locus-tag class description AM340_RS00010 PF01029 NusB family AM340_RS00015 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM340_RS00020 PF01872 RibD C-terminal domain AM340_RS00020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM340_RS00025 PF03477 ATP cone domain AM340_RS00035 PF01385 Probable transposase AM340_RS00035 PF07282 Putative transposase DNA-binding domain AM340_RS00035 PF12323 Helix-turn-helix domain AM340_RS00055 PF03502 Nucleoside-specific channel-forming protein, Tsx AM340_RS00060 PF01844 HNH endonuclease AM340_RS00070 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AM340_RS00075 PF07549 SecD/SecF GG Motif AM340_RS00075 PF02355 Protein export membrane protein AM340_RS00080 PF13721 SecD export protein N-terminal TM region AM340_RS00080 PF02355 Protein export membrane protein AM340_RS00080 PF07549 SecD/SecF GG Motif AM340_RS00085 PF02699 Preprotein translocase subunit AM340_RS00090 PF01702 Queuine tRNA-ribosyltransferase AM340_RS00095 PF02547 Queuosine biosynthesis protein AM340_RS00100 PF04336 Acyl carrier protein phosphodiesterase AM340_RS00110 PF02903 Alpha amylase, N-terminal ig-like domain AM340_RS00110 PF00128 Alpha amylase, catalytic domain AM340_RS00115 PF00324 Amino acid permease AM340_RS00120 PF05525 Branched-chain amino acid transport protein AM340_RS00125 PF11808 Phosphate regulon sensor protein PhoR AM340_RS00125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS00125 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS00125 PF00989 PAS fold AM340_RS00130 PF00072 Response regulator receiver domain AM340_RS00130 PF00486 Transcriptional regulatory protein, C terminal AM340_RS00135 PF12320 Type 5 capsule protein repressor C-terminal domain AM340_RS00135 PF00149 Calcineurin-like phosphoesterase AM340_RS00140 PF13476 AAA domain AM340_RS00145 PF07690 Major Facilitator Superfamily AM340_RS00150 PF00480 ROK family AM340_RS00155 PF04381 Putative exonuclease, RdgC AM340_RS00160 PF10971 Protein of unknown function (DUF2773) AM340_RS00170 PF06865 Pyrimidine/purine nucleoside phosphorylase AM340_RS00175 PF07302 AroM protein AM340_RS00180 PF16362 YaiA protein AM340_RS00185 PF01202 Shikimate kinase AM340_RS00190 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM340_RS00195 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM340_RS00195 PF03807 NADP oxidoreductase coenzyme F420-dependent AM340_RS00200 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS00200 PF05230 MASE2 domain AM340_RS00205 PF07769 psiF repeat AM340_RS00210 PF00245 Alkaline phosphatase AM340_RS00215 PF10796 Sigma-S stabilisation anti-adaptor protein AM340_RS00220 PF07478 D-ala D-ala ligase C-terminus AM340_RS00220 PF01820 D-ala D-ala ligase N-terminus AM340_RS00225 PF10953 Protein of unknown function (DUF2754) AM340_RS00235 PF10954 Protein of unknown function (DUF2755) AM340_RS00240 PF07759 Protein of unknown function (DUF1615) AM340_RS00245 PF05992 SbmA/BacA-like family AM340_RS00255 PF00144 Beta-lactamase AM340_RS00260 PF15977 Winged helix-turn-helix DNA binding AM340_RS00265 PF03212 Pertactin AM340_RS00265 PF03797 Autotransporter beta-domain AM340_RS00270 PF00490 Delta-aminolevulinic acid dehydratase AM340_RS00275 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM340_RS00285 PF00005 ABC transporter AM340_RS00290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM340_RS00295 PF02585 GlcNAc-PI de-N-acetylase AM340_RS00300 PF00535 Glycosyl transferase family 2 AM340_RS00305 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS00315 PF02583 Metal-sensitive transcriptional repressor AM340_RS00320 PF00107 Zinc-binding dehydrogenase AM340_RS00320 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS00325 PF00756 Putative esterase AM340_RS00330 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM340_RS00340 PF00682 HMGL-like AM340_RS00340 PF07836 DmpG-like communication domain AM340_RS00345 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AM340_RS00345 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM340_RS00350 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM340_RS00355 PF12697 Alpha/beta hydrolase family AM340_RS00360 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM340_RS00365 PF01494 FAD binding domain AM340_RS00370 PF09339 IclR helix-turn-helix domain AM340_RS00370 PF01614 Bacterial transcriptional regulator AM340_RS00375 PF00356 Bacterial regulatory proteins, lacI family AM340_RS00385 PF16353 Domain of unknown function(DUF4981) AM340_RS00385 PF00703 Glycosyl hydrolases family 2 AM340_RS00385 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM340_RS00385 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM340_RS00385 PF02929 Beta galactosidase small chain AM340_RS00390 PF01306 LacY proton/sugar symporter AM340_RS00395 PF12464 Maltose acetyltransferase AM340_RS00395 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS00400 PF07690 Major Facilitator Superfamily AM340_RS00405 PF02560 Cyanate lyase C-terminal domain AM340_RS00410 PF00484 Carbonic anhydrase AM340_RS00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS00415 PF03466 LysR substrate binding domain AM340_RS00420 PF07969 Amidohydrolase family AM340_RS00425 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM340_RS00430 PF13193 AMP-binding enzyme C-terminal domain AM340_RS00430 PF00501 AMP-binding enzyme AM340_RS00430 PF16177 Acetyl-coenzyme A synthetase N-terminus AM340_RS00435 PF03972 MmgE/PrpD family AM340_RS00440 PF00285 Citrate synthase, C-terminal domain AM340_RS00450 PF00158 Sigma-54 interaction domain AM340_RS00450 PF06506 Propionate catabolism activator AM340_RS00450 PF02954 Bacterial regulatory protein, Fis family AM340_RS00455 PF07338 Protein of unknown function (DUF1471) AM340_RS00460 PF01810 LysE type translocator AM340_RS00475 PF00107 Zinc-binding dehydrogenase AM340_RS00475 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS00480 PF02653 Branched-chain amino acid transport system / permease component AM340_RS00485 PF02653 Branched-chain amino acid transport system / permease component AM340_RS00490 PF00005 ABC transporter AM340_RS00495 PF13407 Periplasmic binding protein domain AM340_RS00505 PF07969 Amidohydrolase family AM340_RS00510 PF00696 Amino acid kinase family AM340_RS00515 PF06545 Protein of unknown function (DUF1116) AM340_RS00520 PF00549 CoA-ligase AM340_RS00520 PF02629 CoA binding domain AM340_RS00525 PF11392 Protein of unknown function (DUF2877) AM340_RS00530 PF12796 Ankyrin repeats (3 copies) AM340_RS00540 PF06496 Protein of unknown function (DUF1097) AM340_RS00545 PF03466 LysR substrate binding domain AM340_RS00545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS00550 PF00563 EAL domain AM340_RS00550 PF00196 Bacterial regulatory proteins, luxR family AM340_RS00555 PF02028 BCCT, betaine/carnitine/choline family transporter AM340_RS00565 PF00440 Bacterial regulatory proteins, tetR family AM340_RS00565 PF13977 BetI-type transcriptional repressor, C-terminal AM340_RS00570 PF00171 Aldehyde dehydrogenase family AM340_RS00575 PF05199 GMC oxidoreductase AM340_RS00575 PF00732 GMC oxidoreductase AM340_RS00595 PF02589 LUD domain AM340_RS00600 PF11870 Domain of unknown function (DUF3390) AM340_RS00600 PF02589 LUD domain AM340_RS00600 PF13183 4Fe-4S dicluster domain AM340_RS00605 PF02754 Cysteine-rich domain AM340_RS00610 PF12833 Helix-turn-helix domain AM340_RS00610 PF12852 Cupin AM340_RS00615 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS00615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM340_RS00620 PF07338 Protein of unknown function (DUF1471) AM340_RS00625 PF04224 Protein of unknown function, DUF417 AM340_RS00630 PF00248 Aldo/keto reductase family AM340_RS00635 PF12833 Helix-turn-helix domain AM340_RS00645 PF00248 Aldo/keto reductase family AM340_RS00650 PF00248 Aldo/keto reductase family AM340_RS00655 PF03466 LysR substrate binding domain AM340_RS00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS00660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS00660 PF03466 LysR substrate binding domain AM340_RS00665 PF12146 Serine aminopeptidase, S33 AM340_RS00670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM340_RS00685 PF01197 Ribosomal protein L31 AM340_RS00690 PF00444 Ribosomal protein L36 AM340_RS00700 PF00196 Bacterial regulatory proteins, luxR family AM340_RS00710 PF18649 EcpB C-terminal domain AM340_RS00715 PF16967 E-set like domain AM340_RS00715 PF15976 CS1-pili formation C-terminal AM340_RS00740 PF03692 Putative zinc- or iron-chelating domain AM340_RS00745 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM340_RS00750 PF07274 Protein of unknown function (DUF1440) AM340_RS00765 PF00171 Aldehyde dehydrogenase family AM340_RS00770 PF01472 PUA domain AM340_RS00770 PF00696 Amino acid kinase family AM340_RS00775 PF00267 Gram-negative porin AM340_RS00780 PF07417 Sigma factor-binding transcriptional regulator Crl AM340_RS00785 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AM340_RS00790 PF00156 Phosphoribosyl transferase domain AM340_RS00795 PF07687 Peptidase dimerisation domain AM340_RS00795 PF01546 Peptidase family M20/M25/M40 AM340_RS00800 PF00472 RF-1 domain AM340_RS00810 PF13673 Acetyltransferase (GNAT) domain AM340_RS00815 PF11798 IMS family HHH motif AM340_RS00815 PF00817 impB/mucB/samB family AM340_RS00815 PF11799 impB/mucB/samB family C-terminal domain AM340_RS00820 PF00691 OmpA family AM340_RS00820 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM340_RS00835 PF00877 NlpC/P60 family AM340_RS00840 PF04221 RelB antitoxin AM340_RS00845 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AM340_RS00850 PF03734 L,D-transpeptidase catalytic domain AM340_RS00855 PF13230 Glutamine amidotransferases class-II AM340_RS00860 PF13580 SIS domain AM340_RS00865 PF09317 Domain of unknown function (DUF1974) AM340_RS00865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM340_RS00865 PF02770 Acyl-CoA dehydrogenase, middle domain AM340_RS00865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM340_RS00875 PF00795 Carbon-nitrogen hydrolase AM340_RS00885 PF00929 Exonuclease AM340_RS00890 PF00075 RNase H AM340_RS00895 PF08241 Methyltransferase domain AM340_RS00900 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM340_RS00900 PF00753 Metallo-beta-lactamase superfamily AM340_RS00905 PF01464 Transglycosylase SLT domain AM340_RS00905 PF01476 LysM domain AM340_RS00910 PF08241 Methyltransferase domain AM340_RS00915 PF03372 Endonuclease/Exonuclease/phosphatase family AM340_RS00920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS00920 PF03466 LysR substrate binding domain AM340_RS00925 PF00248 Aldo/keto reductase family AM340_RS00965 PF00005 ABC transporter AM340_RS00965 PF09383 NIL domain AM340_RS00970 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS00975 PF03180 NLPA lipoprotein AM340_RS00980 PF16358 RcsF lipoprotein AM340_RS00985 PF18389 TrmO C-terminal domain AM340_RS00985 PF01980 tRNA-methyltransferase O AM340_RS00990 PF03129 Anticodon binding domain AM340_RS00990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM340_RS00990 PF04073 Aminoacyl-tRNA editing domain AM340_RS01000 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS01015 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM340_RS01020 PF04170 NlpE N-terminal domain AM340_RS01020 PF17185 NlpE C-terminal OB domain AM340_RS01025 PF00472 RF-1 domain AM340_RS01030 PF07152 YaeQ protein AM340_RS01035 PF06786 Uncharacterised protein family (UPF0253) AM340_RS01040 PF07073 Modulator of Rho-dependent transcription termination (ROF) AM340_RS01045 PF11734 TilS substrate C-terminal domain AM340_RS01045 PF09179 TilS substrate binding domain AM340_RS01045 PF01171 PP-loop family AM340_RS01050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM340_RS01055 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM340_RS01055 PF01276 Orn/Lys/Arg decarboxylase, major domain AM340_RS01055 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM340_RS01060 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM340_RS01065 PF02811 PHP domain AM340_RS01065 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM340_RS01065 PF14579 Helix-hairpin-helix motif AM340_RS01065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM340_RS01065 PF01336 OB-fold nucleic acid binding domain AM340_RS01070 PF01351 Ribonuclease HII AM340_RS01075 PF02684 Lipid-A-disaccharide synthetase AM340_RS01080 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM340_RS01080 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS01085 PF07977 FabA-like domain AM340_RS01090 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS01090 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM340_RS01095 PF03938 Outer membrane protein (OmpH-like) AM340_RS01100 PF07244 Surface antigen variable number repeat AM340_RS01100 PF01103 Surface antigen AM340_RS01105 PF02163 Peptidase family M50 AM340_RS01105 PF17820 PDZ domain AM340_RS01115 PF01255 Putative undecaprenyl diphosphate synthase AM340_RS01120 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM340_RS01120 PF13288 DXP reductoisomerase C-terminal domain AM340_RS01120 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM340_RS01125 PF01765 Ribosome recycling factor AM340_RS01130 PF00696 Amino acid kinase family AM340_RS01135 PF00889 Elongation factor TS AM340_RS01140 PF00318 Ribosomal protein S2 AM340_RS01150 PF00557 Metallopeptidase family M24 AM340_RS01155 PF01966 HD domain AM340_RS01155 PF01909 Nucleotidyltransferase domain AM340_RS01155 PF01842 ACT domain AM340_RS01155 PF08335 GlnD PII-uridylyltransferase AM340_RS01160 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM340_RS01160 PF14602 Hexapeptide repeat of succinyl-transferase AM340_RS01160 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS01165 PF11944 Protein of unknown function (DUF3461) AM340_RS01170 PF17853 GGDEF-like domain AM340_RS01170 PF05651 Putative sugar diacid recognition AM340_RS01170 PF13556 PucR C-terminal helix-turn-helix domain AM340_RS01175 PF00595 PDZ domain AM340_RS01185 PF01966 HD domain AM340_RS01185 PF13286 Phosphohydrolase-associated domain AM340_RS01190 PF01048 Phosphorylase superfamily AM340_RS01195 PF01497 Periplasmic binding protein AM340_RS01200 PF03458 UPF0126 domain AM340_RS01205 PF01521 Iron-sulphur cluster biosynthesis AM340_RS01210 PF00654 Voltage gated chloride channel AM340_RS01215 PF00202 Aminotransferase class-III AM340_RS01220 PF01032 FecCD transport family AM340_RS01225 PF01497 Periplasmic binding protein AM340_RS01230 PF00005 ABC transporter AM340_RS01235 PF07715 TonB-dependent Receptor Plug Domain AM340_RS01235 PF00593 TonB dependent receptor AM340_RS01240 PF14814 Bifunctional transglycosylase second domain AM340_RS01240 PF00905 Penicillin binding protein transpeptidase domain AM340_RS01240 PF00912 Transglycosylase AM340_RS01240 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AM340_RS01245 PF00270 DEAD/DEAH box helicase AM340_RS01245 PF04408 Helicase associated domain (HA2) AM340_RS01245 PF08482 ATP-dependent helicase C-terminal AM340_RS01245 PF00271 Helicase conserved C-terminal domain AM340_RS01250 PF02834 LigT like Phosphoesterase AM340_RS01255 PF03749 Sugar fermentation stimulation protein RE domain AM340_RS01255 PF17746 SfsA N-terminal OB domain AM340_RS01260 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM340_RS01265 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM340_RS01270 PF12627 Probable RNA and SrmB- binding site of polymerase A AM340_RS01270 PF01743 Poly A polymerase head domain AM340_RS01270 PF12626 Polymerase A arginine-rich C-terminus AM340_RS01275 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM340_RS01280 PF00419 Fimbrial protein AM340_RS01285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS01285 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS01290 PF13954 PapC N-terminal domain AM340_RS01290 PF13953 PapC C-terminal domain AM340_RS01290 PF00577 Outer membrane usher protein AM340_RS01295 PF00419 Fimbrial protein AM340_RS01300 PF00419 Fimbrial protein AM340_RS01305 PF00419 Fimbrial protein AM340_RS01320 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS01340 PF02548 Ketopantoate hydroxymethyltransferase AM340_RS01345 PF02569 Pantoate-beta-alanine ligase AM340_RS01355 PF04754 Putative transposase, YhgA-like AM340_RS01370 PF02261 Aspartate decarboxylase AM340_RS01375 PF01522 Polysaccharide deacetylase AM340_RS01380 PF03610 PTS system fructose IIA component AM340_RS01385 PF01061 ABC-2 type transporter AM340_RS01390 PF00005 ABC transporter AM340_RS01395 PF00484 Carbonic anhydrase AM340_RS01400 PF00156 Phosphoribosyl transferase domain AM340_RS01405 PF01011 PQQ enzyme repeat AM340_RS01410 PF07731 Multicopper oxidase AM340_RS01410 PF07732 Multicopper oxidase AM340_RS01410 PF00394 Multicopper oxidase AM340_RS01415 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM340_RS01420 PF17284 Spermidine synthase tetramerisation domain AM340_RS01425 PF02675 S-adenosylmethionine decarboxylase AM340_RS01430 PF06062 Uncharacterised protein family (UPF0231) AM340_RS01435 PF06434 Aconitate hydratase 2 N-terminus AM340_RS01435 PF11791 Aconitate B N-terminal domain AM340_RS01435 PF00330 Aconitase family (aconitate hydratase) AM340_RS01450 PF11737 Protein of unknown function (DUF3300) AM340_RS01455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM340_RS01455 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS01460 PF00364 Biotin-requiring enzyme AM340_RS01460 PF02817 e3 binding domain AM340_RS01460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM340_RS01465 PF00456 Transketolase, thiamine diphosphate binding domain AM340_RS01465 PF17831 Pyruvate dehydrogenase E1 component middle domain AM340_RS01470 PF00392 Bacterial regulatory proteins, gntR family AM340_RS01470 PF07729 FCD domain AM340_RS01475 PF00324 Amino acid permease AM340_RS01480 PF17113 Regulatory signalling modulator protein AmpE AM340_RS01485 PF01510 N-acetylmuramoyl-L-alanine amidase AM340_RS01490 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM340_RS01490 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM340_RS01500 PF07963 Prokaryotic N-terminal methylation motif AM340_RS01505 PF00437 Type II/IV secretion system protein AM340_RS01505 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM340_RS01510 PF00482 Type II secretion system (T2SS), protein F AM340_RS01515 PF00478 IMP dehydrogenase / GMP reductase domain AM340_RS01520 PF01121 Dephospho-CoA kinase AM340_RS01525 PF07072 Cell division protein AM340_RS01530 PF03884 DNA gyrase inhibitor YacG AM340_RS01535 PF00293 NUDIX domain AM340_RS01540 PF01043 SecA preprotein cross-linking domain AM340_RS01540 PF07517 SecA DEAD-like domain AM340_RS01540 PF07516 SecA Wing and Scaffold domain AM340_RS01540 PF02810 SEC-C motif AM340_RS01545 PF06558 Secretion monitor precursor protein (SecM) AM340_RS01550 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM340_RS01555 PF12327 FtsZ family, C-terminal domain AM340_RS01555 PF00091 Tubulin/FtsZ family, GTPase domain AM340_RS01560 PF02491 SHS2 domain inserted in FTSA AM340_RS01565 PF03799 Cell division protein FtsQ AM340_RS01565 PF08478 POTRA domain, FtsQ-type AM340_RS01570 PF07478 D-ala D-ala ligase C-terminus AM340_RS01570 PF01820 D-ala D-ala ligase N-terminus AM340_RS01575 PF02875 Mur ligase family, glutamate ligase domain AM340_RS01575 PF01225 Mur ligase family, catalytic domain AM340_RS01575 PF08245 Mur ligase middle domain AM340_RS01580 PF04101 Glycosyltransferase family 28 C-terminal domain AM340_RS01580 PF03033 Glycosyltransferase family 28 N-terminal domain AM340_RS01585 PF01098 Cell cycle protein AM340_RS01590 PF02875 Mur ligase family, glutamate ligase domain AM340_RS01590 PF08245 Mur ligase middle domain AM340_RS01595 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM340_RS01595 PF00953 Glycosyl transferase family 4 AM340_RS01600 PF01225 Mur ligase family, catalytic domain AM340_RS01600 PF02875 Mur ligase family, glutamate ligase domain AM340_RS01600 PF08245 Mur ligase middle domain AM340_RS01605 PF02875 Mur ligase family, glutamate ligase domain AM340_RS01605 PF08245 Mur ligase middle domain AM340_RS01605 PF01225 Mur ligase family, catalytic domain AM340_RS01610 PF00905 Penicillin binding protein transpeptidase domain AM340_RS01610 PF03717 Penicillin-binding Protein dimerisation domain AM340_RS01615 PF04999 Cell division protein FtsL AM340_RS01620 PF01795 MraW methylase family AM340_RS01625 PF02381 MraZ protein, putative antitoxin-like AM340_RS01630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM340_RS01630 PF00356 Bacterial regulatory proteins, lacI family AM340_RS01640 PF10369 Small subunit of acetolactate synthase AM340_RS01645 PF00205 Thiamine pyrophosphate enzyme, central domain AM340_RS01645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM340_RS01645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM340_RS01650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS01650 PF03466 LysR substrate binding domain AM340_RS01655 PF08054 Leucine operon leader peptide AM340_RS01660 PF08502 LeuA allosteric (dimerisation) domain AM340_RS01660 PF00682 HMGL-like AM340_RS01665 PF00180 Isocitrate/isopropylmalate dehydrogenase AM340_RS01670 PF00330 Aconitase family (aconitate hydratase) AM340_RS01675 PF00694 Aconitase C-terminal domain AM340_RS01685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS01685 PF12793 Sugar transport-related sRNA regulator N-term AM340_RS01700 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS01705 PF00005 ABC transporter AM340_RS01710 PF09335 SNARE associated Golgi protein AM340_RS01725 PF02311 AraC-like ligand binding domain AM340_RS01725 PF12833 Helix-turn-helix domain AM340_RS01735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM340_RS01740 PF11762 L-arabinose isomerase C-terminal domain AM340_RS01740 PF02610 L-arabinose isomerase AM340_RS01745 PF00596 Class II Aldolase and Adducin N-terminal domain AM340_RS01750 PF00136 DNA polymerase family B AM340_RS01750 PF03104 DNA polymerase family B, exonuclease domain AM340_RS01755 PF12137 RNA polymerase recycling family C-terminal AM340_RS01755 PF18339 RapA N-terminal Tudor like domain 1 AM340_RS01755 PF18337 RapA N-terminal Tudor like domain AM340_RS01755 PF00176 SNF2 family N-terminal domain AM340_RS01755 PF00271 Helicase conserved C-terminal domain AM340_RS01760 PF00849 RNA pseudouridylate synthase AM340_RS01765 PF00226 DnaJ domain AM340_RS01765 PF05099 Tellurite resistance protein TerB AM340_RS01770 PF04453 LPS transport system D AM340_RS01770 PF03968 OstA-like protein AM340_RS01775 PF09312 SurA N-terminal domain AM340_RS01775 PF00639 PPIC-type PPIASE domain AM340_RS01780 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM340_RS01785 PF00398 Ribosomal RNA adenine dimethylase AM340_RS01790 PF04379 ApaG domain AM340_RS01795 PF00149 Calcineurin-like phosphoesterase AM340_RS01810 PF00186 Dihydrofolate reductase AM340_RS01815 PF00999 Sodium/hydrogen exchanger family AM340_RS01815 PF02254 TrkA-N domain AM340_RS01820 PF02525 Flavodoxin-like fold AM340_RS01825 PF00083 Sugar (and other) transporter AM340_RS01835 PF01494 FAD binding domain AM340_RS01840 PF00766 Electron transfer flavoprotein FAD-binding domain AM340_RS01840 PF01012 Electron transfer flavoprotein domain AM340_RS01845 PF01012 Electron transfer flavoprotein domain AM340_RS01850 PF02028 BCCT, betaine/carnitine/choline family transporter AM340_RS01855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM340_RS01855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM340_RS01855 PF02770 Acyl-CoA dehydrogenase, middle domain AM340_RS01860 PF02515 CoA-transferase family III AM340_RS01865 PF00501 AMP-binding enzyme AM340_RS01865 PF13193 AMP-binding enzyme C-terminal domain AM340_RS01870 PF00378 Enoyl-CoA hydratase/isomerase AM340_RS01875 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS01880 PF07180 CaiF/GrlA transcriptional regulator AM340_RS01885 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM340_RS01885 PF02142 MGS-like domain AM340_RS01885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM340_RS01890 PF00117 Glutamine amidotransferase class-I AM340_RS01890 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM340_RS01900 PF05173 Dihydrodipicolinate reductase, C-terminus AM340_RS01900 PF01113 Dihydrodipicolinate reductase, N-terminus AM340_RS01905 PF01156 Inosine-uridine preferring nucleoside hydrolase AM340_RS01910 PF02401 LytB protein AM340_RS01915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM340_RS01920 PF01252 Signal peptidase (SPase) II AM340_RS01925 PF06827 Zinc finger found in FPG and IleRS AM340_RS01925 PF00133 tRNA synthetases class I (I, L, M and V) AM340_RS01925 PF08264 Anticodon-binding domain of tRNA AM340_RS01930 PF06574 FAD synthetase AM340_RS01930 PF01687 Riboflavin kinase AM340_RS01935 PF10837 Protein of unknown function (DUF2575) AM340_RS01940 PF01649 Ribosomal protein S20 AM340_RS01955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS01955 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS01970 PF03466 LysR substrate binding domain AM340_RS01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS01975 PF06965 Na+/H+ antiporter 1 AM340_RS01985 PF00884 Sulfatase AM340_RS01985 PF16385 Domain of unknown function AM340_RS01995 PF01848 Hok/gef family AM340_RS02000 PF01556 DnaJ C terminal domain AM340_RS02000 PF00226 DnaJ domain AM340_RS02000 PF00684 DnaJ central domain AM340_RS02005 PF00012 Hsp70 protein AM340_RS02010 PF10807 Protein of unknown function (DUF2541) AM340_RS02015 PF13099 Domain of unknown function (DUF3944) AM340_RS02015 PF03981 Ubiquinol-cytochrome C chaperone AM340_RS02020 PF01184 GPR1/FUN34/yaaH family AM340_RS02025 PF00994 Probable molybdopterin binding domain AM340_RS02030 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM340_RS02035 PF01235 Sodium:alanine symporter family AM340_RS02040 PF03883 Peroxide stress protein YaaA AM340_RS02045 PF10697 Protein of unknown function (DUF2502) AM340_RS02050 PF14821 Threonine synthase N terminus AM340_RS02050 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS02055 PF00288 GHMP kinases N terminal domain AM340_RS02055 PF08544 GHMP kinases C terminal AM340_RS02060 PF01842 ACT domain AM340_RS02060 PF03447 Homoserine dehydrogenase, NAD binding domain AM340_RS02060 PF00742 Homoserine dehydrogenase AM340_RS02060 PF00696 Amino acid kinase family AM340_RS02060 PF13840 ACT domain AM340_RS02065 PF08254 Threonine leader peptide AM340_RS02070 PF00588 SpoU rRNA Methylase family AM340_RS02080 PF00486 Transcriptional regulatory protein, C terminal AM340_RS02080 PF00072 Response regulator receiver domain AM340_RS02085 PF06123 Inner membrane protein CreD AM340_RS02090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS02090 PF00672 HAMP domain AM340_RS02090 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS02095 PF00486 Transcriptional regulatory protein, C terminal AM340_RS02095 PF00072 Response regulator receiver domain AM340_RS02100 PF05981 CreA protein AM340_RS02105 PF06445 GyrI-like small molecule binding domain AM340_RS02105 PF12833 Helix-turn-helix domain AM340_RS02110 PF00300 Histidine phosphatase superfamily (branch 1) AM340_RS02115 PF01931 Protein of unknown function DUF84 AM340_RS02120 PF01371 Trp repressor protein AM340_RS02125 PF01464 Transglycosylase SLT domain AM340_RS02125 PF14718 Soluble lytic murein transglycosylase L domain AM340_RS02130 PF12848 ABC transporter AM340_RS02130 PF00005 ABC transporter AM340_RS02140 PF01381 Helix-turn-helix AM340_RS02140 PF13521 AAA domain AM340_RS02145 PF18073 Rubredoxin metal binding domain AM340_RS02150 PF18429 Domain of unknown function (DUF5609) AM340_RS02155 PF10144 Bacterial virulence factor haemolysin AM340_RS02160 PF10437 Bacterial lipoate protein ligase C-terminus AM340_RS02160 PF03099 Biotin/lipoate A/B protein ligase family AM340_RS02170 PF01048 Phosphorylase superfamily AM340_RS02175 PF01676 Metalloenzyme superfamily AM340_RS02180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM340_RS02180 PF00591 Glycosyl transferase family, a/b domain AM340_RS02180 PF02885 Glycosyl transferase family, helical bundle domain AM340_RS02185 PF01791 DeoC/LacD family aldolase AM340_RS02195 PF04055 Radical SAM superfamily AM340_RS02200 PF01026 TatD related DNase AM340_RS02205 PF01734 Patatin-like phospholipase AM340_RS02210 PF07043 Protein of unknown function (DUF1328) AM340_RS02215 PF04972 BON domain AM340_RS02220 PF00009 Elongation factor Tu GTP binding domain AM340_RS02220 PF03144 Elongation factor Tu domain 2 AM340_RS02220 PF16658 Class II release factor RF3, C-terminal domain AM340_RS02225 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS02230 PF00583 Acetyltransferase (GNAT) family AM340_RS02235 PF03603 DNA polymerase III psi subunit AM340_RS02240 PF05175 Methyltransferase small domain AM340_RS02240 PF08468 Methyltransferase small domain N-terminal AM340_RS02260 PF07256 Protein of unknown function (DUF1435) AM340_RS02265 PF11575 FhuF 2Fe-2S C-terminal domain AM340_RS02265 PF06276 Ferric iron reductase FhuF-like transporter AM340_RS02270 PF00196 Bacterial regulatory proteins, luxR family AM340_RS02275 PF00196 Bacterial regulatory proteins, luxR family AM340_RS02280 PF06738 Putative threonine/serine exporter AM340_RS02285 PF12821 Threonine/Serine exporter, ThrE AM340_RS02290 PF17948 DnaT DNA-binding domain AM340_RS02295 PF01695 IstB-like ATP binding protein AM340_RS02300 PF10696 Protein of unknown function (DUF2501) AM340_RS02305 PF00884 Sulfatase AM340_RS02315 PF07729 FCD domain AM340_RS02315 PF00392 Bacterial regulatory proteins, gntR family AM340_RS02320 PF00999 Sodium/hydrogen exchanger family AM340_RS02325 PF03480 Bacterial extracellular solute-binding protein, family 7 AM340_RS02335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM340_RS02340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM340_RS02340 PF02203 Tar ligand binding domain homologue AM340_RS02340 PF00672 HAMP domain AM340_RS02350 PF13722 5TM C-terminal transporter carbon starvation CstA AM340_RS02350 PF02554 Carbon starvation protein CstA AM340_RS02355 PF04328 Selenoprotein, putative AM340_RS02360 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM340_RS02360 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM340_RS02375 PF08463 EcoEI R protein C-terminal AM340_RS02375 PF00271 Helicase conserved C-terminal domain AM340_RS02375 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AM340_RS02375 PF04851 Type III restriction enzyme, res subunit AM340_RS02380 PF12161 HsdM N-terminal domain AM340_RS02380 PF02384 N-6 DNA Methylase AM340_RS02385 PF01420 Type I restriction modification DNA specificity domain AM340_RS02390 PF08845 Toxin SymE, type I toxin-antitoxin system AM340_RS02405 PF06568 Domain of unknown function (DUF1127) AM340_RS02410 PF04754 Putative transposase, YhgA-like AM340_RS02415 PF04286 Protein of unknown function (DUF445) AM340_RS02420 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AM340_RS02425 PF01869 BadF/BadG/BcrA/BcrD ATPase family AM340_RS02430 PF11823 Protein of unknown function (DUF3343) AM340_RS02435 PF06977 SdiA-regulated AM340_RS02450 PF07670 Nucleoside recognition AM340_RS02455 PF07670 Nucleoside recognition AM340_RS02460 PF01979 Amidohydrolase family AM340_RS02465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS02465 PF03466 LysR substrate binding domain AM340_RS02470 PF04965 Gene 25-like lysozyme AM340_RS02480 PF10887 Protein of unknown function (DUF2686) AM340_RS02485 PF07729 FCD domain AM340_RS02485 PF00392 Bacterial regulatory proteins, gntR family AM340_RS02495 PF01232 Mannitol dehydrogenase Rossmann domain AM340_RS02495 PF08125 Mannitol dehydrogenase C-terminal domain AM340_RS02500 PF03786 D-mannonate dehydratase (UxuA) AM340_RS02510 PF02447 GntP family permease AM340_RS02520 PF00419 Fimbrial protein AM340_RS02520 PF09160 FimH, mannose binding AM340_RS02530 PF00419 Fimbrial protein AM340_RS02540 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS02540 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS02545 PF00419 Fimbrial protein AM340_RS02550 PF00419 Fimbrial protein AM340_RS02560 PF00589 Phage integrase family AM340_RS02565 PF00589 Phage integrase family AM340_RS02580 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM340_RS02590 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase AM340_RS02660 PF00069 Protein kinase domain AM340_RS02660 PF03793 PASTA domain AM340_RS02670 PF01695 IstB-like ATP binding protein AM340_RS02680 PF02028 BCCT, betaine/carnitine/choline family transporter AM340_RS02690 PF03279 Bacterial lipid A biosynthesis acyltransferase AM340_RS02695 PF04393 Protein of unknown function (DUF535) AM340_RS02700 PF00534 Glycosyl transferases group 1 AM340_RS02700 PF13439 Glycosyltransferase Family 4 AM340_RS02705 PF01522 Polysaccharide deacetylase AM340_RS02720 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS02735 PF00005 ABC transporter AM340_RS02740 PF01032 FecCD transport family AM340_RS02745 PF01032 FecCD transport family AM340_RS02750 PF01497 Periplasmic binding protein AM340_RS02755 PF07715 TonB-dependent Receptor Plug Domain AM340_RS02755 PF07660 Secretin and TonB N terminus short domain AM340_RS02755 PF00593 TonB dependent receptor AM340_RS02760 PF16220 Domain of unknown function (DUF4880) AM340_RS02760 PF04773 FecR protein AM340_RS02765 PF04542 Sigma-70 region 2 AM340_RS02765 PF08281 Sigma-70, region 4 AM340_RS02835 PF16747 Surface-adhesin protein E AM340_RS02845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM340_RS02845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM340_RS02850 PF07690 Major Facilitator Superfamily AM340_RS02880 PF00589 Phage integrase family AM340_RS02880 PF13356 Arm DNA-binding domain AM340_RS02895 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS02895 PF00107 Zinc-binding dehydrogenase AM340_RS02900 PF01202 Shikimate kinase AM340_RS02905 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS02905 PF00107 Zinc-binding dehydrogenase AM340_RS02910 PF00106 short chain dehydrogenase AM340_RS02915 PF02447 GntP family permease AM340_RS02920 PF00356 Bacterial regulatory proteins, lacI family AM340_RS02925 PF05872 Bacterial protein of unknown function (DUF853) AM340_RS02930 PF03739 Lipopolysaccharide export system permease LptF/LptG AM340_RS02935 PF03739 Lipopolysaccharide export system permease LptF/LptG AM340_RS02940 PF02789 Cytosol aminopeptidase family, N-terminal domain AM340_RS02940 PF00883 Cytosol aminopeptidase family, catalytic domain AM340_RS02945 PF04364 DNA polymerase III chi subunit, HolC AM340_RS02950 PF00133 tRNA synthetases class I (I, L, M and V) AM340_RS02950 PF10458 Valyl tRNA synthetase tRNA binding arm AM340_RS02950 PF08264 Anticodon-binding domain of tRNA AM340_RS02955 PF05987 Bacterial protein of unknown function (DUF898) AM340_RS02960 PF00583 Acetyltransferase (GNAT) family AM340_RS02965 PF06877 Regulator of ribonuclease activity B AM340_RS02970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM340_RS02970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM340_RS02975 PF04074 YhcH/YjgK/YiaL AM340_RS02985 PF00696 Amino acid kinase family AM340_RS02990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM340_RS02990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM340_RS02995 PF03606 C4-dicarboxylate anaerobic carrier AM340_RS03000 PF01316 Arginine repressor, DNA binding domain AM340_RS03000 PF02863 Arginine repressor, C-terminal domain AM340_RS03005 PF08052 PyrBI operon leader peptide AM340_RS03010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM340_RS03010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM340_RS03015 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AM340_RS03015 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AM340_RS03020 PF01042 Endoribonuclease L-PSP AM340_RS03025 PF00689 Cation transporting ATPase, C-terminus AM340_RS03025 PF00690 Cation transporter/ATPase, N-terminus AM340_RS03030 PF17059 MgtA leader peptide AM340_RS03035 PF00356 Bacterial regulatory proteins, lacI family AM340_RS03040 PF00367 phosphotransferase system, EIIB AM340_RS03040 PF02378 Phosphotransferase system, EIIC AM340_RS03045 PF11941 Domain of unknown function (DUF3459) AM340_RS03045 PF00128 Alpha amylase, catalytic domain AM340_RS03050 PF03477 ATP cone domain AM340_RS03050 PF13597 Anaerobic ribonucleoside-triphosphate reductase AM340_RS03060 PF04221 RelB antitoxin AM340_RS03070 PF07361 Cytochrome b562 AM340_RS03075 PF01523 Putative modulator of DNA gyrase AM340_RS03080 PF04751 Protein of unknown function (DUF615) AM340_RS03085 PF01225 Mur ligase family, catalytic domain AM340_RS03085 PF02875 Mur ligase family, glutamate ligase domain AM340_RS03085 PF08245 Mur ligase middle domain AM340_RS03090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM340_RS03095 PF02653 Branched-chain amino acid transport system / permease component AM340_RS03100 PF02653 Branched-chain amino acid transport system / permease component AM340_RS03105 PF00005 ABC transporter AM340_RS03110 PF13407 Periplasmic binding protein domain AM340_RS03115 PF00719 Inorganic pyrophosphatase AM340_RS03120 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM340_RS03125 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM340_RS03130 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AM340_RS03135 PF04357 TamB, inner membrane protein subunit of TAM complex AM340_RS03140 PF17243 POTRA domain TamA domain 1 AM340_RS03140 PF07244 Surface antigen variable number repeat AM340_RS03140 PF01103 Surface antigen AM340_RS03145 PF01625 Peptide methionine sulfoxide reductase AM340_RS03150 PF01595 Cyclin M transmembrane N-terminal domain AM340_RS03150 PF03471 Transporter associated domain AM340_RS03150 PF00571 CBS domain AM340_RS03155 PF06526 Protein of unknown function (DUF1107) AM340_RS03160 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM340_RS03165 PF00459 Inositol monophosphatase family AM340_RS03170 PF00149 Calcineurin-like phosphoesterase AM340_RS03170 PF02872 5'-nucleotidase, C-terminal domain AM340_RS03175 PF01638 HxlR-like helix-turn-helix AM340_RS03180 PF05368 NmrA-like family AM340_RS03185 PF00892 EamA-like transporter family AM340_RS03190 PF01814 Hemerythrin HHE cation binding domain AM340_RS03190 PF04405 Domain of Unknown function (DUF542) AM340_RS03205 PF00324 Amino acid permease AM340_RS03210 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM340_RS03210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM340_RS03215 PF04225 Opacity-associated protein A LysM-like domain AM340_RS03215 PF08525 Opacity-associated protein A N-terminal motif AM340_RS03220 PF17938 Tetracyclin repressor-like, C-terminal domain AM340_RS03235 PF00378 Enoyl-CoA hydratase/isomerase AM340_RS03240 PF01144 Coenzyme A transferase AM340_RS03245 PF02910 Fumarate reductase flavoprotein C-term AM340_RS03245 PF00890 FAD binding domain AM340_RS03250 PF07690 Major Facilitator Superfamily AM340_RS03260 PF10887 Protein of unknown function (DUF2686) AM340_RS03265 PF01281 Ribosomal protein L9, N-terminal domain AM340_RS03265 PF03948 Ribosomal protein L9, C-terminal domain AM340_RS03270 PF01084 Ribosomal protein S18 