SUPERFAMILY SSF53613 5 265 6.7E-81 T 22-04-2016 IPR029056 Ribokinase-like APECO1_RS08630 91c0d2f2a6340dad519695766995aded 111 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 23 111 3.0E-44 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC APECO1_RS08630 91c0d2f2a6340dad519695766995aded 111 Pfam PF06942 GlpM protein 5 111 2.9E-49 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC APECO1_RS19335 ba1410517813dfb9c8377686f892c4cc 361 Gene3D G3DSA:3.40.640.10 39 238 5.2E-21 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APECO1_RS19335 ba1410517813dfb9c8377686f892c4cc 361 Pfam PF00155 Aminotransferase class I and II 54 232 2.0E-8 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APECO1_RS19335 ba1410517813dfb9c8377686f892c4cc 361 SUPERFAMILY SSF53383 38 352 1.19E-29 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APECO1_RS20385 d7997edec107c0e6dafb6563581aac7f 236 Pfam PF11254 Protein of unknown function (DUF3053) 15 230 3.4E-89 T 22-04-2016 IPR021413 Protein of unknown function DUF3053 APECO1_RS20510 8c090d4c7b5f5e81047c02386f9c46d2 155 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 18 145 9.7E-30 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component APECO1_RS20510 8c090d4c7b5f5e81047c02386f9c46d2 155 PANTHER PTHR35011 1 153 2.1E-69 T 22-04-2016 APECO1_RS20510 8c090d4c7b5f5e81047c02386f9c46d2 155 PANTHER PTHR35011:SF3 1 153 2.1E-69 T 22-04-2016 APECO1_RS01330 072e8994e7dd69e64b0f2b4836d092f8 132 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 1 132 1.0E-66 T 22-04-2016 IPR020353 Toxin YafO APECO1_RS01330 072e8994e7dd69e64b0f2b4836d092f8 132 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 27 130 2.2E-35 T 22-04-2016 IPR020353 Toxin YafO APECO1_RS11150 31ac81db9a678dc150440ec5bf54fb38 87 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 74 1.4E-35 T 22-04-2016 IPR009610 CbtA toxin of type IV toxin-antitoxin system APECO1_RS01945 1ed5f291446673d46887c6beff93346e 86 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 85 7.4E-32 T 22-04-2016 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 APECO1_RS01945 1ed5f291446673d46887c6beff93346e 86 Hamap MF_01198 Anti-adapter protein IraP [iraP]. 1 86 26.833 T 22-04-2016 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 APECO1_RS01015 f8583bf1f52e72eafc017ec2d56af838 236 Pfam PF17185 NlpE C-terminal OB domain 144 232 1.1E-33 T 22-04-2016 IPR033450 NlpE, C-terminal OB domain APECO1_RS01015 f8583bf1f52e72eafc017ec2d56af838 236 Pfam PF04170 NlpE N-terminal domain 45 130 5.7E-27 T 22-04-2016 IPR007298 Copper resistance lipoprotein NlpE APECO1_RS20745 215e73e5a1b3e616b4b5b8ed8a444006 265 SUPERFAMILY SSF56112 58 201 1.04E-7 T 22-04-2016 IPR011009 Protein kinase-like domain APECO1_RS20745 215e73e5a1b3e616b4b5b8ed8a444006 265 PIRSF PIRSF037318 1 265 3.1E-159 T 22-04-2016 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.-|UniPathway: UPA00958 APECO1_RS20745 215e73e5a1b3e616b4b5b8ed8a444006 265 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 20 230 8.3E-71 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 APECO1_RS18005 70cee91284d72e257b05ba7d4d3d79ed 130 PANTHER PTHR33452 1 130 3.0E-95 T 22-04-2016 APECO1_RS18005 70cee91284d72e257b05ba7d4d3d79ed 130 Pfam PF07681 DoxX 9 87 7.2E-18 T 22-04-2016 IPR032808 DoxX family APECO1_RS18005 70cee91284d72e257b05ba7d4d3d79ed 130 PANTHER PTHR33452:SF8 1 130 3.0E-95 T 22-04-2016 APECO1_RS06755 75301c2594eed93f08bffe4c70021dc5 65 Gene3D G3DSA:1.10.10.10 2 52 1.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS06755 75301c2594eed93f08bffe4c70021dc5 65 SUPERFAMILY SSF46785 1 57 5.75E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS13085 64219e86f87abca7dbee1c348c4c0a94 230 ProDom PD104351 DNA TRANSFER GP7 INJECTION AAF75053 GENE DIRECT ACCESSION PRECURSOR GENBANK 44 167 2.0E-52 T 22-04-2016 APECO1_RS21715 a6995b91b92e7545b37bc7dda31f8e72 254 Pfam PF09992 Phosphodiester glycosidase 84 235 1.6E-17 T 22-04-2016 IPR018711 Phosphodiester glycosidase APECO1_RS11795 deff73d1b3ea7c1bcd54d5fb8897eba4 112 Pfam PF11776 Nickel/cobalt transporter regulator 52 101 2.8E-19 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB APECO1_RS11795 deff73d1b3ea7c1bcd54d5fb8897eba4 112 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 27 101 6.0E-40 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB APECO1_RS21735 5353c4d7ca6f949c5e86564da989d8ca 282 Pfam PF11692 Protein of unknown function (DUF3289) 10 278 5.7E-82 T 22-04-2016 IPR017483 Conserved hypothetical protein CHP03034 APECO1_RS21735 5353c4d7ca6f949c5e86564da989d8ca 282 TIGRFAM TIGR03034 TIGR03034: conserved hypothetical protein 8 280 7.6E-119 T 22-04-2016 IPR017483 Conserved hypothetical protein CHP03034 APECO1_RS05890 b1d160f863e9de4fe52c200d040355fd 58 Pfam PF05322 NINE Protein 1 58 1.3E-41 T 22-04-2016 IPR007986 NINE APECO1_RS04835 7ef192d18207f3ae3de951d95796233a 546 PANTHER PTHR30462:SF2 1 546 0.0 T 22-04-2016 APECO1_RS04835 7ef192d18207f3ae3de951d95796233a 546 PANTHER PTHR30462 1 546 0.0 T 22-04-2016 APECO1_RS04835 7ef192d18207f3ae3de951d95796233a 546 Pfam PF02470 MlaD protein 42 133 5.3E-9 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS04835 7ef192d18207f3ae3de951d95796233a 546 Pfam PF02470 MlaD protein 159 217 1.4E-7 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS04835 7ef192d18207f3ae3de951d95796233a 546 Pfam PF02470 MlaD protein 285 389 1.2E-14 T 22-04-2016 IPR003399 Mce/MlaD APECO1_RS14740 d30833677061d7e113829b51bee8f565 121 Pfam PF10973 Protein of unknown function (DUF2799) 32 111 4.8E-17 T 22-04-2016 IPR021242 Protein of unknown function DUF2799 APECO1_RS20480 ed581bbd83a92854b3590cbdf11d42a3 42 Pfam PF12035 Protein of unknown function (DUF3521) 1 35 2.7E-18 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS03540 1ed5362504934d484cbe923df0583e6c 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 97 2.0E-42 T 22-04-2016 IPR011846 Cyd operon protein YbgE APECO1_RS03540 1ed5362504934d484cbe923df0583e6c 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 94 6.8E-34 T 22-04-2016 IPR011846 Cyd operon protein YbgE APECO1_RS13200 f423260958df2745c49c517cece24f91 139 Pfam PF10765 Protein of unknown function (DUF2591) 2 134 5.8E-16 T 22-04-2016 IPR019701 Bacteriophage P22, NinX APECO1_RS21795 c02cdc2e91a70562adbd5dc0de8b1f9f 81 Gene3D G3DSA:1.10.10.10 36 79 8.3E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS07450 c74ef7009315a1d8e1f7a1bfe045d258 71 Pfam PF06806 Putative excisionase (DUF1233) 5 69 1.6E-19 T 22-04-2016 IPR009634 Bacteriophage 933W, Xis excisionase APECO1_RS24120 f18c9cdd00aae3353d26628422cc226a 289 Pfam PF15922 YjeJ-like 1 283 3.4E-154 T 22-04-2016 IPR031810 YjeJ-like APECO1_RS19760 b523769a7a1404cedc124896901bbdd6 42 Pfam PF12035 Protein of unknown function (DUF3521) 9 40 3.2E-7 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS01440 12c6d7d9c18272e6a9ea788ad3bd39a8 342 Pfam PF03864 Phage major capsid protein E 20 339 1.3E-13 T 22-04-2016 IPR005564 Major capsid protein GpE GO:0019028 APECO1_RS02640 533ee63df3c86d61c723d4ad385210bb 271 Pfam PF11392 Protein of unknown function (DUF2877) 159 263 1.7E-28 T 22-04-2016 IPR021530 Protein of unknown function DUF2877 APECO1_RS10615 8b3bf34914e10d5d86e153bde8a9d103 199 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 25 168 2.4E-28 T 22-04-2016 IPR006433 Prohead protease APECO1_RS10615 8b3bf34914e10d5d86e153bde8a9d103 199 Pfam PF04586 Caudovirus prohead serine protease 12 172 1.9E-44 T 22-04-2016 IPR006433 Prohead protease APECO1_RS22515 393981399990702463fdd9e9fedf0d42 