AM340_RS03275 PF00436 Single-strand binding protein family AM340_RS03280 PF01250 Ribosomal protein S6 AM340_RS03285 PF07338 Protein of unknown function (DUF1471) AM340_RS03290 PF00596 Class II Aldolase and Adducin N-terminal domain AM340_RS03295 PF01261 Xylose isomerase-like TIM barrel AM340_RS03300 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM340_RS03305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS03310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS03315 PF03611 PTS system sugar-specific permease component AM340_RS03325 PF08220 DeoR-like helix-turn-helix domain AM340_RS03325 PF00455 DeoR C terminal sensor domain AM340_RS03330 PF00326 Prolyl oligopeptidase family AM340_RS03335 PF07338 Protein of unknown function (DUF1471) AM340_RS03340 PF07338 Protein of unknown function (DUF1471) AM340_RS03345 PF18158 Adaptive response protein AidB N-terminal domain AM340_RS03345 PF02770 Acyl-CoA dehydrogenase, middle domain AM340_RS03345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM340_RS03350 PF03738 Glutathionylspermidine synthase preATP-grasp AM340_RS03355 PF06693 Protein of unknown function (DUF1190) AM340_RS03360 PF03994 Domain of Unknown Function (DUF350) AM340_RS03365 PF10679 Protein of unknown function (DUF2491) AM340_RS03370 PF04012 PspA/IM30 family AM340_RS03375 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) AM340_RS03385 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM340_RS03385 PF00588 SpoU rRNA Methylase family AM340_RS03395 PF08206 Ribonuclease B OB domain AM340_RS03395 PF17876 Cold shock domain AM340_RS03395 PF08461 Ribonuclease R winged-helix domain AM340_RS03395 PF00773 RNB domain AM340_RS03395 PF00575 S1 RNA binding domain AM340_RS03400 PF02082 Transcriptional regulator AM340_RS03405 PF00709 Adenylosuccinate synthetase AM340_RS03410 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AM340_RS03415 PF01145 SPFH domain / Band 7 family AM340_RS03420 PF01145 SPFH domain / Band 7 family AM340_RS03420 PF12221 Bacterial membrane protein N terminal AM340_RS03425 PF01926 50S ribosome-binding GTPase AM340_RS03425 PF13167 GTP-binding GTPase N-terminal AM340_RS03425 PF16360 GTP-binding GTPase Middle Region AM340_RS03430 PF17209 Hfq protein AM340_RS03440 PF08676 MutL C terminal dimerisation domain AM340_RS03440 PF01119 DNA mismatch repair protein, C-terminal domain AM340_RS03445 PF01520 N-acetylmuramoyl-L-alanine amidase AM340_RS03450 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM340_RS03455 PF01256 Carbohydrate kinase AM340_RS03455 PF03853 YjeF-related protein N-terminus AM340_RS03460 PF08331 Domain of unknown function (DUF1730) AM340_RS03485 PF00929 Exonuclease AM340_RS03490 PF03193 RsgA GTPase AM340_RS03495 PF02666 Phosphatidylserine decarboxylase AM340_RS03500 PF00924 Mechanosensitive ion channel AM340_RS03500 PF12795 Mechanosensitive ion channel porin domain AM340_RS03500 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM340_RS03505 PF13520 Amino acid permease AM340_RS03510 PF00152 tRNA synthetases class II (D, K and N) AM340_RS03515 PF00890 FAD binding domain AM340_RS03515 PF02910 Fumarate reductase flavoprotein C-term AM340_RS03520 PF13085 2Fe-2S iron-sulfur cluster binding domain AM340_RS03520 PF13183 4Fe-4S dicluster domain AM340_RS03525 PF02300 Fumarate reductase subunit C AM340_RS03530 PF02313 Fumarate reductase subunit D AM340_RS03535 PF00144 Beta-lactamase AM340_RS03540 PF08212 Lipocalin-like domain AM340_RS03545 PF00893 Small Multidrug Resistance protein AM340_RS03550 PF08085 Entericidin EcnA/B family AM340_RS03555 PF08085 Entericidin EcnA/B family AM340_RS03560 PF08207 Elongation factor P (EF-P) KOW-like domain AM340_RS03560 PF09285 Elongation factor P, C-terminal AM340_RS03560 PF01132 Elongation factor P (EF-P) OB domain AM340_RS03565 PF04055 Radical SAM superfamily AM340_RS03570 PF15922 YjeJ-like AM340_RS03575 PF13698 Domain of unknown function (DUF4156) AM340_RS03580 PF00118 TCP-1/cpn60 chaperonin family AM340_RS03585 PF00166 Chaperonin 10 Kd subunit AM340_RS03590 PF13520 Amino acid permease AM340_RS03595 PF04186 FxsA cytoplasmic membrane protein AM340_RS03600 PF00206 Lyase AM340_RS03600 PF10415 Fumarase C C-terminus AM340_RS03605 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM340_RS03610 PF03091 CutA1 divalent ion tolerance protein AM340_RS03615 PF02683 Cytochrome C biogenesis protein transmembrane region AM340_RS03615 PF11412 Disulphide bond corrector protein DsbC AM340_RS03630 PF00589 Phage integrase family AM340_RS03630 PF13356 Arm DNA-binding domain AM340_RS03640 PF13091 PLD-like domain AM340_RS03640 PF13087 AAA domain AM340_RS03645 PF00884 Sulfatase AM340_RS03650 PF13505 Outer membrane protein beta-barrel domain AM340_RS03660 PF03628 PapG chaperone-binding domain AM340_RS03660 PF03627 PapG carbohydrate binding domain AM340_RS03665 PF00419 Fimbrial protein AM340_RS03670 PF00419 Fimbrial protein AM340_RS03675 PF00419 Fimbrial protein AM340_RS03680 PF14855 Pilus-assembly fibrillin subunit, chaperone AM340_RS03685 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS03685 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS03690 PF00577 Outer membrane usher protein AM340_RS03690 PF13954 PapC N-terminal domain AM340_RS03690 PF13953 PapC C-terminal domain AM340_RS03700 PF00419 Fimbrial protein AM340_RS03705 PF03333 Adhesin biosynthesis transcription regulatory protein AM340_RS03715 PF04703 FaeA-like protein AM340_RS03745 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS03755 PF00196 Bacterial regulatory proteins, luxR family AM340_RS03755 PF00563 EAL domain AM340_RS03765 PF18500 CadC C-terminal domain 1 AM340_RS03765 PF00486 Transcriptional regulatory protein, C terminal AM340_RS03775 PF13520 Amino acid permease AM340_RS03780 PF01276 Orn/Lys/Arg decarboxylase, major domain AM340_RS03780 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM340_RS03780 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM340_RS03790 PF01336 OB-fold nucleic acid binding domain AM340_RS03790 PF00152 tRNA synthetases class II (D, K and N) AM340_RS03795 PF10753 Toxin GhoT_OrtT AM340_RS03800 PF11080 Endoribonuclease GhoS AM340_RS03805 PF14542 GCN5-related N-acetyl-transferase AM340_RS03810 PF06902 Divergent 4Fe-4S mono-cluster AM340_RS03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS03815 PF00989 PAS fold AM340_RS03815 PF17203 Single cache domain 3 AM340_RS03815 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM340_RS03820 PF00072 Response regulator receiver domain AM340_RS03830 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM340_RS03835 PF05681 Fumarate hydratase (Fumerase) AM340_RS03835 PF05683 Fumarase C-terminus AM340_RS03840 PF09997 Predicted membrane protein (DUF2238) AM340_RS03855 PF02056 Family 4 glycosyl hydrolase AM340_RS03855 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM340_RS03860 PF12833 Helix-turn-helix domain AM340_RS03865 PF01276 Orn/Lys/Arg decarboxylase, major domain AM340_RS03865 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM340_RS03865 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM340_RS03870 PF12833 Helix-turn-helix domain AM340_RS03875 PF13520 Amino acid permease AM340_RS03880 PF00884 Sulfatase AM340_RS03880 PF08019 Phosphoethanolamine transferase EptA/EptB AM340_RS03885 PF00072 Response regulator receiver domain AM340_RS03885 PF00486 Transcriptional regulatory protein, C terminal AM340_RS03890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS03890 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS03900 PF08946 Osmosensory transporter coiled coil AM340_RS03900 PF00083 Sugar (and other) transporter AM340_RS03905 PF13990 YjcZ-like protein AM340_RS03910 PF00350 Dynamin family AM340_RS03920 PF08274 PhnA Zinc-Ribbon AM340_RS03920 PF03831 PhnA domain AM340_RS03930 PF00005 ABC transporter AM340_RS03940 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS03945 PF07702 UTRA domain AM340_RS03945 PF00392 Bacterial regulatory proteins, gntR family AM340_RS03950 PF06754 Phosphonate metabolism protein PhnG AM340_RS03955 PF05845 Bacterial phosphonate metabolism protein (PhnH) AM340_RS03960 PF05861 Bacterial phosphonate metabolism protein (PhnI) AM340_RS03965 PF06007 Phosphonate metabolism protein PhnJ AM340_RS03970 PF00005 ABC transporter AM340_RS03975 PF00005 ABC transporter AM340_RS03980 PF07969 Amidohydrolase family AM340_RS03990 PF00583 Acetyltransferase (GNAT) family AM340_RS03995 PF12706 Beta-lactamase superfamily domain AM340_RS04005 PF02502 Ribose/Galactose Isomerase AM340_RS04015 PF01418 Helix-turn-helix domain, rpiR family AM340_RS04015 PF01380 SIS domain AM340_RS04020 PF13407 Periplasmic binding protein domain AM340_RS04025 PF00005 ABC transporter AM340_RS04030 PF02653 Branched-chain amino acid transport system / permease component AM340_RS04035 PF00834 Ribulose-phosphate 3 epimerase family AM340_RS04045 PF00753 Metallo-beta-lactamase superfamily AM340_RS04045 PF14863 Alkyl sulfatase dimerisation AM340_RS04045 PF14864 Alkyl sulfatase C-terminal AM340_RS04050 PF17090 Uncharacterised protein family AM340_RS04055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS04055 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS04060 PF04632 Fusaric acid resistance protein family AM340_RS04065 PF02321 Outer membrane efflux protein AM340_RS04075 PF08238 Sel1 repeat AM340_RS04080 PF00375 Sodium:dicarboxylate symporter family AM340_RS04095 PF03918 Cytochrome C biogenesis protein AM340_RS04100 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM340_RS04100 PF01578 Cytochrome C assembly protein AM340_RS04105 PF03916 Polysulphide reductase, NrfD AM340_RS04110 PF13247 4Fe-4S dicluster domain AM340_RS04110 PF00037 4Fe-4S binding domain AM340_RS04115 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AM340_RS04115 PF13435 Cytochrome c554 and c-prime AM340_RS04120 PF02335 Cytochrome c552 AM340_RS04130 PF00501 AMP-binding enzyme AM340_RS04130 PF13193 AMP-binding enzyme C-terminal domain AM340_RS04130 PF16177 Acetyl-coenzyme A synthetase N-terminus AM340_RS04135 PF04341 Protein of unknown function, DUF485 AM340_RS04140 PF00474 Sodium:solute symporter family AM340_RS04145 PF00999 Sodium/hydrogen exchanger family AM340_RS04150 PF00860 Permease family AM340_RS04155 PF09278 MerR, DNA binding AM340_RS04155 PF00376 MerR family regulatory protein AM340_RS04160 PF12833 Helix-turn-helix domain AM340_RS04165 PF12792 CSS motif domain associated with EAL AM340_RS04165 PF00563 EAL domain AM340_RS04175 PF15940 Family of unknown function AM340_RS04180 PF00436 Single-strand binding protein family AM340_RS04185 PF17755 UvrA DNA-binding domain AM340_RS04185 PF17760 UvrA interaction domain AM340_RS04185 PF00005 ABC transporter AM340_RS04190 PF04237 YjbR AM340_RS04195 PF01894 Uncharacterised protein family UPF0047 AM340_RS04200 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM340_RS04215 PF00155 Aminotransferase class I and II AM340_RS04220 PF00842 Alanine racemase, C-terminal domain AM340_RS04220 PF01168 Alanine racemase, N-terminal domain AM340_RS04225 PF03796 DnaB-like helicase C terminal domain AM340_RS04225 PF00772 DnaB-like helicase N terminal domain AM340_RS04230 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS04230 PF00107 Zinc-binding dehydrogenase AM340_RS04235 PF09583 Phage shock protein G (Phageshock_PspG) AM340_RS04240 PF01207 Dihydrouridine synthase (Dus) AM340_RS04245 PF10897 Protein of unknown function (DUF2713) AM340_RS04250 PF01475 Ferric uptake regulator family AM340_RS04255 PF05532 CsbD-like AM340_RS04260 PF01554 MatE AM340_RS04265 PF01726 LexA DNA binding domain AM340_RS04265 PF00717 Peptidase S24-like AM340_RS04270 PF01219 Prokaryotic diacylglycerol kinase AM340_RS04275 PF01553 Acyltransferase AM340_RS04280 PF01040 UbiA prenyltransferase family AM340_RS04285 PF04345 Chorismate lyase AM340_RS04290 PF13981 SopA-like central domain AM340_RS04290 PF13599 Pentapeptide repeats (9 copies) AM340_RS04295 PF07148 Maltose operon periplasmic protein precursor (MalM) AM340_RS04300 PF02264 LamB porin AM340_RS04305 PF17912 MalK OB fold domain AM340_RS04305 PF00005 ABC transporter AM340_RS04310 PF01547 Bacterial extracellular solute-binding protein AM340_RS04315 PF14785 Maltose transport system permease protein MalF P2 domain AM340_RS04315 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS04320 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS04325 PF06146 Phosphate-starvation-inducible E AM340_RS04330 PF17089 Uncharacterised protein family AM340_RS04335 PF06082 Exopolysaccharide biosynthesis protein YbjH AM340_RS04340 PF06251 Capsule biosynthesis GfcC AM340_RS04345 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AM340_RS04350 PF11106 Exopolysaccharide production protein YjbE AM340_RS04355 PF00342 Phosphoglucose isomerase AM340_RS04365 PF01842 ACT domain AM340_RS04365 PF00696 Amino acid kinase family AM340_RS04370 PF08765 Mor transcription activator family AM340_RS04385 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM340_RS04385 PF01610 Transposase AM340_RS04385 PF13542 Helix-turn-helix domain of transposase family ISL3 AM340_RS04395 PF01464 Transglycosylase SLT domain AM340_RS04395 PF14718 Soluble lytic murein transglycosylase L domain AM340_RS04475 PF07484 Phage Tail Collar Domain AM340_RS04475 PF03335 Phage tail fibre repeat AM340_RS04490 PF10127 RNA repair pathway DNA polymerase beta family AM340_RS04500 PF11656 YjbD family (DUF3811) AM340_RS04505 PF01479 S4 domain AM340_RS04505 PF00849 RNA pseudouridylate synthase AM340_RS04510 PF04198 Putative sugar-binding domain AM340_RS04510 PF13936 Helix-turn-helix domain AM340_RS04520 PF03610 PTS system fructose IIA component AM340_RS04525 PF03830 PTS system sorbose subfamily IIB component AM340_RS04530 PF03609 PTS system sorbose-specific iic component AM340_RS04535 PF03613 PTS system mannose/fructose/sorbose family IID component AM340_RS04540 PF00107 Zinc-binding dehydrogenase AM340_RS04540 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS04545 PF08501 Shikimate dehydrogenase substrate binding domain AM340_RS04550 PF03575 Peptidase family S51 AM340_RS04555 PF02690 Na+/Pi-cotransporter AM340_RS04570 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM340_RS04570 PF02310 B12 binding domain AM340_RS04570 PF02574 Homocysteine S-methyltransferase AM340_RS04570 PF02607 B12 binding domain AM340_RS04570 PF00809 Pterin binding enzyme AM340_RS04575 PF01614 Bacterial transcriptional regulator AM340_RS04575 PF09339 IclR helix-turn-helix domain AM340_RS04580 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM340_RS04585 PF00463 Isocitrate lyase family AM340_RS04590 PF01274 Malate synthase AM340_RS04595 PF04204 Homoserine O-succinyltransferase AM340_RS04600 PF13673 Acetyltransferase (GNAT) domain AM340_RS04630 PF02142 MGS-like domain AM340_RS04630 PF01808 AICARFT/IMPCHase bienzyme AM340_RS04635 PF02843 Phosphoribosylglycinamide synthetase, C domain AM340_RS04635 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM340_RS04635 PF02844 Phosphoribosylglycinamide synthetase, N domain AM340_RS04640 PF00072 Response regulator receiver domain AM340_RS04640 PF02954 Bacterial regulatory protein, Fis family AM340_RS04640 PF00158 Sigma-54 interaction domain AM340_RS04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS04645 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS04650 PF13801 Heavy-metal resistance AM340_RS04655 PF07356 Protein of unknown function (DUF1481) AM340_RS04660 PF00216 Bacterial DNA-binding protein AM340_RS04665 PF04222 Protein of unknown function (DUF416) AM340_RS04670 PF04493 Endonuclease V AM340_RS04675 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM340_RS04680 PF09297 NADH pyrophosphatase zinc ribbon domain AM340_RS04680 PF00293 NUDIX domain AM340_RS04685 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AM340_RS04690 PF13667 ThiC-associated domain AM340_RS04690 PF01964 Radical SAM ThiC family AM340_RS04695 PF02581 Thiamine monophosphate synthase AM340_RS04700 PF00899 ThiF family AM340_RS04705 PF02597 ThiS family AM340_RS04710 PF05690 Thiazole biosynthesis protein ThiG AM340_RS04715 PF06968 Biotin and Thiamin Synthesis associated domain AM340_RS04715 PF04055 Radical SAM superfamily AM340_RS04735 PF00294 pfkB family carbohydrate kinase AM340_RS04740 PF04998 RNA polymerase Rpb1, domain 5 AM340_RS04740 PF05000 RNA polymerase Rpb1, domain 4 AM340_RS04740 PF04983 RNA polymerase Rpb1, domain 3 AM340_RS04740 PF00623 RNA polymerase Rpb1, domain 2 AM340_RS04740 PF04997 RNA polymerase Rpb1, domain 1 AM340_RS04745 PF04561 RNA polymerase Rpb2, domain 2 AM340_RS04745 PF04565 RNA polymerase Rpb2, domain 3 AM340_RS04745 PF00562 RNA polymerase Rpb2, domain 6 AM340_RS04745 PF04560 RNA polymerase Rpb2, domain 7 AM340_RS04745 PF04563 RNA polymerase beta subunit AM340_RS04745 PF10385 RNA polymerase beta subunit external 1 domain AM340_RS04750 PF00542 Ribosomal protein L7/L12 C-terminal domain AM340_RS04750 PF16320 Ribosomal protein L7/L12 dimerisation domain AM340_RS04755 PF00466 Ribosomal protein L10 AM340_RS04765 PF00687 Ribosomal protein L1p/L10e family AM340_RS04770 PF00298 Ribosomal protein L11, RNA binding domain AM340_RS04770 PF03946 Ribosomal protein L11, N-terminal domain AM340_RS04775 PF00467 KOW motif AM340_RS04775 PF02357 Transcription termination factor nusG AM340_RS04780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM340_RS04785 PF03144 Elongation factor Tu domain 2 AM340_RS04785 PF03143 Elongation factor Tu C-terminal domain AM340_RS04785 PF00009 Elongation factor Tu GTP binding domain AM340_RS04815 PF00485 Phosphoribulokinase / Uridine kinase family AM340_RS04820 PF08279 HTH domain AM340_RS04820 PF03099 Biotin/lipoate A/B protein ligase family AM340_RS04820 PF02237 Biotin protein ligase C terminal domain AM340_RS04825 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM340_RS04825 PF01565 FAD binding domain AM340_RS04855 PF01177 Asp/Glu/Hydantoin racemase AM340_RS04860 PF00593 TonB dependent receptor AM340_RS04860 PF07715 TonB-dependent Receptor Plug Domain AM340_RS04865 PF05958 tRNA (Uracil-5-)-methyltransferase AM340_RS04870 PF07226 Protein of unknown function (DUF1422) AM340_RS04875 PF00440 Bacterial regulatory proteins, tetR family AM340_RS04880 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS04880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM340_RS04885 PF03466 LysR substrate binding domain AM340_RS04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS04890 PF14698 Argininosuccinate lyase C-terminal AM340_RS04890 PF00206 Lyase AM340_RS04895 PF00696 Amino acid kinase family AM340_RS04900 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM340_RS04900 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM340_RS04905 PF01546 Peptidase family M20/M25/M40 AM340_RS04905 PF07687 Peptidase dimerisation domain AM340_RS04910 PF00311 Phosphoenolpyruvate carboxylase AM340_RS04915 PF00884 Sulfatase AM340_RS04920 PF12833 Helix-turn-helix domain AM340_RS04925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS04930 PF04055 Radical SAM superfamily AM340_RS04935 PF02901 Pyruvate formate lyase-like AM340_RS04935 PF01228 Glycine radical AM340_RS04940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS04950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS04950 PF00391 PEP-utilising enzyme, mobile domain AM340_RS04950 PF00381 PTS HPr component phosphorylation site AM340_RS04950 PF02896 PEP-utilising enzyme, TIM barrel domain AM340_RS04950 PF05524 PEP-utilising enzyme, N-terminal AM340_RS04955 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM340_RS04960 PF00465 Iron-containing alcohol dehydrogenase AM340_RS04965 PF06940 Domain of unknown function (DUF1287) AM340_RS04970 PF00892 EamA-like transporter family AM340_RS04975 PF00141 Peroxidase AM340_RS04980 PF02219 Methylenetetrahydrofolate reductase AM340_RS04985 PF02872 5'-nucleotidase, C-terminal domain AM340_RS04985 PF00149 Calcineurin-like phosphoesterase AM340_RS04995 PF00149 Calcineurin-like phosphoesterase AM340_RS04995 PF02872 5'-nucleotidase, C-terminal domain AM340_RS05000 PF02872 5'-nucleotidase, C-terminal domain AM340_RS05000 PF00149 Calcineurin-like phosphoesterase AM340_RS05005 PF03502 Nucleoside-specific channel-forming protein, Tsx AM340_RS05010 PF03447 Homoserine dehydrogenase, NAD binding domain AM340_RS05010 PF00696 Amino acid kinase family AM340_RS05010 PF00742 Homoserine dehydrogenase AM340_RS05015 PF01053 Cys/Met metabolism PLP-dependent enzyme AM340_RS05020 PF01340 Met Apo-repressor, MetJ AM340_RS05025 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM340_RS05030 PF01197 Ribosomal protein L31 AM340_RS05035 PF00270 DEAD/DEAH box helicase AM340_RS05035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM340_RS05035 PF18074 Primosomal protein N C-terminal domain AM340_RS05035 PF17764 3′ DNA-binding domain (3′BD) AM340_RS05035 PF00271 Helicase conserved C-terminal domain AM340_RS05040 PF00356 Bacterial regulatory proteins, lacI family AM340_RS05045 PF05036 Sporulation related domain AM340_RS05050 PF00227 Proteasome subunit AM340_RS05055 PF00004 ATPase family associated with various cellular activities (AAA) AM340_RS05055 PF07724 AAA domain (Cdc48 subfamily) AM340_RS05055 PF10431 C-terminal, D2-small domain, of ClpB protein AM340_RS05060 PF01040 UbiA prenyltransferase family AM340_RS05065 PF03737 Aldolase/RraA AM340_RS05080 PF06005 Cell division protein ZapB AM340_RS05085 PF00230 Major intrinsic protein AM340_RS05090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM340_RS05090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM340_RS05095 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM340_RS05100 PF00970 Oxidoreductase FAD-binding domain AM340_RS05100 PF00175 Oxidoreductase NAD-binding domain AM340_RS05105 PF00582 Universal stress protein family AM340_RS05110 PF04175 Protein of unknown function (DUF406) AM340_RS05115 PF05656 Protein of unknown function (DUF805) AM340_RS05120 PF07305 Protein of unknown function (DUF1454) AM340_RS05125 PF00121 Triosephosphate isomerase AM340_RS05130 PF02611 CDP-diacylglycerol pyrophosphatase AM340_RS05140 PF00365 Phosphofructokinase AM340_RS05145 PF01545 Cation efflux family AM340_RS05145 PF16916 Dimerisation domain of Zinc Transporter AM340_RS05150 PF07813 LTXXQ motif family protein AM340_RS05155 PF00486 Transcriptional regulatory protein, C terminal AM340_RS05155 PF00072 Response regulator receiver domain AM340_RS05160 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS05160 PF16527 Two-component sensor protein CpxA, periplasmic domain AM340_RS05160 PF00672 HAMP domain AM340_RS05165 PF03475 3-alpha domain AM340_RS05165 PF03473 MOSC domain AM340_RS05170 PF03812 2-keto-3-deoxygluconate permease AM340_RS05175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM340_RS05175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM340_RS05180 PF06379 L-rhamnose-proton symport protein (RhaT) AM340_RS05185 PF02311 AraC-like ligand binding domain AM340_RS05185 PF12833 Helix-turn-helix domain AM340_RS05190 PF12833 Helix-turn-helix domain AM340_RS05190 PF02311 AraC-like ligand binding domain AM340_RS05195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM340_RS05195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM340_RS05200 PF06134 L-rhamnose isomerase (RhaA) AM340_RS05205 PF00596 Class II Aldolase and Adducin N-terminal domain AM340_RS05210 PF05336 L-rhamnose mutarotase AM340_RS05220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS05225 PF02378 Phosphotransferase system, EIIC AM340_RS05225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS05230 PF05343 M42 glutamyl aminopeptidase AM340_RS05235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS05235 PF08279 HTH domain AM340_RS05240 PF12889 Protein of unknown function (DUF3829) AM340_RS05245 PF02634 FdhD/NarQ family AM340_RS05250 PF01568 Molydopterin dinucleotide binding domain AM340_RS05250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM340_RS05250 PF00384 Molybdopterin oxidoreductase AM340_RS05255 PF01568 Molydopterin dinucleotide binding domain AM340_RS05255 PF00384 Molybdopterin oxidoreductase AM340_RS05255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM340_RS05260 PF13247 4Fe-4S dicluster domain AM340_RS05260 PF09163 Formate dehydrogenase N, transmembrane AM340_RS05265 PF01292 Prokaryotic cytochrome b561 AM340_RS05270 PF04216 Protein involved in formate dehydrogenase formation AM340_RS05280 PF01402 Ribbon-helix-helix protein, copG family AM340_RS05300 PF00583 Acetyltransferase (GNAT) family AM340_RS05300 PF09500 Putative thioesterase (yiiD_Cterm) AM340_RS05305 PF02580 D-Tyr-tRNA(Tyr) deacylase AM340_RS05310 PF03631 Virulence factor BrkB AM340_RS05315 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS05320 PF00455 DeoR C terminal sensor domain AM340_RS05320 PF08220 DeoR-like helix-turn-helix domain AM340_RS05325 PF00294 pfkB family carbohydrate kinase AM340_RS05330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM340_RS05330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM340_RS05335 PF01791 DeoC/LacD family aldolase AM340_RS05345 PF01263 Aldose 1-epimerase AM340_RS05350 PF01055 Glycosyl hydrolases family 31 AM340_RS05365 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM340_RS05370 PF07690 Major Facilitator Superfamily AM340_RS05415 PF02522 Aminoglycoside 3-N-acetyltransferase AM340_RS05420 PF13610 DDE domain AM340_RS05435 PF13610 DDE domain AM340_RS05460 PF01636 Phosphotransferase enzyme family AM340_RS05470 PF13610 DDE domain AM340_RS05495 PF00809 Pterin binding enzyme AM340_RS05500 PF00893 Small Multidrug Resistance protein AM340_RS05505 PF13427 Domain of unknown function (DUF4111) AM340_RS05515 PF00186 Dihydrofolate reductase AM340_RS05520 PF00589 Phage integrase family AM340_RS05520 PF13495 Phage integrase, N-terminal SAM-like domain AM340_RS05525 PF11809 Domain of unknown function (DUF3330) AM340_RS05525 PF00563 EAL domain AM340_RS05530 PF02796 Helix-turn-helix domain of resolvase AM340_RS05530 PF00239 Resolvase, N terminal domain AM340_RS05535 PF13700 Domain of unknown function (DUF4158) AM340_RS05535 PF01526 Tn3 transposase DDE domain AM340_RS05545 PF00302 Chloramphenicol acetyltransferase AM340_RS05565 PF01261 Xylose isomerase-like TIM barrel AM340_RS05570 PF00392 Bacterial regulatory proteins, gntR family AM340_RS05570 PF07702 UTRA domain AM340_RS05575 PF01609 Transposase DDE domain AM340_RS05575 PF13006 Insertion element 4 transposase N-terminal AM340_RS05580 PF03144 Elongation factor Tu domain 2 AM340_RS05580 PF00009 Elongation factor Tu GTP binding domain AM340_RS05580 PF00679 Elongation factor G C-terminus AM340_RS05590 PF03951 Glutamine synthetase, beta-Grasp domain AM340_RS05590 PF00120 Glutamine synthetase, catalytic domain AM340_RS05595 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS05595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS05595 PF00989 PAS fold AM340_RS05600 PF02954 Bacterial regulatory protein, Fis family AM340_RS05600 PF00072 Response regulator receiver domain AM340_RS05600 PF00158 Sigma-54 interaction domain AM340_RS05610 PF06969 HemN C-terminal domain AM340_RS05610 PF04055 Radical SAM superfamily AM340_RS05615 PF04220 Der GTPase activator (YihI) AM340_RS05620 PF01926 50S ribosome-binding GTPase AM340_RS05625 PF00476 DNA polymerase family A AM340_RS05625 PF01367 5'-3' exonuclease, C-terminal SAM fold AM340_RS05625 PF01612 3'-5' exonuclease AM340_RS05625 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM340_RS05635 PF01553 Acyltransferase AM340_RS05640 PF06097 Bacterial protein of unknown function (DUF945) AM340_RS05645 PF01323 DSBA-like thioredoxin domain AM340_RS05650 PF01636 Phosphotransferase enzyme family AM340_RS05655 PF06288 Protein of unknown function (DUF1040) AM340_RS05660 PF12804 MobA-like NTP transferase domain AM340_RS05665 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM340_RS05695 PF12724 Flavodoxin domain AM340_RS05700 PF02386 Cation transport protein AM340_RS05705 PF09186 Domain of unknown function (DUF1949) AM340_RS05705 PF01205 Uncharacterized protein family UPF0029 AM340_RS05710 PF00557 Metallopeptidase family M24 AM340_RS05715 PF00378 Enoyl-CoA hydratase/isomerase AM340_RS05715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM340_RS05715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM340_RS05720 PF00108 Thiolase, N-terminal domain AM340_RS05720 PF02803 Thiolase, C-terminal domain AM340_RS05725 PF00970 Oxidoreductase FAD-binding domain AM340_RS05725 PF00175 Oxidoreductase NAD-binding domain AM340_RS05730 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM340_RS05735 PF02357 Transcription termination factor nusG AM340_RS05740 PF01026 TatD related DNase AM340_RS05745 PF00902 Sec-independent protein translocase protein (TatC) AM340_RS05755 PF02416 mttA/Hcf106 family AM340_RS05760 PF03109 ABC1 family AM340_RS05765 PF02036 SCP-2 sterol transfer family AM340_RS05770 PF01209 ubiE/COQ5 methyltransferase family AM340_RS05775 PF02646 RmuC family AM340_RS05780 PF09339 IclR helix-turn-helix domain AM340_RS05780 PF01614 Bacterial transcriptional regulator AM340_RS05785 PF05035 2-keto-3-deoxy-galactonokinase AM340_RS05795 PF03401 Tripartite tricarboxylate transporter family receptor AM340_RS05810 PF01048 Phosphorylase superfamily AM340_RS05815 PF01738 Dienelactone hydrolase family AM340_RS05840 PF01717 Cobalamin-independent synthase, Catalytic domain AM340_RS05840 PF08267 Cobalamin-independent synthase, N-terminal domain AM340_RS05845 PF03466 LysR substrate binding domain AM340_RS05845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS05850 PF00892 EamA-like transporter family AM340_RS05860 PF12146 Serine aminopeptidase, S33 AM340_RS05865 PF01810 LysE type translocator AM340_RS05870 PF01810 LysE type translocator AM340_RS05875 PF16124 RecQ zinc-binding AM340_RS05875 PF00570 HRDC domain AM340_RS05875 PF00271 Helicase conserved C-terminal domain AM340_RS05875 PF00270 DEAD/DEAH box helicase AM340_RS05875 PF09382 RQC domain AM340_RS05880 PF02253 Phospholipase A1 AM340_RS05885 PF03061 Thioesterase superfamily AM340_RS05890 PF00892 EamA-like transporter family AM340_RS05900 PF10947 Protein of unknown function (DUF2628) AM340_RS05905 PF01544 CorA-like Mg2+ transporter protein AM340_RS05920 PF01544 CorA-like Mg2+ transporter protein AM340_RS05925 PF09992 Phosphodiester glycosidase AM340_RS05930 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase AM340_RS05935 PF13361 UvrD-like helicase C-terminal domain AM340_RS05935 PF00580 UvrD/REP helicase N-terminal domain AM340_RS05940 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS05945 PF02899 Phage integrase, N-terminal SAM-like domain AM340_RS05945 PF00589 Phage integrase family AM340_RS05950 PF04340 Protein of unknown function, DUF484 AM340_RS05955 PF01678 Diaminopimelate epimerase AM340_RS05960 PF13627 Prokaryotic lipoprotein-attachment site AM340_RS05985 PF01491 Frataxin-like domain AM340_RS05990 PF12633 Adenylate cyclase NT domain AM340_RS05990 PF01295 Adenylate cyclase, class-I AM340_RS06000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM340_RS06000 PF03900 Porphobilinogen deaminase, C-terminal domain AM340_RS06005 PF02602 Uroporphyrinogen-III synthase HemD AM340_RS06010 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM340_RS06015 PF07719 Tetratricopeptide repeat AM340_RS06015 PF07219 HemY protein N-terminus AM340_RS06020 PF00884 Sulfatase AM340_RS06025 PF13186 Iron-sulfur cluster-binding domain AM340_RS06025 PF04055 Radical SAM superfamily AM340_RS06050 PF00324 Amino acid permease AM340_RS06055 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM340_RS06060 PF06899 WzyE protein, O-antigen assembly polymerase AM340_RS06065 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AM340_RS06070 PF01943 Polysaccharide biosynthesis protein AM340_RS06075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM340_RS06085 PF00483 Nucleotidyl transferase AM340_RS06090 PF16363 GDP-mannose 4,6 dehydratase AM340_RS06095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM340_RS06095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM340_RS06095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM340_RS06100 PF02350 UDP-N-acetylglucosamine 2-epimerase AM340_RS06105 PF02706 Chain length determinant protein AM340_RS06110 PF00953 Glycosyl transferase family 4 AM340_RS06120 PF07498 Rho termination factor, N-terminal domain AM340_RS06120 PF07497 Rho termination factor, RNA-binding domain AM340_RS06120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM340_RS06130 PF00085 Thioredoxin AM340_RS06135 PF00270 DEAD/DEAH box helicase AM340_RS06135 PF00271 Helicase conserved C-terminal domain AM340_RS06145 PF02541 Ppx/GppA phosphatase family AM340_RS06150 PF13361 UvrD-like helicase C-terminal domain AM340_RS06150 PF00580 UvrD/REP helicase N-terminal domain AM340_RS06155 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM340_RS06165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM340_RS06165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM340_RS06170 PF03466 LysR substrate binding domain AM340_RS06170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS06175 PF00585 C-terminal regulatory domain of Threonine dehydratase AM340_RS06175 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS06180 PF00920 Dehydratase family AM340_RS06185 PF01063 Amino-transferase class IV AM340_RS06195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM340_RS06195 PF00205 Thiamine pyrophosphate enzyme, central domain AM340_RS06195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM340_RS06205 PF08046 IlvGEDA operon leader peptide AM340_RS06225 PF04219 Protein of unknown function, DUF AM340_RS06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS06230 PF03466 LysR substrate binding domain AM340_RS06265 PF07729 FCD domain AM340_RS06265 PF00392 Bacterial regulatory proteins, gntR family AM340_RS06270 PF07690 Major Facilitator Superfamily AM340_RS06275 PF00356 Bacterial regulatory proteins, lacI family AM340_RS06280 PF00294 pfkB family carbohydrate kinase AM340_RS06285 PF13407 Periplasmic binding protein domain AM340_RS06290 PF02653 Branched-chain amino acid transport system / permease component AM340_RS06295 PF00005 ABC transporter AM340_RS06300 PF05025 RbsD / FucU transport protein family AM340_RS06305 PF02705 K+ potassium transporter AM340_RS06310 PF13006 Insertion element 4 transposase N-terminal AM340_RS06310 PF01609 Transposase DDE domain AM340_RS06315 PF12592 Protein of unknown function (DUF3763) AM340_RS06315 PF17868 AAA lid domain AM340_RS06315 PF07728 AAA domain (dynein-related subfamily) AM340_RS06320 PF05762 VWA domain containing CoxE-like protein AM340_RS06325 PF03590 Aspartate-ammonia ligase AM340_RS06330 PF01037 Lrp/AsnC ligand binding domain AM340_RS06335 PF00258 Flavodoxin AM340_RS06340 PF01134 Glucose inhibited division protein A AM340_RS06340 PF13932 GidA associated domain AM340_RS06345 PF02527 rRNA small subunit methyltransferase G AM340_RS06350 PF03899 ATP synthase I chain AM340_RS06355 PF00119 ATP synthase A chain AM340_RS06360 PF00137 ATP synthase subunit C AM340_RS06365 PF00430 ATP synthase B/B' CF(0) AM340_RS06370 PF00213 ATP synthase delta (OSCP) subunit AM340_RS06375 PF00306 ATP synthase alpha/beta chain, C terminal domain AM340_RS06375 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM340_RS06375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM340_RS06380 PF00231 ATP synthase AM340_RS06385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM340_RS06385 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM340_RS06390 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM340_RS06390 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM340_RS06395 PF12804 MobA-like NTP transferase domain AM340_RS06395 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS06395 PF14602 Hexapeptide repeat of succinyl-transferase AM340_RS06400 PF01380 SIS domain AM340_RS06405 PF00419 Fimbrial protein AM340_RS06410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS06410 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS06425 PF12849 PBP superfamily domain AM340_RS06430 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS06435 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS06440 PF00005 ABC transporter AM340_RS06445 PF01895 PhoU domain AM340_RS06480 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS06485 PF00860 Permease family AM340_RS06490 PF03358 NADPH-dependent FMN reductase AM340_RS06500 PF03466 LysR substrate binding domain AM340_RS06500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS06505 PF07690 Major Facilitator Superfamily AM340_RS06510 PF03222 Tryptophan/tyrosine permease family AM340_RS06515 PF01212 Beta-eliminating lyase AM340_RS06520 PF08053 Tryptophanase operon leader peptide AM340_RS06525 PF10396 GTP-binding protein TrmE N-terminus AM340_RS06525 PF12631 MnmE helical domain AM340_RS06525 PF01926 50S ribosome-binding GTPase AM340_RS06530 PF02096 60Kd inner membrane protein AM340_RS06530 PF14849 YidC periplasmic domain AM340_RS06535 PF01809 Putative membrane protein insertion efficiency factor AM340_RS06540 PF00825 Ribonuclease P AM340_RS06545 PF00468 Ribosomal protein L34 AM340_RS06555 PF08299 Bacterial dnaA protein helix-turn-helix AM340_RS06555 PF00308 Bacterial dnaA protein AM340_RS06555 PF11638 DnaA N-terminal domain AM340_RS06560 PF02768 DNA polymerase III beta subunit, C-terminal domain AM340_RS06560 PF02767 DNA polymerase III beta subunit, central domain AM340_RS06560 PF00712 DNA polymerase III beta subunit, N-terminal domain AM340_RS06565 PF02463 RecF/RecN/SMC N terminal domain AM340_RS06570 PF01751 Toprim domain AM340_RS06570 PF00204 DNA gyrase B AM340_RS06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS06570 PF00986 DNA gyrase B subunit, carboxyl terminus AM340_RS06570 PF18053 DNA gyrase B subunit insert domain AM340_RS06580 PF06078 Bacterial protein of unknown function (DUF937) AM340_RS06595 PF07729 FCD domain AM340_RS06595 PF00392 Bacterial regulatory proteins, gntR family AM340_RS06600 PF05035 2-keto-3-deoxy-galactonokinase AM340_RS06605 PF01081 KDPG and KHG aldolase AM340_RS06610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM340_RS06610 PF13378 Enolase C-terminal domain-like AM340_RS06615 PF07690 Major Facilitator Superfamily AM340_RS06620 PF01494 FAD binding domain AM340_RS06625 PF07676 WD40-like Beta Propeller Repeat AM340_RS06625 PF12566 Protein of unknown function (DUF3748) AM340_RS06630 PF07119 Protein of unknown function (DUF1375) AM340_RS06635 PF00011 Hsp20/alpha crystallin family AM340_RS06640 PF00011 Hsp20/alpha crystallin family AM340_RS06645 PF06826 Predicted Permease Membrane Region AM340_RS06645 PF02080 TrkA-C domain AM340_RS06650 PF07702 UTRA domain AM340_RS06650 PF00392 Bacterial regulatory proteins, gntR family AM340_RS06655 PF02378 Phosphotransferase system, EIIC AM340_RS06655 PF00367 phosphotransferase system, EIIB AM340_RS06660 PF02056 Family 4 glycosyl hydrolase AM340_RS06660 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM340_RS06665 PF02311 AraC-like ligand binding domain AM340_RS06665 PF12833 Helix-turn-helix domain AM340_RS06670 PF00474 Sodium:solute symporter family