39 Pfam PF12035 Protein of unknown function (DUF3521) 1 34 2.8E-17 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 SUPERFAMILY SSF50249 3 68 5.9E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.4E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 PIRSF PIRSF002599 1 69 2.5E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 PANTHER PTHR11544 1 69 2.9E-43 T 22-04-2016 APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 27 36 1.8E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 42 60 1.8E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 PRINTS PR00050 Cold shock protein signature 6 21 1.8E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 Gene3D G3DSA:2.40.50.140 4 67 1.6E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site APECO1_RS03030 a681313ba1313404e2556ff70a8ea5db 69 SMART SM00357 5 69 3.2E-33 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APECO1_RS04635 8267aeac98fba82dd5218542be140dbd 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 4.5E-171 T 22-04-2016 IPR003776 YcaO-like domain APECO1_RS04635 8267aeac98fba82dd5218542be140dbd 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 2.3E-80 T 22-04-2016 IPR003776 YcaO-like domain APECO1_RS06185 8b08c833e3518549015b4b6fa73d2b24 109 Pfam PF16456 YmgD protein 26 107 1.6E-48 T 22-04-2016 IPR032497 Uncharacterised protein YmgD APECO1_RS10005 6a420aafc765df31d2b13576981a0798 272 Gene3D G3DSA:3.20.20.410 1 261 3.2E-72 T 22-04-2016 IPR002763 Protein of unknown function DUF72 APECO1_RS10005 6a420aafc765df31d2b13576981a0798 272 PANTHER PTHR30348:SF3 1 271 7.3E-92 T 22-04-2016 APECO1_RS10005 6a420aafc765df31d2b13576981a0798 272 PANTHER PTHR30348 1 271 7.3E-92 T 22-04-2016 APECO1_RS10005 6a420aafc765df31d2b13576981a0798 272 SUPERFAMILY SSF117396 1 253 1.7E-64 T 22-04-2016 IPR002763 Protein of unknown function DUF72 APECO1_RS10005 6a420aafc765df31d2b13576981a0798 272 Pfam PF01904 Protein of unknown function DUF72 21 248 7.8E-51 T 22-04-2016 IPR002763 Protein of unknown function DUF72 APECO1_RS05660 3cf6c19e91b8ff56eb6fb88467b1424f 153 Pfam PF12158 Protein of unknown function (DUF3592) 7 138 2.9E-15 T 22-04-2016 IPR021994 Protein of unknown function DUF3592 APECO1_RS14985 48f30b3a03fa65bb6df9a5639d211014 577 Pfam PF03354 Phage Terminase 86 558 1.1E-67 T 22-04-2016 IPR005021 Phage terminase APECO1_RS14985 48f30b3a03fa65bb6df9a5639d211014 577 PANTHER PTHR41287 1 577 3.2E-206 T 22-04-2016 APECO1_RS20275 7433ae2ebb01292ebb800da2171a2fad 55 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 21 55 3.1E-26 T 22-04-2016 IPR025253 Type I toxin-antitoxin system, toxin Ldr APECO1_RS24550 12f52c1fdf366adbbb6f6ffe4aafac7d 1259 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 923 1259 9.4E-70 T 22-04-2016 IPR007452 Translocation and assembly module TamB APECO1_RS24550 12f52c1fdf366adbbb6f6ffe4aafac7d 1259 PANTHER PTHR36985 1 1259 0.0 T 22-04-2016 APECO1_RS09835 74fdeb5058e2b008d6d7f03a381ce213 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 1.2E-35 T 22-04-2016 IPR009954 Protein of unknown function DUF1482 APECO1_RS25145 599cb757aa62813f4f97443e9f06b1c4 179 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 179 44.014 T 22-04-2016 IPR020917 Primosomal protein 1 GO:0006260 APECO1_RS11155 09a0f6ded4e9199676621c48b1b3c0a7 64 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 1 64 6.0E-31 T 22-04-2016 APECO1_RS13315 fdc2a062cef7b8fc71cd6de55f442753 64 Pfam PF15944 Domain of unknown function (DUF4752) 8 54 1.8E-13 T 22-04-2016 IPR031858 Protein of unknown function DUF4752 APECO1_RS06860 a3d39fae149bf49ae22d6b968088fbeb 127 Pfam PF14000 DNA packaging protein FI 3 122 9.2E-14 T 22-04-2016 IPR025147 DNA packaging protein FI APECO1_RS05865 1d2469dff547c046cde571b90f96d32b 299 TIGRFAM TIGR01610 phage_O_Nterm: phage replication protein O, N-terminal domain 23 115 2.3E-39 T 22-04-2016 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 APECO1_RS05865 1d2469dff547c046cde571b90f96d32b 299 Pfam PF04492 Bacteriophage replication protein O 22 115 2.7E-33 T 22-04-2016 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 APECO1_RS13835 80a9dd33d587548bf4184d4111abf754 66 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 4.5E-34 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 APECO1_RS13835 80a9dd33d587548bf4184d4111abf754 66 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 63 27.722 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 APECO1_RS25155 974cd2eb74f9a1baba0931d9b9b0890d 256 PANTHER PTHR34390:SF2 1 256 1.5E-151 T 22-04-2016 APECO1_RS25155 974cd2eb74f9a1baba0931d9b9b0890d 256 Pfam PF06738 Putative threonine/serine exporter 11 250 1.6E-69 T 22-04-2016 IPR010619 Putative threonine/serine exporter APECO1_RS25155 974cd2eb74f9a1baba0931d9b9b0890d 256 PANTHER PTHR34390 1 256 1.5E-151 T 22-04-2016 APECO1_RS23440 5e3002b5cc03ee6209530987438bf6e9 252 PANTHER PTHR12553 5 251 3.4E-40 T 22-04-2016 APECO1_RS23440 5e3002b5cc03ee6209530987438bf6e9 252 SUPERFAMILY SSF56281 5 251 6.36E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS23440 5e3002b5cc03ee6209530987438bf6e9 252 Gene3D G3DSA:3.60.15.10 2 251 4.9E-62 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS23440 5e3002b5cc03ee6209530987438bf6e9 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 3 248 2.0E-129 T 22-04-2016 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 APECO1_RS23440 5e3002b5cc03ee6209530987438bf6e9 252 Pfam PF12706 Beta-lactamase superfamily domain 70 223 5.2E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase APECO1_RS07555 7de122ebfbca101772c54ce069d1bfd8 199 Pfam PF07105 Protein of unknown function (DUF1367) 1 198 2.0E-87 T 22-04-2016 IPR009797 Protein of unknown function DUF1367 APECO1_RS21105 7d73077f39c2f8575b69684b45133036 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 286 4.8E-96 T 22-04-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 APECO1_RS16075 b72efb7b90dfc9a010a7500a7d48e1f4 359 PANTHER PTHR35564:SF3 2 348 4.4E-100 T 22-04-2016 APECO1_RS16075 b72efb7b90dfc9a010a7500a7d48e1f4 359 PANTHER PTHR35564 2 348 4.4E-100 T 22-04-2016 APECO1_RS16075 b72efb7b90dfc9a010a7500a7d48e1f4 359 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 21 318 1.6E-75 T 22-04-2016 IPR010732 Type VI secretion, TssG-like APECO1_RS16075 b72efb7b90dfc9a010a7500a7d48e1f4 359 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 318 2.4E-78 T 22-04-2016 IPR010732 Type VI secretion, TssG-like APECO1_RS22630 2f6db36b7105d20f193c42038f4a3b07 119 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 119 2.0E-64 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 APECO1_RS22630 2f6db36b7105d20f193c42038f4a3b07 119 Pfam PF07226 Protein of unknown function (DUF1422) 3 115 2.2E-54 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 APECO1_RS04555 be12fb1beafbe71451e429f7f83e00e8 669 Pfam PF03406 Phage tail fibre repeat 214 253 2.6E-18 T 22-04-2016 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 APECO1_RS04555 be12fb1beafbe71451e429f7f83e00e8 669 Pfam PF03406 Phage tail fibre repeat 170 210 2.2E-20 T 22-04-2016 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 APECO1_RS04555 be12fb1beafbe71451e429f7f83e00e8 669 PANTHER PTHR35191 1 337 2.1E-90 T 22-04-2016 APECO1_RS04555 be12fb1beafbe71451e429f7f83e00e8 669 PANTHER PTHR35191 370 418 2.1E-90 T 22-04-2016 APECO1_RS04555 be12fb1beafbe71451e429f7f83e00e8 669 Pfam PF12571 Phage tail-collar fibre protein 1 151 7.4E-57 T 22-04-2016 IPR022225 Phage tail fibre protein APECO1_RS23890 2f33ad5088d28f0ff9cf02b67e493d64 228 PANTHER PTHR39453 8 227 4.5E-75 T 22-04-2016 APECO1_RS23890 2f33ad5088d28f0ff9cf02b67e493d64 228 Pfam PF06130 Phosphate propanoyltransferase 147 211 4.4E-12 T 22-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 APECO1_RS23890 2f33ad5088d28f0ff9cf02b67e493d64 228 Pfam PF06130 Phosphate propanoyltransferase 38 116 4.8E-28 T 22-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 APECO1_RS23890 2f33ad5088d28f0ff9cf02b67e493d64 228 PIRSF PIRSF010130 1 224 2.6E-91 T 22-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 APECO1_RS23890 2f33ad5088d28f0ff9cf02b67e493d64 228 PANTHER PTHR39453:SF1 8 227 4.5E-75 T 22-04-2016 APECO1_RS05165 f921150b96a2150a8149362fc6866cce 137 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 3 126 1.9E-15 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 APECO1_RS05165 f921150b96a2150a8149362fc6866cce 137 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 137 4.0E-66 T 22-04-2016 APECO1_RS05165 f921150b96a2150a8149362fc6866cce 137 Pfam PF13994 PgaD-like protein 4 125 2.2E-16 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 APECO1_RS00390 7984ce2d5a17419bf134e2c8ab79d8e5 43 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 3 37 3.0E-11 T 22-04-2016 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 APECO1_RS08510 715552cc00b8648057e149949e26d2ab 186 Pfam PF13302 Acetyltransferase (GNAT) domain 8 141 4.8E-21 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APECO1_RS08510 715552cc00b8648057e149949e26d2ab 186 SUPERFAMILY SSF55729 6 164 3.04E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS08510 715552cc00b8648057e149949e26d2ab 186 PANTHER PTHR13256 1 174 5.9E-79 T 22-04-2016 APECO1_RS08510 715552cc00b8648057e149949e26d2ab 186 PANTHER PTHR13256:SF21 1 174 5.9E-79 T 22-04-2016 APECO1_RS08510 715552cc00b8648057e149949e26d2ab 186 Gene3D G3DSA:3.40.630.30 6 166 6.9E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APECO1_RS05915 f6ad4884d397b9dd5e306fd970d41f17 127 Pfam PF06530 Phage antitermination protein Q 2 120 1.4E-31 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 APECO1_RS21930 574581c254ac02fc70ad5d5ca948d3af 201 SUPERFAMILY SSF55718 12 111 4.41E-7 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APECO1_RS21930 574581c254ac02fc70ad5d5ca948d3af 201 PANTHER PTHR38693:SF1 1 201 4.0E-73 T 22-04-2016 APECO1_RS21930 574581c254ac02fc70ad5d5ca948d3af 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 2.1E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APECO1_RS21930 574581c254ac02fc70ad5d5ca948d3af 201 PANTHER PTHR38693 1 201 4.0E-73 T 22-04-2016 APECO1_RS04890 1d27f14c24a3a1404eebff2122cd79d1 148 Pfam PF03733 Inner membrane component domain 77 127 6.2E-17 T 22-04-2016 IPR005185 Inner membrane component domain APECO1_RS04890 1d27f14c24a3a1404eebff2122cd79d1 148 Pfam PF03733 Inner membrane component domain 4 53 3.2E-9 T 22-04-2016 IPR005185 Inner membrane component domain APECO1_RS04890 1d27f14c24a3a1404eebff2122cd79d1 148 PANTHER PTHR31503 1 147 5.5E-64 T 22-04-2016 APECO1_RS04890 1d27f14c24a3a1404eebff2122cd79d1 148 PIRSF PIRSF028777 1 139 2.8E-54 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 APECO1_RS06135 48ab9db8b5960d4236b69b65cd655cde 78 Pfam PF10798 Biofilm development protein YmgB/AriR 27 63 2.6E-5 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APECO1_RS06135 48ab9db8b5960d4236b69b65cd655cde 78 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 25 76 0.006 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APECO1_RS19250 d22e0347321b013ad9158b232d79e2b3 72 PIRSF PIRSF006169 1 72 9.5E-38 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APECO1_RS19250 d22e0347321b013ad9158b232d79e2b3 72 Gene3D G3DSA:1.10.10.610 1 72 1.2E-38 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APECO1_RS19250 d22e0347321b013ad9158b232d79e2b3 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 1.0E-29 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APECO1_RS19250 d22e0347321b013ad9158b232d79e2b3 72 SUPERFAMILY SSF118001 1 71 1.57E-29 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APECO1_RS19250 d22e0347321b013ad9158b232d79e2b3 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 7.3E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APECO1_RS19250 d22e0347321b013ad9158b232d79e2b3 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 26.491 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APECO1_RS06385 6a0f28f7a21cfc27f20df0b8b89ec6ec 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 6.1E-47 T 22-04-2016 IPR019698 Protein of unknown function DUF2583 APECO1_RS05220 43f80aa9c42c08085b9e300c22e49970 277 Pfam PF03783 Curli production assembly/transport component CsgG 41 255 1.3E-80 T 22-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 APECO1_RS14055 f58cee3a052de17f63c68c29b4c0a1ee 145 Gene3D G3DSA:2.60.120.260 56 116 3.5E-4 T 22-04-2016 IPR008979 Galactose-binding domain-like APECO1_RS07125 2f7611af1672614622d32d671b386112 57 Hamap MF_01641 UPF0509 protein YciZ [yciZ]. 1 57 25.98 T 22-04-2016 IPR020887 Uncharacterised protein family UPF0509 APECO1_RS22985 ea8c0d748b8851e307dded14ffe3c860 80 Pfam PF11106 Exopolysaccharide production protein YjbE 1 79 2.0E-28 T 22-04-2016 IPR025858 Exopolysaccharide production protein YjbE APECO1_RS00155 e03b0f5bc78ba516728df8316bfb0db3 121 Pfam PF05656 Protein of unknown function (DUF805) 14 119 5.3E-18 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APECO1_RS05815 8bd2bbe3e97a8aef306b9cb445d81357 66 Pfam PF11058 Antirestriction protein Ral 1 66 1.0E-48 T 22-04-2016 IPR022759 Antirestriction protein Ral APECO1_RS05815 8bd2bbe3e97a8aef306b9cb445d81357 66 ProDom PD019289 RAL RESTRICTION ANTIRESTRICTION INHIBITOR SYSTEM LAMBDA ANT-RESTRICTION GENE 1 60 3.0E-30 T 22-04-2016 IPR022759 Antirestriction protein Ral APECO1_RS05800 9e9ef5da951c3d27de9718356fd0657f 47 Pfam PF06301 Bacteriophage lambda Kil protein 1 42 8.2E-29 T 22-04-2016 IPR010444 Bacteriophage lambda Kil APECO1_RS23985 5c4296a9f35a688c38fa7a94ecc2f183 54 Pfam PF12759 InsA C-terminal domain 6 50 6.1E-30 T 22-04-2016 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain APECO1_RS04490 3aca2d8fc7a55380eea6260a09d186a4 247 Pfam PF05944 Phage small terminase subunit 35 164 5.8E-45 T 22-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 APECO1_RS00590 321026b75d28233751983fbb6d3e530c 284 PANTHER PTHR38684 2 284 3.5E-109 T 22-04-2016 APECO1_RS00590 321026b75d28233751983fbb6d3e530c 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 7.6E-159 T 22-04-2016 IPR031347 Protein AmpE APECO1_RS02825 ca40fccbc265ae73ebcb99f11d51f2b4 45 Pfam PF15954 Domain of unknown function (DUF4759) 10 43 5.1E-20 T 22-04-2016 IPR031873 Domain of unknown function DUF4759 APECO1_RS09250 4b7f1849fc7a4259b25ba3c9082a1d04 96 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 1 96 3.0E-49 T 22-04-2016 IPR020499 Uncharacterised protein family YdiZ APECO1_RS09250 4b7f1849fc7a4259b25ba3c9082a1d04 96 Pfam PF11080 Protein of unknown function (DUF2622) 1 93 1.7E-40 T 22-04-2016 IPR022597 Endoribonuclease GhoS GO:0004521 APECO1_RS19340 606f1b4513e326c576bb5d59539e0c1e 434 Pfam PF10797 Protein of unknown function 6 431 7.2E-171 T 22-04-2016 IPR019733 Uncharacterised protein family YhfT APECO1_RS17495 27e1e3e5ce74959646cb815a222de365 308 Pfam PF12883 Protein of unknown function (DUF3828) 241 286 0.003 T 22-04-2016 IPR024289 Domain of unknown function DUF3828 APECO1_RS17495 27e1e3e5ce74959646cb815a222de365 308 Pfam PF12883 Protein of unknown function (DUF3828) 25 143 2.5E-31 T 22-04-2016 