AM340_RS06675 PF16347 Domain of unknown function (DUF4976) AM340_RS06675 PF00884 Sulfatase AM340_RS06680 PF00884 Sulfatase AM340_RS06680 PF16347 Domain of unknown function (DUF4976) AM340_RS06685 PF02656 Domain of unknown function (DUF202) AM340_RS06690 PF02656 Domain of unknown function (DUF202) AM340_RS06700 PF07690 Major Facilitator Superfamily AM340_RS06705 PF13939 Toxin TisB, type I toxin-antitoxin system AM340_RS06720 PF08049 IlvB leader peptide AM340_RS06725 PF00205 Thiamine pyrophosphate enzyme, central domain AM340_RS06725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM340_RS06725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM340_RS06730 PF01842 ACT domain AM340_RS06745 PF00072 Response regulator receiver domain AM340_RS06745 PF00196 Bacterial regulatory proteins, luxR family AM340_RS06750 PF05231 MASE1 AM340_RS06750 PF07730 Histidine kinase AM340_RS06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS06755 PF07690 Major Facilitator Superfamily AM340_RS06760 PF07690 Major Facilitator Superfamily AM340_RS06765 PF13382 Adenine deaminase C-terminal domain AM340_RS06765 PF01979 Amidohydrolase family AM340_RS06770 PF00860 Permease family AM340_RS06775 PF06711 Protein of unknown function (DUF1198) AM340_RS06795 PF07690 Major Facilitator Superfamily AM340_RS06800 PF09134 Invasin, domain 3 AM340_RS06800 PF02369 Bacterial Ig-like domain (group 1) AM340_RS06800 PF11924 Inverse autotransporter, beta-domain AM340_RS06805 PF00486 Transcriptional regulatory protein, C terminal AM340_RS06810 PF06511 Type III secretion systems tip complex components AM340_RS06830 PF07720 Tetratricopeptide repeat AM340_RS06840 PF03180 NLPA lipoprotein AM340_RS06845 PF00892 EamA-like transporter family AM340_RS06850 PF07690 Major Facilitator Superfamily AM340_RS06880 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM340_RS06885 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM340_RS06890 PF06174 Protein of unknown function (DUF987) AM340_RS06895 PF04002 RadC-like JAB domain AM340_RS06900 PF03230 Antirestriction protein AM340_RS06905 PF06067 Domain of unknown function (DUF932) AM340_RS06910 PF06006 Bacterial protein of unknown function (DUF905) AM340_RS06920 PF13280 WYL domain AM340_RS06920 PF08220 DeoR-like helix-turn-helix domain AM340_RS06925 PF01926 50S ribosome-binding GTPase AM340_RS06960 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS06960 PF12804 MobA-like NTP transferase domain AM340_RS06960 PF14602 Hexapeptide repeat of succinyl-transferase AM340_RS06965 PF00294 pfkB family carbohydrate kinase AM340_RS06970 PF04227 Indigoidine synthase A like protein AM340_RS06975 PF07662 Na+ dependent nucleoside transporter C-terminus AM340_RS06975 PF01773 Na+ dependent nucleoside transporter N-terminus AM340_RS06980 PF00294 pfkB family carbohydrate kinase AM340_RS07000 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS07005 PF02447 GntP family permease AM340_RS07010 PF03466 LysR substrate binding domain AM340_RS07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS07020 PF00893 Small Multidrug Resistance protein AM340_RS07025 PF00893 Small Multidrug Resistance protein AM340_RS07035 PF06130 Phosphate propanoyltransferase AM340_RS07040 PF00936 BMC domain AM340_RS07045 PF04055 Radical SAM superfamily AM340_RS07045 PF13187 4Fe-4S dicluster domain AM340_RS07050 PF02901 Pyruvate formate lyase-like AM340_RS07050 PF01228 Glycine radical AM340_RS07055 PF00465 Iron-containing alcohol dehydrogenase AM340_RS07065 PF00171 Aldehyde dehydrogenase family AM340_RS07065 PF00465 Iron-containing alcohol dehydrogenase AM340_RS07070 PF00936 BMC domain AM340_RS07075 PF00936 BMC domain AM340_RS07080 PF00936 BMC domain AM340_RS07095 PF00072 Response regulator receiver domain AM340_RS07095 PF00486 Transcriptional regulatory protein, C terminal AM340_RS07110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS07130 PF00155 Aminotransferase class I and II AM340_RS07135 PF03553 Na+/H+ antiporter family AM340_RS07155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS07170 PF13505 Outer membrane protein beta-barrel domain AM340_RS07175 PF00884 Sulfatase AM340_RS07185 PF14659 Phage integrase, N-terminal SAM-like domain AM340_RS07185 PF13356 Arm DNA-binding domain AM340_RS07185 PF00589 Phage integrase family AM340_RS07200 PF01055 Glycosyl hydrolases family 31 AM340_RS07200 PF13802 Galactose mutarotase-like AM340_RS07205 PF08279 HTH domain AM340_RS07205 PF00874 PRD domain AM340_RS07205 PF05043 Mga helix-turn-helix domain AM340_RS07205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS07205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS07210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS07210 PF02378 Phosphotransferase system, EIIC AM340_RS07210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS07215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS07220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS07225 PF01116 Fructose-bisphosphate aldolase class-II AM340_RS07230 PF01116 Fructose-bisphosphate aldolase class-II AM340_RS07235 PF00480 ROK family AM340_RS07245 PF05170 AsmA family AM340_RS07250 PF00860 Permease family AM340_RS07255 PF03616 Sodium/glutamate symporter AM340_RS07260 PF00271 Helicase conserved C-terminal domain AM340_RS07260 PF00270 DEAD/DEAH box helicase AM340_RS07260 PF17191 RecG wedge domain AM340_RS07265 PF00588 SpoU rRNA Methylase family AM340_RS07265 PF12105 SpoU, rRNA methylase, C-terminal AM340_RS07270 PF04607 Region found in RelA / SpoT proteins AM340_RS07270 PF02824 TGS domain AM340_RS07270 PF13291 ACT domain AM340_RS07275 PF01192 RNA polymerase Rpb6 AM340_RS07280 PF00625 Guanylate kinase AM340_RS07285 PF03120 NAD-dependent DNA ligase OB-fold domain AM340_RS07285 PF01653 NAD-dependent DNA ligase adenylation domain AM340_RS07290 PF03458 UPF0126 domain AM340_RS07300 PF08340 Domain of unknown function (DUF1732) AM340_RS07300 PF03755 YicC-like family, N-terminal region AM340_RS07310 PF03725 3' exoribonuclease family, domain 2 AM340_RS07310 PF01138 3' exoribonuclease family, domain 1 AM340_RS07315 PF00156 Phosphoribosyl transferase domain AM340_RS07320 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS07325 PF00440 Bacterial regulatory proteins, tetR family AM340_RS07330 PF00692 dUTPase AM340_RS07335 PF02441 Flavoprotein AM340_RS07335 PF04127 DNA / pantothenate metabolism flavoprotein AM340_RS07340 PF04002 RadC-like JAB domain AM340_RS07345 PF00830 Ribosomal L28 family AM340_RS07350 PF00471 Ribosomal protein L33 AM340_RS07355 PF06827 Zinc finger found in FPG and IleRS AM340_RS07355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM340_RS07355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM340_RS07360 PF01467 Cytidylyltransferase-like AM340_RS07365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM340_RS07370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM340_RS07375 PF13439 Glycosyltransferase Family 4 AM340_RS07375 PF00534 Glycosyl transferases group 1 AM340_RS07385 PF01501 Glycosyl transferase family 8 AM340_RS07385 PF08437 Glycosyl transferase family 8 C-terminal AM340_RS07390 PF08437 Glycosyl transferase family 8 C-terminal AM340_RS07390 PF01501 Glycosyl transferase family 8 AM340_RS07395 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) AM340_RS07400 PF01501 Glycosyl transferase family 8 AM340_RS07400 PF08437 Glycosyl transferase family 8 C-terminal AM340_RS07405 PF00535 Glycosyl transferase family 2 AM340_RS07410 PF04932 O-Antigen ligase AM340_RS07415 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM340_RS07420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM340_RS07425 PF01370 NAD dependent epimerase/dehydratase family AM340_RS07430 PF00155 Aminotransferase class I and II AM340_RS07435 PF00107 Zinc-binding dehydrogenase AM340_RS07435 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS07440 PF00535 Glycosyl transferase family 2 AM340_RS07445 PF04748 Divergent polysaccharide deacetylase AM340_RS07450 PF01551 Peptidase family M23 AM340_RS07455 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM340_RS07455 PF01676 Metalloenzyme superfamily AM340_RS07460 PF00581 Rhodanese-like domain AM340_RS07465 PF00462 Glutaredoxin AM340_RS07470 PF02556 Preprotein translocase subunit SecB AM340_RS07475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM340_RS07475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM340_RS07480 PF06426 Serine acetyltransferase, N-terminal AM340_RS07480 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS07485 PF00588 SpoU rRNA Methylase family AM340_RS07490 PF01070 FMN-dependent dehydrogenase AM340_RS07495 PF00392 Bacterial regulatory proteins, gntR family AM340_RS07495 PF07729 FCD domain AM340_RS07500 PF02652 L-lactate permease AM340_RS07505 PF03895 YadA-like membrane anchor domain AM340_RS07505 PF05658 Head domain of trimeric autotransporter adhesin AM340_RS07505 PF05662 Coiled stalk of trimeric autotransporter adhesin AM340_RS07505 PF13018 Extended Signal Peptide of Type V secretion system AM340_RS07510 PF11622 Protein of unknown function (DUF3251) AM340_RS07520 PF10928 Protein of unknown function (DUF2810) AM340_RS07530 PF05068 Mannitol repressor AM340_RS07535 PF08125 Mannitol dehydrogenase C-terminal domain AM340_RS07535 PF01232 Mannitol dehydrogenase Rossmann domain AM340_RS07540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS07540 PF02378 Phosphotransferase system, EIIC AM340_RS07540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS07545 PF11742 Protein of unknown function (DUF3302) AM340_RS07550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS07550 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS07560 PF12390 Selenocysteine synthase N terminal AM340_RS07560 PF03841 L-seryl-tRNA selenium transferase AM340_RS07565 PF03144 Elongation factor Tu domain 2 AM340_RS07565 PF00009 Elongation factor Tu GTP binding domain AM340_RS07565 PF09107 Elongation factor SelB, winged helix AM340_RS07565 PF09106 Elongation factor SelB, winged helix AM340_RS07570 PF00465 Iron-containing alcohol dehydrogenase AM340_RS07580 PF00171 Aldehyde dehydrogenase family AM340_RS07590 PF11742 Protein of unknown function (DUF3302) AM340_RS07595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS07595 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS07600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS07600 PF03466 LysR substrate binding domain AM340_RS07605 PF06629 MltA-interacting protein MipA AM340_RS07625 PF00596 Class II Aldolase and Adducin N-terminal domain AM340_RS07630 PF01261 Xylose isomerase-like TIM barrel AM340_RS07635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM340_RS07640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM340_RS07640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM340_RS07645 PF03480 Bacterial extracellular solute-binding protein, family 7 AM340_RS07650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM340_RS07655 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AM340_RS07660 PF04074 YhcH/YjgK/YiaL AM340_RS07665 PF02615 Malate/L-lactate dehydrogenase AM340_RS07670 PF09339 IclR helix-turn-helix domain AM340_RS07670 PF01614 Bacterial transcriptional regulator AM340_RS07675 PF13247 4Fe-4S dicluster domain AM340_RS07680 PF00155 Aminotransferase class I and II AM340_RS07685 PF00128 Alpha amylase, catalytic domain AM340_RS07690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM340_RS07695 PF12833 Helix-turn-helix domain AM340_RS07700 PF02653 Branched-chain amino acid transport system / permease component AM340_RS07705 PF00005 ABC transporter AM340_RS07710 PF13407 Periplasmic binding protein domain AM340_RS07720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM340_RS07720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM340_RS07730 PF05360 yiaA/B two helix domain AM340_RS07735 PF01757 Acyltransferase family AM340_RS07740 PF13983 YsaB-like lipoprotein AM340_RS07745 PF02091 Glycyl-tRNA synthetase alpha subunit AM340_RS07750 PF05746 DALR anticodon binding domain AM340_RS07750 PF02092 Glycyl-tRNA synthetase beta subunit AM340_RS07760 PF01848 Hok/gef family AM340_RS07765 PF00313 'Cold-shock' DNA-binding domain AM340_RS07770 PF01381 Helix-turn-helix AM340_RS07775 PF11254 Protein of unknown function (DUF3053) AM340_RS07780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM340_RS07780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM340_RS07785 PF00691 OmpA family AM340_RS07785 PF13488 Glycine zipper AM340_RS07790 PF00384 Molybdopterin oxidoreductase AM340_RS07790 PF18364 Molybdopterin oxidoreductase N-terminal domain AM340_RS07790 PF01568 Molydopterin dinucleotide binding domain AM340_RS07795 PF00583 Acetyltransferase (GNAT) family AM340_RS07800 PF03352 Methyladenine glycosylase AM340_RS07805 PF03797 Autotransporter beta-domain AM340_RS07815 PF07690 Major Facilitator Superfamily AM340_RS07820 PF08019 Phosphoethanolamine transferase EptA/EptB AM340_RS07820 PF00884 Sulfatase AM340_RS07830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS07845 PF12911 N-terminal TM domain of oligopeptide transport permease C AM340_RS07850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM340_RS07850 PF00005 ABC transporter AM340_RS07855 PF00005 ABC transporter AM340_RS07855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM340_RS07860 PF03222 Tryptophan/tyrosine permease family AM340_RS07870 PF13940 Toxin Ldr, type I toxin-antitoxin system AM340_RS07875 PF13940 Toxin Ldr, type I toxin-antitoxin system AM340_RS07885 PF13940 Toxin Ldr, type I toxin-antitoxin system AM340_RS07890 PF13940 Toxin Ldr, type I toxin-antitoxin system AM340_RS07900 PF13006 Insertion element 4 transposase N-terminal AM340_RS07900 PF01609 Transposase DDE domain AM340_RS07910 PF11120 Cellulose biosynthesis protein BcsF AM340_RS07915 PF10995 Cellulose biosynthesis GIL AM340_RS07920 PF10945 Cellulose biosynthesis protein BcsR AM340_RS07925 PF06564 Cellulose biosynthesis protein BcsQ AM340_RS07935 PF03170 Bacterial cellulose synthase subunit AM340_RS07940 PF01270 Glycosyl hydrolases family 8 AM340_RS07945 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM340_RS07950 PF00563 EAL domain AM340_RS07950 PF00672 HAMP domain AM340_RS07950 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS07950 PF17154 Gammaproteobacterial periplasmic sensor domain AM340_RS07955 PF00375 Sodium:dicarboxylate symporter family AM340_RS07965 PF05193 Peptidase M16 inactive domain AM340_RS07965 PF00675 Insulinase (Peptidase family M16) AM340_RS07970 PF00294 pfkB family carbohydrate kinase AM340_RS07980 PF00563 EAL domain AM340_RS07985 PF05170 AsmA family AM340_RS07990 PF00083 Sugar (and other) transporter AM340_RS07990 PF07690 Major Facilitator Superfamily AM340_RS07995 PF03631 Virulence factor BrkB AM340_RS08000 PF03466 LysR substrate binding domain AM340_RS08000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS08005 PF00196 Bacterial regulatory proteins, luxR family AM340_RS08010 PF01204 Trehalase AM340_RS08015 PF03150 Di-haem cytochrome c peroxidase AM340_RS08015 PF00034 Cytochrome c AM340_RS08015 PF14376 Haem-binding domain AM340_RS08020 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM340_RS08025 PF12833 Helix-turn-helix domain AM340_RS08030 PF12833 Helix-turn-helix domain AM340_RS08040 PF00873 AcrB/AcrD/AcrF family AM340_RS08045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS08045 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS08055 PF00196 Bacterial regulatory proteins, luxR family AM340_RS08060 PF03729 Short repeat of unknown function (DUF308) AM340_RS08065 PF06411 HdeA/HdeB family AM340_RS08070 PF06411 HdeA/HdeB family AM340_RS08075 PF02308 MgtC family AM340_RS08080 PF00005 ABC transporter AM340_RS08085 PF01032 FecCD transport family AM340_RS08095 PF06228 Haem utilisation ChuX/HutX AM340_RS08100 PF04055 Radical SAM superfamily AM340_RS08120 PF07715 TonB-dependent Receptor Plug Domain AM340_RS08120 PF00593 TonB dependent receptor AM340_RS08125 PF05171 Haemin-degrading HemS.ChuX domain AM340_RS08130 PF00196 Bacterial regulatory proteins, luxR family AM340_RS08140 PF03843 Outer membrane lipoprotein Slp family AM340_RS08165 PF03960 ArsC family AM340_RS08170 PF02040 Arsenical pump membrane protein AM340_RS08175 PF01022 Bacterial regulatory protein, arsR family AM340_RS08190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM340_RS08190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS08195 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM340_RS08200 PF01432 Peptidase family M3 AM340_RS08205 PF04445 Putative SAM-dependent methyltransferase AM340_RS08210 PF00854 POT family AM340_RS08215 PF00582 Universal stress protein family AM340_RS08220 PF10625 Universal stress protein B (UspB) AM340_RS08225 PF01384 Phosphate transporter family AM340_RS08235 PF10951 Protein of unknown function (DUF2776) AM340_RS08240 PF13258 Domain of unknown function (DUF4049) AM340_RS08245 PF01609 Transposase DDE domain AM340_RS08245 PF13006 Insertion element 4 transposase N-terminal AM340_RS08250 PF13258 Domain of unknown function (DUF4049) AM340_RS08255 PF13533 Biotin-lipoyl like AM340_RS08260 PF00005 ABC transporter AM340_RS08280 PF01116 Fructose-bisphosphate aldolase class-II AM340_RS08285 PF00381 PTS HPr component phosphorylation site AM340_RS08295 PF03611 PTS system sugar-specific permease component AM340_RS08300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS08310 PF07702 UTRA domain AM340_RS08310 PF00392 Bacterial regulatory proteins, gntR family AM340_RS08315 PF08753 NikR C terminal nickel binding domain AM340_RS08315 PF01402 Ribbon-helix-helix protein, copG family AM340_RS08320 PF00005 ABC transporter AM340_RS08325 PF00005 ABC transporter AM340_RS08330 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS08335 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS08340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS08345 PF01648 4'-phosphopantetheinyl transferase superfamily AM340_RS08350 PF01594 AI-2E family transporter AM340_RS08355 PF07690 Major Facilitator Superfamily AM340_RS08360 PF08786 DcrB AM340_RS08365 PF02592 Putative vitamin uptake transporter AM340_RS08370 PF01206 Sulfurtransferase TusA AM340_RS08375 PF00403 Heavy-metal-associated domain AM340_RS08380 PF07947 YhhN family AM340_RS08385 PF10694 Protein of unknown function (DUF2500) AM340_RS08390 PF06611 Protein of unknown function (DUF1145) AM340_RS08400 PF02881 SRP54-type protein, helical bundle domain AM340_RS08400 PF00448 SRP54-type protein, GTPase domain AM340_RS08405 PF00005 ABC transporter AM340_RS08410 PF18075 FtsX extracellular domain AM340_RS08410 PF02687 FtsX-like permease family AM340_RS08415 PF04545 Sigma-70, region 4 AM340_RS08415 PF04542 Sigma-70 region 2 AM340_RS08425 PF13458 Periplasmic binding protein AM340_RS08430 PF12568 Acetyltransferase (GNAT) domain, PanZ AM340_RS08435 PF13458 Periplasmic binding protein AM340_RS08440 PF02653 Branched-chain amino acid transport system / permease component AM340_RS08445 PF11862 Domain of unknown function (DUF3382) AM340_RS08445 PF02653 Branched-chain amino acid transport system / permease component AM340_RS08450 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM340_RS08450 PF00005 ABC transporter AM340_RS08455 PF00005 ABC transporter AM340_RS08465 PF13416 Bacterial extracellular solute-binding protein AM340_RS08470 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS08475 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS08480 PF00005 ABC transporter AM340_RS08480 PF17912 MalK OB fold domain AM340_RS08485 PF03009 Glycerophosphoryl diester phosphodiesterase family AM340_RS08490 PF10956 Protein of unknown function (DUF2756) AM340_RS08500 PF15567 Immunity protein 35 AM340_RS08515 PF05638 Type VI secretion system effector, Hcp AM340_RS08520 PF00583 Acetyltransferase (GNAT) family AM340_RS08530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM340_RS08530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM340_RS08535 PF02678 Pirin AM340_RS08535 PF17954 Quercetinase C-terminal cupin domain AM340_RS08540 PF00356 Bacterial regulatory proteins, lacI family AM340_RS08540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM340_RS08545 PF01202 Shikimate kinase AM340_RS08550 PF02447 GntP family permease AM340_RS08555 PF00570 HRDC domain AM340_RS08555 PF00271 Helicase conserved C-terminal domain AM340_RS08555 PF16124 RecQ zinc-binding AM340_RS08555 PF09382 RQC domain AM340_RS08555 PF00270 DEAD/DEAH box helicase AM340_RS08565 PF01914 MarC family integral membrane protein AM340_RS08570 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM340_RS08570 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM340_RS08575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM340_RS08575 PF00128 Alpha amylase, catalytic domain AM340_RS08575 PF02806 Alpha amylase, C-terminal all-beta domain AM340_RS08580 PF00128 Alpha amylase, catalytic domain AM340_RS08580 PF18390 Glycogen debranching enzyme C-terminal domain AM340_RS08580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM340_RS08585 PF00483 Nucleotidyl transferase AM340_RS08590 PF00534 Glycosyl transferases group 1 AM340_RS08590 PF08323 Starch synthase catalytic domain AM340_RS08595 PF00343 Carbohydrate phosphorylase AM340_RS08615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM340_RS08615 PF01266 FAD dependent oxidoreductase AM340_RS08620 PF00581 Rhodanese-like domain AM340_RS08625 PF01694 Rhomboid family AM340_RS08625 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM340_RS08630 PF08220 DeoR-like helix-turn-helix domain AM340_RS08630 PF00455 DeoR C terminal sensor domain AM340_RS08635 PF00158 Sigma-54 interaction domain AM340_RS08635 PF06956 Regulator of RNA terminal phosphate cyclase AM340_RS08640 PF01139 tRNA-splicing ligase RtcB AM340_RS08645 PF01137 RNA 3'-terminal phosphate cyclase AM340_RS08645 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AM340_RS08650 PF00196 Bacterial regulatory proteins, luxR family AM340_RS08650 PF17874 MalT-like TPR region AM340_RS08655 PF00343 Carbohydrate phosphorylase AM340_RS08660 PF02446 4-alpha-glucanotransferase AM340_RS08665 PF02447 GntP family permease AM340_RS08670 PF01521 Iron-sulphur cluster biosynthesis AM340_RS08670 PF01106 NifU-like domain AM340_RS08675 PF00156 Phosphoribosyl transferase domain AM340_RS08680 PF00561 alpha/beta hydrolase fold AM340_RS08685 PF04754 Putative transposase, YhgA-like AM340_RS08695 PF09012 FeoC like transcriptional regulator AM340_RS08700 PF07664 Ferrous iron transport protein B C terminus AM340_RS08700 PF02421 Ferrous iron transport protein B AM340_RS08700 PF07670 Nucleoside recognition AM340_RS08700 PF17910 FeoB cytosolic helical domain AM340_RS08705 PF04023 FeoA domain AM340_RS08715 PF17674 HHH domain AM340_RS08715 PF00575 S1 RNA binding domain AM340_RS08715 PF09371 Tex-like protein N-terminal domain AM340_RS08715 PF16921 Tex protein YqgF-like domain AM340_RS08720 PF01272 Transcription elongation factor, GreA/GreB, C-term AM340_RS08720 PF03449 Transcription elongation factor, N-terminal AM340_RS08730 PF00486 Transcriptional regulatory protein, C terminal AM340_RS08730 PF00072 Response regulator receiver domain AM340_RS08735 PF00672 HAMP domain AM340_RS08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS08735 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS08750 PF01293 Phosphoenolpyruvate carboxykinase AM340_RS08760 PF13687 Domain of unknown function (DUF4153) AM340_RS08765 PF01430 Hsp33 protein AM340_RS08770 PF01479 S4 domain AM340_RS08775 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS08780 PF07095 Intracellular growth attenuator protein IgaA AM340_RS08785 PF00293 NUDIX domain AM340_RS08790 PF00905 Penicillin binding protein transpeptidase domain AM340_RS08790 PF00912 Transglycosylase AM340_RS08790 PF17092 Penicillin-binding protein OB-like domain AM340_RS08800 PF05137 Fimbrial assembly protein (PilN) AM340_RS08810 PF10748 DNA utilization proteins HofP AM340_RS08815 PF03958 Bacterial type II/III secretion system short domain AM340_RS08815 PF00263 Bacterial type II and III secretion system protein AM340_RS08820 PF01202 Shikimate kinase AM340_RS08825 PF01761 3-dehydroquinate synthase AM340_RS08830 PF05036 Sporulation related domain AM340_RS08835 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM340_RS08840 PF00834 Ribulose-phosphate 3 epimerase family AM340_RS08845 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS08850 PF00579 tRNA synthetases class I (W and Y) AM340_RS08855 PF14502 Helix-turn-helix domain AM340_RS08855 PF14503 YhfZ C-terminal domain AM340_RS08865 PF01168 Alanine racemase, N-terminal domain AM340_RS08870 PF01676 Metalloenzyme superfamily AM340_RS08875 PF02126 Phosphotriesterase family AM340_RS08880 PF10941 Protein of unknown function DUF2620 AM340_RS08885 PF10797 Protein of unknown function AM340_RS08890 PF00155 Aminotransferase class I and II AM340_RS08895 PF13978 Protein of unknown function (DUF4223) AM340_RS08900 PF14824 Sirohaem biosynthesis protein central AM340_RS08900 PF10414 Sirohaem synthase dimerisation region AM340_RS08900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM340_RS08905 PF01226 Formate/nitrite transporter AM340_RS08910 PF13806 Rieske-like [2Fe-2S] domain AM340_RS08915 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM340_RS08915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS08915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM340_RS08915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM340_RS08915 PF04324 BFD-like [2Fe-2S] binding domain AM340_RS08920 PF07690 Major Facilitator Superfamily AM340_RS08925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM340_RS08930 PF10832 Protein of unknown function (DUF2559) AM340_RS08935 PF02661 Fic/DOC family AM340_RS08940 PF00117 Glutamine amidotransferase class-I AM340_RS08945 PF00202 Aminotransferase class-III AM340_RS08950 PF12805 FUSC-like inner membrane protein yccS AM340_RS08955 PF00027 Cyclic nucleotide-binding domain AM340_RS08955 PF13545 Crp-like helix-turn-helix domain AM340_RS08965 PF02566 OsmC-like protein AM340_RS08970 PF00485 Phosphoribulokinase / Uridine kinase family AM340_RS08975 PF06794 Uncharacterised protein family (UPF0270) AM340_RS08980 PF00561 alpha/beta hydrolase fold AM340_RS08985 PF12848 ABC transporter AM340_RS08985 PF00005 ABC transporter AM340_RS08995 PF02525 Flavodoxin-like fold AM340_RS09005 PF09526 Probable metal-binding protein (DUF2387) AM340_RS09010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM340_RS09015 PF04102 SlyX AM340_RS09020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM340_RS09020 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM340_RS09025 PF08348 YheO-like PAS domain AM340_RS09025 PF13309 HTH domain AM340_RS09030 PF02635 DsrE/DsrF-like family AM340_RS09035 PF02635 DsrE/DsrF-like family AM340_RS09040 PF04077 DsrH like protein AM340_RS09045 PF00164 Ribosomal protein S12/S23 AM340_RS09050 PF00177 Ribosomal protein S7p/S5e AM340_RS09055 PF03764 Elongation factor G, domain IV AM340_RS09055 PF00009 Elongation factor Tu GTP binding domain AM340_RS09055 PF03144 Elongation factor Tu domain 2 AM340_RS09055 PF14492 Elongation Factor G, domain II AM340_RS09055 PF00679 Elongation factor G C-terminus AM340_RS09060 PF03143 Elongation factor Tu C-terminal domain AM340_RS09060 PF00009 Elongation factor Tu GTP binding domain AM340_RS09060 PF03144 Elongation factor Tu domain 2 AM340_RS09075 PF04324 BFD-like [2Fe-2S] binding domain AM340_RS09080 PF00210 Ferritin-like domain AM340_RS09085 PF01478 Type IV leader peptidase family AM340_RS09095 PF00338 Ribosomal protein S10p/S20e AM340_RS09100 PF00297 Ribosomal protein L3 AM340_RS09105 PF00573 Ribosomal protein L4/L1 family AM340_RS09110 PF00276 Ribosomal protein L23 AM340_RS09115 PF03947 Ribosomal Proteins L2, C-terminal domain AM340_RS09115 PF00181 Ribosomal Proteins L2, RNA binding domain AM340_RS09120 PF00203 Ribosomal protein S19 AM340_RS09125 PF00237 Ribosomal protein L22p/L17e AM340_RS09130 PF00189 Ribosomal protein S3, C-terminal domain AM340_RS09130 PF07650 KH domain AM340_RS09135 PF00252 Ribosomal protein L16p/L10e AM340_RS09140 PF00831 Ribosomal L29 protein AM340_RS09145 PF00366 Ribosomal protein S17 AM340_RS09150 PF00238 Ribosomal protein L14p/L23e AM340_RS09155 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM340_RS09155 PF00467 KOW motif AM340_RS09160 PF00673 ribosomal L5P family C-terminus AM340_RS09160 PF00281 Ribosomal protein L5 AM340_RS09165 PF00253 Ribosomal protein S14p/S29e AM340_RS09170 PF00410 Ribosomal protein S8 AM340_RS09175 PF00347 Ribosomal protein L6 AM340_RS09180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM340_RS09185 PF03719 Ribosomal protein S5, C-terminal domain AM340_RS09185 PF00333 Ribosomal protein S5, N-terminal domain AM340_RS09190 PF00327 Ribosomal protein L30p/L7e AM340_RS09195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM340_RS09200 PF00344 SecY translocase AM340_RS09205 PF00444 Ribosomal protein L36 AM340_RS09210 PF00416 Ribosomal protein S13/S18 AM340_RS09215 PF00411 Ribosomal protein S11 AM340_RS09220 PF00163 Ribosomal protein S4/S9 N-terminal domain AM340_RS09220 PF01479 S4 domain AM340_RS09225 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM340_RS09225 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM340_RS09225 PF01000 RNA polymerase Rpb3/RpoA insert domain AM340_RS09230 PF01196 Ribosomal protein L17 AM340_RS09235 PF09350 Domain of unknown function (DUF1992) AM340_RS09240 PF13411 MerR HTH family regulatory protein AM340_RS09245 PF03889 Alternative ribosome-rescue factor A AM340_RS09250 PF01741 Large-conductance mechanosensitive channel, MscL AM340_RS09255 PF02080 TrkA-C domain AM340_RS09255 PF02254 TrkA-N domain AM340_RS09260 PF01029 NusB family AM340_RS09260 PF01189 16S rRNA methyltransferase RsmB/F AM340_RS09265 PF02911 Formyl transferase, C-terminal domain AM340_RS09265 PF00551 Formyl transferase AM340_RS09270 PF01327 Polypeptide deformylase AM340_RS09275 PF17782 DprA winged helix domain AM340_RS09275 PF02481 DNA recombination-mediator protein A AM340_RS09280 PF04361 Protein of unknown function (DUF494) AM340_RS09285 PF01396 Topoisomerase DNA binding C4 zinc finger AM340_RS09290 PF01300 Telomere recombination AM340_RS09295 PF08501 Shikimate dehydrogenase substrate binding domain AM340_RS09295 PF01488 Shikimate / quinate 5-dehydrogenase AM340_RS09295 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM340_RS09300 PF07369 Protein of unknown function (DUF1488) AM340_RS09305 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS09365 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS09370 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS09375 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS09400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS09400 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS09410 PF00440 Bacterial regulatory proteins, tetR family AM340_RS09410 PF08361 MAATS-type transcriptional repressor, C-terminal region AM340_RS09415 PF10831 Protein of unknown function (DUF2556) AM340_RS09420 PF01555 DNA methylase AM340_RS09425 PF02954 Bacterial regulatory protein, Fis family AM340_RS09430 PF01207 Dihydrouridine synthase (Dus) AM340_RS09440 PF00474 Sodium:solute symporter family AM340_RS09445 PF06196 Protein of unknown function (DUF997) AM340_RS09450 PF00294 pfkB family carbohydrate kinase AM340_RS09455 PF00455 DeoR C terminal sensor domain AM340_RS09455 PF08220 DeoR-like helix-turn-helix domain AM340_RS09460 PF01116 Fructose-bisphosphate aldolase class-II AM340_RS09465 PF13407 Periplasmic binding protein domain AM340_RS09470 PF00005 ABC transporter AM340_RS09475 PF02653 Branched-chain amino acid transport system / permease component AM340_RS09480 PF00294 pfkB family carbohydrate kinase AM340_RS09490 PF02785 Biotin carboxylase C-terminal domain AM340_RS09490 PF00289 Biotin carboxylase, N-terminal domain AM340_RS09490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM340_RS09495 PF00364 Biotin-requiring enzyme AM340_RS09500 PF00107 Zinc-binding dehydrogenase AM340_RS09500 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS09505 PF00563 EAL domain AM340_RS09505 PF17157 Gammaproteobacterial periplasmic sensor domain AM340_RS09505 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS09520 PF04085 rod shape-determining protein MreC AM340_RS09525 PF04093 rod shape-determining protein MreD AM340_RS09530 PF02545 Maf-like protein AM340_RS09535 PF00575 S1 RNA binding domain AM340_RS09535 PF10150 Ribonuclease E/G family AM340_RS09540 PF13502 AsmA-like C-terminal region AM340_RS09540 PF13116 Protein of unknown function AM340_RS09545 PF01523 Putative modulator of DNA gyrase AM340_RS09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS09550 PF03466 LysR substrate binding domain AM340_RS09555 PF07869 Protein of unknown function (DUF1656) AM340_RS09560 PF13533 Biotin-lipoyl like AM340_RS09565 PF04632 Fusaric acid resistance protein family AM340_RS09570 PF01337 Barstar (barnase inhibitor) AM340_RS09575 PF07338 Protein of unknown function (DUF1471) AM340_RS09580 PF01316 Arginine repressor, DNA binding domain AM340_RS09580 PF02863 Arginine repressor, C-terminal domain AM340_RS09585 PF00056 lactate/malate dehydrogenase, NAD binding domain AM340_RS09585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM340_RS09590 PF01609 Transposase DDE domain AM340_RS09590 PF13006 Insertion element 4 transposase N-terminal AM340_RS09595 PF13180 PDZ domain AM340_RS09600 PF00595 PDZ domain AM340_RS09600 PF13180 PDZ domain AM340_RS09605 PF06295 Protein of unknown function (DUF1043) AM340_RS09610 PF03969 AFG1-like ATPase AM340_RS09615 PF00572 Ribosomal protein L13 AM340_RS09620 PF00380 Ribosomal protein S9/S16 AM340_RS09630 PF02798 Glutathione S-transferase, N-terminal domain AM340_RS09630 PF00043 Glutathione S-transferase, C-terminal domain AM340_RS09635 PF04386 Stringent starvation protein B AM340_RS09640 PF03606 C4-dicarboxylate anaerobic carrier AM340_RS09650 PF07729 FCD domain AM340_RS09650 PF00392 Bacterial regulatory proteins, gntR family AM340_RS09655 PF00701 Dihydrodipicolinate synthetase family AM340_RS09660 PF07690 Major Facilitator Superfamily AM340_RS09665 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM340_RS09670 PF00480 ROK family AM340_RS09675 PF04074 YhcH/YjgK/YiaL AM340_RS09680 PF06250 YhcG PDDEXK nuclease domain AM340_RS09680 PF17761 DUF1016 N-terminal domain AM340_RS09685 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS09685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM340_RS09690 PF01493 GXGXG motif AM340_RS09690 PF01645 Conserved region in glutamate synthase AM340_RS09690 PF00310 Glutamine amidotransferases class-II AM340_RS09690 PF04898 Glutamate synthase central domain AM340_RS09705 PF04055 Radical SAM superfamily AM340_RS09705 PF16199 Radical_SAM C-terminal domain AM340_RS09710 PF18415 Histidine kinase receptor ArcB trans-membrane domain AM340_RS09710 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS09710 PF00072 Response regulator receiver domain AM340_RS09710 PF01627 Hpt domain AM340_RS09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS09710 PF00989 PAS fold AM340_RS09720 PF00912 Transglycosylase AM340_RS09725 PF10707 PhoP regulatory network protein YrbL AM340_RS09730 PF00381 PTS HPr component phosphorylation site AM340_RS09735 PF03668 P-loop ATPase protein family AM340_RS09740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS09745 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM340_RS09750 PF04963 Sigma-54 factor, core binding domain AM340_RS09750 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM340_RS09750 PF04552 Sigma-54, DNA binding domain AM340_RS09755 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM340_RS09755 PF00005 ABC transporter AM340_RS09760 PF03968 OstA-like protein AM340_RS09765 PF06835 Lipopolysaccharide-assembly, LptC-related AM340_RS09775 PF01380 SIS domain AM340_RS09775 PF00571 CBS domain AM340_RS09780 PF01699 Sodium/calcium exchanger protein AM340_RS09785 PF00005 ABC transporter AM340_RS09790 PF02405 Permease MlaE AM340_RS09795 PF02470 MlaD protein AM340_RS09800 PF05494 MlaC protein AM340_RS09805 PF13466 STAS domain AM340_RS09810 PF01722 BolA-like protein AM340_RS09815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM340_RS09820 PF13693 Winged helix-turn-helix DNA-binding AM340_RS09825 PF00348 Polyprenyl synthetase AM340_RS09830 PF00829 Ribosomal prokaryotic L21 protein AM340_RS09835 PF01016 Ribosomal L27 protein AM340_RS09840 PF00892 EamA-like transporter family AM340_RS09845 PF01018 GTP1/OBG AM340_RS09845 PF01926 50S ribosome-binding GTPase AM340_RS09850 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM340_RS09855 PF03449 Transcription elongation factor, N-terminal AM340_RS09855 PF01272 Transcription elongation factor, GreA/GreB, C-term AM340_RS09860 PF01985 CRS1 / YhbY (CRM) domain AM340_RS09865 PF01728 FtsJ-like methyltransferase AM340_RS09870 PF00004 ATPase family associated with various cellular activities (AAA) AM340_RS09870 PF01434 Peptidase family M41 AM340_RS09870 PF06480 FtsH Extracellular AM340_RS09870 PF17862 AAA+ lid domain AM340_RS09875 PF00809 Pterin binding enzyme AM340_RS09880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM340_RS09880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM340_RS09880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM340_RS09880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM340_RS09885 PF03840 Preprotein translocase SecG subunit AM340_RS09895 PF00884 Sulfatase AM340_RS09900 PF00764 Arginosuccinate synthase AM340_RS09910 PF17384 RimP C-terminal SH3 domain AM340_RS09910 PF02576 RimP N-terminal domain AM340_RS09915 PF13184 NusA-like KH domain AM340_RS09915 PF08529 NusA N-terminal domain AM340_RS09915 PF00575 S1 RNA binding domain AM340_RS09920 PF08364 Bacterial translation initiation factor IF-2 associated region AM340_RS09920 PF11987 Translation-initiation factor 2 AM340_RS09920 PF00009 Elongation factor Tu GTP binding domain AM340_RS09920 PF04760 Translation initiation factor IF-2, N-terminal region AM340_RS09925 PF02033 Ribosome-binding factor A AM340_RS09930 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM340_RS09930 PF09157 Pseudouridine synthase II TruB, C-terminal AM340_RS09930 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM340_RS09935 PF00312 Ribosomal protein S15 AM340_RS09940 PF00575 S1 RNA binding domain AM340_RS09940 PF00013 KH domain AM340_RS09940 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM340_RS09940 PF01138 3' exoribonuclease family, domain 1 AM340_RS09940 PF03725 3' exoribonuclease family, domain 2 AM340_RS09945 PF13181 Tetratricopeptide repeat AM340_RS09945 PF07719 Tetratricopeptide repeat AM340_RS09955 PF00271 Helicase conserved C-terminal domain AM340_RS09955 PF12343 Cold shock protein DEAD box A AM340_RS09955 PF00270 DEAD/DEAH box helicase AM340_RS09955 PF03880 DbpA RNA binding domain AM340_RS09960 PF03222 Tryptophan/tyrosine permease family AM340_RS09965 PF00296 Luciferase-like monooxygenase AM340_RS09970 PF01136 Peptidase family U32 AM340_RS09975 PF01136 Peptidase family U32 AM340_RS09980 PF02036 SCP-2 sterol transfer family AM340_RS09985 