IPR024289 Domain of unknown function DUF3828 APECO1_RS23680 3914da86f51524ffa6a64ccf2362e96b 125 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 4.9E-58 T 22-04-2016 IPR009610 CbtA toxin of type IV toxin-antitoxin system APECO1_RS11575 6110f42cdf3f3131f6d09523fd505b4a 815 Pfam PF10145 Phage-related minor tail protein 239 440 8.1E-39 T 22-04-2016 IPR010090 Phage tail tape measure protein APECO1_RS11575 6110f42cdf3f3131f6d09523fd505b4a 815 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 199 549 1.5E-105 T 22-04-2016 IPR010090 Phage tail tape measure protein APECO1_RS06670 131419c522610ef6c33d0f33c5a947a8 63 Pfam PF07358 Protein of unknown function (DUF1482) 4 61 1.8E-23 T 22-04-2016 IPR009954 Protein of unknown function DUF1482 APECO1_RS07315 48db9e65d08ec3300ab00844891161d9 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 54 341 1.6E-150 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 APECO1_RS07315 48db9e65d08ec3300ab00844891161d9 353 PANTHER PTHR39342:SF1 1 353 3.6E-150 T 22-04-2016 APECO1_RS07315 48db9e65d08ec3300ab00844891161d9 353 PANTHER PTHR39342 1 353 3.6E-150 T 22-04-2016 APECO1_RS07315 48db9e65d08ec3300ab00844891161d9 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 39.242 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 APECO1_RS07315 48db9e65d08ec3300ab00844891161d9 353 Pfam PF05128 Domain of unknown function (DUF697) 183 341 1.0E-53 T 22-04-2016 IPR021147 Protein of unknown function DUF697 APECO1_RS07805 70ae7df1b964c15eb97ff2db11c457d1 88 PANTHER PTHR38008:SF1 1 88 4.4E-40 T 22-04-2016 APECO1_RS07805 70ae7df1b964c15eb97ff2db11c457d1 88 Pfam PF03891 Domain of unknown function (DUF333) 38 83 2.5E-15 T 22-04-2016 IPR005590 Protein of unknown function DUF333 APECO1_RS07805 70ae7df1b964c15eb97ff2db11c457d1 88 PANTHER PTHR38008 1 88 4.4E-40 T 22-04-2016 APECO1_RS19345 1e11ef72011f96bc70cbc16ae9f712a8 117 Pfam PF10941 Protein of unknown function DUF2620 2 116 6.8E-49 T 22-04-2016 IPR021238 Protein of unknown function DUF2620 APECO1_RS01240 33d03514da3c1c66d2f0b3480c6af0f9 479 Pfam PF03412 Peptidase C39 family 352 474 6.9E-6 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APECO1_RS01240 33d03514da3c1c66d2f0b3480c6af0f9 479 Pfam PF13665 Domain of unknown function (DUF4150) 15 116 1.1E-14 T 22-04-2016 IPR025425 Domain of unknown function DUF4150 APECO1_RS08330 889c814437eca47d9e3c1da7db6d3431 88 SMART SM00530 16 71 8.2E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS08330 889c814437eca47d9e3c1da7db6d3431 88 Pfam PF01381 Helix-turn-helix 18 69 6.6E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APECO1_RS08330 889c814437eca47d9e3c1da7db6d3431 88 Gene3D G3DSA:1.10.260.40 6 69 3.4E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS08330 889c814437eca47d9e3c1da7db6d3431 88 SUPERFAMILY SSF47413 5 70 4.83E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APECO1_RS08730 f1079bd913a36096dbb5a8246f6118d8 146 Pfam PF10754 Protein of unknown function (DUF2569) 6 144 4.7E-40 T 22-04-2016 IPR019690 Protein of unknown function DUF2569 APECO1_RS25335 5d434060f3de2caedb0761b0d7ff6423 111 Pfam PF07041 Protein of unknown function (DUF1327) 1 111 2.3E-56 T 22-04-2016 IPR009759 Bacteriophage ES18, Gp24 APECO1_RS12950 5847f6451a900b00c079f560676342c9 280 Pfam PF11245 Protein of unknown function (DUF2544) 46 280 2.6E-71 T 22-04-2016 IPR021407 Protein of unknown function DUF2544 APECO1_RS04690 2627f830251133cdb85d9099da893814 410 PANTHER PTHR30528 3 410 1.4E-141 T 22-04-2016 APECO1_RS04690 2627f830251133cdb85d9099da893814 410 Pfam PF06224 Winged helix DNA-binding domain 38 381 1.4E-83 T 22-04-2016 IPR009351 Protein of unknown function DUF1006 APECO1_RS11565 a85f188a55f1fb4f2d49d685a45ee7f6 387 Pfam PF05954 Phage late control gene D protein (GPD) 44 364 1.3E-47 T 22-04-2016 APECO1_RS11565 a85f188a55f1fb4f2d49d685a45ee7f6 387 SUPERFAMILY SSF69279 15 186 2.49E-27 T 22-04-2016 APECO1_RS07620 af0e296c1cedb69c26a65c64d4c9b4bf 433 Pfam PF03237 Terminase-like family 23 416 2.1E-44 T 22-04-2016 IPR004921 Terminase, large subunit APECO1_RS08025 9e97615d3b36973dd8d1c14cc4ebc102 57 Pfam PF10753 Protein of unknown function (DUF2566) 4 57 9.5E-28 T 22-04-2016 IPR019689 Toxin GhoT/OrtT APECO1_RS21690 0821da3b1e15e57c130fe7e2bf1d8d30 235 PANTHER PTHR38765 3 235 6.6E-92 T 22-04-2016 APECO1_RS21690 0821da3b1e15e57c130fe7e2bf1d8d30 235 Pfam PF04340 Protein of unknown function, DUF484 11 232 9.0E-89 T 22-04-2016 IPR007435 Protein of unknown function DUF484 APECO1_RS02000 b170fdf1dd120ef8bee722370fa5a35c 93 ProDom PD029376 YDBD YKIA ECS0442 ECS2009 1 93 3.0E-42 T 22-04-2016 IPR024497 Protein of unknown function DUF2773 APECO1_RS02000 b170fdf1dd120ef8bee722370fa5a35c 93 Pfam PF10971 Protein of unknown function (DUF2773) 13 93 6.5E-43 T 22-04-2016 IPR024497 Protein of unknown function DUF2773 APECO1_RS00275 d00d546f64ec8ac7fb3d46e5e822b3ec 77 Pfam PF07362 Post-segregation antitoxin CcdA 8 77 5.5E-26 T 22-04-2016 IPR009956 Post-segregation antitoxin CcdA APECO1_RS00275 d00d546f64ec8ac7fb3d46e5e822b3ec 77 Gene3D G3DSA:1.10.1220.10 4 44 2.8E-5 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APECO1_RS15035 e6e74a5e88f282d4aae1efe0c09e2682 329 SMART SM00507 246 295 5.7E-5 T 22-04-2016 IPR003615 HNH nuclease APECO1_RS15035 e6e74a5e88f282d4aae1efe0c09e2682 329 Pfam PF06147 Protein of unknown function (DUF968) 129 326 1.6E-86 T 22-04-2016 IPR010373 Protein of unknown function DUF968 APECO1_RS20875 c922691bd5baa00a90135cd8355f991e 226 Pfam PF07385 Protein of unknown function (DUF1498) 1 222 3.5E-88 T 22-04-2016 IPR010864 Protein of unknown function DUF1498 KEGG: 00040+5.3.1.15 APECO1_RS20860 67a34ce03b265acf8842a8c3cbc410ae 401 PANTHER PTHR36178:SF1 1 401 4.2E-206 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APECO1_RS20860 67a34ce03b265acf8842a8c3cbc410ae 401 Pfam PF03616 Sodium/glutamate symporter 2 366 9.9E-165 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APECO1_RS20860 67a34ce03b265acf8842a8c3cbc410ae 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 2.2E-205 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APECO1_RS20860 67a34ce03b265acf8842a8c3cbc410ae 401 PANTHER PTHR36178 1 401 4.2E-206 T 22-04-2016 APECO1_RS12410 207f78a0af895c888342a8ec372d0e24 440 PANTHER PTHR41983:SF2 1 440 0.0 T 22-04-2016 APECO1_RS12410 207f78a0af895c888342a8ec372d0e24 440 PANTHER PTHR41983 1 440 0.0 T 22-04-2016 APECO1_RS12410 207f78a0af895c888342a8ec372d0e24 440 TIGRFAM TIGR00366 TIGR00366: TIGR00366 family protein 4 428 1.0E-225 T 22-04-2016 IPR006161 Conserved hypothetical protein CHP00336 APECO1_RS12410 207f78a0af895c888342a8ec372d0e24 440 Pfam PF02667 Short chain fatty acid transporter 1 440 7.6E-231 T 22-04-2016 IPR006160 Short chain fatty acid transporter AtoE APECO1_RS07370 d0872fdca7764c1ba04cb966bae40205 85 Pfam PF10749 Protein of unknown function (DUF2534) 5 82 7.5E-40 T 22-04-2016 IPR019685 Protein of unknown function DUF2534 APECO1_RS06780 2279a93c15d55b129803270fed91cdea 75 Pfam PF08410 Domain of unknown function (DUF1737) 3 49 6.2E-15 T 22-04-2016 IPR013619 Domain of unknown function DUF1737 APECO1_RS16580 9298e53427414aec405e9f5a472e65f9 192 Pfam PF12822 Protein of unknown function (DUF3816) 10 173 3.6E-11 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 APECO1_RS20130 df9b74708cc1a3803391984b0597a232 175 Gene3D G3DSA:1.10.10.10 108 169 2.0E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APECO1_RS20130 df9b74708cc1a3803391984b0597a232 175 Pfam PF00196 Bacterial regulatory proteins, luxR family 117 167 1.3E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APECO1_RS20130 df9b74708cc1a3803391984b0597a232 175 SUPERFAMILY SSF46894 111 169 1.33E-7 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APECO1_RS20130 df9b74708cc1a3803391984b0597a232 175 Gene3D G3DSA:3.20.20.150 21 71 1.5E-10 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APECO1_RS22060 770452224230f7423b54d8187e8fd057 476 Pfam PF06097 Bacterial protein of unknown function (DUF945) 4 464 4.8E-91 T 22-04-2016 IPR010352 Protein of unknown function DUF945 APECO1_RS11610 c4f29c21b8506c2f61abf3fc9c3288e3 298 PANTHER PTHR35191 1 280 1.8E-75 T 22-04-2016 APECO1_RS11610 c4f29c21b8506c2f61abf3fc9c3288e3 298 Pfam PF12571 Phage tail-collar fibre protein 1 150 3.6E-62 T 22-04-2016 IPR022225 Phage tail fibre protein APECO1_RS10750 5ceebed1b3b04213806ac66b02dbc10b 141 Gene3D G3DSA:1.10.3600.10 1 122 2.1E-49 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APECO1_RS10750 5ceebed1b3b04213806ac66b02dbc10b 141 Pfam PF06254 Putative bacterial toxin ydaT 48 101 1.1E-9 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APECO1_RS01600 c98341a196236c46f9bdee8967006508 78 Gene3D G3DSA:3.30.1660.10 30 78 1.2E-9 T 22-04-2016 IPR025543 Dodecin-like APECO1_RS01600 c98341a196236c46f9bdee8967006508 78 Pfam PF07338 Protein of unknown function (DUF1471) 30 78 2.4E-11 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS01600 c98341a196236c46f9bdee8967006508 78 PANTHER PTHR34156:SF3 2 78 2.6E-45 T 22-04-2016 APECO1_RS01600 c98341a196236c46f9bdee8967006508 78 SUPERFAMILY SSF159871 4 78 3.66E-12 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APECO1_RS01600 c98341a196236c46f9bdee8967006508 78 PANTHER PTHR34156 2 78 2.6E-45 T 22-04-2016 APECO1_RS03405 90cf55ba974ffb05900546f5517665f9 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 1.8E-34 T 22-04-2016 IPR019663 Uncharacterised protein YbfA APECO1_RS16690 787bd82edfddb06fbb465de16234d839 235 SUPERFAMILY SSF54060 26 230 1.65E-89 T 22-04-2016 APECO1_RS16690 787bd82edfddb06fbb465de16234d839 235 PANTHER PTHR33607 1 232 3.0E-71 T 22-04-2016 APECO1_RS16690 787bd82edfddb06fbb465de16234d839 235 Pfam PF04231 Endonuclease I 45 229 1.4E-46 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 APECO1_RS04605 d1f8e7ac7d7ae0e0bda488418a15c957 815 Pfam PF10145 Phage-related minor tail protein 239 440 9.1E-39 T 22-04-2016 IPR010090 Phage tail tape measure protein APECO1_RS04605 d1f8e7ac7d7ae0e0bda488418a15c957 815 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 199 548 5.8E-106 T 22-04-2016 IPR010090 Phage tail tape measure protein APECO1_RS12135 dba544ddbc138316162a3bb53f91d15e 84 PANTHER PTHR36931 1 84 1.1E-38 T 22-04-2016 APECO1_RS12135 dba544ddbc138316162a3bb53f91d15e 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 60 2.6E-6 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein APECO1_RS23845 a3a44cf54e299d70a11131defe761e45 99 SMART SM00877 35 99 0.0011 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS23845 a3a44cf54e299d70a11131defe761e45 99 SUPERFAMILY SSF143414 35 94 1.7E-7 T 22-04-2016 APECO1_RS23845 a3a44cf54e299d70a11131defe761e45 99 Pfam PF00936 BMC domain 41 94 2.6E-6 T 22-04-2016 IPR000249 Microcompartment protein, bacteria APECO1_RS10595 e8093b84683f7655026503d3bf36c38b 149 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 13 110 3.3E-11 T 22-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component APECO1_RS10595 e8093b84683f7655026503d3bf36c38b 149 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 144 1.5E-24 T 22-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component APECO1_RS16035 650fc174a4028102fddc49fcd8daeb17 1112 Pfam PF06744 Type VI secretion protein IcmF C-terminal 850 1046 4.5E-53 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal APECO1_RS16035 650fc174a4028102fddc49fcd8daeb17 1112 Pfam PF06761 Intracellular multiplication and human macrophage-killing 401 717 3.5E-61 T 22-04-2016 IPR009612 ImcF-related APECO1_RS16035 650fc174a4028102fddc49fcd8daeb17 1112 PANTHER PTHR36153 104 1102 3.9E-131 T 22-04-2016 APECO1_RS16035 650fc174a4028102fddc49fcd8daeb17 1112 PANTHER PTHR36153:SF1 104 1102 3.9E-131 T 22-04-2016 APECO1_RS15845 d402373386ab2ea6d2299546ab240c2f 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 1.7E-72 T 22-04-2016 IPR009948 Syd GO:0009898 APECO1_RS15845 d402373386ab2ea6d2299546ab240c2f 181 Hamap MF_01104 Protein Syd [syd]. 3 181 35.928 T 22-04-2016 IPR009948 Syd GO:0009898 APECO1_RS11040 a0464c2b27a5ad5457efc98d80e535e1 133 Pfam PF11682 Probable zinc-ribbon 4 122 5.0E-19 T 22-04-2016 IPR021696 Protein of unknown function DUF3279 APECO1_RS13100 379eb8839ed9bef136d688025cc22409 472 Pfam PF11134 Phage stabilisation protein 4 472 3.9E-288 T 22-04-2016 IPR021098 Bacteriophage P22, Gp10, DNA-stabilising APECO1_RS00745 51e6ba0956dd5cf7adf8cb936b316e8c 201 SUPERFAMILY SSF49401 43 201 3.43E-14 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS00745 51e6ba0956dd5cf7adf8cb936b316e8c 201 Gene3D G3DSA:2.60.40.1090 37 201 5.3E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS00745 51e6ba0956dd5cf7adf8cb936b316e8c 201 Pfam PF00419 Fimbrial protein 41 200 2.0E-10 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS09680 58b06c25e617a14f7afe93098be37699 99 SUPERFAMILY SSF140670 3 99 5.23E-53 T 22-04-2016 APECO1_RS09680 58b06c25e617a14f7afe93098be37699 99 Pfam PF08986 Domain of unknown function (DUF1889) 1 99 1.5E-67 T 22-04-2016 IPR015079 Protein of unknown function DUF1889 APECO1_RS03310 afc55ff733d2ef2d8058add6ca3486eb 468 Pfam PF03573 outer membrane porin, OprD family 33 430 2.1E-25 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 APECO1_RS03310 afc55ff733d2ef2d8058add6ca3486eb 468 Gene3D G3DSA:2.40.160.10 38 468 2.2E-50 T 22-04-2016 IPR023614 Porin domain APECO1_RS23000 4b857aa0cae5a760d4ff08edc903a528 698 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 30 691 1.4E-270 T 22-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH APECO1_RS09045 37bdf2d308438ce9698e92c189bf8cb3 62 Pfam PF15930 Domain of unknown function 1 62 2.7E-42 T 22-04-2016 IPR031830 Uncharacterised protein YdiH APECO1_RS13545 b8bdea31c2cf66019b18d6f8739081a3 52 TIGRFAM TIGR03510 XapX: XapX domain 4 50 1.5E-18 T 22-04-2016 IPR020017 XapX domain APECO1_RS13310 8e0c349f8adc43175eff53583a9eb2cc 190 Pfam PF13935 Ead/Ea22-like protein 3 104 9.5E-31 T 22-04-2016 IPR025153 Ead/Ea22-like protein APECO1_RS13310 8e0c349f8adc43175eff53583a9eb2cc 190 Pfam PF04448 Protein of unknown function (DUF551) 129 187 2.0E-9 T 22-04-2016 IPR007539 Domain of unknown function DUF551 APECO1_RS15270 28db03803a6581da91e86a422b1be031 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 104 1.3E-13 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD APECO1_RS13090 55e37ba6e0ebad0ae0cf38e49a56d76d 151 ProDom PD302408 P31 ECS3234 GENOME 27 148 0.003 T 22-04-2016 IPR022568 Protein of unknown function DUF2824 APECO1_RS13090 55e37ba6e0ebad0ae0cf38e49a56d76d 151 Pfam PF11039 Protein of unknown function (DUF2824) 4 148 6.1E-64 T 22-04-2016 IPR022568 Protein of unknown function DUF2824 APECO1_RS20870 7860a5431d581452f2b9943ffd2d7039 569 Pfam PF05170 AsmA family 1 522 3.8E-25 T 22-04-2016 IPR007844 AsmA APECO1_RS11585 054f6681df04e635c2c25fc4f122b925 91 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 7 85 5.3E-11 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative APECO1_RS23960 5a46f215ab12e0015039a595942e4ac4 61 Pfam PF13817 IS66 C-terminal element 18 54 3.1E-16 T 22-04-2016 APECO1_RS12960 83b80310e63794b5f7443f369b6a7b8a 159 Pfam PF00419 