PF13508 Acetyltransferase (GNAT) domain AM340_RS09990 PF01541 GIY-YIG catalytic domain AM340_RS10000 PF01965 DJ-1/PfpI family AM340_RS10005 PF13460 NAD(P)H-binding AM340_RS10010 PF03773 Predicted permease AM340_RS10015 PF04972 BON domain AM340_RS10020 PF13580 SIS domain AM340_RS10025 PF02021 Uncharacterised protein family UPF0102 AM340_RS10030 PF04348 LppC putative lipoprotein AM340_RS10035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM340_RS10040 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM340_RS10045 PF03613 PTS system mannose/fructose/sorbose family IID component AM340_RS10050 PF03609 PTS system sorbose-specific iic component AM340_RS10055 PF03830 PTS system sorbose subfamily IIB component AM340_RS10060 PF01116 Fructose-bisphosphate aldolase class-II AM340_RS10065 PF01380 SIS domain AM340_RS10070 PF01979 Amidohydrolase family AM340_RS10075 PF03610 PTS system fructose IIA component AM340_RS10080 PF03613 PTS system mannose/fructose/sorbose family IID component AM340_RS10085 PF03609 PTS system sorbose-specific iic component AM340_RS10090 PF03830 PTS system sorbose subfamily IIB component AM340_RS10095 PF08013 Tagatose 6 phosphate kinase AM340_RS10100 PF00455 DeoR C terminal sensor domain AM340_RS10100 PF08220 DeoR-like helix-turn-helix domain AM340_RS10105 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system AM340_RS10110 PF15937 prlF antitoxin for toxin YhaV_toxin AM340_RS10115 PF08666 SAF domain AM340_RS10115 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM340_RS10120 PF07690 Major Facilitator Superfamily AM340_RS10125 PF03328 HpcH/HpaI aldolase/citrate lyase family AM340_RS10130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM340_RS10130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM340_RS10135 PF02595 Glycerate kinase family AM340_RS10160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS10160 PF03466 LysR substrate binding domain AM340_RS10170 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS10175 PF03222 Tryptophan/tyrosine permease family AM340_RS10180 PF00871 Acetokinase family AM340_RS10185 PF01228 Glycine radical AM340_RS10185 PF02901 Pyruvate formate lyase-like AM340_RS10190 PF01042 Endoribonuclease L-PSP AM340_RS10195 PF03315 Serine dehydratase beta chain AM340_RS10195 PF03313 Serine dehydratase alpha chain AM340_RS10210 PF03313 Serine dehydratase alpha chain AM340_RS10220 PF02678 Pirin AM340_RS10220 PF17954 Quercetinase C-terminal cupin domain AM340_RS10225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS10225 PF03466 LysR substrate binding domain AM340_RS10235 PF05656 Protein of unknown function (DUF805) AM340_RS10240 PF05656 Protein of unknown function (DUF805) AM340_RS10245 PF13409 Glutathione S-transferase, N-terminal domain AM340_RS10250 PF07681 DoxX AM340_RS10255 PF13997 YqjK-like protein AM340_RS10260 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AM340_RS10265 PF05957 Bacterial protein of unknown function (DUF883) AM340_RS10270 PF06476 Protein of unknown function (DUF1090) AM340_RS10275 PF13721 SecD export protein N-terminal TM region AM340_RS10280 PF09335 SNARE associated Golgi protein AM340_RS10285 PF00392 Bacterial regulatory proteins, gntR family AM340_RS10285 PF07729 FCD domain AM340_RS10295 PF04449 CS1 type fimbrial major subunit AM340_RS10300 PF15976 CS1-pili formation C-terminal AM340_RS10300 PF16967 E-set like domain AM340_RS10300 PF17271 TcfC Usher-like barrel domain AM340_RS10310 PF07690 Major Facilitator Superfamily AM340_RS10315 PF02614 Glucuronate isomerase AM340_RS10320 PF08666 SAF domain AM340_RS10320 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM340_RS10325 PF10688 Bacterial inner membrane protein AM340_RS10330 PF00375 Sodium:dicarboxylate symporter family AM340_RS10340 PF03741 Integral membrane protein TerC family AM340_RS10345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM340_RS10350 PF02698 DUF218 domain AM340_RS10355 PF01863 Protein of unknown function DUF45 AM340_RS10360 PF05175 Methyltransferase small domain AM340_RS10365 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS10365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM340_RS10370 PF01204 Trehalase AM340_RS10380 PF13520 Amino acid permease AM340_RS10385 PF04074 YhcH/YjgK/YiaL AM340_RS10390 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM340_RS10390 PF00703 Glycosyl hydrolases family 2 AM340_RS10390 PF16353 Domain of unknown function(DUF4981) AM340_RS10390 PF02929 Beta galactosidase small chain AM340_RS10390 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM340_RS10395 PF00356 Bacterial regulatory proteins, lacI family AM340_RS10400 PF01588 Putative tRNA binding domain AM340_RS10405 PF00202 Aminotransferase class-III AM340_RS10415 PF08447 PAS fold AM340_RS10415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM340_RS10420 PF03551 Transcriptional regulator PadR-like family AM340_RS10425 PF08021 Siderophore-interacting FAD-binding domain AM340_RS10425 PF04954 Siderophore-interacting protein AM340_RS10435 PF03167 Uracil DNA glycosylase superfamily AM340_RS10440 PF13006 Insertion element 4 transposase N-terminal AM340_RS10440 PF01609 Transposase DDE domain AM340_RS10445 PF04545 Sigma-70, region 4 AM340_RS10445 PF04539 Sigma-70 region 3 AM340_RS10445 PF04542 Sigma-70 region 2 AM340_RS10445 PF04546 Sigma-70, non-essential region AM340_RS10445 PF03979 Sigma-70 factor, region 1.1 AM340_RS10445 PF00140 Sigma-70 factor, region 1.2 AM340_RS10450 PF01807 CHC2 zinc finger AM340_RS10450 PF08275 DNA primase catalytic core, N-terminal domain AM340_RS10450 PF08278 DNA primase DnaG DnaB-binding AM340_RS10450 PF10410 DnaB-helicase binding domain of primase AM340_RS10455 PF01165 Ribosomal protein S21 AM340_RS10465 PF00814 Glycoprotease family AM340_RS10470 PF00939 Sodium:sulfate symporter transmembrane region AM340_RS10475 PF05683 Fumarase C-terminus AM340_RS10480 PF05681 Fumarate hydratase (Fumerase) AM340_RS10490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS10490 PF03466 LysR substrate binding domain AM340_RS10495 PF02660 Glycerol-3-phosphate acyltransferase AM340_RS10500 PF02152 Dihydroneopterin aldolase AM340_RS10505 PF02673 Bacitracin resistance protein BacA AM340_RS10510 PF01743 Poly A polymerase head domain AM340_RS10510 PF12627 Probable RNA and SrmB- binding site of polymerase A AM340_RS10510 PF01966 HD domain AM340_RS10515 PF08239 Bacterial SH3 domain AM340_RS10525 PF01928 CYTH domain AM340_RS10530 PF08335 GlnD PII-uridylyltransferase AM340_RS10530 PF03710 Glutamate-ammonia ligase adenylyltransferase AM340_RS10535 PF01467 Cytidylyltransferase-like AM340_RS10535 PF00294 pfkB family carbohydrate kinase AM340_RS10550 PF15975 Flotillin AM340_RS10550 PF01145 SPFH domain / Band 7 family AM340_RS10555 PF07290 Protein of unknown function (DUF1449) AM340_RS10560 PF08971 Glycogen synthesis protein AM340_RS10575 PF13953 PapC C-terminal domain AM340_RS10575 PF00577 Outer membrane usher protein AM340_RS10575 PF13954 PapC N-terminal domain AM340_RS10580 PF00419 Fimbrial protein AM340_RS10585 PF04380 Membrane fusogenic activity AM340_RS10590 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM340_RS10600 PF02535 ZIP Zinc transporter AM340_RS10605 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM340_RS10610 PF03738 Glutathionylspermidine synthase preATP-grasp AM340_RS10615 PF06693 Protein of unknown function (DUF1190) AM340_RS10625 PF02321 Outer membrane efflux protein AM340_RS10630 PF00293 NUDIX domain AM340_RS10635 PF06853 Protein of unknown function (DUF1249) AM340_RS10640 PF00149 Calcineurin-like phosphoesterase AM340_RS10645 PF05728 Uncharacterised protein family (UPF0227) AM340_RS10650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS10650 PF00204 DNA gyrase B AM340_RS10650 PF01751 Toprim domain AM340_RS10650 PF00986 DNA gyrase B subunit, carboxyl terminus AM340_RS10655 PF03992 Antibiotic biosynthesis monooxygenase AM340_RS10660 PF02525 Flavodoxin-like fold AM340_RS10670 PF10840 Protein of unknown function (DUF2645) AM340_RS10675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS10675 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS10675 PF08521 Two-component sensor kinase N-terminal AM340_RS10680 PF00486 Transcriptional regulatory protein, C terminal AM340_RS10680 PF00072 Response regulator receiver domain AM340_RS10685 PF04076 Bacterial OB fold (BOF) protein AM340_RS10690 PF06445 GyrI-like small molecule binding domain AM340_RS10695 PF15723 Motility quorum-sensing regulator, toxin of MqsA AM340_RS10700 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AM340_RS10705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS10710 PF00521 DNA gyrase/topoisomerase IV, subunit A AM340_RS10710 PF03989 DNA gyrase C-terminal domain, beta-propeller AM340_RS10715 PF01553 Acyltransferase AM340_RS10720 PF00394 Multicopper oxidase AM340_RS10720 PF07731 Multicopper oxidase AM340_RS10720 PF07732 Multicopper oxidase AM340_RS10725 PF11842 Domain of unknown function (DUF3362) AM340_RS10725 PF08497 Radical SAM N-terminal AM340_RS10725 PF04055 Radical SAM superfamily AM340_RS10730 PF04728 Lipoprotein leucine-zipper AM340_RS10735 PF12883 Protein of unknown function (DUF3828) AM340_RS10740 PF00248 Aldo/keto reductase family AM340_RS10745 PF00465 Iron-containing alcohol dehydrogenase AM340_RS10750 PF06719 AraC-type transcriptional regulator N-terminus AM340_RS10750 PF12833 Helix-turn-helix domain AM340_RS10755 PF09335 SNARE associated Golgi protein AM340_RS10760 PF01053 Cys/Met metabolism PLP-dependent enzyme AM340_RS10770 PF01618 MotA/TolQ/ExbB proton channel family AM340_RS10775 PF02472 Biopolymer transport protein ExbD/TolR AM340_RS10785 PF03350 Uncharacterized protein family, UPF0114 AM340_RS10790 PF00248 Aldo/keto reductase family AM340_RS10795 PF01738 Dienelactone hydrolase family AM340_RS10800 PF11115 Protein of unknown function (DUF2623) AM340_RS10810 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM340_RS10810 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM340_RS10815 PF13247 4Fe-4S dicluster domain AM340_RS10820 PF03916 Polysulphide reductase, NrfD AM340_RS10825 PF00374 Nickel-dependent hydrogenase AM340_RS10830 PF01750 Hydrogenase maturation protease AM340_RS10835 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AM340_RS10840 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM340_RS10845 PF01455 HupF/HypC family AM340_RS10850 PF02798 Glutathione S-transferase, N-terminal domain AM340_RS10855 PF05257 CHAP domain AM340_RS10855 PF03738 Glutathionylspermidine synthase preATP-grasp AM340_RS10860 PF01384 Phosphate transporter family AM340_RS10880 PF01943 Polysaccharide biosynthesis protein AM340_RS10890 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM340_RS10895 PF03739 Lipopolysaccharide export system permease LptF/LptG AM340_RS10905 PF00155 Aminotransferase class I and II AM340_RS10910 PF00550 Phosphopantetheine attachment site AM340_RS10920 PF00501 AMP-binding enzyme AM340_RS10920 PF14535 AMP-binding enzyme C-terminal domain AM340_RS10930 PF07729 FCD domain AM340_RS10930 PF00392 Bacterial regulatory proteins, gntR family AM340_RS10935 PF01565 FAD binding domain AM340_RS10935 PF02913 FAD linked oxidases, C-terminal domain AM340_RS10940 PF01565 FAD binding domain AM340_RS10945 PF13183 4Fe-4S dicluster domain AM340_RS10945 PF02754 Cysteine-rich domain AM340_RS10950 PF03928 Haem-degrading AM340_RS10955 PF01274 Malate synthase AM340_RS10960 PF02652 L-lactate permease AM340_RS10970 PF17291 N-terminal domain of M60-like peptidases AM340_RS10970 PF13402 Peptidase M60, enhancin and enhancin-like AM340_RS10970 PF13322 Domain of unknown function (DUF4092) AM340_RS10980 PF01478 Type IV leader peptidase family AM340_RS10980 PF06750 Bacterial Peptidase A24 N-terminal domain AM340_RS10985 PF16549 Type II secretion system (T2SS) pilotin, S protein AM340_RS10990 PF11356 Type II secretion system protein C AM340_RS10995 PF03958 Bacterial type II/III secretion system short domain AM340_RS10995 PF00263 Bacterial type II and III secretion system protein AM340_RS11000 PF00437 Type II/IV secretion system protein AM340_RS11005 PF00482 Type II secretion system (T2SS), protein F AM340_RS11010 PF08334 Type II secretion system (T2SS), protein G AM340_RS11010 PF07963 Prokaryotic N-terminal methylation motif AM340_RS11015 PF12019 Type II transport protein GspH AM340_RS11020 PF02501 Type II secretion system (T2SS), protein I AM340_RS11020 PF07963 Prokaryotic N-terminal methylation motif AM340_RS11025 PF07963 Prokaryotic N-terminal methylation motif AM340_RS11025 PF11612 Type II secretion system (T2SS), protein J AM340_RS11030 PF03934 Type II secretion system (T2SS), protein K AM340_RS11035 PF12693 GspL periplasmic domain AM340_RS11040 PF04612 Type II secretion system (T2SS), protein M AM340_RS11045 PF01061 ABC-2 type transporter AM340_RS11050 PF00005 ABC transporter AM340_RS11060 PF08666 SAF domain AM340_RS11060 PF03102 NeuB family AM340_RS11065 PF13472 GDSL-like Lipase/Acylhydrolase family AM340_RS11065 PF02348 Cytidylyltransferase AM340_RS11070 PF02350 UDP-N-acetylglucosamine 2-epimerase AM340_RS11085 PF05159 Capsule polysaccharide biosynthesis protein AM340_RS11090 PF05159 Capsule polysaccharide biosynthesis protein AM340_RS11095 PF02348 Cytidylyltransferase AM340_RS11100 PF10531 SLBB domain AM340_RS11100 PF02563 Polysaccharide biosynthesis/export protein AM340_RS11110 PF00571 CBS domain AM340_RS11110 PF01380 SIS domain AM340_RS11125 PF00593 TonB dependent receptor AM340_RS11125 PF07715 TonB-dependent Receptor Plug Domain AM340_RS11135 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS11155 PF01695 IstB-like ATP binding protein AM340_RS11165 PF03245 Bacteriophage Rz lysis protein AM340_RS11225 PF04183 IucA / IucC family AM340_RS11225 PF06276 Ferric iron reductase FhuF-like transporter AM340_RS11235 PF06276 Ferric iron reductase FhuF-like transporter AM340_RS11235 PF04183 IucA / IucC family AM340_RS11240 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM340_RS11245 PF00593 TonB dependent receptor AM340_RS11245 PF07715 TonB-dependent Receptor Plug Domain AM340_RS11260 PF01527 Transposase AM340_RS11330 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS11340 PF04703 FaeA-like protein AM340_RS11360 PF00419 Fimbrial protein AM340_RS11365 PF00419 Fimbrial protein AM340_RS11370 PF03627 PapG carbohydrate binding domain AM340_RS11370 PF03628 PapG chaperone-binding domain AM340_RS11375 PF03628 PapG chaperone-binding domain AM340_RS11375 PF03627 PapG carbohydrate binding domain AM340_RS11385 PF01047 MarR family AM340_RS11415 PF13356 Arm DNA-binding domain AM340_RS11415 PF00589 Phage integrase family AM340_RS11425 PF04474 Protein of unknown function (DUF554) AM340_RS11435 PF01276 Orn/Lys/Arg decarboxylase, major domain AM340_RS11435 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM340_RS11435 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM340_RS11440 PF03825 Nucleoside H+ symporter AM340_RS11445 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM340_RS11445 PF01464 Transglycosylase SLT domain AM340_RS11450 PF04362 Bacterial Fe(2+) trafficking AM340_RS11455 PF00633 Helix-hairpin-helix motif AM340_RS11455 PF14815 NUDIX domain AM340_RS11455 PF00730 HhH-GPD superfamily base excision DNA repair protein AM340_RS11455 PF10576 Iron-sulfur binding domain of endonuclease III AM340_RS11460 PF02390 Putative methyltransferase AM340_RS11465 PF04320 Protein with unknown function (DUF469) AM340_RS11470 PF11101 Protein of unknown function (DUF2884) AM340_RS11475 PF17763 Glutaminase/Asparaginase C-terminal domain AM340_RS11475 PF00710 Asparaginase, N-terminal AM340_RS11480 PF06717 Protein of unknown function (DUF1202) AM340_RS11485 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM340_RS11495 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS11515 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AM340_RS11520 PF03480 Bacterial extracellular solute-binding protein, family 7 AM340_RS11525 PF04055 Radical SAM superfamily AM340_RS11525 PF06969 HemN C-terminal domain AM340_RS11530 PF01725 Ham1 family AM340_RS11535 PF02594 Uncharacterised ACR, YggU family COG1872 AM340_RS11540 PF02325 YGGT family AM340_RS11545 PF01168 Alanine racemase, N-terminal domain AM340_RS11550 PF00437 Type II/IV secretion system protein AM340_RS11555 PF03652 Holliday junction resolvase AM340_RS11560 PF02622 Uncharacterized ACR, COG1678 AM340_RS11565 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM340_RS11565 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM340_RS11570 PF04452 RNA methyltransferase AM340_RS11575 PF04231 Endonuclease I AM340_RS11580 PF17283 SprT-like zinc ribbon domain AM340_RS11580 PF10263 SprT-like family AM340_RS11585 PF00083 Sugar (and other) transporter AM340_RS11590 PF02772 S-adenosylmethionine synthetase, central domain AM340_RS11590 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM340_RS11590 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM340_RS11600 PF17430 Uncharacterized YqgC-like AM340_RS11605 PF11036 Virulence promoting factor AM340_RS11610 PF17810 Arginine decarboxylase helical bundle domain AM340_RS11610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM340_RS11610 PF17944 Arginine decarboxylase C-terminal helical extension AM340_RS11620 PF00491 Arginase family AM340_RS11625 PF01435 Peptidase family M48 AM340_RS11630 PF00456 Transketolase, thiamine diphosphate binding domain AM340_RS11630 PF02780 Transketolase, C-terminal domain AM340_RS11630 PF02779 Transketolase, pyrimidine binding domain AM340_RS11635 PF01145 SPFH domain / Band 7 family AM340_RS11645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS11650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS11650 PF02378 Phosphotransferase system, EIIC AM340_RS11655 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS11655 PF00107 Zinc-binding dehydrogenase AM340_RS11660 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM340_RS11665 PF05068 Mannitol repressor AM340_RS11675 PF00005 ABC transporter AM340_RS11680 PF00005 ABC transporter AM340_RS11700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM340_RS11700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM340_RS11705 PF00162 Phosphoglycerate kinase AM340_RS11710 PF01116 Fructose-bisphosphate aldolase class-II AM340_RS11715 PF05552 Conserved TM helix AM340_RS11715 PF00924 Mechanosensitive ion channel AM340_RS11720 PF01810 LysE type translocator AM340_RS11725 PF04402 Protein of unknown function (DUF541) AM340_RS11730 PF03466 LysR substrate binding domain AM340_RS11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS11735 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM340_RS11735 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM340_RS11740 PF00378 Enoyl-CoA hydratase/isomerase AM340_RS11750 PF02310 B12 binding domain AM340_RS11750 PF01642 Methylmalonyl-CoA mutase AM340_RS11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS11755 PF03466 LysR substrate binding domain AM340_RS11765 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM340_RS11770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM340_RS11770 PF01842 ACT domain AM340_RS11770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM340_RS11780 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM340_RS11790 PF05164 Cell division protein ZapA AM340_RS11795 PF03695 Uncharacterised protein family (UPF0149) AM340_RS11800 PF00557 Metallopeptidase family M24 AM340_RS11800 PF05195 Aminopeptidase P, N-terminal domain AM340_RS11805 PF01494 FAD binding domain AM340_RS11810 PF01494 FAD binding domain AM340_RS11815 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM340_RS11815 PF01571 Aminomethyltransferase folate-binding domain AM340_RS11820 PF01597 Glycine cleavage H-protein AM340_RS11825 PF02347 Glycine cleavage system P-protein AM340_RS11830 PF00232 Glycosyl hydrolase family 1 AM340_RS11835 PF04266 ASCH domain AM340_RS11840 PF03006 Haemolysin-III related AM340_RS11845 PF01571 Aminomethyltransferase folate-binding domain AM340_RS11850 PF03937 Flavinator of succinate dehydrogenase AM340_RS11855 PF07254 Membrane-bound toxin component of toxin-antitoxin system AM340_RS11860 PF00258 Flavodoxin AM340_RS11865 PF02899 Phage integrase, N-terminal SAM-like domain AM340_RS11865 PF00589 Phage integrase family AM340_RS11870 PF10411 Disulfide bond isomerase protein N-terminus AM340_RS11870 PF13098 Thioredoxin-like domain AM340_RS11875 PF01368 DHH family AM340_RS11875 PF02272 DHHA1 domain AM340_RS11875 PF17768 RecJ OB domain AM340_RS11885 PF00152 tRNA synthetases class II (D, K and N) AM340_RS11885 PF01336 OB-fold nucleic acid binding domain AM340_RS11890 PF00293 NUDIX domain AM340_RS11900 PF00860 Permease family AM340_RS11905 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS11905 PF13247 4Fe-4S dicluster domain AM340_RS11905 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM340_RS11910 PF13247 4Fe-4S dicluster domain AM340_RS11915 PF00860 Permease family AM340_RS11920 PF01979 Amidohydrolase family AM340_RS11925 PF00860 Permease family AM340_RS11930 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM340_RS11930 PF01799 [2Fe-2S] binding domain AM340_RS11930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM340_RS11935 PF00941 FAD binding domain in molybdopterin dehydrogenase AM340_RS11940 PF01979 Amidohydrolase family AM340_RS11945 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM340_RS11945 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS11950 PF12804 MobA-like NTP transferase domain AM340_RS11960 PF13478 XdhC Rossmann domain AM340_RS11960 PF02625 XdhC and CoxI family AM340_RS11965 PF00696 Amino acid kinase family AM340_RS11970 PF01979 Amidohydrolase family AM340_RS11975 PF01546 Peptidase family M20/M25/M40 AM340_RS11975 PF07687 Peptidase dimerisation domain AM340_RS11980 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS11985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM340_RS11985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM340_RS11990 PF13188 PAS domain AM340_RS11990 PF00158 Sigma-54 interaction domain AM340_RS11990 PF02954 Bacterial regulatory protein, Fis family AM340_RS11995 PF00111 2Fe-2S iron-sulfur cluster binding domain AM340_RS11995 PF01799 [2Fe-2S] binding domain AM340_RS12000 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM340_RS12000 PF00941 FAD binding domain in molybdopterin dehydrogenase AM340_RS12005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM340_RS12005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM340_RS12015 PF01476 LysM domain AM340_RS12015 PF01551 Peptidase family M23 AM340_RS12035 PF12833 Helix-turn-helix domain AM340_RS12040 PF00263 Bacterial type II and III secretion system protein AM340_RS12040 PF03958 Bacterial type II/III secretion system short domain AM340_RS12050 PF00771 FHIPEP family AM340_RS12055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM340_RS12055 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM340_RS12055 PF18269 T3SS EscN ATPase C-terminal domain AM340_RS12075 PF00108 Thiolase, N-terminal domain AM340_RS12075 PF02803 Thiolase, C-terminal domain AM340_RS12080 PF04962 KduI/IolB family AM340_RS12090 PF00083 Sugar (and other) transporter AM340_RS12095 PF01177 Asp/Glu/Hydantoin racemase AM340_RS12100 PF03466 LysR substrate binding domain AM340_RS12100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS12105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM340_RS12105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM340_RS12110 PF00356 Bacterial regulatory proteins, lacI family AM340_RS12115 PF01553 Acyltransferase AM340_RS12115 PF00501 AMP-binding enzyme AM340_RS12120 PF07690 Major Facilitator Superfamily AM340_RS12125 PF00248 Aldo/keto reductase family AM340_RS12130 PF01609 Transposase DDE domain AM340_RS12130 PF13006 Insertion element 4 transposase N-terminal AM340_RS12135 PF06004 Bacterial protein of unknown function (DUF903) AM340_RS12140 PF03741 Integral membrane protein TerC family AM340_RS12145 PF02976 DNA mismatch repair enzyme MutH AM340_RS12150 PF00293 NUDIX domain AM340_RS12155 PF05524 PEP-utilising enzyme, N-terminal AM340_RS12155 PF01590 GAF domain AM340_RS12155 PF00391 PEP-utilising enzyme, mobile domain AM340_RS12155 PF02896 PEP-utilising enzyme, TIM barrel domain AM340_RS12160 PF01790 Prolipoprotein diacylglyceryl transferase AM340_RS12165 PF00303 Thymidylate synthase AM340_RS12170 PF07963 Prokaryotic N-terminal methylation motif AM340_RS12175 PF07963 Prokaryotic N-terminal methylation motif AM340_RS12180 PF10713 Protein of unknown function (DUF2509) AM340_RS12185 PF12528 Type II secretion prepilin peptidase dependent protein C AM340_RS12185 PF07963 Prokaryotic N-terminal methylation motif AM340_RS12190 PF17946 RecC C-terminal domain AM340_RS12195 PF00675 Insulinase (Peptidase family M16) AM340_RS12195 PF05193 Peptidase M16 inactive domain AM340_RS12195 PF16187 Middle or third domain of peptidase_M16 AM340_RS12200 PF12705 PD-(D/E)XK nuclease superfamily AM340_RS12200 PF00580 UvrD/REP helicase N-terminal domain AM340_RS12200 PF13361 UvrD-like helicase C-terminal domain AM340_RS12205 PF13538 UvrD-like helicase C-terminal domain AM340_RS12210 PF00583 Acetyltransferase (GNAT) family AM340_RS12210 PF00696 Amino acid kinase family AM340_RS12215 PF11741 AMIN domain AM340_RS12215 PF01520 N-acetylmuramoyl-L-alanine amidase AM340_RS12240 PF06725 3D domain AM340_RS12240 PF03562 MltA specific insert domain AM340_RS12245 PF00899 ThiF family AM340_RS12250 PF02657 Fe-S metabolism associated domain AM340_RS12255 PF00266 Aminotransferase class-V AM340_RS12260 PF06004 Bacterial protein of unknown function (DUF903) AM340_RS12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS12265 PF03466 LysR substrate binding domain AM340_RS12270 PF04241 Protein of unknown function (DUF423) AM340_RS12275 PF01728 FtsJ-like methyltransferase AM340_RS12275 PF18125 RlmM ferredoxin-like domain AM340_RS12280 PF00455 DeoR C terminal sensor domain AM340_RS12280 PF08220 DeoR-like helix-turn-helix domain AM340_RS12285 PF05025 RbsD / FucU transport protein family AM340_RS12290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM340_RS12290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM340_RS12295 PF07882 L-fucose isomerase, second N-terminal domain AM340_RS12295 PF07881 L-fucose isomerase, first N-terminal domain AM340_RS12295 PF02952 L-fucose isomerase, C-terminal domain AM340_RS12300 PF07690 Major Facilitator Superfamily AM340_RS12305 PF00596 Class II Aldolase and Adducin N-terminal domain AM340_RS12310 PF00465 Iron-containing alcohol dehydrogenase AM340_RS12315 PF01367 5'-3' exonuclease, C-terminal SAM fold AM340_RS12315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM340_RS12320 PF03315 Serine dehydratase beta chain AM340_RS12320 PF03313 Serine dehydratase alpha chain AM340_RS12330 PF11892 Domain of unknown function (DUF3412) AM340_RS12330 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM340_RS12330 PF03641 Possible lysine decarboxylase AM340_RS12335 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM340_RS12335 PF14489 QueF-like protein AM340_RS12340 PF07348 Syd protein (SUKH-2) AM340_RS12345 PF04287 tRNA pseudouridine synthase C AM340_RS12350 PF00849 RNA pseudouridylate synthase AM340_RS12355 PF00258 Flavodoxin AM340_RS12360 PF07690 Major Facilitator Superfamily AM340_RS12365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM340_RS12365 PF13378 Enolase C-terminal domain-like AM340_RS12370 PF13378 Enolase C-terminal domain-like AM340_RS12375 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS12375 PF00672 HAMP domain AM340_RS12375 PF01627 Hpt domain AM340_RS12375 PF00072 Response regulator receiver domain AM340_RS12375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM340_RS12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS12380 PF05958 tRNA (Uracil-5-)-methyltransferase AM340_RS12380 PF01938 TRAM domain AM340_RS12385 PF13291 ACT domain AM340_RS12385 PF04607 Region found in RelA / SpoT proteins AM340_RS12385 PF02824 TGS domain AM340_RS12390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM340_RS12395 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM340_RS12400 PF03819 MazG nucleotide pyrophosphohydrolase domain AM340_RS12405 PF06418 CTP synthase N-terminus AM340_RS12405 PF00117 Glutamine amidotransferase class-I AM340_RS12410 PF03952 Enolase, N-terminal domain AM340_RS12410 PF00113 Enolase, C-terminal TIM barrel domain AM340_RS12415 PF13006 Insertion element 4 transposase N-terminal AM340_RS12415 PF01609 Transposase DDE domain AM340_RS12420 PF04536 TPM domain AM340_RS12435 PF04055 Radical SAM superfamily AM340_RS12440 PF00356 Bacterial regulatory proteins, lacI family AM340_RS12440 PF13407 Periplasmic binding protein domain AM340_RS12445 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM340_RS12445 PF08244 Glycosyl hydrolases family 32 C terminal AM340_RS12450 PF02378 Phosphotransferase system, EIIC AM340_RS12450 PF00367 phosphotransferase system, EIIB AM340_RS12455 PF02264 LamB porin AM340_RS12455 PF11471 Maltoporin periplasmic N-terminal extension AM340_RS12460 PF00294 pfkB family carbohydrate kinase AM340_RS12465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM340_RS12465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM340_RS12490 PF01565 FAD binding domain AM340_RS12490 PF02913 FAD linked oxidases, C-terminal domain AM340_RS12495 PF00083 Sugar (and other) transporter AM340_RS12500 PF01012 Electron transfer flavoprotein domain AM340_RS12505 PF01012 Electron transfer flavoprotein domain AM340_RS12505 PF00766 Electron transfer flavoprotein FAD-binding domain AM340_RS12510 PF04309 Glycerol-3-phosphate responsive antiterminator AM340_RS12520 PF01266 FAD dependent oxidoreductase AM340_RS12525 PF01242 6-pyruvoyl tetrahydropterin synthase AM340_RS12530 PF00667 FAD binding domain AM340_RS12530 PF00258 Flavodoxin AM340_RS12530 PF00175 Oxidoreductase NAD-binding domain AM340_RS12535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM340_RS12535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM340_RS12540 PF01507 Phosphoadenosine phosphosulfate reductase family AM340_RS12550 PF01848 Hok/gef family AM340_RS12555 PF04389 Peptidase family M28 AM340_RS12565 PF01507 Phosphoadenosine phosphosulfate reductase family AM340_RS12570 PF00009 Elongation factor Tu GTP binding domain AM340_RS12580 PF12084 Protein of unknown function (DUF3561) AM340_RS12585 PF04977 Septum formation initiator AM340_RS12590 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM340_RS12595 PF02542 YgbB family AM340_RS12600 PF01142 tRNA pseudouridine synthase D (TruD) AM340_RS12605 PF01975 Survival protein SurE AM340_RS12615 PF01551 Peptidase family M23 AM340_RS12615 PF01476 LysM domain AM340_RS12620 PF00140 Sigma-70 factor, region 1.2 AM340_RS12620 PF04539 Sigma-70 region 3 AM340_RS12620 PF04545 Sigma-70, region 4 AM340_RS12620 PF04542 Sigma-70 region 2 AM340_RS12625 PF01047 MarR family AM340_RS12630 PF02441 Flavoprotein AM340_RS12635 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM340_RS12645 PF00149 Calcineurin-like phosphoesterase AM340_RS12650 PF05188 MutS domain II AM340_RS12650 PF00488 MutS domain V AM340_RS12650 PF05190 MutS family domain IV AM340_RS12650 PF05192 MutS domain III AM340_RS12650 PF01624 MutS domain I AM340_RS12655 PF11756 Nitrous oxide-stimulated promoter AM340_RS12670 PF02769 AIR synthase related protein, C-terminal domain AM340_RS12670 PF00586 AIR synthase related protein, N-terminal domain AM340_RS12675 PF01924 Hydrogenase formation hypA family AM340_RS12680 PF01455 HupF/HypC family AM340_RS12685 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM340_RS12690 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM340_RS12695 PF11046 Transcriptional repressor of hyc and hyp operons AM340_RS12700 PF13247 4Fe-4S dicluster domain AM340_RS12705 PF00361 Proton-conducting membrane transporter AM340_RS12710 PF00146 NADH dehydrogenase AM340_RS12715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM340_RS12715 PF00374 Nickel-dependent hydrogenase AM340_RS12715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM340_RS12720 PF12838 4Fe-4S dicluster domain AM340_RS12725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM340_RS12730 PF07450 Formate hydrogenlyase maturation protein HycH AM340_RS12735 PF01750 Hydrogenase maturation protease AM340_RS12745 PF00232 Glycosyl hydrolase family 1 AM340_RS12750 PF00367 phosphotransferase system, EIIB AM340_RS12750 PF02378 Phosphotransferase system, EIIC AM340_RS12755 PF00356 Bacterial regulatory proteins, lacI family AM340_RS12760 PF12800 4Fe-4S binding domain AM340_RS12760 PF13247 4Fe-4S dicluster domain AM340_RS12765 PF17788 HypF Kae1-like domain AM340_RS12765 PF07503 HypF finger AM340_RS12765 PF00708 Acylphosphatase AM340_RS12765 PF01300 Telomere recombination AM340_RS12770 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS12770 PF18113 Rubredoxin binding C-terminal domain AM340_RS12775 PF00753 Metallo-beta-lactamase superfamily AM340_RS12775 PF00301 Rubredoxin AM340_RS12775 PF00258 Flavodoxin AM340_RS12780 PF00158 Sigma-54 interaction domain AM340_RS12780 PF01590 GAF domain AM340_RS12785 PF00571 CBS domain AM340_RS12785 PF01380 SIS domain AM340_RS12790 PF00455 DeoR C terminal sensor domain AM340_RS12790 PF08220 DeoR-like helix-turn-helix domain AM340_RS12795 PF06923 Glucitol operon activator protein (GutM) AM340_RS12800 PF00106 short chain dehydrogenase AM340_RS12805 PF03829 PTS system glucitol/sorbitol-specific IIA component AM340_RS12810 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AM340_RS12810 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AM340_RS12815 PF03608 PTS system enzyme II sorbitol-specific factor AM340_RS12820 PF13406 Transglycosylase SLT domain AM340_RS12825 PF02464 Competence-damaged protein AM340_RS12830 PF00154 recA bacterial DNA recombination protein AM340_RS12835 PF02631 RecX family AM340_RS12840 PF01411 tRNA synthetases class II (A) AM340_RS12840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM340_RS12840 PF02272 DHHA1 domain AM340_RS12845 PF02599 Global regulator protein family AM340_RS12875 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS12880 PF09335 SNARE associated Golgi protein AM340_RS12885 PF04262 Glutamate-cysteine ligase AM340_RS12890 PF02664 S-Ribosylhomocysteinase (LuxS) AM340_RS12895 PF07690 Major Facilitator Superfamily AM340_RS12900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS12900 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS12905 PF01609 Transposase DDE domain AM340_RS12905 PF13006 Insertion element 4 transposase N-terminal AM340_RS12910 PF01047 MarR family AM340_RS12915 PF05437 Branched-chain amino acid transport protein (AzlD) AM340_RS12920 PF03591 AzlC protein AM340_RS12925 PF07690 Major Facilitator Superfamily AM340_RS12930 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM340_RS12935 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS12940 PF00571 CBS domain AM340_RS12940 PF00005 ABC transporter AM340_RS12950 PF00268 Ribonucleotide reductase, small chain AM340_RS12955 PF02867 Ribonucleotide reductase, barrel domain AM340_RS12955 PF00317 Ribonucleotide reductase, all-alpha domain AM340_RS12955 PF08343 Ribonucleotide reductase N-terminal AM340_RS12960 PF07972 NrdI Flavodoxin like AM340_RS12965 PF00462 Glutaredoxin AM340_RS12975 PF02627 Carboxymuconolactone decarboxylase family AM340_RS12980 PF00155 Aminotransferase class I and II AM340_RS12980 PF00392 Bacterial regulatory proteins, gntR family AM340_RS12985 PF05957 Bacterial protein of unknown function (DUF883) AM340_RS12990 PF09400 Protein of unknown function (DUF2002) AM340_RS12995 PF06610 L-alanine exporter AM340_RS13000 PF00816 H-NS histone family AM340_RS13005 PF11127 Protein of unknown function (DUF2892) AM340_RS13005 PF00581 Rhodanese-like domain AM340_RS13010 PF01022 Bacterial regulatory protein, arsR family AM340_RS13015 PF01679 Proteolipid membrane potential modulator AM340_RS13020 PF04972 BON domain AM340_RS13020 PF01476 LysM domain AM340_RS13025 PF00392 Bacterial regulatory proteins, gntR family AM340_RS13025 PF07729 FCD domain AM340_RS13030 PF00324 Amino acid permease AM340_RS13035 PF00202 Aminotransferase class-III AM340_RS13040 PF00171 Aldehyde dehydrogenase family AM340_RS13045 PF01266 FAD dependent oxidoreductase AM340_RS13050 PF08943 CsiD AM340_RS13055 PF00128 Alpha amylase, catalytic domain AM340_RS13065 PF17612 Family of unknown function (DUF5507) AM340_RS13095 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS13110 PF07157 DNA circularisation protein N-terminus AM340_RS13130 PF04865 Baseplate J-like protein AM340_RS13135 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) AM340_RS13150 PF01757 Acyltransferase family AM340_RS13165 PF18284 DNA methylase N-terminal domain AM340_RS13165 PF00145 C-5 cytosine-specific DNA methylase AM340_RS13170 PF09217 Restriction endonuclease EcoRII, N-terminal AM340_RS13170 PF09019 EcoRII C terminal AM340_RS13190 PF17345 Family of unknown function (DUF5375) AM340_RS13235 PF00589 Phage integrase family AM340_RS13235 PF13356 Arm DNA-binding domain AM340_RS13245 PF01668 SmpB protein AM340_RS13250 PF03364 Polyketide cyclase / dehydrase and lipid transport AM340_RS13255 PF03658 RnfH family Ubiquitin AM340_RS13260 PF04355 SmpA / OmlA family AM340_RS13265 PF02463 RecF/RecN/SMC N terminal domain AM340_RS13270 PF01513 ATP-NAD kinase AM340_RS13280 PF01025 GrpE AM340_RS13285 PF01595 Cyclin M transmembrane N-terminal domain AM340_RS13285 PF03471 Transporter associated domain AM340_RS13285 PF00571 CBS domain AM340_RS13290 PF01578 Cytochrome C assembly protein AM340_RS13295 PF00448 SRP54-type protein, GTPase domain AM340_RS13295 PF02881 SRP54-type protein, helical bundle domain AM340_RS13295 PF02978 Signal peptide binding domain AM340_RS13300 PF00886 Ribosomal protein S16 AM340_RS13305 PF01782 RimM N-terminal domain AM340_RS13305 PF05239 PRC-barrel domain AM340_RS13310 PF01746 tRNA (Guanine-1)-methyltransferase AM340_RS13315 PF01245 Ribosomal protein L19 AM340_RS13320 PF00691 OmpA family AM340_RS13325 PF17152 Periplasmic sensor domain AM340_RS13325 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS13330 PF13689 YfiR/HmsC-like AM340_RS13335 PF10973 Protein of unknown function (DUF2799) AM340_RS13340 PF00793 DAHP synthetase I family AM340_RS13345 PF01817 Chorismate mutase type II AM340_RS13345 PF02153 Prephenate dehydrogenase AM340_RS13350 PF00800 Prephenate dehydratase AM340_RS13350 PF01817 Chorismate mutase type II AM340_RS13360 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM340_RS13370 PF13006 Insertion element 4 transposase N-terminal AM340_RS13370 PF01609 Transposase DDE domain AM340_RS13375 PF13525 Outer membrane lipoprotein AM340_RS13380 PF00849 RNA pseudouridylate synthase AM340_RS13380 PF01479 S4 domain AM340_RS13385 PF02578 Multi-copper polyphenol oxidoreductase laccase AM340_RS13390 PF00004 ATPase family associated with various cellular activities (AAA) AM340_RS13390 PF17871 AAA lid domain AM340_RS13390 PF02861 Clp amino terminal domain, pathogenicity island component AM340_RS13390 PF07724 AAA domain (Cdc48 subfamily) AM340_RS13390 