Fimbrial protein 24 159 1.2E-17 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS12960 83b80310e63794b5f7443f369b6a7b8a 159 SUPERFAMILY SSF49401 32 159 1.64E-24 T 22-04-2016 IPR008966 Adhesion domain APECO1_RS12960 83b80310e63794b5f7443f369b6a7b8a 159 Gene3D G3DSA:2.60.40.1090 22 159 1.1E-13 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APECO1_RS06950 6f5069a240f1425b067db276b36cc720 89 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 31 86 4.8E-25 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly APECO1_RS06950 6f5069a240f1425b067db276b36cc720 89 PANTHER PTHR34413 1 89 4.8E-29 T 22-04-2016 APECO1_RS05225 3cbfc0c9fbef801dfbd868b7db9901fa 138 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 6 129 2.6E-35 T 22-04-2016 IPR018893 Type VIII secretion system, CsgF APECO1_RS25360 f104b1a8704198942ae5c8a4421817c5 57 Pfam PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system 1 54 1.5E-33 T 22-04-2016 IPR012563 Gns APECO1_RS05820 87d78df1221e73dbb91fffafdf5d5c6a 193 Pfam PF14163 Super-infection exclusion protein B 24 147 1.8E-22 T 22-04-2016 IPR025982 Superinfection exclusion protein B APECO1_RS15470 49f02930ef1ffc948cd4fdaa55920f18 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 133 1.8E-55 T 22-04-2016 IPR010005 Formate hydrogenlyase maturation HycH APECO1_RS15470 49f02930ef1ffc948cd4fdaa55920f18 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 134 1.0E-75 T 22-04-2016 IPR010005 Formate hydrogenlyase maturation HycH APECO1_RS06885 a39aca8c25bb12446a5d3924a6624ce9 143 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 1 119 3.9E-51 T 22-04-2016 IPR010027 Bacteriophage lambda, GpG, minor tail APECO1_RS06885 a39aca8c25bb12446a5d3924a6624ce9 143 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 1 139 1.0E-49 T 22-04-2016 IPR010027 Bacteriophage lambda, GpG, minor tail APECO1_RS16760 07aca48544f0a839f6c527b63dfd46dd 46 Pfam PF12035 Protein of unknown function (DUF3521) 1 28 1.6E-10 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS02375 1022e43d8adfefd67ae387ec3c0aa91d 175 Pfam PF07445 Primosomal replication protein priC 9 173 1.7E-45 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC APECO1_RS15010 1ebddf28eef41278528b0e19c7a92efe 145 Pfam PF03245 Bacteriophage Rz lysis protein 39 143 1.5E-38 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 APECO1_RS06030 94541e275048653cf7689fd67856ca07 144 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 5 110 1.3E-49 T 22-04-2016 IPR009350 Minor tail T APECO1_RS06030 94541e275048653cf7689fd67856ca07 144 Pfam PF06223 Minor tail protein T 11 111 4.9E-48 T 22-04-2016 IPR009350 Minor tail T APECO1_RS20280 6f41d29f9f7de3b1f711bd5dd4dd7b34 55 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 21 55 3.1E-26 T 22-04-2016 IPR025253 Type I toxin-antitoxin system, toxin Ldr APECO1_RS21225 2d0dd3c098c4925b54388511c8e7e200 157 ProDom PD092472 YIEI MEMBRANE INNER TRANSMEMBRANE 1 146 2.0E-60 T 22-04-2016 IPR020222 Inner membrane CbrB GO:0016021 APECO1_RS08665 516ad670fbfa372943956b6f114ccb1f 502 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 480 2.3E-139 T 22-04-2016 IPR010352 Protein of unknown function DUF945 APECO1_RS10990 c7a1b270eeab2ce1accd8355da4c1488 38 Pfam PF13817 IS66 C-terminal element 14 37 2.2E-8 T 22-04-2016 APECO1_RS10580 410ba409f16cce79c14dc5fe34346abe 123 Pfam PF06222 Phage tail assembly chaperone 1 123 6.8E-57 T 22-04-2016 IPR010411 Bacteriophage tail assembly protein, Gp13/14 APECO1_RS01500 8f2617947e8eb0f318b70d59abc83627 109 Pfam PF03692 Putative zinc- or iron-chelating domain 6 98 1.6E-12 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein APECO1_RS04990 ba88ee2c8ffa535d78ee61ad5a098427 30 Pfam PF08173 Membrane bound YbgT-like protein 1 25 2.7E-11 T 22-04-2016 IPR012994 Membrane bound YbgT-like APECO1_RS23910 256b2d908e222e37427b1b37c30f1768 63 Pfam PF13973 Domain of unknown function (DUF4222) 6 56 4.0E-21 T 22-04-2016 IPR025317 Protein of unknown function DUF4222 APECO1_RS03845 14a6b21833c834864166cdbce95c5431 377 Pfam PF12698 ABC-2 family transporter protein 29 370 2.4E-38 T 22-04-2016 APECO1_RS03845 14a6b21833c834864166cdbce95c5431 377 PANTHER PTHR30294:SF17 5 377 4.8E-303 T 22-04-2016 APECO1_RS03845 14a6b21833c834864166cdbce95c5431 377 PANTHER PTHR30294 5 377 4.8E-303 T 22-04-2016 APECO1_RS22085 313f52c0de98cd4113be4693d71bcf71 169 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 169 16.674 T 22-04-2016 IPR007336 Der GTPase activator APECO1_RS22085 313f52c0de98cd4113be4693d71bcf71 169 Pfam PF04220 Der GTPase activator (YihI) 14 166 3.6E-53 T 22-04-2016 IPR007336 Der GTPase activator APECO1_RS24310 458e3b11214d50648d94deecc35f9abb 133 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 3 131 4.5E-43 T 22-04-2016 IPR019231 Protein of unknown function DUF2170 APECO1_RS01955 e39c02ac664f7b5e0d8ab20af3741469 106 Pfam PF07769 psiF repeat 27 59 1.4E-18 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat APECO1_RS01955 e39c02ac664f7b5e0d8ab20af3741469 106 Pfam PF07769 psiF repeat 71 103 6.6E-16 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat APECO1_RS22925 9779a7aa144452c933ce3f4d7c597955 51 Pfam PF12035 Protein of unknown function (DUF3521) 6 37 1.0E-13 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS19145 9aa035cad9379c51a888cbc30b00d249 153 Pfam PF04612 Type II secretion system (T2SS), protein M 2 150 6.4E-31 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 APECO1_RS19145 9aa035cad9379c51a888cbc30b00d249 153 SUPERFAMILY SSF103054 76 138 4.18E-5 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain APECO1_RS12510 f6d0c543914a154fcf3f9311f76a9c59 319 PANTHER PTHR34611 2 319 2.1E-248 T 22-04-2016 APECO1_RS12510 f6d0c543914a154fcf3f9311f76a9c59 319 PANTHER PTHR34611:SF1 2 319 2.1E-248 T 22-04-2016 APECO1_RS12510 f6d0c543914a154fcf3f9311f76a9c59 319 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 315 9.2E-51 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 APECO1_RS12510 f6d0c543914a154fcf3f9311f76a9c59 319 Pfam PF04754 Putative transposase, YhgA-like 8 209 6.8E-86 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like APECO1_RS21910 da15d38f7c85cd324222ee5d0a958364 334 Pfam PF05035 2-keto-3-deoxy-galactonokinase 11 316 1.4E-92 T 22-04-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 APECO1_RS11035 bd180c52f6e7f860cf23729601fb8437 135 Pfam PF11682 Probable zinc-ribbon 2 124 2.1E-70 T 22-04-2016 IPR021696 Protein of unknown function DUF3279 APECO1_RS13235 4af0f91445949f01c0ccc35e2f27ab9c 295 Pfam PF04492 Bacteriophage replication protein O 1 112 5.5E-21 T 22-04-2016 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 APECO1_RS08075 966b9bf5303113ec6a1e367310177e90 94 Pfam PF05488 PAAR motif 20 86 5.1E-21 T 22-04-2016 IPR008727 PAAR motif APECO1_RS05780 d11ef2152bc756a97c5753d021caccdb 60 Pfam PF07026 Protein of unknown function (DUF1317) 1 60 2.5E-39 T 22-04-2016 IPR009750 Protein of unknown function DUF1317 APECO1_RS23625 346b16d6acf54511dd85ef27c19ae5ac 68 Pfam PF11080 Protein of unknown function (DUF2622) 1 64 3.4E-21 T 22-04-2016 IPR022597 Endoribonuclease GhoS GO:0004521 APECO1_RS07490 84246535c9140de817d6e94d026b2732 162 Pfam PF14163 Super-infection exclusion protein B 21 159 1.5E-29 T 22-04-2016 IPR025982 Superinfection exclusion protein B APECO1_RS23630 4ab13bfa7f38d4245489085048fe75b8 57 Pfam PF10753 Protein of unknown function (DUF2566) 4 57 2.1E-25 T 22-04-2016 IPR019689 Toxin GhoT/OrtT APECO1_RS13450 bc9b14efdd13aa2d1a93a85705048163 415 Pfam PF02378 Phosphotransferase system, EIIC 