PF10431 C-terminal, D2-small domain, of ClpB protein AM340_RS13415 PF00083 Sugar (and other) transporter AM340_RS13420 PF10043 Predicted periplasmic lipoprotein (DUF2279) AM340_RS13425 PF13091 PLD-like domain AM340_RS13430 PF13607 Succinyl-CoA ligase like flavodoxin domain AM340_RS13430 PF13380 CoA binding domain AM340_RS13430 PF00583 Acetyltransferase (GNAT) family AM340_RS13435 PF03942 DTW domain AM340_RS13440 PF00085 Thioredoxin AM340_RS13450 PF00588 SpoU rRNA Methylase family AM340_RS13450 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM340_RS13455 PF03167 Uracil DNA glycosylase superfamily AM340_RS13460 PF01228 Glycine radical AM340_RS13465 PF01810 LysE type translocator AM340_RS13485 PF00271 Helicase conserved C-terminal domain AM340_RS13485 PF00270 DEAD/DEAH box helicase AM340_RS13490 PF05175 Methyltransferase small domain AM340_RS13495 PF00890 FAD binding domain AM340_RS13495 PF02910 Fumarate reductase flavoprotein C-term AM340_RS13500 PF08281 Sigma-70, region 4 AM340_RS13500 PF04542 Sigma-70 region 2 AM340_RS13505 PF03872 Anti sigma-E protein RseA, N-terminal domain AM340_RS13505 PF03873 Anti sigma-E protein RseA, C-terminal domain AM340_RS13510 PF17188 MucB/RseB C-terminal domain AM340_RS13510 PF03888 MucB/RseB N-terminal domain AM340_RS13520 PF06421 GTP-binding protein LepA C-terminus AM340_RS13520 PF00009 Elongation factor Tu GTP binding domain AM340_RS13520 PF00679 Elongation factor G C-terminus AM340_RS13520 PF03144 Elongation factor Tu domain 2 AM340_RS13525 PF10502 Signal peptidase, peptidase S26 AM340_RS13535 PF14622 Ribonuclease-III-like AM340_RS13535 PF00035 Double-stranded RNA binding motif AM340_RS13540 PF07650 KH domain AM340_RS13540 PF01926 50S ribosome-binding GTPase AM340_RS13545 PF11967 Recombination protein O N terminal AM340_RS13545 PF02565 Recombination protein O C terminal AM340_RS13550 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM340_RS13555 PF01648 4'-phosphopantetheinyl transferase superfamily AM340_RS13570 PF12838 4Fe-4S dicluster domain AM340_RS13575 PF01380 SIS domain AM340_RS13575 PF01418 Helix-turn-helix domain, rpiR family AM340_RS13585 PF14437 MafB19-like deaminase AM340_RS13590 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS13590 PF01464 Transglycosylase SLT domain AM340_RS13595 PF02769 AIR synthase related protein, C-terminal domain AM340_RS13595 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM340_RS13595 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM340_RS13600 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS13600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS13605 PF13942 YfhG lipoprotein AM340_RS13610 PF00072 Response regulator receiver domain AM340_RS13610 PF00158 Sigma-54 interaction domain AM340_RS13615 PF00543 Nitrogen regulatory protein P-II AM340_RS13620 PF00042 Globin AM340_RS13620 PF00175 Oxidoreductase NAD-binding domain AM340_RS13620 PF00970 Oxidoreductase FAD-binding domain AM340_RS13625 PF00464 Serine hydroxymethyltransferase AM340_RS13630 PF00480 ROK family AM340_RS13635 PF13181 Tetratricopeptide repeat AM340_RS13635 PF17128 Domain of unknown function (DUF5107) AM340_RS13640 PF13407 Periplasmic binding protein domain AM340_RS13645 PF00005 ABC transporter AM340_RS13650 PF02653 Branched-chain amino acid transport system / permease component AM340_RS13655 PF00107 Zinc-binding dehydrogenase AM340_RS13655 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS13660 PF01263 Aldose 1-epimerase AM340_RS13665 PF07681 DoxX AM340_RS13670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS13670 PF14759 Reductase C-terminal AM340_RS13675 PF00106 short chain dehydrogenase AM340_RS13680 PF00355 Rieske [2Fe-2S] domain AM340_RS13685 PF00866 Ring hydroxylating beta subunit AM340_RS13690 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM340_RS13690 PF00355 Rieske [2Fe-2S] domain AM340_RS13695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS13695 PF03466 LysR substrate binding domain AM340_RS13700 PF12832 MFS_1 like family AM340_RS13705 PF00874 PRD domain AM340_RS13710 PF12146 Serine aminopeptidase, S33 AM340_RS13715 PF00459 Inositol monophosphatase family AM340_RS13720 PF00588 SpoU rRNA Methylase family AM340_RS13725 PF02082 Transcriptional regulator AM340_RS13730 PF00266 Aminotransferase class-V AM340_RS13735 PF01592 NifU-like N terminal domain AM340_RS13740 PF01521 Iron-sulphur cluster biosynthesis AM340_RS13745 PF07743 HSCB C-terminal oligomerisation domain AM340_RS13750 PF00012 Hsp70 protein AM340_RS13755 PF00111 2Fe-2S iron-sulfur cluster binding domain AM340_RS13760 PF04384 Iron-sulphur cluster assembly AM340_RS13765 PF12404 Peptidase AM340_RS13765 PF00883 Cytosol aminopeptidase family, catalytic domain AM340_RS13770 PF14581 SseB protein C-terminal domain AM340_RS13770 PF07179 SseB protein N-terminal domain AM340_RS13780 PF00581 Rhodanese-like domain AM340_RS13785 PF01835 MG2 domain AM340_RS13785 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AM340_RS13785 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AM340_RS13785 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AM340_RS13785 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AM340_RS13785 PF00207 Alpha-2-macroglobulin family AM340_RS13785 PF07678 A-macroglobulin TED domain AM340_RS13785 PF07703 Alpha-2-macroglobulin bait region domain AM340_RS13785 PF17962 Bacterial macroglobulin domain 6 AM340_RS13790 PF00905 Penicillin binding protein transpeptidase domain AM340_RS13790 PF00912 Transglycosylase AM340_RS13790 PF06832 Penicillin-Binding Protein C-terminus Family AM340_RS13795 PF00334 Nucleoside diphosphate kinase AM340_RS13800 PF04055 Radical SAM superfamily AM340_RS13810 PF13464 Domain of unknown function (DUF4115) AM340_RS13815 PF04551 GcpE protein AM340_RS13820 PF03129 Anticodon binding domain AM340_RS13820 PF13393 Histidyl-tRNA synthetase AM340_RS13825 PF09976 Tetratricopeptide repeat-like domain AM340_RS13830 PF13360 PQQ-like domain AM340_RS13835 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM340_RS13835 PF01926 50S ribosome-binding GTPase AM340_RS13840 PF07191 zinc-ribbons AM340_RS13845 PF11924 Inverse autotransporter, beta-domain AM340_RS13845 PF02369 Bacterial Ig-like domain (group 1) AM340_RS13845 PF09134 Invasin, domain 3 AM340_RS13845 PF07979 Intimin C-type lectin domain AM340_RS13860 PF13742 OB-fold nucleic acid binding domain AM340_RS13860 PF02601 Exonuclease VII, large subunit AM340_RS13865 PF00478 IMP dehydrogenase / GMP reductase domain AM340_RS13865 PF00571 CBS domain AM340_RS13870 PF00117 Glutamine amidotransferase class-I AM340_RS13870 PF00958 GMP synthase C terminal domain AM340_RS13870 PF02540 NAD synthase AM340_RS13880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS13895 PF17358 Family of unknown function (DUF5384) AM340_RS13900 PF05433 Glycine zipper 2TM domain AM340_RS13905 PF11119 Protein of unknown function (DUF2633) AM340_RS13920 PF02541 Ppx/GppA phosphatase family AM340_RS13925 PF17941 Polyphosphate kinase C-terminal domain 1 AM340_RS13925 PF13089 Polyphosphate kinase N-terminal domain AM340_RS13925 PF02503 Polyphosphate kinase middle domain AM340_RS13925 PF13090 Polyphosphate kinase C-terminal domain 2 AM340_RS13930 PF00551 Formyl transferase AM340_RS13935 PF00586 AIR synthase related protein, N-terminal domain AM340_RS13935 PF02769 AIR synthase related protein, C-terminal domain AM340_RS13950 PF00860 Permease family AM340_RS13955 PF00308 Bacterial dnaA protein AM340_RS13960 PF03960 ArsC family AM340_RS13965 PF01435 Peptidase family M48 AM340_RS13970 PF01594 AI-2E family transporter AM340_RS13975 PF01226 Formate/nitrite transporter AM340_RS13985 PF07450 Formate hydrogenlyase maturation protein HycH AM340_RS13990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM340_RS13995 PF12838 4Fe-4S dicluster domain AM340_RS14000 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM340_RS14000 PF00374 Nickel-dependent hydrogenase AM340_RS14000 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM340_RS14005 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM340_RS14005 PF00361 Proton-conducting membrane transporter AM340_RS14010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM340_RS14015 PF00361 Proton-conducting membrane transporter AM340_RS14015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM340_RS14020 PF00146 NADH dehydrogenase AM340_RS14025 PF00361 Proton-conducting membrane transporter AM340_RS14030 PF00037 4Fe-4S binding domain AM340_RS14030 PF12798 4Fe-4S binding domain AM340_RS14035 PF00578 AhpC/TSA family AM340_RS14040 PF01842 ACT domain AM340_RS14045 PF00701 Dihydrodipicolinate synthetase family AM340_RS14050 PF06804 NlpB/DapX lipoprotein AM340_RS14055 PF01259 SAICAR synthetase AM340_RS14060 PF04228 Putative neutral zinc metallopeptidase AM340_RS14065 PF05127 Helicase AM340_RS14065 PF13718 GNAT acetyltransferase 2 AM340_RS14065 PF08351 Domain of unknown function (DUF1726) AM340_RS14065 PF17176 tRNA-binding domain AM340_RS14070 PF02230 Phospholipase/Carboxylesterase AM340_RS14075 PF13980 Uncharacterised protein family (UPF0370) AM340_RS14080 PF01546 Peptidase family M20/M25/M40 AM340_RS14080 PF07687 Peptidase dimerisation domain AM340_RS14085 PF03960 ArsC family AM340_RS14095 PF00873 AcrB/AcrD/AcrF family AM340_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS14100 PF07730 Histidine kinase AM340_RS14100 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM340_RS14100 PF00672 HAMP domain AM340_RS14105 PF13247 4Fe-4S dicluster domain AM340_RS14105 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS14105 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM340_RS14110 PF00293 NUDIX domain AM340_RS14115 PF06674 Protein of unknown function (DUF1176) AM340_RS14120 PF02780 Transketolase, C-terminal domain AM340_RS14120 PF00456 Transketolase, thiamine diphosphate binding domain AM340_RS14120 PF02779 Transketolase, pyrimidine binding domain AM340_RS14125 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM340_RS14130 PF00390 Malic enzyme, N-terminal domain AM340_RS14130 PF03949 Malic enzyme, NAD binding domain AM340_RS14130 PF01515 Phosphate acetyl/butaryl transferase AM340_RS14135 PF00936 BMC domain AM340_RS14140 PF10662 Ethanolamine utilisation - propanediol utilisation AM340_RS14145 PF06249 Ethanolamine utilisation protein EutQ AM340_RS14150 PF01923 Cobalamin adenosyltransferase AM340_RS14155 PF01515 Phosphate acetyl/butaryl transferase AM340_RS14160 PF00936 BMC domain AM340_RS14165 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM340_RS14170 PF00171 Aldehyde dehydrogenase family AM340_RS14180 PF00465 Iron-containing alcohol dehydrogenase AM340_RS14185 PF04346 Ethanolamine utilisation protein, EutH AM340_RS14190 PF06277 Ethanolamine utilisation protein EutA AM340_RS14200 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM340_RS14205 PF00936 BMC domain AM340_RS14210 PF00936 BMC domain AM340_RS14210 PF16365 Ethanolamine utilization protein EutK C-terminus AM340_RS14215 PF12833 Helix-turn-helix domain AM340_RS14220 PF01218 Coproporphyrinogen III oxidase AM340_RS14225 PF01520 N-acetylmuramoyl-L-alanine amidase AM340_RS14230 PF00583 Acetyltransferase (GNAT) family AM340_RS14235 PF11143 Protein of unknown function (DUF2919) AM340_RS14240 PF06572 Protein of unknown function (DUF1131) AM340_RS14245 PF04261 Dyp-type peroxidase family AM340_RS14250 PF00144 Beta-lactamase AM340_RS14255 PF00367 phosphotransferase system, EIIB AM340_RS14255 PF02378 Phosphotransferase system, EIIC AM340_RS14260 PF01380 SIS domain AM340_RS14265 PF01418 Helix-turn-helix domain, rpiR family AM340_RS14265 PF01380 SIS domain AM340_RS14280 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS14285 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS14290 PF00005 ABC transporter AM340_RS14295 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS14300 PF17263 Family of unknown function (DUF5329) AM340_RS14305 PF08543 Phosphomethylpyrimidine kinase AM340_RS14310 PF13006 Insertion element 4 transposase N-terminal AM340_RS14310 PF01609 Transposase DDE domain AM340_RS14315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM340_RS14320 PF05524 PEP-utilising enzyme, N-terminal AM340_RS14320 PF00391 PEP-utilising enzyme, mobile domain AM340_RS14320 PF02896 PEP-utilising enzyme, TIM barrel domain AM340_RS14325 PF00381 PTS HPr component phosphorylation site AM340_RS14330 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS14340 PF04354 ZipA, C-terminal FtsZ-binding domain AM340_RS14345 PF01653 NAD-dependent DNA ligase adenylation domain AM340_RS14345 PF00533 BRCA1 C Terminus (BRCT) domain AM340_RS14345 PF03120 NAD-dependent DNA ligase OB-fold domain AM340_RS14345 PF12826 Helix-hairpin-helix motif AM340_RS14345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM340_RS14350 PF12843 Putative quorum-sensing-regulated virulence factor AM340_RS14355 PF13593 SBF-like CPA transporter family (DUF4137) AM340_RS14360 PF03502 Nucleoside-specific channel-forming protein, Tsx AM340_RS14365 PF03825 Nucleoside H+ symporter AM340_RS14375 PF01048 Phosphorylase superfamily AM340_RS14380 PF03825 Nucleoside H+ symporter AM340_RS14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS14385 PF03466 LysR substrate binding domain AM340_RS14410 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM340_RS14425 PF01385 Probable transposase AM340_RS14425 PF07282 Putative transposase DNA-binding domain AM340_RS14425 PF12323 Helix-turn-helix domain AM340_RS14430 PF07037 Putative transcription regulator (DUF1323) AM340_RS14435 PF07037 Putative transcription regulator (DUF1323) AM340_RS14450 PF05231 MASE1 AM340_RS14450 PF00563 EAL domain AM340_RS14455 PF13006 Insertion element 4 transposase N-terminal AM340_RS14455 PF01609 Transposase DDE domain AM340_RS14460 PF07662 Na+ dependent nucleoside transporter C-terminus AM340_RS14460 PF01773 Na+ dependent nucleoside transporter N-terminus AM340_RS14460 PF07670 Nucleoside recognition AM340_RS14465 PF01566 Natural resistance-associated macrophage protein AM340_RS14470 PF10697 Protein of unknown function (DUF2502) AM340_RS14475 PF00654 Voltage gated chloride channel AM340_RS14480 PF02685 Glucokinase AM340_RS14485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS14490 PF02378 Phosphotransferase system, EIIC AM340_RS14495 PF00557 Metallopeptidase family M24 AM340_RS14495 PF01321 Creatinase/Prolidase N-terminal domain AM340_RS14500 PF05343 M42 glutamyl aminopeptidase AM340_RS14505 PF00381 PTS HPr component phosphorylation site AM340_RS14505 PF05524 PEP-utilising enzyme, N-terminal AM340_RS14505 PF00391 PEP-utilising enzyme, mobile domain AM340_RS14505 PF02896 PEP-utilising enzyme, TIM barrel domain AM340_RS14505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS14510 PF05524 PEP-utilising enzyme, N-terminal AM340_RS14510 PF02896 PEP-utilising enzyme, TIM barrel domain AM340_RS14510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS14510 PF00381 PTS HPr component phosphorylation site AM340_RS14510 PF00391 PEP-utilising enzyme, mobile domain AM340_RS14515 PF12833 Helix-turn-helix domain AM340_RS14520 PF04397 LytTr DNA-binding domain AM340_RS14520 PF00072 Response regulator receiver domain AM340_RS14525 PF07694 5TMR of 5TMR-LYT AM340_RS14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS14525 PF06580 Histidine kinase AM340_RS14530 PF00155 Aminotransferase class I and II AM340_RS14540 PF03279 Bacterial lipid A biosynthesis acyltransferase AM340_RS14550 PF10810 Protein of unknown function (DUF2545) AM340_RS14560 PF10938 YfdX protein AM340_RS14565 PF02515 CoA-transferase family III AM340_RS14570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM340_RS14570 PF00205 Thiamine pyrophosphate enzyme, central domain AM340_RS14570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM340_RS14575 PF03547 Membrane transport protein AM340_RS14580 PF02515 CoA-transferase family III AM340_RS14585 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS14585 PF00072 Response regulator receiver domain AM340_RS14585 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS14590 PF00072 Response regulator receiver domain AM340_RS14590 PF00196 Bacterial regulatory proteins, luxR family AM340_RS14595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS14595 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS14600 PF07690 Major Facilitator Superfamily AM340_RS14605 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS14610 PF02447 GntP family permease AM340_RS14615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS14615 PF03466 LysR substrate binding domain AM340_RS14620 PF00589 Phage integrase family AM340_RS14625 PF00589 Phage integrase family AM340_RS14645 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS14660 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS14665 PF14659 Phage integrase, N-terminal SAM-like domain AM340_RS14665 PF00589 Phage integrase family AM340_RS14665 PF13356 Arm DNA-binding domain AM340_RS14675 PF01226 Formate/nitrite transporter AM340_RS14685 PF04333 MlaA lipoprotein AM340_RS14695 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM340_RS14700 PF04175 Protein of unknown function (DUF406) AM340_RS14705 PF00108 Thiolase, N-terminal domain AM340_RS14705 PF02803 Thiolase, C-terminal domain AM340_RS14710 PF00378 Enoyl-CoA hydratase/isomerase AM340_RS14710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM340_RS14710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM340_RS14715 PF00300 Histidine phosphatase superfamily (branch 1) AM340_RS14720 PF00419 Fimbrial protein AM340_RS14725 PF00577 Outer membrane usher protein AM340_RS14725 PF13954 PapC N-terminal domain AM340_RS14725 PF13953 PapC C-terminal domain AM340_RS14730 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS14730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS14735 PF00419 Fimbrial protein AM340_RS14740 PF00419 Fimbrial protein AM340_RS14745 PF00419 Fimbrial protein AM340_RS14750 PF11245 Protein of unknown function (DUF2544) AM340_RS14765 PF01713 Smr domain AM340_RS14770 PF05175 Methyltransferase small domain AM340_RS14775 PF01264 Chorismate synthase AM340_RS14780 PF03411 Penicillin-insensitive murein endopeptidase AM340_RS14785 PF01925 Sulfite exporter TauE/SafE AM340_RS14790 PF04315 Elongation factor P hydroxylase AM340_RS14795 PF08891 YfcL protein AM340_RS14800 PF01266 FAD dependent oxidoreductase AM340_RS14800 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM340_RS14805 PF02801 Beta-ketoacyl synthase, C-terminal domain AM340_RS14805 PF00109 Beta-ketoacyl synthase, N-terminal domain AM340_RS14815 PF07690 Major Facilitator Superfamily AM340_RS14825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM340_RS14825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM340_RS14825 PF11890 Domain of unknown function (DUF3410) AM340_RS14830 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM340_RS14830 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM340_RS14835 PF01416 tRNA pseudouridine synthase AM340_RS14840 PF09335 SNARE associated Golgi protein AM340_RS14845 PF01039 Carboxyl transferase domain AM340_RS14845 PF17848 Acetyl-coA carboxylase zinc finger domain AM340_RS14850 PF02875 Mur ligase family, glutamate ligase domain AM340_RS14850 PF08245 Mur ligase middle domain AM340_RS14855 PF05036 Sporulation related domain AM340_RS14860 PF02674 Colicin V production protein AM340_RS14865 PF00156 Phosphoribosyl transferase domain AM340_RS14870 PF02441 Flavoprotein AM340_RS14875 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS14880 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS14885 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS14890 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS14895 PF00005 ABC transporter AM340_RS14900 PF04754 Putative transposase, YhgA-like AM340_RS14905 PF01053 Cys/Met metabolism PLP-dependent enzyme AM340_RS14910 PF03553 Na+/H+ antiporter family AM340_RS14915 PF08338 Domain of unknown function (DUF1731) AM340_RS14915 PF01370 NAD dependent epimerase/dehydratase family AM340_RS14920 PF02152 Dihydroneopterin aldolase AM340_RS14925 PF02798 Glutathione S-transferase, N-terminal domain AM340_RS14925 PF00043 Glutathione S-transferase, C-terminal domain AM340_RS14930 PF02798 Glutathione S-transferase, N-terminal domain AM340_RS14930 PF14834 Glutathione S-transferase, C-terminal domain AM340_RS14935 PF12850 Calcineurin-like phosphoesterase superfamily domain AM340_RS14940 PF00293 NUDIX domain AM340_RS14945 PF03606 C4-dicarboxylate anaerobic carrier AM340_RS14950 PF07085 DRTGG domain AM340_RS14950 PF01515 Phosphate acetyl/butaryl transferase AM340_RS14955 PF00871 Acetokinase family AM340_RS14960 PF04217 Protein of unknown function, DUF412 AM340_RS14965 PF03887 YfbU domain AM340_RS14970 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS14975 PF03600 Citrate transporter AM340_RS14975 PF02080 TrkA-C domain AM340_RS14985 PF00155 Aminotransferase class I and II AM340_RS14995 PF03466 LysR substrate binding domain AM340_RS14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS15005 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM340_RS15010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM340_RS15015 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM340_RS15015 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM340_RS15025 PF10531 SLBB domain AM340_RS15025 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM340_RS15025 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM340_RS15030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM340_RS15030 PF01568 Molydopterin dinucleotide binding domain AM340_RS15030 PF00384 Molybdopterin oxidoreductase AM340_RS15030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM340_RS15035 PF00146 NADH dehydrogenase AM340_RS15040 PF12838 4Fe-4S dicluster domain AM340_RS15045 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM340_RS15050 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM340_RS15055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM340_RS15055 PF00361 Proton-conducting membrane transporter AM340_RS15060 PF00361 Proton-conducting membrane transporter AM340_RS15065 PF00361 Proton-conducting membrane transporter AM340_RS15070 PF08974 Domain of unknown function (DUF1877) AM340_RS15075 PF04389 Peptidase family M28 AM340_RS15080 PF12034 Domain of unknown function (DUF3520) AM340_RS15080 PF00092 von Willebrand factor type A domain AM340_RS15080 PF12450 von Willebrand factor AM340_RS15085 PF02902 Ulp1 protease family, C-terminal catalytic domain AM340_RS15090 PF12706 Beta-lactamase superfamily domain AM340_RS15095 PF13673 Acetyltransferase (GNAT) domain AM340_RS15100 PF05957 Bacterial protein of unknown function (DUF883) AM340_RS15105 PF00425 chorismate binding enzyme AM340_RS15110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM340_RS15110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM340_RS15110 PF16582 Middle domain of thiamine pyrophosphate AM340_RS15115 PF12697 Alpha/beta hydrolase family AM340_RS15120 PF00378 Enoyl-CoA hydratase/isomerase AM340_RS15125 PF13378 Enolase C-terminal domain-like AM340_RS15130 PF13193 AMP-binding enzyme C-terminal domain AM340_RS15130 PF00501 AMP-binding enzyme AM340_RS15145 PF00892 EamA-like transporter family AM340_RS15150 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM340_RS15155 PF01522 Polysaccharide deacetylase AM340_RS15160 PF02911 Formyl transferase, C-terminal domain AM340_RS15160 PF01370 NAD dependent epimerase/dehydratase family AM340_RS15160 PF00551 Formyl transferase AM340_RS15165 PF00535 Glycosyl transferase family 2 AM340_RS15170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM340_RS15175 PF00300 Histidine phosphatase superfamily (branch 1) AM340_RS15180 PF00293 NUDIX domain AM340_RS15185 PF07437 YfaZ precursor AM340_RS15190 PF00994 Probable molybdopterin binding domain AM340_RS15195 PF01614 Bacterial transcriptional regulator AM340_RS15195 PF09339 IclR helix-turn-helix domain AM340_RS15200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM340_RS15200 PF13378 Enolase C-terminal domain-like AM340_RS15205 PF13006 Insertion element 4 transposase N-terminal AM340_RS15205 PF01609 Transposase DDE domain AM340_RS15220 PF07690 Major Facilitator Superfamily AM340_RS15225 PF03328 HpcH/HpaI aldolase/citrate lyase family AM340_RS15235 PF04754 Putative transposase, YhgA-like AM340_RS15240 PF13183 4Fe-4S dicluster domain AM340_RS15240 PF02754 Cysteine-rich domain AM340_RS15245 PF00890 FAD binding domain AM340_RS15250 PF01266 FAD dependent oxidoreductase AM340_RS15250 PF04324 BFD-like [2Fe-2S] binding domain AM340_RS15255 PF07690 Major Facilitator Superfamily AM340_RS15260 PF03009 Glycerophosphoryl diester phosphodiesterase family AM340_RS15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS15265 PF03466 LysR substrate binding domain AM340_RS15270 PF07690 Major Facilitator Superfamily AM340_RS15280 PF00111 2Fe-2S iron-sulfur cluster binding domain AM340_RS15285 PF00268 Ribonucleotide reductase, small chain AM340_RS15290 PF02867 Ribonucleotide reductase, barrel domain AM340_RS15290 PF00317 Ribonucleotide reductase, all-alpha domain AM340_RS15290 PF03477 ATP cone domain AM340_RS15300 PF12951 Passenger-associated-transport-repeat AM340_RS15300 PF03797 Autotransporter beta-domain AM340_RS15300 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat AM340_RS15310 PF07729 FCD domain AM340_RS15310 PF00392 Bacterial regulatory proteins, gntR family AM340_RS15315 PF07690 Major Facilitator Superfamily AM340_RS15320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM340_RS15320 PF13378 Enolase C-terminal domain-like AM340_RS15325 PF03989 DNA gyrase C-terminal domain, beta-propeller AM340_RS15325 PF00521 DNA gyrase/topoisomerase IV, subunit A AM340_RS15330 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) AM340_RS15335 PF06672 Protein of unknown function (DUF1175) AM340_RS15345 PF08486 Stage II sporulation protein AM340_RS15345 PF10062 Predicted secreted protein (DUF2300) AM340_RS15350 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) AM340_RS15355 PF02803 Thiolase, C-terminal domain AM340_RS15355 PF00108 Thiolase, N-terminal domain AM340_RS15360 PF02667 Short chain fatty acid transporter AM340_RS15365 PF01144 Coenzyme A transferase AM340_RS15370 PF01144 Coenzyme A transferase AM340_RS15375 PF00158 Sigma-54 interaction domain AM340_RS15375 PF00072 Response regulator receiver domain AM340_RS15375 PF02954 Bacterial regulatory protein, Fis family AM340_RS15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS15380 PF00989 PAS fold AM340_RS15380 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS15385 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS15385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS15385 PF00072 Response regulator receiver domain AM340_RS15385 PF09456 RcsC Alpha-Beta-Loop (ABL) AM340_RS15390 PF00072 Response regulator receiver domain AM340_RS15390 PF00196 Bacterial regulatory proteins, luxR family AM340_RS15395 PF01627 Hpt domain AM340_RS15395 PF16359 RcsD-ABL domain AM340_RS15395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS15405 PF00267 Gram-negative porin AM340_RS15410 PF02424 ApbE family AM340_RS15415 PF02805 Metal binding domain of Ada AM340_RS15415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM340_RS15415 PF12833 Helix-turn-helix domain AM340_RS15415 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM340_RS15420 PF13532 2OG-Fe(II) oxygenase superfamily AM340_RS15425 PF00005 ABC transporter AM340_RS15430 PF06039 Malate:quinone oxidoreductase (Mqo) AM340_RS15435 PF03974 Ecotin AM340_RS15445 PF13187 4Fe-4S dicluster domain AM340_RS15445 PF00037 4Fe-4S binding domain AM340_RS15445 PF12800 4Fe-4S binding domain AM340_RS15450 PF03927 NapD protein AM340_RS15455 PF01568 Molydopterin dinucleotide binding domain AM340_RS15455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM340_RS15455 PF00384 Molybdopterin oxidoreductase AM340_RS15460 PF12838 4Fe-4S dicluster domain AM340_RS15460 PF12800 4Fe-4S binding domain AM340_RS15465 PF13237 4Fe-4S dicluster domain AM340_RS15465 PF12801 4Fe-4S binding domain AM340_RS15470 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AM340_RS15475 PF03264 NapC/NirT cytochrome c family, N-terminal region AM340_RS15480 PF00005 ABC transporter AM340_RS15485 PF03379 CcmB protein AM340_RS15490 PF01578 Cytochrome C assembly protein AM340_RS15495 PF04995 Heme exporter protein D (CcmD) AM340_RS15500 PF03100 CcmE AM340_RS15505 PF01578 Cytochrome C assembly protein AM340_RS15505 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM340_RS15510 PF08534 Redoxin AM340_RS15515 PF03918 Cytochrome C biogenesis protein AM340_RS15520 PF00072 Response regulator receiver domain AM340_RS15520 PF00196 Bacterial regulatory proteins, luxR family AM340_RS15525 PF03212 Pertactin AM340_RS15525 PF03797 Autotransporter beta-domain AM340_RS15525 PF16168 Adhesin of bacterial autotransporter system, probable stalk AM340_RS15535 PF11893 Domain of unknown function (DUF3413) AM340_RS15535 PF00884 Sulfatase AM340_RS15540 PF07208 Protein of unknown function (DUF1414) AM340_RS15545 PF04245 37-kD nucleoid-associated bacterial protein AM340_RS15550 PF01386 Ribosomal L25p family AM340_RS15555 PF04851 Type III restriction enzyme, res subunit AM340_RS15555 PF00271 Helicase conserved C-terminal domain AM340_RS15560 PF01479 S4 domain AM340_RS15560 PF00849 RNA pseudouridylate synthase AM340_RS15565 PF07690 Major Facilitator Superfamily AM340_RS15575 PF13989 YejG-like protein AM340_RS15580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM340_RS15580 PF00005 ABC transporter AM340_RS15585 PF12911 N-terminal TM domain of oligopeptide transport permease C AM340_RS15585 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS15590 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS15595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS15600 PF00563 EAL domain AM340_RS15600 PF12792 CSS motif domain associated with EAL AM340_RS15605 PF00877 NlpC/P60 family AM340_RS15610 PF01569 PAP2 superfamily AM340_RS15615 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM340_RS15615 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM340_RS15620 PF01232 Mannitol dehydrogenase Rossmann domain AM340_RS15620 PF08125 Mannitol dehydrogenase C-terminal domain AM340_RS15625 PF08207 Elongation factor P (EF-P) KOW-like domain AM340_RS15625 PF01132 Elongation factor P (EF-P) OB domain AM340_RS15625 PF09285 Elongation factor P, C-terminal AM340_RS15630 PF03692 Putative zinc- or iron-chelating domain AM340_RS15635 PF07690 Major Facilitator Superfamily AM340_RS15645 PF00381 PTS HPr component phosphorylation site AM340_RS15645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS15650 PF00294 pfkB family carbohydrate kinase AM340_RS15655 PF02378 Phosphotransferase system, EIIC AM340_RS15655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS15660 PF00294 pfkB family carbohydrate kinase AM340_RS15665 PF04227 Indigoidine synthase A like protein AM340_RS15670 PF01773 Na+ dependent nucleoside transporter N-terminus AM340_RS15670 PF07662 Na+ dependent nucleoside transporter C-terminus AM340_RS15675 PF00027 Cyclic nucleotide-binding domain AM340_RS15680 PF01156 Inosine-uridine preferring nucleoside hydrolase AM340_RS15685 PF01773 Na+ dependent nucleoside transporter N-terminus AM340_RS15685 PF07662 Na+ dependent nucleoside transporter C-terminus AM340_RS15690 PF00294 pfkB family carbohydrate kinase AM340_RS15695 PF01261 Xylose isomerase-like TIM barrel AM340_RS15700 PF03601 Conserved hypothetical protein 698 AM340_RS15705 PF03466 LysR substrate binding domain AM340_RS15705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS15710 PF00324 Amino acid permease AM340_RS15725 PF00756 Putative esterase AM340_RS15735 PF01227 GTP cyclohydrolase I AM340_RS15740 PF04235 Protein of unknown function (DUF418) AM340_RS15750 PF00356 Bacterial regulatory proteins, lacI family AM340_RS15755 PF13407 Periplasmic binding protein domain AM340_RS15760 PF00005 ABC transporter AM340_RS15765 PF02653 Branched-chain amino acid transport system / permease component AM340_RS15770 PF01180 Dihydroorotate dehydrogenase AM340_RS15775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS15775 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM340_RS15780 PF10808 Protein of unknown function (DUF2542) AM340_RS15785 PF02698 DUF218 domain AM340_RS15790 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AM340_RS15790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM340_RS15795 PF04172 LrgB-like family AM340_RS15800 PF03788 LrgA family AM340_RS15805 PF01207 Dihydrouridine synthase (Dus) AM340_RS15810 PF01548 Transposase AM340_RS15810 PF02371 Transposase IS116/IS110/IS902 family AM340_RS15820 PF00230 Major intrinsic protein AM340_RS15825 PF11398 Protein of unknown function (DUF2813) AM340_RS15830 PF04393 Protein of unknown function (DUF535) AM340_RS15835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS15840 PF00005 ABC transporter AM340_RS15840 PF02687 FtsX-like permease family AM340_RS15840 PF12704 MacB-like periplasmic core domain AM340_RS15845 PF00313 'Cold-shock' DNA-binding domain AM340_RS15850 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM340_RS15855 PF00004 ATPase family associated with various cellular activities (AAA) AM340_RS15855 PF07724 AAA domain (Cdc48 subfamily) AM340_RS15855 PF10431 C-terminal, D2-small domain, of ClpB protein AM340_RS15855 PF17871 AAA lid domain AM340_RS15855 PF02861 Clp amino terminal domain, pathogenicity island component AM340_RS15870 PF01176 Translation initiation factor 1A / IF-1 AM340_RS15875 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM340_RS15880 PF00005 ABC transporter AM340_RS15880 PF00664 ABC transporter transmembrane region AM340_RS15885 PF00664 ABC transporter transmembrane region AM340_RS15885 PF00005 ABC transporter AM340_RS15890 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS15900 PF01037 Lrp/AsnC ligand binding domain AM340_RS15905 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM340_RS15905 PF09397 Ftsk gamma domain AM340_RS15905 PF01580 FtsK/SpoIIIE family AM340_RS15905 PF17854 FtsK alpha domain AM340_RS15910 PF03548 Outer membrane lipoprotein carrier protein LolA AM340_RS15915 PF16193 AAA C-terminal domain AM340_RS15915 PF00004 ATPase family associated with various cellular activities (AAA) AM340_RS15915 PF12002 MgsA AAA+ ATPase C terminal AM340_RS15920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM340_RS15920 PF02403 Seryl-tRNA synthetase N-terminal domain AM340_RS15925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM340_RS15925 PF01568 Molydopterin dinucleotide binding domain AM340_RS15925 PF00384 Molybdopterin oxidoreductase AM340_RS15930 PF12800 4Fe-4S binding domain AM340_RS15930 PF13247 4Fe-4S dicluster domain AM340_RS15935 PF04976 DMSO reductase anchor subunit (DmsC) AM340_RS15940 PF00857 Isochorismatase family AM340_RS15945 PF07690 Major Facilitator Superfamily AM340_RS15950 PF13520 Amino acid permease AM340_RS15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS15955 PF03466 LysR substrate binding domain AM340_RS15960 PF02525 Flavodoxin-like fold AM340_RS15965 PF04055 Radical SAM superfamily AM340_RS15970 PF01228 Glycine radical AM340_RS15970 PF02901 Pyruvate formate lyase-like AM340_RS15975 PF01226 Formate/nitrite transporter AM340_RS15980 PF18381 YcaO cyclodehydratase C-terminal domain AM340_RS15980 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM340_RS15985 PF04239 Protein of unknown function (DUF421) AM340_RS15990 PF00266 Aminotransferase class-V AM340_RS15995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM340_RS16000 PF01609 Transposase DDE domain AM340_RS16000 PF13006 Insertion element 4 transposase N-terminal AM340_RS16005 PF01435 Peptidase family M48 AM340_RS16010 PF02224 Cytidylate kinase AM340_RS16015 PF00575 S1 RNA binding domain AM340_RS16020 PF00216 Bacterial DNA-binding protein AM340_RS16025 PF00753 Metallo-beta-lactamase superfamily AM340_RS16025 PF03772 Competence protein AM340_RS16030 PF00664 ABC transporter transmembrane region AM340_RS16030 PF00005 ABC transporter AM340_RS16035 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM340_RS16040 PF06224 Winged helix DNA-binding domain AM340_RS16045 PF03966 Trm112p-like protein AM340_RS16050 PF02348 Cytidylyltransferase AM340_RS16055 PF01636 Phosphotransferase enzyme family AM340_RS16060 PF02698 DUF218 domain AM340_RS16065 PF13847 Methyltransferase domain AM340_RS16070 PF17192 MukF middle domain AM340_RS16070 PF17193 MukF C-terminal domain AM340_RS16070 PF03882 MukF winged-helix domain AM340_RS16075 PF04288 MukE-like family AM340_RS16080 PF04310 MukB N-terminal AM340_RS16080 PF16330 MukB hinge domain AM340_RS16085 PF03734 L,D-transpeptidase catalytic domain AM340_RS16085 PF01471 Putative peptidoglycan binding domain AM340_RS16095 PF05951 Bacterial protein of unknown function (DUF882) AM340_RS16100 PF00753 Metallo-beta-lactamase superfamily AM340_RS16105 PF00155 Aminotransferase class I and II AM340_RS16110 PF00267 Gram-negative porin AM340_RS16115 PF01336 OB-fold nucleic acid binding domain AM340_RS16115 PF00152 tRNA synthetases class II (D, K and N) AM340_RS16120 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM340_RS16120 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM340_RS16125 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM340_RS16125 PF01433 Peptidase family M1 domain AM340_RS16125 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM340_RS16130 PF00005 ABC transporter AM340_RS16135 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS16140 PF00296 Luciferase-like monooxygenase AM340_RS16145 PF09084 NMT1/THI5 like AM340_RS16150 PF03358 NADPH-dependent FMN reductase AM340_RS16160 PF00419 Fimbrial protein AM340_RS16165 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS16165 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS16170 PF00577 Outer membrane usher protein AM340_RS16170 PF13954 PapC N-terminal domain AM340_RS16170 PF13953 PapC C-terminal domain AM340_RS16175 PF00419 Fimbrial protein AM340_RS16180 PF00419 Fimbrial protein AM340_RS16185 PF00419 Fimbrial protein AM340_RS16190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS16190 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS16195 PF01180 Dihydroorotate dehydrogenase AM340_RS16200 PF07126 Cell-division protein ZapC AM340_RS16205 PF00111 2Fe-2S iron-sulfur cluster binding domain AM340_RS16205 PF03473 MOSC domain AM340_RS16205 PF03476 MOSC N-terminal beta barrel domain AM340_RS16210 PF01170 Putative RNA methylase family UPF0020 AM340_RS16210 PF02926 THUMP domain AM340_RS16210 PF10672 S-adenosylmethionine-dependent methyltransferase AM340_RS16215 PF00005 ABC transporter AM340_RS16215 PF16326 ABC transporter C-terminal domain AM340_RS16215 PF12848 ABC transporter AM340_RS16220 PF04403 Paraquat-inducible protein A AM340_RS16225 PF02470 MlaD protein AM340_RS16230 PF03886 ABC-type transport auxiliary lipoprotein component AM340_RS16235 PF04957 Ribosome modulation factor AM340_RS16240 PF07977 FabA-like domain AM340_RS16245 PF05362 Lon protease (S16) C-terminal