41 267 1.9E-13 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APECO1_RS13450 bc9b14efdd13aa2d1a93a85705048163 415 PANTHER PTHR30505:SF11 20 79 8.0E-128 T 22-04-2016 APECO1_RS13450 bc9b14efdd13aa2d1a93a85705048163 415 PANTHER PTHR30505:SF11 155 406 8.0E-128 T 22-04-2016 APECO1_RS13450 bc9b14efdd13aa2d1a93a85705048163 415 PANTHER PTHR30505:SF11 95 137 8.0E-128 T 22-04-2016 APECO1_RS13450 bc9b14efdd13aa2d1a93a85705048163 415 PANTHER PTHR30505 20 79 8.0E-128 T 22-04-2016 APECO1_RS13450 bc9b14efdd13aa2d1a93a85705048163 415 PANTHER PTHR30505 155 406 8.0E-128 T 22-04-2016 APECO1_RS13450 bc9b14efdd13aa2d1a93a85705048163 415 PANTHER PTHR30505 95 137 8.0E-128 T 22-04-2016 APECO1_RS21130 fb46b0b8dfebd6ff0505eac0c1741b41 66 Pfam PF12035 Protein of unknown function (DUF3521) 1 35 1.0E-18 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS07210 47c151a3f44a870f07f31ac8cc1a04a1 81 ProDom PD059807 YMJA ECS1872 1 81 5.0E-42 T 22-04-2016 IPR020251 Uncharacterised protein family, YmjA APECO1_RS07210 47c151a3f44a870f07f31ac8cc1a04a1 81 Pfam PF10820 Protein of unknown function (DUF2543) 1 81 9.6E-49 T 22-04-2016 IPR020251 Uncharacterised protein family, YmjA APECO1_RS10630 d9b031fcf71ced807c5ed56166dae43d 585 PANTHER PTHR41287 9 90 1.2E-107 T 22-04-2016 APECO1_RS10630 d9b031fcf71ced807c5ed56166dae43d 585 PANTHER PTHR41287 109 584 1.2E-107 T 22-04-2016 APECO1_RS10630 d9b031fcf71ced807c5ed56166dae43d 585 Pfam PF03354 Phage Terminase 112 563 2.2E-84 T 22-04-2016 IPR005021 Phage terminase APECO1_RS24660 3691bc3a112b689e4110d399f97fdaaf 44 Pfam PF08052 PyrBI operon leader peptide 1 44 2.2E-34 T 22-04-2016 IPR012602 PyrBI operon leader peptide GO:0019856 APECO1_RS24660 3691bc3a112b689e4110d399f97fdaaf 44 PIRSF PIRSF003249 1 44 5.9E-36 T 22-04-2016 IPR012602 PyrBI operon leader peptide GO:0019856 APECO1_RS25020 3ff47eb6656b66d93c5cc779bf9d2e16 85 Pfam PF11823 Protein of unknown function (DUF3343) 3 56 9.3E-12 T 22-04-2016 IPR021778 Protein of unknown function DUF3343 APECO1_RS22820 e2d788c1e95d4415d8e344671f0f3c56 139 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 1 119 5.0E-56 T 22-04-2016 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 APECO1_RS22820 e2d788c1e95d4415d8e344671f0f3c56 139 Pfam PF13801 Heavy-metal resistance 9 120 1.9E-21 T 22-04-2016 IPR025961 Heavy-metal resistance protein APECO1_RS06920 346cafac1c6dcd6ec85e3d78ecc3467e 200 Pfam PF06805 Bacteriophage lambda tail assembly protein I 1 84 8.7E-29 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I APECO1_RS14935 7ccc0b00c2d244c0796a9e477b5b98e3 56 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 1 54 2.0E-24 T 22-04-2016 IPR024400 Protein of unknown function DUF2635 APECO1_RS14935 7ccc0b00c2d244c0796a9e477b5b98e3 56 Pfam PF10948 Protein of unknown function (DUF2635) 3 47 1.9E-17 T 22-04-2016 IPR024400 Protein of unknown function DUF2635 APECO1_RS08520 055cdf9c7e7fa76cb5e132fcbc33dbf9 101 Pfam PF06649 Protein of unknown function (DUF1161) 26 79 3.2E-22 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 APECO1_RS08520 055cdf9c7e7fa76cb5e132fcbc33dbf9 101 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 79 1.0E-31 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 APECO1_RS14980 14790a08ab78cf194ef998b11bb7c474 60 ProDom PD052744 YMFR MEMBRANE TRANSMEMBRANE INTEGRAL SB3 GP3 27 57 1.0E-10 T 22-04-2016 IPR020297 Protein of unknown function YmfR APECO1_RS18705 f39820378c6261cac140b2c5fee00c56 348 Pfam PF14486 Domain of unknown function (DUF4432) 29 329 8.5E-105 T 22-04-2016 IPR027839 Protein of unknown function DUF4432 APECO1_RS14895 156a90666dac553c15761d8bb291d4fc 141 Pfam PF07409 Phage protein GP46 20 124 3.5E-35 T 22-04-2016 IPR010877 Bacteriophage Mu, Gp46 APECO1_RS24580 72612661ab852dafbd9deeeaee31b755 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 1.4E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APECO1_RS24580 72612661ab852dafbd9deeeaee31b755 331 PANTHER PTHR32196 1 326 5.7E-216 T 22-04-2016 APECO1_RS24580 72612661ab852dafbd9deeeaee31b755 331 PANTHER PTHR32196:SF23 1 326 5.7E-216 T 22-04-2016 APECO1_RS14155 a47be34d598932a3c2d36bcff969b9d1 258 Pfam PF06992 Replication protein P 11 200 3.1E-44 T 22-04-2016 IPR009731 Replication P GO:0006270 APECO1_RS09760 9030c1c05bccbd63c9ee00333b30276d 47 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 1.3E-30 T 22-04-2016 IPR019672 Protein of unknown function DUF2627 APECO1_RS11545 1eada236925076dbe9f648e8ff77a910 238 Pfam PF06889 Protein of unknown function (DUF1266) 65 229 2.7E-20 T 22-04-2016 IPR009677 Protein of unknown function DUF1266 APECO1_RS04445 f87292f3eacc7e9710aa8bc20aecc32e 99 ProDom PD067735 GP81 ORF2 GPA 5'REGION ORF81 1 99 1.0E-40 T 22-04-2016 APECO1_RS11405 e747b052152250b72aa2dac907b35524 406 TIGRFAM TIGR04010 WcaD: putative colanic acid polymerase WcaD 1 403 1.4E-262 T 22-04-2016 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD UniPathway: UPA00936 APECO1_RS13165 36e317ad4e22364c61520079076e4be7 107 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 2 103 7.3E-38 T 22-04-2016 IPR006481 Bacteriophage lambda, GpS, holin APECO1_RS13165 36e317ad4e22364c61520079076e4be7 107 Pfam PF05106 Phage holin family (Lysis protein S) 8 98 5.9E-28 T 22-04-2016 IPR006481 Bacteriophage lambda, GpS, holin APECO1_RS23750 93517e2765bef7b38b613cb1161444b4 243 Pfam PF11726 Protein of unknown function (DUF3296) 15 233 9.7E-42 T 22-04-2016 IPR021723 Inovirus Gp2 APECO1_RS17100 62525c09691df928d9cffaffb028d20a 65 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 4 65 2.5E-40 T 22-04-2016 IPR009301 Protein of unknown function DUF957 APECO1_RS01700 2cac63611dc3b8e58a52dd45a579bb9e 165 Pfam PF06496 Protein of unknown function (DUF1097) 9 152 8.2E-28 T 22-04-2016 IPR009476 Protein of unknown function DUF1097 APECO1_RS19225 04826ee02de2e8ea82315341ca3f5b4e 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 6.1E-32 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 APECO1_RS19225 04826ee02de2e8ea82315341ca3f5b4e 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 54 2.5E-18 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 APECO1_RS10610 70df9843ae9149e5f2cebecd42eb1626 405 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 3 403 5.9E-105 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 APECO1_RS10610 70df9843ae9149e5f2cebecd42eb1626 405 Pfam PF05065 Phage capsid family 126 403 5.5E-70 T 22-04-2016 IPR024455 Phage capsid APECO1_RS10610 70df9843ae9149e5f2cebecd42eb1626 405 SUPERFAMILY SSF56563 119 405 5.1E-64 T 22-04-2016 APECO1_RS22405 e81e68988795aeb2ce9835959f9626ea 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.505 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 APECO1_RS22405 e81e68988795aeb2ce9835959f9626ea 79 Pfam PF06005 Protein of unknown function (DUF904) 1 78 2.6E-25 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 APECO1_RS11700 4f44aadf94c930ae296976c9ae03070e 110 PIRSF PIRSF007004 1 110 7.9E-76 T 22-04-2016 IPR016501 Uncharacterised conserved protein UCP007004 APECO1_RS15130 b63ee8c07641d312eb5b718f76139aca 108 Pfam PF14213 Domain of unknown function (DUF4325) 25 91 8.6E-17 T 22-04-2016 IPR025474 Domain of unknown function DUF4325 APECO1_RS02370 4b1992cc739bbd4abc2c29024c419fc9 53 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 7.7E-24 T 22-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related APECO1_RS08270 fb6758e5892edbb1cf5656b4b6bbf4ca 65 Pfam PF17073 Two-component-system connector protein 1 65 6.3E-46 T 22-04-2016 IPR031411 Two-component-system connector