proteolytic domain AM340_RS16245 PF13654 AAA domain AM340_RS16250 PF17414 MatP C-terminal ribbon-helix-helix domain AM340_RS16250 PF06303 MatP N-terminal domain AM340_RS16255 PF00691 OmpA family AM340_RS16255 PF01389 OmpA-like transmembrane domain AM340_RS16265 PF03846 Cell division inhibitor SulA AM340_RS16270 PF04994 TfoX C-terminal domain AM340_RS16270 PF04993 TfoX N-terminal domain AM340_RS16275 PF12805 FUSC-like inner membrane protein yccS AM340_RS16280 PF03733 Inner membrane component domain AM340_RS16285 PF13361 UvrD-like helicase C-terminal domain AM340_RS16285 PF12462 DNA helicase IV / RNA helicase N terminal AM340_RS16285 PF00580 UvrD/REP helicase N-terminal domain AM340_RS16290 PF02142 MGS-like domain AM340_RS16295 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM340_RS16300 PF13380 CoA binding domain AM340_RS16305 PF08755 Hemimethylated DNA-binding protein YccV like AM340_RS16310 PF17785 PUA-like domain AM340_RS16310 PF10672 S-adenosylmethionine-dependent methyltransferase AM340_RS16315 PF00708 Acylphosphatase AM340_RS16320 PF04358 DsrC like protein AM340_RS16325 PF01027 Inhibitor of apoptosis-promoting Bax1 AM340_RS16335 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM340_RS16335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM340_RS16340 PF00374 Nickel-dependent hydrogenase AM340_RS16345 PF01292 Prokaryotic cytochrome b561 AM340_RS16350 PF01750 Hydrogenase maturation protease AM340_RS16355 PF07449 Hydrogenase-1 expression protein HyaE AM340_RS16360 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AM340_RS16365 PF01654 Cytochrome bd terminal oxidase subunit I AM340_RS16370 PF02322 Cytochrome bd terminal oxidase subunit II AM340_RS16375 PF08173 Membrane bound YbgT-like protein AM340_RS16380 PF00328 Histidine phosphatase superfamily (branch 2) AM340_RS16385 PF00313 'Cold-shock' DNA-binding domain AM340_RS16390 PF00313 'Cold-shock' DNA-binding domain AM340_RS16400 PF15939 Putative antitoxin of bacterial toxin-antitoxin system AM340_RS16405 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system AM340_RS16410 PF12801 4Fe-4S binding domain AM340_RS16415 PF01627 Hpt domain AM340_RS16415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS16415 PF00672 HAMP domain AM340_RS16415 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS16415 PF00072 Response regulator receiver domain AM340_RS16420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM340_RS16425 PF00072 Response regulator receiver domain AM340_RS16425 PF00486 Transcriptional regulatory protein, C terminal AM340_RS16430 PF03264 NapC/NirT cytochrome c family, N-terminal region AM340_RS16435 PF18364 Molybdopterin oxidoreductase N-terminal domain AM340_RS16435 PF00384 Molybdopterin oxidoreductase AM340_RS16435 PF01568 Molydopterin dinucleotide binding domain AM340_RS16440 PF02613 Nitrate reductase delta subunit AM340_RS16450 PF01556 DnaJ C terminal domain AM340_RS16450 PF00226 DnaJ domain AM340_RS16460 PF00328 Histidine phosphatase superfamily (branch 2) AM340_RS16465 PF13993 YccJ-like protein AM340_RS16470 PF03358 NADPH-dependent FMN reductase AM340_RS16480 PF10685 Stress-induced bacterial acidophilic repeat motif AM340_RS16485 PF00860 Permease family AM340_RS16490 PF01613 Flavin reductase like domain AM340_RS16495 PF00881 Nitroreductase family AM340_RS16500 PF12697 Alpha/beta hydrolase family AM340_RS16505 PF01042 Endoribonuclease L-PSP AM340_RS16510 PF00857 Isochorismatase family AM340_RS16520 PF08362 YcdC-like protein, C-terminal region AM340_RS16520 PF00440 Bacterial regulatory proteins, tetR family AM340_RS16525 PF01619 Proline dehydrogenase AM340_RS16525 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM340_RS16525 PF00171 Aldehyde dehydrogenase family AM340_RS16525 PF14850 DNA-binding domain of Proline dehydrogenase AM340_RS16535 PF00474 Sodium:solute symporter family AM340_RS16540 PF03239 Iron permease FTR1 family AM340_RS16545 PF13473 Cupredoxin-like domain AM340_RS16545 PF09375 Imelysin AM340_RS16550 PF04261 Dyp-type peroxidase family AM340_RS16560 PF02562 PhoH-like protein AM340_RS16565 PF13994 PgaD-like protein AM340_RS16570 PF00535 Glycosyl transferase family 2 AM340_RS16575 PF14883 Hypothetical glycosyl hydrolase family 13 AM340_RS16575 PF01522 Polysaccharide deacetylase AM340_RS16595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM340_RS16600 PF02811 PHP domain AM340_RS16605 PF02613 Nitrate reductase delta subunit AM340_RS16610 PF06496 Protein of unknown function (DUF1097) AM340_RS16615 PF03783 Curli production assembly/transport component CsgG AM340_RS16620 PF10614 Type VIII secretion system (T8SS), CsgF protein AM340_RS16625 PF10627 Curli assembly protein CsgE AM340_RS16640 PF07012 Curlin associated repeat AM340_RS16645 PF07012 Curlin associated repeat AM340_RS16650 PF10610 Thin aggregative fimbriae synthesis protein AM340_RS16660 PF01661 Macro domain AM340_RS16665 PF13091 PLD-like domain AM340_RS16670 PF01757 Acyltransferase family AM340_RS16685 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM340_RS16690 PF00535 Glycosyl transferase family 2 AM340_RS16695 PF07119 Protein of unknown function (DUF1375) AM340_RS16700 PF13984 MsyB protein AM340_RS16705 PF07690 Major Facilitator Superfamily AM340_RS16710 PF03279 Bacterial lipid A biosynthesis acyltransferase AM340_RS16715 PF17773 UPF0176 acylphosphatase like domain AM340_RS16715 PF12368 Rhodanase C-terminal AM340_RS16715 PF00581 Rhodanese-like domain AM340_RS16720 PF04264 YceI-like domain AM340_RS16725 PF01292 Prokaryotic cytochrome b561 AM340_RS16730 PF10968 Protein of unknown function (DUF2770) AM340_RS16735 PF01266 FAD dependent oxidoreductase AM340_RS16740 PF13991 BssS protein family AM340_RS16750 PF06183 DinI-like family AM340_RS16755 PF01979 Amidohydrolase family AM340_RS16760 PF07273 Protein of unknown function (DUF1439) AM340_RS16765 PF13417 Glutathione S-transferase, N-terminal domain AM340_RS16765 PF04399 Glutaredoxin 2, C terminal domain AM340_RS16770 PF07690 Major Facilitator Superfamily AM340_RS16775 PF13302 Acetyltransferase (GNAT) domain AM340_RS16780 PF04337 Protein of unknown function, DUF480 AM340_RS16785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM340_RS16790 PF03023 Lipid II flippase MurJ AM340_RS16795 PF05130 FlgN protein AM340_RS16800 PF04316 Anti-sigma-28 factor, FlgM AM340_RS16805 PF13144 Chaperone for flagella basal body P-ring formation AM340_RS16810 PF00460 Flagella basal body rod protein AM340_RS16815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM340_RS16815 PF00460 Flagella basal body rod protein AM340_RS16825 PF07559 Flagellar basal body protein FlaE AM340_RS16825 PF00460 Flagella basal body rod protein AM340_RS16825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM340_RS16830 PF00460 Flagella basal body rod protein AM340_RS16830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM340_RS16835 PF00460 Flagella basal body rod protein AM340_RS16835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM340_RS16840 PF02107 Flagellar L-ring protein AM340_RS16845 PF02119 Flagellar P-ring protein AM340_RS16850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM340_RS16850 PF10135 Rod binding protein AM340_RS16855 PF00460 Flagella basal body rod protein AM340_RS16855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM340_RS16860 PF00669 Bacterial flagellin N-terminal helical region AM340_RS16875 PF12111 Polyribonucleotide phosphorylase C terminal AM340_RS16875 PF00575 S1 RNA binding domain AM340_RS16875 PF10150 Ribonuclease E/G family AM340_RS16885 PF01479 S4 domain AM340_RS16885 PF00849 RNA pseudouridylate synthase AM340_RS16890 PF02545 Maf-like protein AM340_RS16895 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM340_RS16900 PF01783 Ribosomal L32p protein family AM340_RS16905 PF02504 Fatty acid synthesis protein AM340_RS16910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM340_RS16910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM340_RS16915 PF00698 Acyl transferase domain AM340_RS16925 PF00550 Phosphopantetheine attachment site AM340_RS16930 PF00109 Beta-ketoacyl synthase, N-terminal domain AM340_RS16930 PF02801 Beta-ketoacyl synthase, C-terminal domain AM340_RS16935 PF01063 Amino-transferase class IV AM340_RS16940 PF02618 YceG-like family AM340_RS16945 PF02223 Thymidylate kinase AM340_RS16950 PF09115 DNA polymerase III, delta subunit, C terminal AM340_RS16955 PF01026 TatD related DNase AM340_RS16960 PF00367 phosphotransferase system, EIIB AM340_RS16960 PF02378 Phosphotransferase system, EIIC AM340_RS16970 PF01230 HIT domain AM340_RS16975 PF07233 Protein of unknown function (DUF1425) AM340_RS16980 PF13036 Peptidoglycan-synthase activator LpoB AM340_RS16985 PF01636 Phosphotransferase enzyme family AM340_RS16990 PF00933 Glycosyl hydrolase family 3 N terminal domain AM340_RS16995 PF05728 Uncharacterised protein family (UPF0227) AM340_RS17000 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS17010 PF05433 Glycine zipper 2TM domain AM340_RS17015 PF00440 Bacterial regulatory proteins, tetR family AM340_RS17020 PF07338 Protein of unknown function (DUF1471) AM340_RS17025 PF17969 L,D-transpeptidase C-terminal domain AM340_RS17025 PF03734 L,D-transpeptidase catalytic domain AM340_RS17025 PF01476 LysM domain AM340_RS17030 PF17757 UvrB interaction domain AM340_RS17030 PF00271 Helicase conserved C-terminal domain AM340_RS17030 PF00270 DEAD/DEAH box helicase AM340_RS17030 PF03461 TRCF domain AM340_RS17030 PF02559 CarD-like/TRCF domain AM340_RS17035 PF01757 Acyltransferase family AM340_RS17040 PF02687 FtsX-like permease family AM340_RS17040 PF12704 MacB-like periplasmic core domain AM340_RS17045 PF00005 ABC transporter AM340_RS17050 PF12704 MacB-like periplasmic core domain AM340_RS17050 PF02687 FtsX-like permease family AM340_RS17055 PF00480 ROK family AM340_RS17060 PF02146 Sir2 family AM340_RS17065 PF04536 TPM domain AM340_RS17070 PF12158 Protein of unknown function (DUF3592) AM340_RS17075 PF13416 Bacterial extracellular solute-binding protein AM340_RS17080 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS17085 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS17090 PF08402 TOBE domain AM340_RS17090 PF00005 ABC transporter AM340_RS17100 PF01546 Peptidase family M20/M25/M40 AM340_RS17100 PF07687 Peptidase dimerisation domain AM340_RS17105 PF08007 Cupin superfamily protein AM340_RS17200 PF03354 Phage Terminase AM340_RS17210 PF08918 PhoQ Sensor AM340_RS17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS17215 PF00486 Transcriptional regulatory protein, C terminal AM340_RS17215 PF00072 Response regulator receiver domain AM340_RS17220 PF00206 Lyase AM340_RS17220 PF08328 Adenylosuccinate lyase C-terminal AM340_RS17225 PF04356 Protein of unknown function (DUF489) AM340_RS17235 PF00293 NUDIX domain AM340_RS17240 PF00849 RNA pseudouridylate synthase AM340_RS17255 PF00180 Isocitrate/isopropylmalate dehydrogenase AM340_RS17260 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AM340_RS17260 PF00589 Phage integrase family AM340_RS17325 PF10800 Protein of unknown function (DUF2528) AM340_RS17360 PF07471 Phage DNA packaging protein Nu1 AM340_RS17370 PF06316 Enterobacterial Ail/Lom protein AM340_RS17380 PF02796 Helix-turn-helix domain of resolvase AM340_RS17380 PF00239 Resolvase, N terminal domain AM340_RS17385 PF07484 Phage Tail Collar Domain AM340_RS17390 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM340_RS17395 PF07484 Phage Tail Collar Domain AM340_RS17500 PF04233 Phage Mu protein F like protein AM340_RS17510 PF03237 Terminase-like family AM340_RS17585 PF13401 AAA domain AM340_RS17585 PF01471 Putative peptidoglycan binding domain AM340_RS17595 PF07352 Bacteriophage Mu Gam like protein AM340_RS17630 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS17650 PF06252 Protein of unknown function (DUF1018) AM340_RS17655 PF08765 Mor transcription activator family AM340_RS17660 PF13505 Outer membrane protein beta-barrel domain AM340_RS17665 PF07484 Phage Tail Collar Domain AM340_RS17665 PF08400 Prophage tail fibre N-terminal AM340_RS17665 PF03335 Phage tail fibre repeat AM340_RS17685 PF00950 ABC 3 transport family AM340_RS17690 PF00950 ABC 3 transport family AM340_RS17695 PF00005 ABC transporter AM340_RS17700 PF01297 Zinc-uptake complex component A periplasmic AM340_RS17720 PF00180 Isocitrate/isopropylmalate dehydrogenase AM340_RS17730 PF07166 Protein of unknown function (DUF1398) AM340_RS17735 PF13411 MerR HTH family regulatory protein AM340_RS17740 PF00563 EAL domain AM340_RS17740 PF04940 Sensors of blue-light using FAD AM340_RS17745 PF10798 Biofilm development protein YmgB/AriR AM340_RS17755 PF10798 Biofilm development protein YmgB/AriR AM340_RS17770 PF00563 EAL domain AM340_RS17770 PF12792 CSS motif domain associated with EAL AM340_RS17785 PF03797 Autotransporter beta-domain AM340_RS17790 PF16456 YmgD protein AM340_RS17795 PF13436 Glycine-zipper domain AM340_RS17810 PF03797 Autotransporter beta-domain AM340_RS17815 PF03776 Septum formation topological specificity factor MinE AM340_RS17820 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM340_RS17825 PF05209 Septum formation inhibitor MinC, N-terminal domain AM340_RS17825 PF03775 Septum formation inhibitor MinC, C-terminal domain AM340_RS17830 PF05666 Fels-1 Prophage Protein-like AM340_RS17835 PF04151 Bacterial pre-peptidase C-terminal domain AM340_RS17845 PF05166 YcgL domain AM340_RS17850 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM340_RS17855 PF03692 Putative zinc- or iron-chelating domain AM340_RS17860 PF06109 Haemolysin E (HlyE) AM340_RS17865 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM340_RS17865 PF13542 Helix-turn-helix domain of transposase family ISL3 AM340_RS17865 PF01610 Transposase AM340_RS17875 PF00717 Peptidase S24-like AM340_RS17880 PF13438 Domain of unknown function (DUF4113) AM340_RS17880 PF00817 impB/mucB/samB family AM340_RS17880 PF11799 impB/mucB/samB family C-terminal domain AM340_RS17880 PF11798 IMS family HHH motif AM340_RS17885 PF02600 Disulfide bond formation protein DsbB AM340_RS17890 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM340_RS17895 PF07840 FadR C-terminal domain AM340_RS17895 PF00392 Bacterial regulatory proteins, gntR family AM340_RS17900 PF04293 SpoVR like protein AM340_RS17905 PF01266 FAD dependent oxidoreductase AM340_RS17910 PF01168 Alanine racemase, N-terminal domain AM340_RS17910 PF00842 Alanine racemase, C-terminal domain AM340_RS17930 PF00999 Sodium/hydrogen exchanger family AM340_RS17930 PF02080 TrkA-C domain AM340_RS17930 PF03471 Transporter associated domain AM340_RS17935 PF17676 LD-carboxypeptidase C-terminal domain AM340_RS17935 PF02016 LD-carboxypeptidase N-terminal domain AM340_RS17940 PF01464 Transglycosylase SLT domain AM340_RS17945 PF07317 Flagellar regulator YcgR AM340_RS17945 PF07238 PilZ domain AM340_RS17950 PF04226 Transglycosylase associated protein AM340_RS17960 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM340_RS17960 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM340_RS17965 PF13649 Methyltransferase domain AM340_RS17970 PF00005 ABC transporter AM340_RS17975 PF01032 FecCD transport family AM340_RS17980 PF01497 Periplasmic binding protein AM340_RS17990 PF01204 Trehalase AM340_RS17995 PF00391 PEP-utilising enzyme, mobile domain AM340_RS17995 PF05524 PEP-utilising enzyme, N-terminal AM340_RS17995 PF00381 PTS HPr component phosphorylation site AM340_RS17995 PF03610 PTS system fructose IIA component AM340_RS18000 PF02734 DAK2 domain AM340_RS18005 PF02733 Dak1 domain AM340_RS18010 PF02954 Bacterial regulatory protein, Fis family AM340_RS18010 PF00989 PAS fold AM340_RS18010 PF00158 Sigma-54 interaction domain AM340_RS18020 PF01926 50S ribosome-binding GTPase AM340_RS18020 PF06071 Protein of unknown function (DUF933) AM340_RS18025 PF01195 Peptidyl-tRNA hydrolase AM340_RS18030 PF10762 Protein of unknown function (DUF2583) AM340_RS18035 PF01740 STAS domain AM340_RS18035 PF00916 Sulfate permease family AM340_RS18045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM340_RS18045 PF14572 Phosphoribosyl synthetase-associated domain AM340_RS18055 PF00288 GHMP kinases N terminal domain AM340_RS18055 PF08544 GHMP kinases C terminal AM340_RS18060 PF03550 Outer membrane lipoprotein LolB AM340_RS18065 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM340_RS18065 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM340_RS18065 PF01488 Shikimate / quinate 5-dehydrogenase AM340_RS18070 PF00472 RF-1 domain AM340_RS18070 PF03462 PCRF domain AM340_RS18075 PF17827 PrmC N-terminal domain AM340_RS18075 PF13847 Methyltransferase domain AM340_RS18080 PF04247 Invasion gene expression up-regulator, SirB AM340_RS18085 PF13369 Transglutaminase-like superfamily AM340_RS18090 PF00793 DAHP synthetase I family AM340_RS18095 PF13940 Toxin Ldr, type I toxin-antitoxin system AM340_RS18100 PF13940 Toxin Ldr, type I toxin-antitoxin system AM340_RS18105 PF01699 Sodium/calcium exchanger protein AM340_RS18110 PF06150 ChaB AM340_RS18115 PF04752 ChaC-like protein AM340_RS18120 PF02635 DsrE/DsrF-like family AM340_RS18125 PF11924 Inverse autotransporter, beta-domain AM340_RS18130 PF00196 Bacterial regulatory proteins, luxR family AM340_RS18130 PF00072 Response regulator receiver domain AM340_RS18135 PF07730 Histidine kinase AM340_RS18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS18135 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM340_RS18135 PF00672 HAMP domain AM340_RS18145 PF07690 Major Facilitator Superfamily AM340_RS18150 PF00384 Molybdopterin oxidoreductase AM340_RS18150 PF01568 Molydopterin dinucleotide binding domain AM340_RS18150 PF14710 Respiratory nitrate reductase alpha N-terminal AM340_RS18155 PF14711 Respiratory nitrate reductase beta C-terminal AM340_RS18155 PF13247 4Fe-4S dicluster domain AM340_RS18160 PF02613 Nitrate reductase delta subunit AM340_RS18165 PF02665 Nitrate reductase gamma subunit AM340_RS18180 PF01842 ACT domain AM340_RS18180 PF00551 Formyl transferase AM340_RS18185 PF02810 SEC-C motif AM340_RS18190 PF01734 Patatin-like phospholipase AM340_RS18195 PF00072 Response regulator receiver domain AM340_RS18200 PF00483 Nucleotidyl transferase AM340_RS18205 PF00816 H-NS histone family AM340_RS18210 PF00265 Thymidine kinase AM340_RS18215 PF01609 Transposase DDE domain AM340_RS18215 PF13006 Insertion element 4 transposase N-terminal AM340_RS18220 PF00465 Iron-containing alcohol dehydrogenase AM340_RS18220 PF00171 Aldehyde dehydrogenase family AM340_RS18225 PF01914 MarC family integral membrane protein AM340_RS18230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS18235 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS18240 PF12911 N-terminal TM domain of oligopeptide transport permease C AM340_RS18240 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS18245 PF00005 ABC transporter AM340_RS18245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM340_RS18250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM340_RS18250 PF00005 ABC transporter AM340_RS18255 PF04269 Protein of unknown function, DUF440 AM340_RS18260 PF13091 PLD-like domain AM340_RS18260 PF13396 Phospholipase_D-nuclease N-terminal AM340_RS18270 PF02254 TrkA-N domain AM340_RS18270 PF07885 Ion channel AM340_RS18275 PF03795 YCII-related domain AM340_RS18280 PF03544 Gram-negative bacterial TonB protein C-terminal AM340_RS18285 PF03061 Thioesterase superfamily AM340_RS18290 PF04279 Intracellular septation protein A AM340_RS18305 PF03922 OmpW family AM340_RS18310 PF00589 Phage integrase family AM340_RS18310 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AM340_RS18325 PF07358 Protein of unknown function (DUF1482) AM340_RS18330 PF05358 DicB protein AM340_RS18350 PF07151 Protein of unknown function (DUF1391) AM340_RS18375 PF01695 IstB-like ATP binding protein AM340_RS18380 PF07789 Protein of unknown function (DUF1627) AM340_RS18390 PF02677 Epoxyqueuosine reductase QueH AM340_RS18395 PF01848 Hok/gef family AM340_RS18410 PF06147 Protein of unknown function (DUF968) AM340_RS18415 PF05866 Endodeoxyribonuclease RusA AM340_RS18430 PF01555 DNA methylase AM340_RS18455 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase AM340_RS18460 PF04971 Bacteriophage P21 holin S AM340_RS18465 PF07041 Protein of unknown function (DUF1327) AM340_RS18475 PF00959 Phage lysozyme AM340_RS18490 PF13132 Domain of unknown function (DUF3950) AM340_RS18500 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS18515 PF07471 Phage DNA packaging protein Nu1 AM340_RS18520 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM340_RS18525 PF02831 gpW AM340_RS18535 PF01343 Peptidase family S49 AM340_RS18545 PF03864 Phage major capsid protein E AM340_RS18620 PF06316 Enterobacterial Ail/Lom protein AM340_RS18650 PF03692 Putative zinc- or iron-chelating domain AM340_RS18665 PF05974 Domain of unknown function (DUF892) AM340_RS18670 PF05974 Domain of unknown function (DUF892) AM340_RS18675 PF10685 Stress-induced bacterial acidophilic repeat motif AM340_RS18680 PF00290 Tryptophan synthase alpha chain AM340_RS18685 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS18690 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM340_RS18690 PF00218 Indole-3-glycerol phosphate synthase AM340_RS18695 PF00117 Glutamine amidotransferase class-I AM340_RS18695 PF02885 Glycosyl transferase family, helical bundle domain AM340_RS18695 PF00591 Glycosyl transferase family, a/b domain AM340_RS18700 PF04715 Anthranilate synthase component I, N terminal region AM340_RS18700 PF00425 chorismate binding enzyme AM340_RS18705 PF08255 Trp-operon Leader Peptide AM340_RS18710 PF02811 PHP domain AM340_RS18715 PF01300 Telomere recombination AM340_RS18720 PF09972 Predicted membrane protein (DUF2207) AM340_RS18725 PF01479 S4 domain AM340_RS18725 PF00849 RNA pseudouridylate synthase AM340_RS18750 PF12557 Cob(I)alamin adenosyltransferase N terminal AM340_RS18750 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM340_RS18755 PF00106 short chain dehydrogenase AM340_RS18760 PF08496 Peptidase family S49 N-terminal AM340_RS18760 PF01343 Peptidase family S49 AM340_RS18765 PF10692 Protein of unknown function (DUF2498) AM340_RS18775 PF01396 Topoisomerase DNA binding C4 zinc finger AM340_RS18775 PF01751 Toprim domain AM340_RS18775 PF01131 DNA topoisomerase AM340_RS18775 PF08272 Topoisomerase I zinc-ribbon-like AM340_RS18785 PF03466 LysR substrate binding domain AM340_RS18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS18805 PF00694 Aconitase C-terminal domain AM340_RS18805 PF00330 Aconitase family (aconitate hydratase) AM340_RS18810 PF00925 GTP cyclohydrolase II AM340_RS18815 PF01569 PAP2 superfamily AM340_RS18820 PF06305 Lipopolysaccharide assembly protein A domain AM340_RS18825 PF18073 Rubredoxin metal binding domain AM340_RS18830 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM340_RS18835 PF01253 Translation initiation factor SUI1 AM340_RS18840 PF05433 Glycine zipper 2TM domain AM340_RS18845 PF00455 DeoR C terminal sensor domain AM340_RS18845 PF08220 DeoR-like helix-turn-helix domain AM340_RS18855 PF13426 PAS domain AM340_RS18855 PF00563 EAL domain AM340_RS18855 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS18865 PF17876 Cold shock domain AM340_RS18865 PF08206 Ribonuclease B OB domain AM340_RS18865 PF00773 RNB domain AM340_RS18865 PF00575 S1 RNA binding domain AM340_RS18885 PF16295 Tetracyclin repressor-like, C-terminal domain AM340_RS18885 PF00440 Bacterial regulatory proteins, tetR family AM340_RS18890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS18890 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS18900 PF02321 Outer membrane efflux protein AM340_RS18905 PF07690 Major Facilitator Superfamily AM340_RS18910 PF00005 ABC transporter AM340_RS18915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM340_RS18915 PF00005 ABC transporter AM340_RS18920 PF12911 N-terminal TM domain of oligopeptide transport permease C AM340_RS18920 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS18925 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS18930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS18940 PF10820 Protein of unknown function (DUF2543) AM340_RS18945 PF00324 Amino acid permease AM340_RS18950 PF00120 Glutamine synthetase, catalytic domain AM340_RS18955 PF07722 Peptidase C26 AM340_RS18960 PF07883 Cupin domain AM340_RS18960 PF01381 Helix-turn-helix AM340_RS18965 PF00171 Aldehyde dehydrogenase family AM340_RS18970 PF01266 FAD dependent oxidoreductase AM340_RS18975 PF00202 Aminotransferase class-III AM340_RS18985 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM340_RS18985 PF13542 Helix-turn-helix domain of transposase family ISL3 AM340_RS18985 PF01610 Transposase AM340_RS18995 PF00158 Sigma-54 interaction domain AM340_RS18995 PF02954 Bacterial regulatory protein, Fis family AM340_RS19000 PF04012 PspA/IM30 family AM340_RS19005 PF06667 Phage shock protein B AM340_RS19010 PF04024 PspC domain AM340_RS19015 PF09584 Phage shock protein PspD (Phageshock_PspD) AM340_RS19020 PF00581 Rhodanese-like domain AM340_RS19025 PF00128 Alpha amylase, catalytic domain AM340_RS19030 PF01547 Bacterial extracellular solute-binding protein AM340_RS19035 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS19040 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS19045 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS19050 PF00107 Zinc-binding dehydrogenase AM340_RS19055 PF01261 Xylose isomerase-like TIM barrel AM340_RS19060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM340_RS19060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM340_RS19065 PF03633 Glycosyl hydrolase family 65, C-terminal domain AM340_RS19065 PF03632 Glycosyl hydrolase family 65 central catalytic domain AM340_RS19065 PF03636 Glycosyl hydrolase family 65, N-terminal domain AM340_RS19070 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS19075 PF00005 ABC transporter AM340_RS19075 PF03459 TOBE domain AM340_RS19075 PF17912 MalK OB fold domain AM340_RS19080 PF09381 Outer membrane protein G (OmpG) AM340_RS19085 PF00356 Bacterial regulatory proteins, lacI family AM340_RS19085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM340_RS19090 PF04317 YcjX-like family, DUF463 AM340_RS19095 PF05128 Domain of unknown function (DUF697) AM340_RS19100 PF13188 PAS domain AM340_RS19100 PF18024 Helix-turn-helix domain AM340_RS19100 PF00158 Sigma-54 interaction domain AM340_RS19105 PF08534 Redoxin AM340_RS19110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM340_RS19110 PF13378 Enolase C-terminal domain-like AM340_RS19115 PF00246 Zinc carboxypeptidase AM340_RS19120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS19125 PF00924 Mechanosensitive ion channel AM340_RS19130 PF10749 Protein of unknown function (DUF2534) AM340_RS19135 PF00582 Universal stress protein family AM340_RS19140 PF00027 Cyclic nucleotide-binding domain AM340_RS19140 PF00325 Bacterial regulatory proteins, crp family AM340_RS19145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM340_RS19145 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM340_RS19150 PF03806 AbgT putative transporter family AM340_RS19165 PF01546 Peptidase family M20/M25/M40 AM340_RS19165 PF07687 Peptidase dimerisation domain AM340_RS19170 PF03466 LysR substrate binding domain AM340_RS19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS19180 PF01713 Smr domain AM340_RS19185 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS19185 PF08448 PAS fold AM340_RS19190 PF01544 CorA-like Mg2+ transporter protein AM340_RS19200 PF00270 DEAD/DEAH box helicase AM340_RS19200 PF00271 Helicase conserved C-terminal domain AM340_RS19200 PF03880 DbpA RNA binding domain AM340_RS19205 PF01171 PP-loop family AM340_RS19210 PF00582 Universal stress protein family AM340_RS19215 PF00267 Gram-negative porin AM340_RS19220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM340_RS19220 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AM340_RS19220 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AM340_RS19220 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM340_RS19220 PF10371 Domain of unknown function AM340_RS19225 PF03891 Domain of unknown function (DUF333) AM340_RS19240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM340_RS19240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM340_RS19245 PF11739 Dicarboxylate transport AM340_RS19250 PF13617 YnbE-like lipoprotein AM340_RS19255 PF07027 Protein of unknown function (DUF1318) AM340_RS19265 PF00248 Aldo/keto reductase family AM340_RS19270 PF10971 Protein of unknown function (DUF2773) AM340_RS19275 PF01066 CDP-alcohol phosphatidyltransferase AM340_RS19285 PF12147 Putative methyltransferase AM340_RS19285 PF12146 Serine aminopeptidase, S33 AM340_RS19305 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS19325 PF06406 StbA protein AM340_RS19330 PF10609 NUBPL iron-transfer P-loop NTPase AM340_RS19340 PF00589 Phage integrase family AM340_RS19345 PF01845 CcdB protein AM340_RS19350 PF07362 Post-segregation antitoxin CcdA AM340_RS19380 PF01051 Initiator Replication protein AM340_RS19385 PF00589 Phage integrase family AM340_RS19415 PF07715 TonB-dependent Receptor Plug Domain AM340_RS19415 PF00593 TonB dependent receptor AM340_RS19455 PF03526 Colicin E1 (microcin) immunity protein AM340_RS19490 PF07715 TonB-dependent Receptor Plug Domain AM340_RS19490 PF00593 TonB dependent receptor AM340_RS19520 PF00565 Staphylococcal nuclease homologue AM340_RS19525 PF05321 Haemolysin expression modulating protein AM340_RS19535 PF10723 Replication regulatory protein RepB AM340_RS19545 PF08048 Tap RepA1 leader peptide AM340_RS19550 PF02387 IncFII RepA protein family AM340_RS19560 PF02517 CPBP intramembrane metalloprotease AM340_RS19565 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM340_RS19580 PF00892 EamA-like transporter family AM340_RS19585 PF07690 Major Facilitator Superfamily AM340_RS19590 PF02909 Tetracyclin repressor-like, C-terminal domain AM340_RS19590 PF00440 Bacterial regulatory proteins, tetR family AM340_RS19610 PF09278 MerR, DNA binding AM340_RS19610 PF00376 MerR family regulatory protein AM340_RS19615 PF02411 MerT mercuric transport protein AM340_RS19620 PF00403 Heavy-metal-associated domain AM340_RS19625 PF03203 MerC mercury resistance protein AM340_RS19630 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS19630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM340_RS19630 PF00403 Heavy-metal-associated domain AM340_RS19635 PF13411 MerR HTH family regulatory protein AM340_RS19640 PF05052 MerE protein AM340_RS19645 PF13188 PAS domain AM340_RS19645 PF00563 EAL domain AM340_RS19645 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS19645 PF03707 Bacterial signalling protein N terminal repeat AM340_RS19660 PF13610 DDE domain AM340_RS19675 PF00578 AhpC/TSA family AM340_RS19680 PF04205 FMN-binding domain AM340_RS19690 PF03239 Iron permease FTR1 family AM340_RS19695 PF10634 Fe2+ transport protein AM340_RS19705 PF12704 MacB-like periplasmic core domain AM340_RS19705 PF00005 ABC transporter AM340_RS19705 PF02687 FtsX-like permease family AM340_RS19710 PF02687 FtsX-like permease family AM340_RS19710 PF12704 MacB-like periplasmic core domain AM340_RS19710 PF00005 ABC transporter AM340_RS19715 PF00005 ABC transporter AM340_RS19715 PF02687 FtsX-like permease family AM340_RS19715 PF12704 MacB-like periplasmic core domain AM340_RS19740 PF02395 Immunoglobulin A1 protease AM340_RS19740 PF03797 Autotransporter beta-domain AM340_RS19740 PF13018 Extended Signal Peptide of Type V secretion system AM340_RS19750 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS19770 PF05857 TraX protein AM340_RS19775 PF00561 alpha/beta hydrolase fold AM340_RS19780 PF04352 ProQ/FINO family AM340_RS19780 PF12602 Fertility inhibition protein N terminal AM340_RS19795 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS19810 PF02525 Flavodoxin-like fold AM340_RS19815 PF11898 Domain of unknown function (DUF3418) AM340_RS19815 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM340_RS19815 PF00271 Helicase conserved C-terminal domain AM340_RS19815 PF04408 Helicase associated domain (HA2) AM340_RS19815 PF00270 DEAD/DEAH box helicase AM340_RS19820 PF02698 DUF218 domain AM340_RS19825 PF00171 Aldehyde dehydrogenase family AM340_RS19830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM340_RS19830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM340_RS19835 PF01292 Prokaryotic cytochrome b561 AM340_RS19840 PF01848 Hok/gef family AM340_RS19845 PF02203 Tar ligand binding domain homologue AM340_RS19845 PF00672 HAMP domain AM340_RS19845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM340_RS19850 PF03466 LysR substrate binding domain AM340_RS19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS19855 PF07063 Domain of unknown function (DUF1338) AM340_RS19865 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM340_RS19875 PF04325 Protein of unknown function (DUF465) AM340_RS19885 PF18836 Beta solenoid repeat from YDCK AM340_RS19890 PF03595 Voltage-dependent anion channel AM340_RS19895 PF03848 Tellurite resistance protein TehB AM340_RS19900 PF11769 Protein of unknown function (DUF3313) AM340_RS19905 PF03594 Benzoate membrane transport protein AM340_RS19910 PF07883 Cupin domain AM340_RS19910 PF01381 Helix-turn-helix AM340_RS19915 PF12392 Collagenase AM340_RS19915 PF01136 Peptidase family U32 AM340_RS19920 PF10829 Protein of unknown function (DUF2554) AM340_RS19925 PF00155 Aminotransferase class I and II AM340_RS19925 PF00392 Bacterial regulatory proteins, gntR family AM340_RS19930 PF13416 Bacterial extracellular solute-binding protein AM340_RS19935 PF08402 TOBE domain AM340_RS19935 PF00005 ABC transporter AM340_RS19940 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS19945 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS19950 PF00171 Aldehyde dehydrogenase family AM340_RS19965 PF10753 Toxin GhoT_OrtT AM340_RS19970 PF10735 Protein of unknown function (DUF2526) AM340_RS19975 PF04657 Putative inner membrane exporter, YdcZ AM340_RS19980 PF00583 Acetyltransferase (GNAT) family AM340_RS19990 PF16884 N-terminal domain of oxidoreductase AM340_RS19990 PF00107 Zinc-binding dehydrogenase AM340_RS19995 PF07729 FCD domain AM340_RS19995 PF00392 Bacterial regulatory proteins, gntR family AM340_RS20000 PF07715 TonB-dependent Receptor Plug Domain AM340_RS20000 PF00593 TonB dependent receptor AM340_RS20015 PF00324 Amino acid permease AM340_RS20020 PF13417 Glutathione S-transferase, N-terminal domain AM340_RS20025 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS20025 PF00563 EAL domain AM340_RS20025 PF00360 Phytochrome region AM340_RS20025 PF01590 GAF domain AM340_RS20030 PF14864 Alkyl sulfatase C-terminal AM340_RS20030 PF14863 Alkyl sulfatase dimerisation AM340_RS20030 PF00753 Metallo-beta-lactamase superfamily AM340_RS20035 PF01361 Tautomerase enzyme AM340_RS20040 PF01613 Flavin reductase like domain AM340_RS20045 PF00797 N-acetyltransferase AM340_RS20050 PF02567 Phenazine biosynthesis-like protein AM340_RS20055 PF02665 Nitrate reductase gamma subunit AM340_RS20060 PF02613 Nitrate reductase delta subunit AM340_RS20065 PF14711 Respiratory nitrate reductase beta C-terminal AM340_RS20065 PF13247 4Fe-4S dicluster domain AM340_RS20070 PF14710 Respiratory nitrate reductase alpha N-terminal AM340_RS20070 PF01568 Molydopterin dinucleotide binding domain AM340_RS20070 PF00384 Molybdopterin oxidoreductase AM340_RS20075 PF07690 Major Facilitator Superfamily AM340_RS20090 PF00267 Gram-negative porin AM340_RS20095 PF00892 EamA-like transporter family AM340_RS20100 PF00384 Molybdopterin oxidoreductase AM340_RS20100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM340_RS20100 PF01568 Molydopterin dinucleotide binding domain AM340_RS20105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM340_RS20105 PF01568 Molydopterin dinucleotide binding domain AM340_RS20105 PF00384 Molybdopterin oxidoreductase AM340_RS20110 PF09163 Formate dehydrogenase N, transmembrane AM340_RS20110 PF12800 4Fe-4S binding domain AM340_RS20110 PF13247 4Fe-4S dicluster domain AM340_RS20115 PF01292 Prokaryotic cytochrome b561 AM340_RS20120 PF01381 Helix-turn-helix AM340_RS20125 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AM340_RS20130 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS20130 PF00107 Zinc-binding dehydrogenase AM340_RS20135 PF00390 Malic enzyme, N-terminal domain AM340_RS20135 PF03949 Malic enzyme, NAD binding domain AM340_RS20140 PF08136 30S ribosomal protein subunit S22 family AM340_RS20145 PF10684 Putative biofilm-dependent modulation protein AM340_RS20150 PF02566 OsmC-like protein AM340_RS20155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM340_RS20155 PF00005 ABC transporter AM340_RS20160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM340_RS20160 PF00005 ABC transporter AM340_RS20165 PF12911 N-terminal TM domain of oligopeptide transport permease C AM340_RS20165 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS20170 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS20175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS20180 PF01427 D-ala-D-ala dipeptidase AM340_RS20190 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS20195 PF02638 Glycosyl hydrolase-like 10 AM340_RS20200 PF13520 Amino acid permease AM340_RS20205 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM340_RS20210 PF05193 Peptidase M16 inactive domain AM340_RS20210 PF00675 Insulinase (Peptidase family M16) AM340_RS20215 PF07715 TonB-dependent Receptor Plug Domain AM340_RS20220 PF00005 ABC transporter AM340_RS20220 PF06472 ABC transporter transmembrane region 2 AM340_RS20225 PF13186 Iron-sulfur cluster-binding domain AM340_RS20225 PF04055 Radical SAM superfamily AM340_RS20230 PF00884 Sulfatase AM340_RS20235 PF12833 Helix-turn-helix domain AM340_RS20240 PF17073 Two-component-system connector protein AM340_RS20245 PF00384 Molybdopterin oxidoreductase AM340_RS20250 PF09160 FimH, mannose binding AM340_RS20255 PF00419 Fimbrial protein AM340_RS20305 PF04198 Putative sugar-binding domain AM340_RS20315 PF02653 Branched-chain amino acid transport system / permease component AM340_RS20320 PF02653 Branched-chain amino acid transport system / permease component AM340_RS20325 PF13407 Periplasmic binding protein domain AM340_RS20330 PF01791 DeoC/LacD family aldolase AM340_RS20335 PF03992 Antibiotic biosynthesis monooxygenase AM340_RS20340 PF13649 Methyltransferase domain AM340_RS20345 PF01062 Bestrophin, RFP-TM, chloride channel AM340_RS20350 PF01232 Mannitol dehydrogenase Rossmann domain AM340_RS20350 PF08125 Mannitol dehydrogenase C-terminal domain AM340_RS20355 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS20365 PF13811 Domain of unknown function (DUF4186) AM340_RS20370 PF04960 Glutaminase AM340_RS20375 PF00171 Aldehyde dehydrogenase family AM340_RS20385 PF04606 Ogr/Delta-like zinc finger AM340_RS20425 PF07484 Phage Tail Collar Domain AM340_RS20430 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM340_RS20435 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM340_RS20445 PF00239 Resolvase, N terminal domain AM340_RS20445 PF02796 Helix-turn-helix domain of resolvase AM340_RS20575 PF07690 Major Facilitator Superfamily AM340_RS20580 PF01914 MarC family integral membrane protein AM340_RS20585 PF01047 MarR family AM340_RS20590 PF12833 Helix-turn-helix domain AM340_RS20595 PF13999 MarB protein AM340_RS20600 PF00232 Glycosyl hydrolase family 1 AM340_RS20605 PF02264 LamB porin AM340_RS20605 PF11471 Maltoporin periplasmic N-terminal extension AM340_RS20610 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM340_RS20615 PF02378 Phosphotransferase system, EIIC AM340_RS20620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS20625 PF07702 UTRA domain AM340_RS20625 PF00392 Bacterial regulatory proteins, gntR family AM340_RS20630 PF00892 EamA-like transporter family AM340_RS20635 PF07690 Major Facilitator Superfamily AM340_RS20645 PF01965 DJ-1/PfpI family AM340_RS20655 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS20660 PF04076 Bacterial OB fold (BOF) protein AM340_RS20670 PF01432 Peptidase family M3 AM340_RS20680 PF00106 short chain dehydrogenase AM340_RS20685 PF07729 FCD domain AM340_RS20685 PF00392 Bacterial regulatory proteins, gntR family AM340_RS20690 PF14001 YdfZ protein AM340_RS20695 PF01232 Mannitol dehydrogenase Rossmann domain AM340_RS20695 PF08125 Mannitol dehydrogenase C-terminal domain AM340_RS20705 PF07690 Major Facilitator Superfamily AM340_RS20705 PF00083 Sugar (and other) transporter AM340_RS20730 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS20755 PF00589 Phage integrase family AM340_RS20755 PF12167 Arm DNA-binding domain AM340_RS20765 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS20765 PF00107 Zinc-binding dehydrogenase AM340_RS20780 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM340_RS20785 PF06932 Protein of unknown function (DUF1283) AM340_RS20790 PF13302 Acetyltransferase (GNAT) domain AM340_RS20795 PF06788 Uncharacterised protein family (UPF0257) AM340_RS20800 PF06649 Protein of unknown function (DUF1161) AM340_RS20805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM340_RS20805 PF01568 Molydopterin dinucleotide binding domain AM340_RS20805 PF00384 Molybdopterin oxidoreductase AM340_RS20810 PF01568 Molydopterin dinucleotide binding domain AM340_RS20810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM340_RS20810 PF00384 Molybdopterin oxidoreductase AM340_RS20815 PF12800 4Fe-4S binding domain AM340_RS20815 PF13247 4Fe-4S dicluster domain AM340_RS20820 PF04976 DMSO reductase anchor subunit (DmsC) AM340_RS20825 PF02613 Nitrate reductase delta subunit AM340_RS20830 PF00654 Voltage gated chloride channel AM340_RS20840 PF00480 ROK family AM340_RS20845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS20845 PF03466 LysR substrate binding domain AM340_RS20850 PF07690 Major Facilitator Superfamily AM340_RS20870 PF00089 Trypsin AM340_RS20875 PF00893 Small Multidrug Resistance protein AM340_RS20880 PF00893 Small Multidrug Resistance protein AM340_RS20890 PF01594 AI-2E family transporter AM340_RS20895 PF02233 NAD(P) transhydrogenase beta subunit AM340_RS20900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM340_RS20900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM340_RS20900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM340_RS20905 PF07338 Protein of unknown function (DUF1471) AM340_RS20910 PF13520 Amino acid permease AM340_RS20920 PF06942 GlpM protein AM340_RS20925 PF00486 Transcriptional regulatory protein, C terminal AM340_RS20925 PF00072 Response regulator receiver domain AM340_RS20930 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS20930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS20930 PF00672 HAMP domain AM340_RS20935 PF05472 DNA replication terminus site-binding protein (Ter protein) AM340_RS20940 PF10415 Fumarase C C-terminus AM340_RS20940 PF00206 Lyase AM340_RS20945 PF05681 Fumarate hydratase (Fumerase) AM340_RS20945 PF05683 Fumarase C-terminus AM340_RS20950 PF01238 Phosphomannose isomerase type I AM340_RS20955 PF06097 Bacterial protein of unknown function (DUF945) AM340_RS20960 PF03573 outer membrane porin, OprD family AM340_RS20970 PF00703 Glycosyl hydrolases family 2 AM340_RS20970 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM340_RS20970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM340_RS20975 PF00440 Bacterial regulatory proteins, tetR family AM340_RS20985 PF01609 Transposase DDE domain AM340_RS20985 PF13006 Insertion element 4 transposase N-terminal AM340_RS20990 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM340_RS20990 PF00356 Bacterial regulatory proteins, lacI family AM340_RS20995 PF00367 phosphotransferase system, EIIB AM340_RS20995 PF02378 Phosphotransferase system, EIIC AM340_RS21000 PF00155 Aminotransferase class I and II AM340_RS21005 PF00962 Adenosine/AMP deaminase AM340_RS21010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM340_RS21010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM340_RS21025 PF05321 Haemolysin expression modulating protein AM340_RS21030 PF10754 Protein of unknown function (DUF2569) AM340_RS21035 PF02508 Rnf-Nqr subunit, membrane protein AM340_RS21040 PF04060 Putative Fe-S cluster AM340_RS21045 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM340_RS21045 PF12838 4Fe-4S dicluster domain AM340_RS21045 PF13375 RnfC Barrel sandwich hybrid domain AM340_RS21045 PF10531 SLBB domain AM340_RS21050 PF03116 NQR2, RnfD, RnfE family AM340_RS21055 PF04205 FMN-binding domain AM340_RS21060 PF02508 Rnf-Nqr subunit, membrane protein AM340_RS21065 PF00633 Helix-hairpin-helix motif AM340_RS21065 PF10576 Iron-sulfur binding domain of endonuclease III AM340_RS21065 PF00730 HhH-GPD superfamily base excision DNA repair protein AM340_RS21075 PF00854 POT family AM340_RS21080 PF02798 Glutathione S-transferase, N-terminal domain AM340_RS21080 PF00043 Glutathione S-transferase, C-terminal domain AM340_RS21085 PF08543 Phosphomethylpyrimidine kinase AM340_RS21090 PF00579 tRNA synthetases class I (W and Y) AM340_RS21090 PF01479 S4 domain AM340_RS21095 PF01243 Pyridoxamine 5'-phosphate oxidase AM340_RS21095 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM340_RS21100 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AM340_RS21105 PF03702 Anhydro-N-acetylmuramic acid kinase AM340_RS21110 PF05433 Glycine zipper 2TM domain AM340_RS21115 PF01047 MarR family AM340_RS21120 PF07869 Protein of unknown function (DUF1656) AM340_RS21125 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS21125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS21130 PF04632 Fusaric acid resistance protein family AM340_RS21135 PF00080 Copper/zinc superoxide dismutase (SODC) AM340_RS21140 PF00248 Aldo/keto reductase family AM340_RS21145 PF06945 Protein of unknown function (DUF1289) AM340_RS21150 PF00440 Bacterial regulatory proteins, tetR family AM340_RS21150 PF16925 Tetracyclin repressor-like, C-terminal domain AM340_RS21155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM340_RS21160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM340_RS21165 PF00929 Exonuclease AM340_RS21170 PF00270 DEAD/DEAH box helicase AM340_RS21170 PF00271 Helicase conserved C-terminal domain AM340_RS21170 PF08494 DEAD/H associated AM340_RS21175 PF00462 Glutaredoxin AM340_RS21180 PF00877 NlpC/P60 family AM340_RS21185 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM340_RS21185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM340_RS21190 PF07690 Major Facilitator Superfamily AM340_RS21200 PF00356 Bacterial regulatory proteins, lacI family AM340_RS21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS21205 PF03466 LysR substrate binding domain AM340_RS21210 PF07690 Major Facilitator Superfamily AM340_RS21220 PF00677 Lumazine binding domain AM340_RS21225 PF01554 MatE AM340_RS21255 PF08803 Putative mono-oxygenase ydhR AM340_RS21260 PF13454 FAD-NAD(P)-binding AM340_RS21270 PF01292 Prokaryotic cytochrome b561 AM340_RS21275 PF13247 4Fe-4S dicluster domain AM340_RS21285 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AM340_RS21285 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AM340_RS21290 PF12800 4Fe-4S binding domain AM340_RS21290 PF13247 4Fe-4S dicluster domain AM340_RS21295 PF10965 Protein of unknown function (DUF2767) AM340_RS21300 PF02887 Pyruvate kinase, alpha/beta domain AM340_RS21300 PF00224 Pyruvate kinase, barrel domain AM340_RS21305 PF04728 Lipoprotein leucine-zipper AM340_RS21310 PF03734 L,D-transpeptidase catalytic domain AM340_RS21310 PF01476 LysM domain AM340_RS21310 PF17969 L,D-transpeptidase C-terminal domain AM340_RS21315 PF02657 Fe-S metabolism associated domain AM340_RS21320 PF00266 Aminotransferase class-V AM340_RS21325 PF01458 Uncharacterized protein family (UPF0051) AM340_RS21330 PF00005 ABC transporter AM340_RS21335 PF01458 Uncharacterized protein family (UPF0051) AM340_RS21340 PF01521 Iron-sulphur cluster biosynthesis AM340_RS21345 PF15930 Domain of unknown function AM340_RS21350 PF03061 Thioesterase superfamily AM340_RS21355 PF13183 4Fe-4S dicluster domain AM340_RS21355 PF02913 FAD linked oxidases, C-terminal domain AM340_RS21355 PF01565 FAD binding domain AM340_RS21365 PF01594 AI-2E family transporter AM340_RS21375 PF08965 Domain of unknown function (DUF1870) AM340_RS21380 PF07690 Major Facilitator Superfamily AM340_RS21385 PF07690 Major Facilitator Superfamily AM340_RS21390 PF08501 Shikimate dehydrogenase substrate binding domain AM340_RS21390 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM340_RS21395 PF01487 Type I 3-dehydroquinase AM340_RS21400 PF01144 Coenzyme A transferase AM340_RS21405 PF02770 Acyl-CoA dehydrogenase, middle domain AM340_RS21405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM340_RS21405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM340_RS21410 PF12833 Helix-turn-helix domain AM340_RS21410 PF02311 AraC-like ligand binding domain AM340_RS21420 PF01012 Electron transfer flavoprotein domain AM340_RS21425 PF01012 Electron transfer flavoprotein domain AM340_RS21425 PF00766 Electron transfer flavoprotein FAD-binding domain AM340_RS21430 PF01494 FAD binding domain AM340_RS21440 PF13193 AMP-binding enzyme C-terminal domain AM340_RS21440 PF00501 AMP-binding enzyme AM340_RS21455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM340_RS21455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM340_RS21460 PF00939 Sodium:sulfate symporter transmembrane region AM340_RS21465 PF00391 PEP-utilising enzyme, mobile domain AM340_RS21465 PF02896 PEP-utilising enzyme, TIM barrel domain AM340_RS21465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM340_RS21475 PF03618 Kinase/pyrophosphorylase AM340_RS21480 PF00793 DAHP synthetase I family AM340_RS21485 PF10636 Hemin uptake protein hemP AM340_RS21490 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM340_RS21495 PF00563 EAL domain AM340_RS21500 PF00877 NlpC/P60 family AM340_RS21505 PF00005 ABC transporter AM340_RS21510 PF00255 Glutathione peroxidase AM340_RS21515 PF01032 FecCD transport family AM340_RS21520 PF00216 Bacterial DNA-binding protein AM340_RS21525 PF01588 Putative tRNA binding domain AM340_RS21525 PF03147 Ferredoxin-fold anticodon binding domain AM340_RS21525 PF03484 tRNA synthetase B5 domain AM340_RS21525 PF03483 B3/4 domain AM340_RS21525 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM340_RS21530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM340_RS21530 PF01409 tRNA synthetases class II core domain (F) AM340_RS21540 PF00453 Ribosomal protein L20 AM340_RS21545 PF01632 Ribosomal protein L35 AM340_RS21550 PF05198 Translation initiation factor IF-3, N-terminal domain AM340_RS21550 PF00707 Translation initiation factor IF-3, C-terminal domain AM340_RS21555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM340_RS21555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM340_RS21555 PF03129 Anticodon binding domain AM340_RS21555 PF02824 TGS domain AM340_RS21570 PF04338 Protein of unknown function, DUF481 AM340_RS21575 PF00294 pfkB family carbohydrate kinase AM340_RS21580 PF11080 Endoribonuclease GhoS AM340_RS21585 PF03881 Fructosamine kinase AM340_RS21590 PF14002 YniB-like protein AM340_RS21595 PF13419 Haloacid dehalogenase-like hydrolase AM340_RS21600 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM340_RS21605 PF00375 Sodium:dicarboxylate symporter family AM340_RS21615 PF10729 Cell division activator CedA AM340_RS21620 PF18011 C-terminal domain found in long catalases AM340_RS21620 PF00199 Catalase AM340_RS21620 PF06628 Catalase-related immune-responsive AM340_RS21630 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM340_RS21630 PF02056 Family 4 glycosyl hydrolase AM340_RS21635 PF07883 Cupin domain AM340_RS21635 PF12833 Helix-turn-helix domain AM340_RS21640 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM340_RS21645 PF02378 Phosphotransferase system, EIIC AM340_RS21650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS21660 PF04355 SmpA / OmlA family AM340_RS21665 PF02540 NAD synthase AM340_RS21675 PF05962 HutD AM340_RS21680 PF07813 LTXXQ motif family protein AM340_RS21685 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM340_RS21690 PF04996 Succinylarginine dihydrolase AM340_RS21695 PF00171 Aldehyde dehydrogenase family AM340_RS21700 PF04958 Arginine N-succinyltransferase beta subunit AM340_RS21705 PF00202 Aminotransferase class-III AM340_RS21715 PF03372 Endonuclease/Exonuclease/phosphatase family AM340_RS21720 PF09335 SNARE associated Golgi protein AM340_RS21730 PF09335 SNARE associated Golgi protein AM340_RS21735 PF02627 Carboxymuconolactone decarboxylase family AM340_RS21740 PF13416 Bacterial extracellular solute-binding protein AM340_RS21745 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS21750 PF00005 ABC transporter AM340_RS21755 PF00581 Rhodanese-like domain AM340_RS21760 PF01066 CDP-alcohol phosphatidyltransferase AM340_RS21765 PF00293 NUDIX domain AM340_RS21770 PF07383 Protein of unknown function (DUF1496) AM340_RS21775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM340_RS21775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM340_RS21780 PF01751 Toprim domain AM340_RS21780 PF01131 DNA topoisomerase AM340_RS21785 PF00586 AIR synthase related protein, N-terminal domain AM340_RS21785 PF02769 AIR synthase related protein, C-terminal domain AM340_RS21795 PF00881 Nitroreductase family AM340_RS21805 PF01343 Peptidase family S49 AM340_RS21810 PF00710 Asparaginase, N-terminal AM340_RS21810 PF17763 Glutaminase/Asparaginase C-terminal domain AM340_RS21815 PF00857 Isochorismatase family AM340_RS21820 PF00083 Sugar (and other) transporter AM340_RS21825 PF08220 DeoR-like helix-turn-helix domain AM340_RS21825 PF00455 DeoR C terminal sensor domain AM340_RS21830 PF00248 Aldo/keto reductase family AM340_RS21835 PF00294 pfkB family carbohydrate kinase AM340_RS21840 PF01116 Fructose-bisphosphate aldolase class-II AM340_RS21845 PF00107 Zinc-binding dehydrogenase AM340_RS21845 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS21850 PF00083 Sugar (and other) transporter AM340_RS21855 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS21855 PF00107 Zinc-binding dehydrogenase AM340_RS21860 PF07023 Protein of unknown function (DUF1315) AM340_RS21865 PF01641 SelR domain AM340_RS21870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM340_RS21870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM340_RS21875 PF01263 Aldose 1-epimerase AM340_RS21880 PF00248 Aldo/keto reductase family AM340_RS21885 PF06629 MltA-interacting protein MipA AM340_RS21890 PF06798 PrkA serine protein kinase C-terminal domain AM340_RS21890 PF08298 PrkA AAA domain AM340_RS21895 PF04285 Protein of unknown function (DUF444) AM340_RS21900 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS21900 PF17158 Membrane-associated sensor, integral membrane domain AM340_RS21905 PF17155 Gammaproteobacterial periplasmic sensor domain AM340_RS21905 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS21910 PF04073 Aminoacyl-tRNA editing domain AM340_RS21920 PF04284 Protein of unknown function (DUF441) AM340_RS21925 PF02311 AraC-like ligand binding domain AM340_RS21925 PF12833 Helix-turn-helix domain AM340_RS21930 PF07690 Major Facilitator Superfamily AM340_RS21935 PF04343 Protein of unknown function, DUF488 AM340_RS21940 PF03891 Domain of unknown function (DUF333) AM340_RS21945 PF13185 GAF domain AM340_RS21945 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS21960 PF04226 Transglycosylase associated protein AM340_RS21965 PF08956 Domain of unknown function (DUF1869) AM340_RS21970 PF09313 Domain of unknown function (DUF1971) AM340_RS21975 PF01810 LysE type translocator AM340_RS21980 PF03466 LysR substrate binding domain AM340_RS21980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS21985 PF00180 Isocitrate/isopropylmalate dehydrogenase AM340_RS21990 PF02028 BCCT, betaine/carnitine/choline family transporter AM340_RS21995 PF00355 Rieske [2Fe-2S] domain AM340_RS21995 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM340_RS22000 PF00970 Oxidoreductase FAD-binding domain AM340_RS22000 PF00175 Oxidoreductase NAD-binding domain AM340_RS22000 PF00111 2Fe-2S iron-sulfur cluster binding domain AM340_RS22005 PF00570 HRDC domain AM340_RS22005 PF01612 3'-5' exonuclease AM340_RS22010 PF13193 AMP-binding enzyme C-terminal domain AM340_RS22010 PF00501 AMP-binding enzyme AM340_RS22015 PF03843 Outer membrane lipoprotein Slp family AM340_RS22020 PF00814 Glycoprotease family AM340_RS22025 PF04851 Type III restriction enzyme, res subunit AM340_RS22025 PF13307 Helicase C-terminal domain AM340_RS22030 PF01042 Endoribonuclease L-PSP AM340_RS22040 PF03701 Uncharacterised protein family (UPF0181) AM340_RS22045 PF04715 Anthranilate synthase component I, N terminal region AM340_RS22045 PF00425 chorismate binding enzyme AM340_RS22050 PF00293 NUDIX domain AM340_RS22055 PF03313 Serine dehydratase alpha chain AM340_RS22055 PF03315 Serine dehydratase beta chain AM340_RS22060 PF12792 CSS motif domain associated with EAL AM340_RS22060 PF00563 EAL domain AM340_RS22065 PF03471 Transporter associated domain AM340_RS22065 PF03741 Integral membrane protein TerC family AM340_RS22075 PF03610 PTS system fructose IIA component AM340_RS22075 PF03830 PTS system sorbose subfamily IIB component AM340_RS22080 PF03609 PTS system sorbose-specific iic component AM340_RS22085 PF03613 PTS system mannose/fructose/sorbose family IID component AM340_RS22090 PF06173 Protein of unknown function (DUF986) AM340_RS22100 PF02659 Putative manganese efflux pump AM340_RS22105 PF13847 Methyltransferase domain AM340_RS22110 PF00313 'Cold-shock' DNA-binding domain AM340_RS22115 PF10736 Protein of unknown function (DUF2627) AM340_RS22120 PF13974 YebO-like protein AM340_RS22125 PF13998 MgrB protein AM340_RS22130 PF13996 YobH-like protein AM340_RS22135 PF09339 IclR helix-turn-helix domain AM340_RS22135 PF01614 Bacterial transcriptional regulator AM340_RS22140 PF07690 Major Facilitator Superfamily AM340_RS22145 PF01435 Peptidase family M48 AM340_RS22150 PF03572 Peptidase family S41 AM340_RS22150 PF00595 PDZ domain AM340_RS22150 PF17804 Tail specific protease N-terminal domain AM340_RS22150 PF11818 C-terminal domain of tail specific protease (DUF3340) AM340_RS22155 PF17516 ProQ C-terminal domain AM340_RS22155 PF04352 ProQ/FINO family AM340_RS22160 PF13185 GAF domain AM340_RS22165 PF04403 Paraquat-inducible protein A AM340_RS22170 PF02470 MlaD protein AM340_RS22175 PF01189 16S rRNA methyltransferase RsmB/F AM340_RS22175 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AM340_RS22175 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AM340_RS22180 PF07351 Protein of unknown function (DUF1480) AM340_RS22185 PF07358 Protein of unknown function (DUF1482) AM340_RS22190 PF00149 Calcineurin-like phosphoesterase AM340_RS22195 PF10709 Protein of unknown function (DUF2511) AM340_RS22200 PF05425 Copper resistance protein D AM340_RS22205 PF04234 CopC domain AM340_RS22210 PF06440 DNA polymerase III, theta subunit AM340_RS22215 PF00795 Carbon-nitrogen hydrolase AM340_RS22220 PF00929 Exonuclease AM340_RS22225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM340_RS22225 PF00326 Prolyl oligopeptidase family AM340_RS22230 PF04391 Protein of unknown function (DUF533) AM340_RS22235 PF13995 YebF-like protein AM340_RS22240 PF07130 YebG protein AM340_RS22245 PF02222 ATP-grasp domain AM340_RS22250 PF01081 KDPG and KHG aldolase AM340_RS22255 PF00920 Dehydratase family AM340_RS22260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM340_RS22260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM340_RS22265 PF01380 SIS domain AM340_RS22265 PF01418 Helix-turn-helix domain, rpiR family AM340_RS22270 PF02887 Pyruvate kinase, alpha/beta domain AM340_RS22270 PF00224 Pyruvate kinase, barrel domain AM340_RS22275 PF03279 Bacterial lipid A biosynthesis acyltransferase AM340_RS22280 PF08525 Opacity-associated protein A N-terminal motif AM340_RS22280 PF01551 Peptidase family M23 AM340_RS22280 PF01476 LysM domain AM340_RS22285 PF01297 Zinc-uptake complex component A periplasmic AM340_RS22290 PF00005 ABC transporter AM340_RS22295 PF00950 ABC 3 transport family AM340_RS22300 PF05491 RuvB C-terminal winged helix domain AM340_RS22300 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM340_RS22300 PF17864 RuvB AAA lid domain AM340_RS22305 PF07499 RuvA, C-terminal domain AM340_RS22305 PF01330 RuvA N terminal domain AM340_RS22315 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM340_RS22320 PF02075 Crossover junction endodeoxyribonuclease RuvC AM340_RS22325 PF01709 Transcriptional regulator AM340_RS22330 PF00293 NUDIX domain AM340_RS22335 PF02938 GAD domain AM340_RS22335 PF00152 tRNA synthetases class II (D, K and N) AM340_RS22335 PF01336 OB-fold nucleic acid binding domain AM340_RS22340 PF00857 Isochorismatase family AM340_RS22345 PF06183 DinI-like family AM340_RS22360 PF07484 Phage Tail Collar Domain AM340_RS22360 PF03335 Phage tail fibre repeat AM340_RS22360 PF08400 Prophage tail fibre N-terminal AM340_RS22365 PF06316 Enterobacterial Ail/Lom protein AM340_RS22435 PF00574 Clp protease AM340_RS22475 PF06085 Lipoprotein Rz1 precursor AM340_RS22480 PF00959 Phage lysozyme AM340_RS22490 PF07041 Protein of unknown function (DUF1327) AM340_RS22495 PF04971 Bacteriophage P21 holin S AM340_RS22510 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase AM340_RS22530 PF12833 Helix-turn-helix domain AM340_RS22540 PF06530 Phage antitermination protein Q AM340_RS22545 PF06147 Protein of unknown function (DUF968) AM340_RS22555 PF05866 Endodeoxyribonuclease RusA AM340_RS22560 PF05869 DNA N-6-adenine-methyltransferase (Dam) AM340_RS22565 PF06069 PerC transcriptional activator AM340_RS22575 PF09669 Phage regulatory protein Rha (Phage_pRha) AM340_RS22575 PF10549 ORF11CD3 domain AM340_RS22595 PF00717 Peptidase S24-like AM340_RS22595 PF01381 Helix-turn-helix AM340_RS22615 PF10065 Uncharacterized conserved protein (DUF2303) AM340_RS22680 PF00589 Phage integrase family AM340_RS22680 PF12167 Arm DNA-binding domain AM340_RS22685 PF01904 Protein of unknown function DUF72 AM340_RS22690 PF01124 MAPEG family AM340_RS22695 PF13649 Methyltransferase domain AM340_RS22700 PF08003 Protein of unknown function (DUF1698) AM340_RS22705 PF18364 Molybdopterin oxidoreductase N-terminal domain AM340_RS22705 PF01568 Molydopterin dinucleotide binding domain AM340_RS22705 PF00384 Molybdopterin oxidoreductase AM340_RS22710 PF03264 NapC/NirT cytochrome c family, N-terminal region AM340_RS22715 PF03932 CutC family AM340_RS22720 PF06185 YecM protein AM340_RS22730 PF00750 tRNA synthetases class I (R) AM340_RS22730 PF03485 Arginyl tRNA synthetase N terminal domain AM340_RS22730 PF05746 DALR anticodon binding domain AM340_RS22735 PF06366 Flagellar protein FlhE AM340_RS22740 PF00771 FHIPEP family AM340_RS22745 PF01312 FlhB HrpN YscU SpaS Family AM340_RS22750 PF04344 Chemotaxis phosphatase, CheZ AM340_RS22755 PF00072 Response regulator receiver domain AM340_RS22760 PF00072 Response regulator receiver domain AM340_RS22760 PF01339 CheB methylesterase AM340_RS22765 PF01739 CheR methyltransferase, SAM binding domain AM340_RS22765 PF03705 CheR methyltransferase, all-alpha domain AM340_RS22775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM340_RS22775 PF02203 Tar ligand binding domain homologue AM340_RS22775 PF00672 HAMP domain AM340_RS22780 PF01584 CheW-like domain AM340_RS22785 PF02895 Signal transducing histidine kinase, homodimeric domain AM340_RS22785 PF01584 CheW-like domain AM340_RS22785 PF01627 Hpt domain AM340_RS22785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS22785 PF09078 CheY binding AM340_RS22790 PF00691 OmpA family AM340_RS22790 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM340_RS22795 PF01618 MotA/TolQ/ExbB proton channel family AM340_RS22800 PF05280 Flagellar transcriptional activator (FlhC) AM340_RS22805 PF05247 Flagellar transcriptional activator (FlhD) AM340_RS22810 PF00582 Universal stress protein family AM340_RS22815 PF00982 Glycosyltransferase family 20 AM340_RS22820 PF02358 Trehalose-phosphatase AM340_RS22825 PF02653 Branched-chain amino acid transport system / permease component AM340_RS22830 PF00005 ABC transporter AM340_RS22835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM340_RS22845 PF00210 Ferritin-like domain AM340_RS22850 PF10964 Protein of unknown function (DUF2766) AM340_RS22865 PF13992 YecR-like lipoprotein AM340_RS22870 PF00210 Ferritin-like domain AM340_RS22875 PF10678 Protein of unknown function (DUF2492) AM340_RS22880 PF03222 Tryptophan/tyrosine permease family AM340_RS22885 PF03695 Uncharacterised protein family (UPF0149) AM340_RS22885 PF02810 SEC-C motif AM340_RS22890 PF00589 Phage integrase family AM340_RS22890 PF02899 Phage integrase, N-terminal SAM-like domain AM340_RS22970 PF05840 Bacteriophage replication gene A protein (GPA) AM340_RS23035 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase AM340_RS23070 PF07484 Phage Tail Collar Domain AM340_RS23075 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM340_RS23080 PF07484 Phage Tail Collar Domain AM340_RS23085 PF02796 Helix-turn-helix domain of resolvase AM340_RS23085 PF00239 Resolvase, N terminal domain AM340_RS23115 PF04984 Phage tail sheath protein subtilisin-like domain AM340_RS23115 PF17482 Phage tail sheath C-terminal domain AM340_RS23155 PF01066 CDP-alcohol phosphatidyltransferase AM340_RS23160 PF02151 UvrB/uvrC motif AM340_RS23160 PF01541 GIY-YIG catalytic domain AM340_RS23160 PF08459 UvrC Helix-hairpin-helix N-terminal AM340_RS23165 PF00072 Response regulator receiver domain AM340_RS23165 PF00196 Bacterial regulatory proteins, luxR family AM340_RS23170 PF10769 Protein of unknown function (DUF2594) AM340_RS23175 PF00196 Bacterial regulatory proteins, luxR family AM340_RS23175 PF03472 Autoinducer binding domain AM340_RS23180 PF00005 ABC transporter AM340_RS23185 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS23190 PF00291 Pyridoxal-phosphate dependent enzyme AM340_RS23195 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS23200 PF02899 Phage integrase, N-terminal SAM-like domain AM340_RS23205 PF04542 Sigma-70 region 2 AM340_RS23205 PF04545 Sigma-70, region 4 AM340_RS23205 PF04539 Sigma-70 region 3 AM340_RS23210 PF00700 Bacterial flagellin C-terminal helical region AM340_RS23210 PF00669 Bacterial flagellin N-terminal helical region AM340_RS23210 PF12445 Flagellin protein AM340_RS23230 PF02465 Flagellar hook-associated protein 2 N-terminus AM340_RS23230 PF07195 Flagellar hook-associated protein 2 C-terminus AM340_RS23235 PF02561 Flagellar protein FliS AM340_RS23240 PF05400 Flagellar protein FliT AM340_RS23245 PF00128 Alpha amylase, catalytic domain AM340_RS23245 PF02806 Alpha amylase, C-terminal all-beta domain AM340_RS23250 PF13987 YedD-like protein AM340_RS23260 PF04143 Sulphur transport AM340_RS23265 PF01206 Sulfurtransferase TusA AM340_RS23270 PF02586 SOS response associated peptidase (SRAP) AM340_RS23275 PF00583 Acetyltransferase (GNAT) family AM340_RS23285 PF02049 Flagellar hook-basal body complex protein FliE AM340_RS23290 PF01514 Secretory protein of YscJ/FliF family AM340_RS23290 PF08345 Flagellar M-ring protein C-terminal AM340_RS23295 PF14842 FliG N-terminal domain AM340_RS23295 PF14841 FliG middle domain AM340_RS23295 PF01706 FliG C-terminal domain AM340_RS23300 PF02108 Flagellar assembly protein FliH AM340_RS23305 PF18269 T3SS EscN ATPase C-terminal domain AM340_RS23305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM340_RS23310 PF02050 Flagellar FliJ protein AM340_RS23315 PF02120 Flagellar hook-length control protein FliK AM340_RS23320 PF03748 Flagellar basal body-associated protein FliL AM340_RS23325 PF02154 Flagellar motor switch protein FliM AM340_RS23325 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM340_RS23330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM340_RS23330 PF16973 Flagellar motor switch protein FliN N-terminal AM340_RS23335 PF04347 Flagellar biosynthesis protein, FliO AM340_RS23340 PF00813 FliP family AM340_RS23345 PF01313 Bacterial export proteins, family 3 AM340_RS23355 PF00196 Bacterial regulatory proteins, luxR family AM340_RS23360 PF10781 Dextransucrase DSRB AM340_RS23370 PF10733 Protein of unknown function (DUF2525) AM340_RS23380 PF17151 Periplasmic sensor domain AM340_RS23380 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS23390 PF09926 Uncharacterized small protein (DUF2158) AM340_RS23395 PF05661 Protein of unknown function (DUF808) AM340_RS23400 PF00892 EamA-like transporter family AM340_RS23405 PF03852 DNA mismatch endonuclease Vsr AM340_RS23410 PF18284 DNA methylase N-terminal domain AM340_RS23410 PF00145 C-5 cytosine-specific DNA methylase AM340_RS23415 PF01966 HD domain AM340_RS23425 PF00267 Gram-negative porin AM340_RS23440 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS23440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS23445 PF00072 Response regulator receiver domain AM340_RS23445 PF00486 Transcriptional regulatory protein, C terminal AM340_RS23450 PF00576 HIUase/Transthyretin family AM340_RS23455 PF00174 Oxidoreductase molybdopterin binding domain AM340_RS23460 PF01794 Ferric reductase like transmembrane component AM340_RS23465 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM340_RS23495 PF08400 Prophage tail fibre N-terminal AM340_RS23495 PF03335 Phage tail fibre repeat AM340_RS23495 PF07484 Phage Tail Collar Domain AM340_RS23500 PF06316 Enterobacterial Ail/Lom protein AM340_RS23570 PF03864 Phage major capsid protein E AM340_RS23580 PF01343 Peptidase family S49 AM340_RS23590 PF02831 gpW AM340_RS23595 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM340_RS23600 PF07471 Phage DNA packaging protein Nu1 AM340_RS23620 PF03245 Bacteriophage Rz lysis protein AM340_RS23630 PF00959 Phage lysozyme AM340_RS23635 PF07041 Protein of unknown function (DUF1327) AM340_RS23640 PF04971 Bacteriophage P21 holin S AM340_RS23655 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase AM340_RS23675 PF03589 Antitermination protein AM340_RS23680 PF05866 Endodeoxyribonuclease RusA AM340_RS23685 PF06147 Protein of unknown function (DUF968) AM340_RS23700 PF01848 Hok/gef family AM340_RS23745 PF07789 Protein of unknown function (DUF1627) AM340_RS23765 PF01381 Helix-turn-helix AM340_RS23770 PF07151 Protein of unknown function (DUF1391) AM340_RS23785 PF05358 DicB protein AM340_RS23790 PF07358 Protein of unknown function (DUF1482) AM340_RS23815 PF06167 Glucose-regulated metallo-peptidase M90 AM340_RS23825 PF00589 Phage integrase family AM340_RS23825 PF13356 Arm DNA-binding domain AM340_RS23830 PF00425 chorismate binding enzyme AM340_RS23835 PF07690 Major Facilitator Superfamily AM340_RS23840 PF00005 ABC transporter AM340_RS23840 PF00664 ABC transporter transmembrane region AM340_RS23845 PF00005 ABC transporter AM340_RS23845 PF04954 Siderophore-interacting protein AM340_RS23845 PF08021 Siderophore-interacting FAD-binding domain AM340_RS23845 PF00664 ABC transporter transmembrane region AM340_RS23855 PF00550 Phosphopantetheine attachment site AM340_RS23855 PF08242 Methyltransferase domain AM340_RS23855 PF00668 Condensation domain AM340_RS23855 PF00501 AMP-binding enzyme AM340_RS23860 PF02801 Beta-ketoacyl synthase, C-terminal domain AM340_RS23860 PF00698 Acyl transferase domain AM340_RS23860 PF00668 Condensation domain AM340_RS23860 PF16197 Ketoacyl-synthetase C-terminal extension AM340_RS23860 PF00109 Beta-ketoacyl synthase, N-terminal domain AM340_RS23860 PF00550 Phosphopantetheine attachment site AM340_RS23870 PF00975 Thioesterase domain AM340_RS23875 PF13193 AMP-binding enzyme C-terminal domain AM340_RS23875 PF00501 AMP-binding enzyme AM340_RS23880 PF00593 TonB dependent receptor AM340_RS23880 PF07715 TonB-dependent Receptor Plug Domain AM340_RS23885 PF11924 Inverse autotransporter, beta-domain AM340_RS23885 PF09134 Invasin, domain 3 AM340_RS23885 PF02369 Bacterial Ig-like domain (group 1) AM340_RS23890 PF02369 Bacterial Ig-like domain (group 1) AM340_RS23890 PF09134 Invasin, domain 3 AM340_RS23890 PF11924 Inverse autotransporter, beta-domain AM340_RS23895 PF02369 Bacterial Ig-like domain (group 1) AM340_RS23895 PF09134 Invasin, domain 3 AM340_RS23895 PF11924 Inverse autotransporter, beta-domain AM340_RS23900 PF09134 Invasin, domain 3 AM340_RS23900 PF11924 Inverse autotransporter, beta-domain AM340_RS23900 PF02369 Bacterial Ig-like domain (group 1) AM340_RS23910 PF07690 Major Facilitator Superfamily AM340_RS23910 PF00083 Sugar (and other) transporter AM340_RS23915 PF01048 Phosphorylase superfamily AM340_RS23915 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM340_RS23920 PF01709 Transcriptional regulator AM340_RS23935 PF01554 MatE AM340_RS23945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS23945 PF03466 LysR substrate binding domain AM340_RS23950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS23950 PF03466 LysR substrate binding domain AM340_RS23960 PF17969 L,D-transpeptidase C-terminal domain AM340_RS23960 PF03734 L,D-transpeptidase catalytic domain AM340_RS23965 PF02277 Phosphoribosyltransferase AM340_RS23970 PF02654 Cobalamin-5-phosphate synthase AM340_RS23975 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM340_RS23995 PF07715 TonB-dependent Receptor Plug Domain AM340_RS24000 PF02195 ParB-like nuclease domain AM340_RS24005 PF01507 Phosphoadenosine phosphosulfate reductase family AM340_RS24005 PF11922 Domain of unknown function (DUF3440) AM340_RS24015 PF00535 Glycosyl transferase family 2 AM340_RS24020 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS24035 PF00294 pfkB family carbohydrate kinase AM340_RS24060 PF02126 Phosphotriesterase family AM340_RS24075 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS24100 PF06006 Bacterial protein of unknown function (DUF905) AM340_RS24110 PF06067 Domain of unknown function (DUF932) AM340_RS24115 PF03230 Antirestriction protein AM340_RS24120 PF04002 RadC-like JAB domain AM340_RS24125 PF06174 Protein of unknown function (DUF987) AM340_RS24160 PF04363 Protein of unknown function (DUF496) AM340_RS24165 PF04632 Fusaric acid resistance protein family AM340_RS24170 PF06445 GyrI-like small molecule binding domain AM340_RS24180 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM340_RS24180 PF13542 Helix-turn-helix domain of transposase family ISL3 AM340_RS24180 PF01610 Transposase AM340_RS24185 PF00768 D-alanyl-D-alanine carboxypeptidase AM340_RS24185 PF07943 Penicillin-binding protein 5, C-terminal domain AM340_RS24190 PF00929 Exonuclease AM340_RS24190 PF08411 Exonuclease C-terminal AM340_RS24195 PF01206 Sulfurtransferase TusA AM340_RS24200 PF04143 Sulphur transport AM340_RS24205 PF13520 Amino acid permease AM340_RS24215 PF03466 LysR substrate binding domain AM340_RS24215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS24220 PF01370 NAD dependent epimerase/dehydratase family AM340_RS24235 PF08029 HisG, C-terminal domain AM340_RS24235 PF01634 ATP phosphoribosyltransferase AM340_RS24240 PF00815 Histidinol dehydrogenase AM340_RS24245 PF00155 Aminotransferase class I and II AM340_RS24250 PF00475 Imidazoleglycerol-phosphate dehydratase AM340_RS24255 PF00117 Glutamine amidotransferase class-I AM340_RS24260 PF00977 Histidine biosynthesis protein AM340_RS24265 PF00977 Histidine biosynthesis protein AM340_RS24270 PF01502 Phosphoribosyl-AMP cyclohydrolase AM340_RS24270 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM340_RS24275 PF02706 Chain length determinant protein AM340_RS24280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM340_RS24280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM340_RS24280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM340_RS24285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM340_RS24285 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM340_RS24290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM340_RS24290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM340_RS24290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM340_RS24290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM340_RS24295 PF01050 Mannose-6-phosphate isomerase AM340_RS24295 PF00483 Nucleotidyl transferase AM340_RS24300 PF00535 Glycosyl transferase family 2 AM340_RS24325 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS24330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM340_RS24335 PF01943 Polysaccharide biosynthesis protein AM340_RS24340 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AM340_RS24345 PF00483 Nucleotidyl transferase AM340_RS24350 PF04321 RmlD substrate binding domain AM340_RS24355 PF16363 GDP-mannose 4,6 dehydratase AM340_RS24360 PF00483 Nucleotidyl transferase AM340_RS24370 PF13439 Glycosyltransferase Family 4 AM340_RS24370 PF00534 Glycosyl transferases group 1 AM340_RS24375 PF04230 Polysaccharide pyruvyl transferase AM340_RS24385 PF02397 Bacterial sugar transferase AM340_RS24390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM340_RS24390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM340_RS24390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM340_RS24390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM340_RS24395 PF00483 Nucleotidyl transferase AM340_RS24395 PF01050 Mannose-6-phosphate isomerase AM340_RS24400 PF13579 Glycosyl transferase 4-like domain AM340_RS24400 PF00534 Glycosyl transferases group 1 AM340_RS24405 PF00293 NUDIX domain AM340_RS24410 PF01370 NAD dependent epimerase/dehydratase family AM340_RS24415 PF16363 GDP-mannose 4,6 dehydratase AM340_RS24420 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS24425 PF00535 Glycosyl transferase family 2 AM340_RS24435 PF13439 Glycosyltransferase Family 4 AM340_RS24435 PF00534 Glycosyl transferases group 1 AM340_RS24440 PF00132 Bacterial transferase hexapeptide (six repeats) AM340_RS24445 PF00535 Glycosyl transferase family 2 AM340_RS24450 PF02706 Chain length determinant protein AM340_RS24450 PF13807 G-rich domain on putative tyrosine kinase AM340_RS24450 PF13614 AAA domain AM340_RS24455 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM340_RS24460 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM340_RS24460 PF02563 Polysaccharide biosynthesis/export protein AM340_RS24460 PF10531 SLBB domain AM340_RS24465 PF03471 Transporter associated domain AM340_RS24465 PF00571 CBS domain