protein SafA APECO1_RS14925 58e17a50feb463d32d5a899c9cd2f73a 118 Pfam PF10618 Phage tail tube protein 1 115 2.0E-39 T 22-04-2016 IPR019596 Bacteriophage Mu, GpM, tail tube APECO1_RS04525 0136d1ff2c4ea50243e81a942fda34db 155 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 5.6E-45 T 22-04-2016 IPR009678 Bacteriophage tail completion protein R APECO1_RS06785 a0888a57e778be76e34b3574ca488bce 71 Pfam PF04971 Bacteriophage P21 holin S 4 71 6.1E-42 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS06785 a0888a57e778be76e34b3574ca488bce 71 PIRSF PIRSF030786 1 71 2.8E-48 T 22-04-2016 IPR007054 Lysis protein S APECO1_RS10575 9864c7d7ee110061cb43580e5fee6401 92 Pfam PF13227 Protein of unknown function (DUF4035) 28 74 4.3E-18 T 22-04-2016 IPR025116 Protein of unknown function DUF4035 APECO1_RS06225 428476f76776efe280c6a6c7acde0733 133 Gene3D G3DSA:2.60.120.380 37 130 3.0E-5 T 22-04-2016 APECO1_RS06225 428476f76776efe280c6a6c7acde0733 133 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 48 111 2.5E-7 T 22-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial APECO1_RS17675 1e5087778c85c4bd82c5db4cfe1124f6 223 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 223 36.617 T 22-04-2016 IPR009576 Biofilm formation YgiB APECO1_RS17675 1e5087778c85c4bd82c5db4cfe1124f6 223 Pfam PF06693 Protein of unknown function (DUF1190) 41 210 4.2E-57 T 22-04-2016 IPR009576 Biofilm formation YgiB APECO1_RS25135 0b46369655883916b2f6a69fc8c346f3 163 Pfam PF10696 Protein of unknown function (DUF2501) 83 161 4.0E-27 T 22-04-2016 IPR019637 Protein of unknown function DUF2501 APECO1_RS11445 7ba063076e7397c2450ea714a651ac67 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 102 4.3E-26 T 22-04-2016 IPR009241 Toxin HigB-like APECO1_RS23525 55ea6039a33005947121faa87fe3c2ea 292 Pfam PF13990 YjcZ-like protein 21 287 2.9E-134 T 22-04-2016 IPR025599 YjcZ-like protein APECO1_RS08820 e3384b3d27ef2cef6db9e0a4b0ac2877 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 70 4.2E-14 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 APECO1_RS19715 033a24433cc42d8c1d59ddb72aec67a7 164 SUPERFAMILY SSF160631 61 161 1.15E-5 T 22-04-2016 APECO1_RS02095 258ae3881d854c1d90e7c3ef24b030ce 179 Pfam PF11622 Protein of unknown function (DUF3251) 20 176 1.3E-78 T 22-04-2016 IPR021658 Domain of unknown function DUF3251 APECO1_RS02095 258ae3881d854c1d90e7c3ef24b030ce 179 Gene3D G3DSA:2.60.40.1620 43 177 1.5E-69 T 22-04-2016 IPR021658 Domain of unknown function DUF3251 APECO1_RS06000 33b937a82b6928ad5d62a1ce4e0c824b 124 Pfam PF14000 DNA packaging protein FI 3 120 8.3E-16 T 22-04-2016 IPR025147 DNA packaging protein FI APECO1_RS17995 57536dbc1759b9a83d3c1caa52adcc38 134 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 1.8E-22 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III APECO1_RS23050 064705018c8c47f10c8f61aaadf1e052 306 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 76 209 1.5E-50 T 22-04-2016 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 APECO1_RS20820 16c7ca11a5064cc0ee7e4de488a9c792 274 Pfam PF02498 BRO family, N-terminal domain 10 101 1.1E-6 T 22-04-2016 IPR003497 BRO N-terminal domain APECO1_RS05755 ea0f5e4f659f67519e2757a4d86c8973 108 Gene3D G3DSA:3.10.480.10 4 39 9.5E-4 T 22-04-2016 APECO1_RS04530 568a5085a6f484f1f78061aa99406db6 150 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 148 1.0E-34 T 22-04-2016 IPR006522 Phage virion morphogensis protein APECO1_RS04530 568a5085a6f484f1f78061aa99406db6 150 Pfam PF05069 Phage virion morphogenesis family 3 149 1.4E-42 T 22-04-2016 IPR006522 Phage virion morphogensis protein APECO1_RS01365 284b950588583588130af7e86ffbb75c 133 Pfam PF07417 Transcriptional regulator Crl 5 122 2.8E-54 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 APECO1_RS01365 284b950588583588130af7e86ffbb75c 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 32.458 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 APECO1_RS14920 0c888560609259d144660771cf4b8702 89 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 4 86 1.9E-15 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative APECO1_RS17095 12b42391435a6865254e6058d4c7491f 162 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 55 6.0E-22 T 22-04-2016 APECO1_RS23385 22702d79c7e325e26d37c3cfecba16b4 91 Pfam PF17090 Uncharacterised protein family 30 91 5.0E-16 T 22-04-2016 IPR031381 Uncharacterised protein YtcA APECO1_RS11105 2c24b859e8c262a21682d07cd09b172f 301 Pfam PF13990 YjcZ-like protein 26 296 2.1E-70 T 22-04-2016 IPR025599 YjcZ-like protein APECO1_RS07705 a86ccb88430d01c36132f319f5fe1e48 202 Pfam PF06805 Bacteriophage lambda tail assembly protein I 1 84 2.0E-28 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I APECO1_RS21845 3831c5888fedb26f394af969be5cdb3c 129 Gene3D G3DSA:3.10.490.10 3 80 9.7E-7 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APECO1_RS04130 c72a2e1ee2eb49ed2e97c069924100f1 95 Pfam PF07214 Protein of unknown function (DUF1418) 1 92 8.3E-37 T 22-04-2016 IPR010815 Protein of unknown function DUF1418 APECO1_RS12915 91e1448430b8bd11e83b55851e58eead 182 Pfam PF04315 Elongation factor P hydroxylase 13 175 5.3E-81 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- APECO1_RS09330 d9b4716e39b234cfed35d1f4009518b1 63 Pfam PF12035 Protein of unknown function (DUF3521) 10 38 4.6E-11 T 22-04-2016 IPR021909 Protein of unknown function DUF3521 APECO1_RS05750 970691c586268392308a3c8b02bd0497 79 Pfam PF13973 Domain of unknown function (DUF4222) 4 53 1.7E-18 T 22-04-2016 IPR025317 Protein of unknown function DUF4222 APECO1_RS01235 085fa6ef17c9ef90f72c659a91609c6e 348 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 27 320 1.1E-75 T 22-04-2016 IPR018683 Domain of unknown function DUF2169 APECO1_RS11310 f59a97c2d65b08a69c0acc60ed21d4bf 412 Pfam PF01943 Polysaccharide biosynthesis protein 15 277 4.4E-37 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APECO1_RS21075 f76b70b7bdd7bb1a840e61bf089a60cd 86 Pfam PF07119 Protein of unknown function (DUF1375) 9 52 3.0E-7 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 APECO1_RS21015 22907842064db6456ba1905c883dbdc9 32 Pfam PF08049 IlvB leader peptide 1 32 1.4E-18 T 22-04-2016 IPR012566 IlvB leader peptide APECO1_RS14650 d6fbb126c177527a4afe39f00a294c08 134 Pfam PF01548 Transposase 8 107 6.2E-17 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APECO1_RS18000 ec625046f4167fc1b9472289d412e6f8 99 Pfam PF13997 YqjK-like protein 14 86 2.5E-27 T 22-04-2016 IPR025612 YqjK-like protein APECO1_RS22245 bc4ae5a5f30779594be6b1bcd2b06f3a 64 Pfam PF12889 Protein of unknown function (DUF3829) 2 60 5.2E-20 T 22-04-2016 IPR024291 Protein of unknown function DUF3829 APECO1_RS19415 41924a223600c5ea81790aa309652585 134 Pfam PF10748 Protein of unknown function (DUF2531) 3 134 6.6E-68 T 22-04-2016 IPR019684 Protein of unknown function DUF2531 APECO1_RS10655 5f8365852a4f21d8a8cd592f07a6eb9f 116 Pfam PF07041 Protein of unknown function (DUF1327) 1 112 1.9E-58 T 22-04-2016 IPR009759 Bacteriophage ES18, Gp24 APECO1_RS19330 76ba5d1213b18a531b417abd1f61de8f 55 Pfam PF13978 Protein of unknown function (DUF4223) 1 54 9.2E-36 T 22-04-2016 IPR025318 Protein of unknown function DUF4223 APECO1_RS11650 86a2623d007900f63a23db706b9b2641 751 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 133 514 1.4E-145 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 APECO1_RS23675 80def2c2ea0fc652db274a3736270f73 65 ProDom PD054142 YEEW L0008-LIKE GENOME ECS4540 C4577 AEC77 ECS1407 Z5092 C1289 L0008 5 65 1.0E-24 T 22-04-2016