AM340_RS24465 PF03741 Integral membrane protein TerC family AM340_RS24480 PF05170 AsmA family AM340_RS24485 PF00692 dUTPase AM340_RS24490 PF00485 Phosphoribulokinase / Uridine kinase family AM340_RS24495 PF08448 PAS fold AM340_RS24495 PF13426 PAS domain AM340_RS24495 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS24495 PF08447 PAS fold AM340_RS24495 PF05231 MASE1 AM340_RS24495 PF00563 EAL domain AM340_RS24500 PF00730 HhH-GPD superfamily base excision DNA repair protein AM340_RS24500 PF06029 AlkA N-terminal domain AM340_RS24510 PF00012 Hsp70 protein AM340_RS24525 PF00092 von Willebrand factor type A domain AM340_RS24550 PF13533 Biotin-lipoyl like AM340_RS24555 PF00873 AcrB/AcrD/AcrF family AM340_RS24560 PF00873 AcrB/AcrD/AcrF family AM340_RS24565 PF07690 Major Facilitator Superfamily AM340_RS24570 PF00672 HAMP domain AM340_RS24570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS24570 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS24575 PF00486 Transcriptional regulatory protein, C terminal AM340_RS24575 PF00072 Response regulator receiver domain AM340_RS24580 PF07411 Domain of unknown function (DUF1508) AM340_RS24585 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AM340_RS24595 PF16325 Peptidase family U32 C-terminal domain AM340_RS24595 PF01136 Peptidase family U32 AM340_RS24610 PF00781 Diacylglycerol kinase catalytic domain AM340_RS24615 PF08220 DeoR-like helix-turn-helix domain AM340_RS24620 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS24620 PF00107 Zinc-binding dehydrogenase AM340_RS24625 PF03611 PTS system sugar-specific permease component AM340_RS24630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM340_RS24635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM340_RS24640 PF08013 Tagatose 6 phosphate kinase AM340_RS24645 PF01116 Fructose-bisphosphate aldolase class-II AM340_RS24650 PF01791 DeoC/LacD family aldolase AM340_RS24655 PF03825 Nucleoside H+ symporter AM340_RS24660 PF03747 ADP-ribosylglycohydrolase AM340_RS24665 PF00294 pfkB family carbohydrate kinase AM340_RS24670 PF07702 UTRA domain AM340_RS24670 PF00392 Bacterial regulatory proteins, gntR family AM340_RS24675 PF01183 Glycosyl hydrolases family 25 AM340_RS24680 PF08543 Phosphomethylpyrimidine kinase AM340_RS24685 PF02110 Hydroxyethylthiazole kinase family AM340_RS24690 PF02583 Metal-sensitive transcriptional repressor AM340_RS24695 PF03824 High-affinity nickel-transport protein AM340_RS24700 PF11776 Nickel/cobalt transporter regulator AM340_RS24705 PF00419 Fimbrial protein AM340_RS24710 PF00577 Outer membrane usher protein AM340_RS24710 PF13954 PapC N-terminal domain AM340_RS24710 PF13953 PapC C-terminal domain AM340_RS24715 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS24715 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS24720 PF00419 Fimbrial protein AM340_RS24730 PF10836 Protein of unknown function (DUF2574) AM340_RS24735 PF10609 NUBPL iron-transfer P-loop NTPase AM340_RS24740 PF01588 Putative tRNA binding domain AM340_RS24740 PF09334 tRNA synthetases class I (M) AM340_RS24745 PF13569 Domain of unknown function (DUF4132) AM340_RS24750 PF13569 Domain of unknown function (DUF4132) AM340_RS24755 PF13569 Domain of unknown function (DUF4132) AM340_RS24770 PF07728 AAA domain (dynein-related subfamily) AM340_RS24780 PF05762 VWA domain containing CoxE-like protein AM340_RS24785 PF04434 SWIM zinc finger AM340_RS24790 PF06998 Protein of unknown function (DUF1307) AM340_RS24795 PF07308 Protein of unknown function (DUF1456) AM340_RS24800 PF04397 LytTr DNA-binding domain AM340_RS24800 PF00072 Response regulator receiver domain AM340_RS24805 PF07694 5TMR of 5TMR-LYT AM340_RS24805 PF06580 Histidine kinase AM340_RS24815 PF06183 DinI-like family AM340_RS24830 PF03335 Phage tail fibre repeat AM340_RS24830 PF08400 Prophage tail fibre N-terminal AM340_RS24830 PF07484 Phage Tail Collar Domain AM340_RS24835 PF06316 Enterobacterial Ail/Lom protein AM340_RS24940 PF13132 Domain of unknown function (DUF3950) AM340_RS24960 PF03245 Bacteriophage Rz lysis protein AM340_RS24970 PF00959 Phage lysozyme AM340_RS24980 PF04971 Bacteriophage P21 holin S AM340_RS24995 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase AM340_RS25000 PF06519 TolA C-terminal AM340_RS25015 PF01555 DNA methylase AM340_RS25025 PF00267 Gram-negative porin AM340_RS25030 PF06530 Phage antitermination protein Q AM340_RS25035 PF06147 Protein of unknown function (DUF968) AM340_RS25045 PF03796 DnaB-like helicase C terminal domain AM340_RS25045 PF00772 DnaB-like helicase N terminal domain AM340_RS25050 PF01695 IstB-like ATP binding protein AM340_RS25075 PF09669 Phage regulatory protein Rha (Phage_pRha) AM340_RS25075 PF10549 ORF11CD3 domain AM340_RS25090 PF00717 Peptidase S24-like AM340_RS25090 PF13443 Cro/C1-type HTH DNA-binding domain AM340_RS25170 PF12167 Arm DNA-binding domain AM340_RS25170 PF00589 Phage integrase family AM340_RS25175 PF13411 MerR HTH family regulatory protein AM340_RS25185 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25190 PF00005 ABC transporter AM340_RS25195 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM340_RS25205 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM340_RS25205 PF00933 Glycosyl hydrolase family 3 N terminal domain AM340_RS25205 PF14310 Fibronectin type III-like domain AM340_RS25210 PF09330 D-lactate dehydrogenase, membrane binding AM340_RS25210 PF01565 FAD binding domain AM340_RS25215 PF00768 D-alanyl-D-alanine carboxypeptidase AM340_RS25220 PF04893 Yip1 domain AM340_RS25225 PF09335 SNARE associated Golgi protein AM340_RS25255 PF02371 Transposase IS116/IS110/IS902 family AM340_RS25255 PF01548 Transposase AM340_RS25260 PF03956 Lysine exporter LysO AM340_RS25265 PF03063 Prismane/CO dehydrogenase family AM340_RS25270 PF00175 Oxidoreductase NAD-binding domain AM340_RS25270 PF00970 Oxidoreductase FAD-binding domain AM340_RS25270 PF00111 2Fe-2S iron-sulfur cluster binding domain AM340_RS25275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM340_RS25275 PF00205 Thiamine pyrophosphate enzyme, central domain AM340_RS25275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM340_RS25280 PF01212 Beta-eliminating lyase AM340_RS25285 PF13460 NAD(P)H-binding AM340_RS25285 PF11066 Protein of unknown function (DUF2867) AM340_RS25290 PF01370 NAD dependent epimerase/dehydratase family AM340_RS25295 PF01510 N-acetylmuramoyl-L-alanine amidase AM340_RS25300 PF01906 Putative heavy-metal-binding AM340_RS25325 PF00005 ABC transporter AM340_RS25330 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS25335 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25340 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25345 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS25350 PF05958 tRNA (Uracil-5-)-methyltransferase AM340_RS25355 PF10767 Protein of unknown function (DUF2593) AM340_RS25360 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25365 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25370 PF00005 ABC transporter AM340_RS25370 PF08402 TOBE domain AM340_RS25375 PF13416 Bacterial extracellular solute-binding protein AM340_RS25380 PF10722 Putative bacterial sensory transduction regulator AM340_RS25385 PF08443 RimK-like ATP-grasp domain AM340_RS25385 PF18030 RimK PreATP-grasp domain AM340_RS25390 PF00881 Nitroreductase family AM340_RS25395 PF07214 Protein of unknown function (DUF1418) AM340_RS25400 PF00462 Glutaredoxin AM340_RS25405 PF11045 Putative inner membrane protein of Enterobacteriaceae AM340_RS25410 PF06826 Predicted Permease Membrane Region AM340_RS25410 PF02080 TrkA-C domain AM340_RS25415 PF00440 Bacterial regulatory proteins, tetR family AM340_RS25420 PF07690 Major Facilitator Superfamily AM340_RS25435 PF07690 Major Facilitator Superfamily AM340_RS25440 PF01569 PAP2 superfamily AM340_RS25445 PF08220 DeoR-like helix-turn-helix domain AM340_RS25445 PF00455 DeoR C terminal sensor domain AM340_RS25450 PF00768 D-alanyl-D-alanine carboxypeptidase AM340_RS25450 PF07943 Penicillin-binding protein 5, C-terminal domain AM340_RS25455 PF13417 Glutathione S-transferase, N-terminal domain AM340_RS25455 PF00043 Glutathione S-transferase, C-terminal domain AM340_RS25460 PF07995 Glucose / Sorbosone dehydrogenase AM340_RS25465 PF10799 Biofilm formation protein (YliH/bssR) AM340_RS25470 PF18693 TRAM domain AM340_RS25470 PF04055 Radical SAM superfamily AM340_RS25470 PF00919 Uncharacterized protein family UPF0004 AM340_RS25485 PF00990 Diguanylate cyclase, GGDEF domain AM340_RS25485 PF17156 Gammaproteobacterial periplasmic sensor domain AM340_RS25490 PF17153 Periplasmic sensor domain, extracellular AM340_RS25490 PF00563 EAL domain AM340_RS25495 PF12911 N-terminal TM domain of oligopeptide transport permease C AM340_RS25495 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25500 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS25510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM340_RS25510 PF00005 ABC transporter AM340_RS25515 PF01112 Asparaginase AM340_RS25520 PF00994 Probable molybdopterin binding domain AM340_RS25520 PF03454 MoeA C-terminal region (domain IV) AM340_RS25520 PF03453 MoeA N-terminal region (domain I and II) AM340_RS25525 PF00899 ThiF family AM340_RS25530 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM340_RS25535 PF04055 Radical SAM superfamily AM340_RS25540 PF02901 Pyruvate formate lyase-like AM340_RS25540 PF01228 Glycine radical AM340_RS25550 PF07350 Protein of unknown function (DUF1479) AM340_RS25555 PF00005 ABC transporter AM340_RS25555 PF12848 ABC transporter AM340_RS25560 PF17969 L,D-transpeptidase C-terminal domain AM340_RS25560 PF03734 L,D-transpeptidase catalytic domain AM340_RS25565 PF03600 Citrate transporter AM340_RS25570 PF02742 Iron dependent repressor, metal binding and dimerisation domain AM340_RS25570 PF01325 Iron dependent repressor, N-terminal DNA binding domain AM340_RS25580 PF00884 Sulfatase AM340_RS25585 PF13505 Outer membrane protein beta-barrel domain AM340_RS25590 PF00892 EamA-like transporter family AM340_RS25595 PF00210 Ferritin-like domain AM340_RS25605 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS25610 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25615 PF00005 ABC transporter AM340_RS25620 PF00924 Mechanosensitive ion channel AM340_RS25625 PF05971 RNA methyltransferase AM340_RS25630 PF07338 Protein of unknown function (DUF1471) AM340_RS25635 PF07715 TonB-dependent Receptor Plug Domain AM340_RS25635 PF00593 TonB dependent receptor AM340_RS25640 PF18331 PKHD-type hydroxylase C-terminal domain AM340_RS25640 PF13640 2OG-Fe(II) oxygenase superfamily AM340_RS25645 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM340_RS25650 PF07338 Protein of unknown function (DUF1471) AM340_RS25655 PF02615 Malate/L-lactate dehydrogenase AM340_RS25660 PF02885 Glycosyl transferase family, helical bundle domain AM340_RS25665 PF00270 DEAD/DEAH box helicase AM340_RS25665 PF06733 DEAD_2 AM340_RS25665 PF13307 Helicase C-terminal domain AM340_RS25680 PF00271 Helicase conserved C-terminal domain AM340_RS25680 PF00270 DEAD/DEAH box helicase AM340_RS25685 PF00440 Bacterial regulatory proteins, tetR family AM340_RS25685 PF09209 Tetracyclin repressor-like, C-terminal domain AM340_RS25690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS25695 PF00005 ABC transporter AM340_RS25710 PF11076 Putative inner membrane protein YbhQ AM340_RS25715 PF03372 Endonuclease/Exonuclease/phosphatase family AM340_RS25720 PF13091 PLD-like domain AM340_RS25725 PF03706 Lysylphosphatidylglycerol synthase TM region AM340_RS25730 PF01027 Inhibitor of apoptosis-promoting Bax1 AM340_RS25735 PF01027 Inhibitor of apoptosis-promoting Bax1 AM340_RS25740 PF02391 MoaE protein AM340_RS25745 PF02597 ThiS family AM340_RS25750 PF01967 MoaC family AM340_RS25755 PF00994 Probable molybdopterin binding domain AM340_RS25760 PF06463 Molybdenum Cofactor Synthesis C AM340_RS25760 PF04055 Radical SAM superfamily AM340_RS25765 PF01933 Uncharacterised protein family UPF0052 AM340_RS25770 PF00271 Helicase conserved C-terminal domain AM340_RS25770 PF04851 Type III restriction enzyme, res subunit AM340_RS25770 PF12344 Ultra-violet resistance protein B AM340_RS25770 PF17757 UvrB interaction domain AM340_RS25770 PF02151 UvrB/uvrC motif AM340_RS25780 PF08241 Methyltransferase domain AM340_RS25785 PF00155 Aminotransferase class I and II AM340_RS25790 PF04055 Radical SAM superfamily AM340_RS25790 PF06968 Biotin and Thiamin Synthesis associated domain AM340_RS25795 PF00202 Aminotransferase class-III AM340_RS25800 PF01161 Phosphatidylethanolamine-binding protein AM340_RS25805 PF01095 Pectinesterase AM340_RS25820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS25820 PF03466 LysR substrate binding domain AM340_RS25825 PF10282 Lactonase, 7-bladed beta-propeller AM340_RS25835 PF00005 ABC transporter AM340_RS25835 PF03459 TOBE domain AM340_RS25840 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS25850 PF10766 Multidrug efflux pump-associated protein AcrZ AM340_RS25855 PF03459 TOBE domain AM340_RS25855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS25860 PF00005 ABC transporter AM340_RS25865 PF16363 GDP-mannose 4,6 dehydratase AM340_RS25870 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM340_RS25870 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM340_RS25875 PF00288 GHMP kinases N terminal domain AM340_RS25875 PF08544 GHMP kinases C terminal AM340_RS25875 PF10509 Galactokinase galactose-binding signature AM340_RS25880 PF01263 Aldose 1-epimerase AM340_RS25885 PF00300 Histidine phosphatase superfamily (branch 1) AM340_RS25890 PF00793 DAHP synthetase I family AM340_RS25900 PF13985 YbgS-like protein AM340_RS25905 PF01545 Cation efflux family AM340_RS25910 PF04973 Nicotinamide mononucleotide transporter AM340_RS25915 PF02445 Quinolinate synthetase A protein AM340_RS25955 PF16331 TolA binding protein trimerisation AM340_RS25955 PF13174 Tetratricopeptide repeat AM340_RS25960 PF00691 OmpA family AM340_RS25965 PF04052 TolB amino-terminal domain AM340_RS25965 PF07676 WD40-like Beta Propeller Repeat AM340_RS25970 PF06519 TolA C-terminal AM340_RS25975 PF02472 Biopolymer transport protein ExbD/TolR AM340_RS25980 PF01618 MotA/TolQ/ExbB proton channel family AM340_RS25985 PF03061 Thioesterase superfamily AM340_RS25990 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AM340_RS25995 PF08173 Membrane bound YbgT-like protein AM340_RS26000 PF02322 Cytochrome bd terminal oxidase subunit II AM340_RS26005 PF01654 Cytochrome bd terminal oxidase subunit I AM340_RS26025 PF02310 B12 binding domain AM340_RS26030 PF13941 MutL protein AM340_RS26035 PF06368 Methylaspartate mutase E chain (MutE) AM340_RS26040 PF05034 Methylaspartate ammonia-lyase N-terminus AM340_RS26040 PF07476 Methylaspartate ammonia-lyase C-terminus AM340_RS26055 PF00375 Sodium:dicarboxylate symporter family AM340_RS26060 PF05683 Fumarase C-terminus AM340_RS26060 PF05681 Fumarate hydratase (Fumerase) AM340_RS26065 PF12557 Cob(I)alamin adenosyltransferase N terminal AM340_RS26065 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM340_RS26070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS26070 PF03466 LysR substrate binding domain AM340_RS26075 PF00221 Aromatic amino acid lyase AM340_RS26080 PF00491 Arginase family AM340_RS26085 PF01979 Amidohydrolase family AM340_RS26090 PF05962 HutD AM340_RS26095 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM340_RS26100 PF17392 Urocanase C-terminal domain AM340_RS26100 PF01175 Urocanase Rossmann-like domain AM340_RS26100 PF17391 Urocanase N-terminal domain AM340_RS26110 PF00549 CoA-ligase AM340_RS26110 PF02629 CoA binding domain AM340_RS26115 PF08442 ATP-grasp domain AM340_RS26115 PF00549 CoA-ligase AM340_RS26120 PF00364 Biotin-requiring enzyme AM340_RS26120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM340_RS26120 PF02817 e3 binding domain AM340_RS26125 PF16078 2-oxoglutarate dehydrogenase N-terminus AM340_RS26125 PF16870 2-oxoglutarate dehydrogenase C-terminal AM340_RS26125 PF02779 Transketolase, pyrimidine binding domain AM340_RS26125 PF00676 Dehydrogenase E1 component AM340_RS26130 PF13085 2Fe-2S iron-sulfur cluster binding domain AM340_RS26135 PF02910 Fumarate reductase flavoprotein C-term AM340_RS26135 PF00890 FAD binding domain AM340_RS26140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM340_RS26145 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM340_RS26155 PF00285 Citrate synthase, C-terminal domain AM340_RS26160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM340_RS26170 PF03480 Bacterial extracellular solute-binding protein, family 7 AM340_RS26175 PF08666 SAF domain AM340_RS26175 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM340_RS26190 PF08240 Alcohol dehydrogenase GroES-like domain AM340_RS26190 PF00107 Zinc-binding dehydrogenase AM340_RS26195 PF03737 Aldolase/RraA AM340_RS26195 PF00180 Isocitrate/isopropylmalate dehydrogenase AM340_RS26200 PF00392 Bacterial regulatory proteins, gntR family AM340_RS26200 PF07729 FCD domain AM340_RS26205 PF05145 Transition state regulatory protein AbrB AM340_RS26210 PF06827 Zinc finger found in FPG and IleRS AM340_RS26210 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM340_RS26210 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM340_RS26215 PF03746 LamB/YcsF family AM340_RS26220 PF02626 Carboxyltransferase domain, subdomain A and B AM340_RS26225 PF02682 Carboxyltransferase domain, subdomain C and D AM340_RS26230 PF01784 NIF3 (NGG1p interacting factor 3) AM340_RS26235 PF00854 POT family AM340_RS26240 PF03441 FAD binding domain of DNA photolyase AM340_RS26240 PF00875 DNA photolyase AM340_RS26245 PF08349 Protein of unknown function (DUF1722) AM340_RS26250 PF10725 Protein of unknown function (DUF2517) AM340_RS26255 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) AM340_RS26260 PF03814 Potassium-transporting ATPase A subunit AM340_RS26270 PF02669 K+-transporting ATPase, c chain AM340_RS26275 PF02702 Osmosensitive K+ channel His kinase sensor domain AM340_RS26275 PF13493 Domain of unknown function (DUF4118) AM340_RS26275 PF13492 GAF domain AM340_RS26275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS26275 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS26280 PF00486 Transcriptional regulatory protein, C terminal AM340_RS26280 PF00072 Response regulator receiver domain AM340_RS26290 PF01276 Orn/Lys/Arg decarboxylase, major domain AM340_RS26290 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM340_RS26290 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM340_RS26295 PF13520 Amino acid permease AM340_RS26305 PF10946 Protein of unknown function DUF2625 AM340_RS26315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM340_RS26315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM340_RS26315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM340_RS26315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM340_RS26320 PF03925 SeqA protein C-terminal domain AM340_RS26320 PF17206 SeqA protein N-terminal domain AM340_RS26325 PF12697 Alpha/beta hydrolase family AM340_RS26330 PF01402 Ribbon-helix-helix protein, copG family AM340_RS26335 PF00258 Flavodoxin AM340_RS26345 PF01475 Ferric uptake regulator family AM340_RS26350 PF13982 YbfN-like lipoprotein AM340_RS26355 PF03573 outer membrane porin, OprD family AM340_RS26360 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM340_RS26360 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM340_RS26365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM340_RS26365 PF00367 phosphotransferase system, EIIB AM340_RS26365 PF02378 Phosphotransferase system, EIIC AM340_RS26370 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM340_RS26375 PF01979 Amidohydrolase family AM340_RS26380 PF00480 ROK family AM340_RS26380 PF01047 MarR family AM340_RS26385 PF13344 Haloacid dehalogenase-like hydrolase AM340_RS26390 PF00733 Asparagine synthase AM340_RS26390 PF13537 Glutamine amidotransferase domain AM340_RS26440 PF01494 FAD binding domain AM340_RS26445 PF00919 Uncharacterized protein family UPF0004 AM340_RS26445 PF04055 Radical SAM superfamily AM340_RS26445 PF01938 TRAM domain AM340_RS26450 PF02562 PhoH-like protein AM340_RS26455 PF02130 Uncharacterized protein family UPF0054 AM340_RS26460 PF00571 CBS domain AM340_RS26460 PF03471 Transporter associated domain AM340_RS26465 PF00795 Carbon-nitrogen hydrolase AM340_RS26470 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM340_RS26475 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS26480 PF00528 Binding-protein-dependent transport system inner membrane component AM340_RS26485 PF00005 ABC transporter AM340_RS26490 PF01156 Inosine-uridine preferring nucleoside hydrolase AM340_RS26495 PF07295 Zinc-ribbon containing domain AM340_RS26500 PF08264 Anticodon-binding domain of tRNA AM340_RS26500 PF00133 tRNA synthetases class I (I, L, M and V) AM340_RS26500 PF13603 Leucyl-tRNA synthetase, Domain 2 AM340_RS26505 PF04390 Lipopolysaccharide-assembly AM340_RS26510 PF06144 DNA polymerase III, delta subunit AM340_RS26510 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AM340_RS26515 PF01467 Cytidylyltransferase-like AM340_RS26520 PF00300 Histidine phosphatase superfamily (branch 1) AM340_RS26530 PF02590 Predicted SPOUT methyltransferase AM340_RS26535 PF00905 Penicillin binding protein transpeptidase domain AM340_RS26535 PF03717 Penicillin-binding Protein dimerisation domain AM340_RS26540 PF01098 Cell cycle protein AM340_RS26545 PF05036 Sporulation related domain AM340_RS26545 PF03330 Lytic transglycolase AM340_RS26550 PF07943 Penicillin-binding protein 5, C-terminal domain AM340_RS26550 PF00768 D-alanyl-D-alanine carboxypeptidase AM340_RS26555 PF04359 Protein of unknown function (DUF493) AM340_RS26560 PF03099 Biotin/lipoate A/B protein ligase family AM340_RS26570 PF03466 LysR substrate binding domain AM340_RS26570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS26575 PF04055 Radical SAM superfamily AM340_RS26575 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM340_RS26580 PF02416 mttA/Hcf106 family AM340_RS26585 PF00795 Carbon-nitrogen hydrolase AM340_RS26590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM340_RS26595 PF00313 'Cold-shock' DNA-binding domain AM340_RS26600 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AM340_RS26610 PF03606 C4-dicarboxylate anaerobic carrier AM340_RS26615 PF00072 Response regulator receiver domain AM340_RS26615 PF12431 Transcriptional regulator AM340_RS26620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS26620 PF17203 Single cache domain 3 AM340_RS26620 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM340_RS26620 PF00989 PAS fold AM340_RS26625 PF08218 Citrate lyase ligase C-terminal domain AM340_RS26630 PF06857 Malonate decarboxylase delta subunit (MdcD) AM340_RS26635 PF03328 HpcH/HpaI aldolase/citrate lyase family AM340_RS26640 PF04223 Citrate lyase, alpha subunit (CitF) AM340_RS26645 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AM340_RS26650 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM340_RS26655 PF00939 Sodium:sulfate symporter transmembrane region AM340_RS26660 PF00445 Ribonuclease T2 family AM340_RS26670 PF01272 Transcription elongation factor, GreA/GreB, C-term AM340_RS26670 PF14760 Rnk N-terminus AM340_RS26675 PF00582 Universal stress protein family AM340_RS26680 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM340_RS26680 PF13192 Thioredoxin domain AM340_RS26690 PF00578 AhpC/TSA family AM340_RS26690 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM340_RS26695 PF13098 Thioredoxin-like domain AM340_RS26700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS26700 PF03466 LysR substrate binding domain AM340_RS26705 PF01507 Phosphoadenosine phosphosulfate reductase family AM340_RS26705 PF11922 Domain of unknown function (DUF3440) AM340_RS26710 PF02195 ParB-like nuclease domain AM340_RS26715 PF00155 Aminotransferase class I and II AM340_RS26720 PF00465 Iron-containing alcohol dehydrogenase AM340_RS26725 PF04328 Selenoprotein, putative AM340_RS26730 PF13722 5TM C-terminal transporter carbon starvation CstA AM340_RS26730 PF02554 Carbon starvation protein CstA AM340_RS26735 PF03061 Thioesterase superfamily AM340_RS26745 PF00857 Isochorismatase family AM340_RS26745 PF00550 Phosphopantetheine attachment site AM340_RS26750 PF00501 AMP-binding enzyme AM340_RS26750 PF13193 AMP-binding enzyme C-terminal domain AM340_RS26755 PF00425 chorismate binding enzyme AM340_RS26760 PF01497 Periplasmic binding protein AM340_RS26765 PF05977 Transmembrane secretion effector AM340_RS26770 PF01032 FecCD transport family AM340_RS26775 PF01032 FecCD transport family AM340_RS26780 PF00005 ABC transporter AM340_RS26785 PF02706 Chain length determinant protein AM340_RS26790 PF00550 Phosphopantetheine attachment site AM340_RS26790 PF00668 Condensation domain AM340_RS26790 PF13193 AMP-binding enzyme C-terminal domain AM340_RS26790 PF00501 AMP-binding enzyme AM340_RS26790 PF00975 Thioesterase domain AM340_RS26795 PF03621 MbtH-like protein AM340_RS26800 PF11806 Domain of unknown function (DUF3327) AM340_RS26800 PF00756 Putative esterase AM340_RS26805 PF00593 TonB dependent receptor AM340_RS26805 PF07715 TonB-dependent Receptor Plug Domain AM340_RS26810 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AM340_RS26810 PF01648 4'-phosphopantetheinyl transferase superfamily AM340_RS26815 PF01848 Hok/gef family AM340_RS26830 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM340_RS26835 PF06643 Protein of unknown function (DUF1158) AM340_RS26840 PF04237 YjbR AM340_RS26845 PF00881 Nitroreductase family AM340_RS26850 PF00924 Mechanosensitive ion channel AM340_RS26855 PF00324 Amino acid permease AM340_RS26860 PF00873 AcrB/AcrD/AcrF family AM340_RS26865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS26865 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS26870 PF11604 Copper binding periplasmic protein CusF AM340_RS26875 PF02321 Outer membrane efflux protein AM340_RS26880 PF00072 Response regulator receiver domain AM340_RS26880 PF00486 Transcriptional regulatory protein, C terminal AM340_RS26885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS26885 PF00672 HAMP domain AM340_RS26885 PF00512 His Kinase A (phospho-acceptor) domain AM340_RS26895 PF13283 Bacteriophage N adsorption protein A C-term AM340_RS26900 PF14488 Domain of unknown function (DUF4434) AM340_RS26910 PF12833 Helix-turn-helix domain AM340_RS26925 PF01278 Omptin family AM340_RS26930 PF00561 alpha/beta hydrolase fold AM340_RS26940 PF08242 Methyltransferase domain AM340_RS26970 PF07484 Phage Tail Collar Domain AM340_RS26970 PF03335 Phage tail fibre repeat AM340_RS26970 PF08400 Prophage tail fibre N-terminal AM340_RS26975 PF06316 Enterobacterial Ail/Lom protein AM340_RS27005 PF06791 Prophage tail length tape measure protein AM340_RS27070 PF03864 Phage major capsid protein E AM340_RS27120 PF00589 Phage integrase family AM340_RS27120 PF13356 Arm DNA-binding domain AM340_RS27120 PF14659 Phage integrase, N-terminal SAM-like domain AM340_RS27135 PF01972 Serine dehydrogenase proteinase AM340_RS27135 PF01957 NfeD-like C-terminal, partner-binding AM340_RS27145 PF02831 gpW AM340_RS27150 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM340_RS27155 PF07471 Phage DNA packaging protein Nu1 AM340_RS27160 PF06291 Bor protein AM340_RS27165 PF03245 Bacteriophage Rz lysis protein AM340_RS27170 PF00959 Phage lysozyme AM340_RS27175 PF04971 Bacteriophage P21 holin S AM340_RS27180 PF12833 Helix-turn-helix domain AM340_RS27185 PF08349 Protein of unknown function (DUF1722) AM340_RS27190 PF08212 Lipocalin-like domain AM340_RS27195 PF06530 Phage antitermination protein Q AM340_RS27205 PF05866 Endodeoxyribonuclease RusA AM340_RS27210 PF07102 Protein of unknown function (DUF1364) AM340_RS27230 PF12833 Helix-turn-helix domain AM340_RS27235 PF01161 Phosphatidylethanolamine-binding protein AM340_RS27250 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM340_RS27275 PF00072 Response regulator receiver domain AM340_RS27275 PF00196 Bacterial regulatory proteins, luxR family AM340_RS27280 PF00419 Fimbrial protein AM340_RS27285 PF00419 Fimbrial protein AM340_RS27290 PF00577 Outer membrane usher protein AM340_RS27290 PF13954 PapC N-terminal domain AM340_RS27290 PF13953 PapC C-terminal domain AM340_RS27295 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM340_RS27295 PF02753 Pili assembly chaperone PapD, C-terminal domain AM340_RS27300 PF00419 Fimbrial protein AM340_RS27305 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM340_RS27305 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM340_RS27315 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM340_RS27320 PF01406 tRNA synthetases class I (C) catalytic domain AM340_RS27320 PF09190 DALR domain AM340_RS27325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM340_RS27330 PF12850 Calcineurin-like phosphoesterase superfamily domain AM340_RS27340 PF00731 AIR carboxylase AM340_RS27345 PF02222 ATP-grasp domain AM340_RS27345 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM340_RS27350 PF00696 Amino acid kinase family AM340_RS27355 PF11392 Protein of unknown function (DUF2877) AM340_RS27360 PF06545 Protein of unknown function (DUF1116) AM340_RS27365 PF02629 CoA binding domain AM340_RS27365 PF00549 CoA-ligase AM340_RS27370 PF02615 Malate/L-lactate dehydrogenase AM340_RS27375 PF01546 Peptidase family M20/M25/M40 AM340_RS27380 PF07883 Cupin domain AM340_RS27380 PF05899 Protein of unknown function (DUF861) AM340_RS27385 PF02595 Glycerate kinase family AM340_RS27390 PF00860 Permease family AM340_RS27395 PF01979 Amidohydrolase family AM340_RS27405 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM340_RS27405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM340_RS27410 PF01261 Xylose isomerase-like TIM barrel AM340_RS27415 PF00205 Thiamine pyrophosphate enzyme, central domain AM340_RS27415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM340_RS27415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM340_RS27420 PF09339 IclR helix-turn-helix domain AM340_RS27420 PF01614 Bacterial transcriptional regulator AM340_RS27425 PF04115 Ureidoglycolate lyase AM340_RS27430 PF03466 LysR substrate binding domain AM340_RS27430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM340_RS27445 PF00005 ABC transporter AM340_RS27455 PF00106 short chain dehydrogenase AM340_RS27460 PF00085 Thioredoxin AM340_RS27465 PF03649 Uncharacterised protein family (UPF0014) AM340_RS27470 PF00005 ABC transporter AM340_RS27475 PF01145 SPFH domain / Band 7 family AM340_RS27475 PF16200 C-terminal region of band_7 AM340_RS27480 PF01957 NfeD-like C-terminal, partner-binding AM340_RS27505 PF01609 Transposase DDE domain AM340_RS27505 PF13006 Insertion element 4 transposase N-terminal AM340_RS27510 PF13411 MerR HTH family regulatory protein AM340_RS27515 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS27520 PF03412 Peptidase C39 family AM340_RS27520 PF00664 ABC transporter transmembrane region AM340_RS27520 PF00005 ABC transporter AM340_RS27535 PF13520 Amino acid permease AM340_RS27540 PF04960 Glutaminase AM340_RS27545 PF00403 Heavy-metal-associated domain AM340_RS27550 PF01963 TraB family AM340_RS27560 PF04073 Aminoacyl-tRNA editing domain AM340_RS27565 PF00149 Calcineurin-like phosphoesterase AM340_RS27565 PF02872 5'-nucleotidase, C-terminal domain AM340_RS27570 PF07690 Major Facilitator Superfamily AM340_RS27575 PF02254 TrkA-N domain AM340_RS27575 PF00999 Sodium/hydrogen exchanger family AM340_RS27580 PF00294 pfkB family carbohydrate kinase AM340_RS27585 PF07859 alpha/beta hydrolase fold AM340_RS27590 PF00762 Ferrochelatase AM340_RS27595 PF05191 Adenylate kinase, active site lid AM340_RS27605 PF00183 Hsp90 protein AM340_RS27605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM340_RS27610 PF02132 RecR protein AM340_RS27610 PF13662 Toprim domain AM340_RS27615 PF02575 YbaB/EbfC DNA-binding family AM340_RS27620 PF12169 DNA polymerase III subunits gamma and tau domain III AM340_RS27620 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM340_RS27620 PF12170 DNA polymerase III tau subunit V interacting with alpha AM340_RS27625 PF00156 Phosphoribosyl transferase domain AM340_RS27630 PF04304 Protein of unknown function (DUF454) AM340_RS27635 PF07445 Primosomal replication protein priC AM340_RS27640 PF10689 Protein of unknown function (DUF2496) AM340_RS27645 PF00924 Mechanosensitive ion channel AM340_RS27645 PF12795 Mechanosensitive ion channel porin domain AM340_RS27645 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM340_RS27655 PF08361 MAATS-type transcriptional repressor, C-terminal region AM340_RS27655 PF00440 Bacterial regulatory proteins, tetR family AM340_RS27660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM340_RS27660 PF00529 HlyD membrane-fusion protein of T1SS AM340_RS27665 PF00873 AcrB/AcrD/AcrF family AM340_RS27670 PF10757 Biofilm formation regulator YbaJ AM340_RS27675 PF05321 Haemolysin expression modulating protein AM340_RS27680 PF14602 Hexapeptide repeat of succinyl-transferase AM340_RS27680 PF12464 Maltose acetyltransferase AM340_RS27685 PF10777 Inner membrane protein YlaC AM340_RS27690 PF00563 EAL domain AM340_RS27690 PF12792 CSS motif domain associated with EAL AM340_RS27695 PF07237 Protein of unknown function (DUF1428) AM340_RS27705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM340_RS27710 PF09619 Type III secretion system lipoprotein chaperone (YscW) AM340_RS27720 PF00909 Ammonium Transporter Family AM340_RS27725 PF00543 Nitrogen regulatory protein P-II AM340_RS27730 PF00664 ABC transporter transmembrane region AM340_RS27730 PF00005 ABC transporter AM340_RS27735 PF00664 ABC transporter transmembrane region AM340_RS27735 PF00005 ABC transporter AM340_RS27740 PF13404 AsnC-type helix-turn-helix domain AM340_RS27740 PF01037 Lrp/AsnC ligand binding domain AM340_RS27750 PF12793 Sugar transport-related sRNA regulator N-term AM340_RS27750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM340_RS27755 PF06508 Queuosine biosynthesis protein QueC AM340_RS27770 PF13145 PPIC-type PPIASE domain AM340_RS27775 PF00216 Bacterial DNA-binding protein AM340_RS27780 PF05362 Lon protease (S16) C-terminal proteolytic domain AM340_RS27780 PF00004 ATPase family associated with various cellular activities (AAA) AM340_RS27780 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM340_RS27785 PF06689 ClpX C4-type zinc finger AM340_RS27785 PF10431 C-terminal, D2-small domain, of ClpB protein AM340_RS27785 PF07724 AAA domain (Cdc48 subfamily) AM340_RS27790 PF00574 Clp protease AM340_RS27795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM340_RS27795 PF05697 Bacterial trigger factor protein (TF) AM340_RS27795 PF05698 Bacterial trigger factor protein (TF) C-terminus AM340_RS27805 PF01722 BolA-like protein AM340_RS27810 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM340_RS27810 PF03923 Uncharacterized lipoprotein AM340_RS27815 PF07690 Major Facilitator Superfamily AM340_RS27820 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM340_RS27820 PF06481 COX Aromatic Rich Motif AM340_RS27825 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM340_RS27830 PF00510 Cytochrome c oxidase subunit III AM340_RS27835 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM340_RS27840 PF01040 UbiA prenyltransferase family AM340_RS27860 PF07690 Major Facilitator Superfamily AM340_RS27865 PF04461 Protein of unknown function (DUF520) AM340_RS27870 PF02558 Ketopantoate reductase PanE/ApbA AM340_RS27870 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM340_RS27875 PF01965 DJ-1/PfpI family AM340_RS27880 PF02568 Thiamine biosynthesis protein (ThiI) AM340_RS27880 PF02926 THUMP domain AM340_RS27885 PF02609 Exonuclease VII small subunit AM340_RS27890 PF00348 Polyprenyl synthetase AM340_RS27895 PF02780 Transketolase, C-terminal domain AM340_RS27895 PF02779 Transketolase, pyrimidine binding domain AM340_RS27895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM340_RS27900 PF00248 Aldo/keto reductase family AM340_RS27905 PF04608 Phosphatidylglycerophosphatase A AM340_RS27910 PF18272 single-stranded DNA binding TraI N-terminal subdomain AM340_RS27910 PF08751 TrwC relaxase AM340_RS27910 PF18340 DNA relaxase TraI 2B/2B-like domain AM340_RS27910 PF07057 DNA helicase TraI AM340_RS27915 PF05857 TraX protein AM340_RS27920 PF00561 alpha/beta hydrolase fold AM340_RS27925 PF12602 Fertility inhibition protein N terminal AM340_RS27925 PF04352 ProQ/FINO family AM340_RS27935 PF00565 Staphylococcal nuclease homologue AM340_RS27940 PF05321 Haemolysin expression modulating protein AM340_RS27950 PF10723 Replication regulatory protein RepB AM340_RS27960 PF08048 Tap RepA1 leader peptide AM340_RS27965 PF02387 IncFII RepA protein family AM340_RS27995 PF02264 LamB porin AM340_RS28010 PF07690 Major Facilitator Superfamily AM340_RS28015 PF00005 ABC transporter AM340_RS28020 PF01032 FecCD transport family AM340_RS28045 PF10784 Plasmid stability protein AM340_RS28050 PF06406 StbA protein AM340_RS28060 PF01555 DNA methylase AM340_RS28070 PF07128 Protein of unknown function (DUF1380) AM340_RS28080 PF07339 Protein of unknown function (DUF1472) AM340_RS28085 PF07339 Protein of unknown function (DUF1472) AM340_RS28090 PF03230 Antirestriction protein AM340_RS28095 PF07128 Protein of unknown function (DUF1380) AM340_RS28150 PF00436 Single-strand binding protein family AM340_RS28155 PF06006 Bacterial protein of unknown function (DUF905) AM340_RS28160 PF02195 ParB-like nuclease domain AM340_RS28165 PF06290 Plasmid SOS inhibition protein (PsiB) AM340_RS28170 PF06952 PsiA protein AM340_RS28180 PF01848 Hok/gef family AM340_RS28240 PF01464 Transglycosylase SLT domain AM340_RS28250 PF05261 TraM protein, DNA-binding AM340_RS28260 PF05509 TraY domain AM340_RS28265 PF05513 TraA AM340_RS28270 PF07178 TraL protein AM340_RS28275 PF05309 TraE protein AM340_RS28280 PF06586 TraK protein AM340_RS28285 PF03743 Bacterial conjugation TrbI-like protein AM340_RS28290 PF07296 TraP protein AM340_RS28295 PF10894 Protein of unknown function (DUF2689) AM340_RS28300 PF09676 Type IV conjugative transfer system lipoprotein (TraV) AM340_RS28305 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM340_RS28330 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer AM340_RS28335 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) AM340_RS28340 PF12477 Sex factor F TraW protein N terminal AM340_RS28345 PF06834 TraU protein AM340_RS28355 PF09673 Type-F conjugative transfer system pilin assembly protein AM340_RS28360 PF06986 Type-1V conjugative transfer system mating pair stabilisation AM340_RS28365 PF11100 Conjugal transfer protein TrbE AM340_RS28370 PF13728 F plasmid transfer operon protein AM340_RS28380 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) AM340_RS28385 PF13728 F plasmid transfer operon protein AM340_RS28400 PF06122 Conjugative relaxosome accessory transposon protein AM340_RS28405 PF07916 TraG-like protein, N-terminal region AM340_RS28415 PF05818 Enterobacterial TraT complement resistance protein AM340_RS28425 PF10412 Type IV secretion-system coupling protein DNA-binding domain AM340_RS28425 PF12615 F sex factor protein N terminal