locus-tag class description AM341_RS00005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM341_RS00010 PF10636 Hemin uptake protein hemP AM341_RS00015 PF00793 DAHP synthetase I family AM341_RS00020 PF03618 Kinase/pyrophosphorylase AM341_RS00030 PF00391 PEP-utilising enzyme, mobile domain AM341_RS00030 PF02896 PEP-utilising enzyme, TIM barrel domain AM341_RS00030 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM341_RS00035 PF13193 AMP-binding enzyme C-terminal domain AM341_RS00035 PF00501 AMP-binding enzyme AM341_RS00045 PF01494 FAD binding domain AM341_RS00050 PF00766 Electron transfer flavoprotein FAD-binding domain AM341_RS00050 PF01012 Electron transfer flavoprotein domain AM341_RS00055 PF01012 Electron transfer flavoprotein domain AM341_RS00065 PF02311 AraC-like ligand binding domain AM341_RS00065 PF12833 Helix-turn-helix domain AM341_RS00070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM341_RS00070 PF02770 Acyl-CoA dehydrogenase, middle domain AM341_RS00070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM341_RS00075 PF01144 Coenzyme A transferase AM341_RS00080 PF01487 Type I 3-dehydroquinase AM341_RS00085 PF08501 Shikimate dehydrogenase substrate binding domain AM341_RS00085 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM341_RS00090 PF07690 Major Facilitator Superfamily AM341_RS00095 PF07690 Major Facilitator Superfamily AM341_RS00100 PF08965 Domain of unknown function (DUF1870) AM341_RS00110 PF01594 AI-2E family transporter AM341_RS00115 PF13183 4Fe-4S dicluster domain AM341_RS00115 PF01565 FAD binding domain AM341_RS00115 PF02913 FAD linked oxidases, C-terminal domain AM341_RS00120 PF03061 Thioesterase superfamily AM341_RS00125 PF15930 Domain of unknown function AM341_RS00130 PF01521 Iron-sulphur cluster biosynthesis AM341_RS00135 PF01458 Uncharacterized protein family (UPF0051) AM341_RS00140 PF00005 ABC transporter AM341_RS00145 PF01458 Uncharacterized protein family (UPF0051) AM341_RS00150 PF00266 Aminotransferase class-V AM341_RS00155 PF02657 Fe-S metabolism associated domain AM341_RS00160 PF17969 L,D-transpeptidase C-terminal domain AM341_RS00160 PF01476 LysM domain AM341_RS00160 PF03734 L,D-transpeptidase catalytic domain AM341_RS00165 PF04728 Lipoprotein leucine-zipper AM341_RS00170 PF02887 Pyruvate kinase, alpha/beta domain AM341_RS00170 PF00224 Pyruvate kinase, barrel domain AM341_RS00175 PF10965 Protein of unknown function (DUF2767) AM341_RS00180 PF13247 4Fe-4S dicluster domain AM341_RS00180 PF12800 4Fe-4S binding domain AM341_RS00185 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AM341_RS00185 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AM341_RS00195 PF13247 4Fe-4S dicluster domain AM341_RS00200 PF01292 Prokaryotic cytochrome b561 AM341_RS00210 PF13454 FAD-NAD(P)-binding AM341_RS00215 PF08803 Putative mono-oxygenase ydhR AM341_RS00230 PF16168 Adhesin of bacterial autotransporter system, probable stalk AM341_RS00230 PF03212 Pertactin AM341_RS00235 PF01554 MatE AM341_RS00240 PF00677 Lumazine binding domain AM341_RS00250 PF07690 Major Facilitator Superfamily AM341_RS00255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS00255 PF03466 LysR substrate binding domain AM341_RS00260 PF00356 Bacterial regulatory proteins, lacI family AM341_RS00275 PF07690 Major Facilitator Superfamily AM341_RS00280 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM341_RS00280 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM341_RS00285 PF00877 NlpC/P60 family AM341_RS00290 PF00462 Glutaredoxin AM341_RS00295 PF00270 DEAD/DEAH box helicase AM341_RS00295 PF08494 DEAD/H associated AM341_RS00295 PF00271 Helicase conserved C-terminal domain AM341_RS00300 PF00929 Exonuclease AM341_RS00305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM341_RS00310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM341_RS00315 PF00440 Bacterial regulatory proteins, tetR family AM341_RS00315 PF16925 Tetracyclin repressor-like, C-terminal domain AM341_RS00320 PF06945 Protein of unknown function (DUF1289) AM341_RS00325 PF00248 Aldo/keto reductase family AM341_RS00330 PF00080 Copper/zinc superoxide dismutase (SODC) AM341_RS00335 PF04632 Fusaric acid resistance protein family AM341_RS00340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS00340 PF00529 HlyD membrane-fusion protein of T1SS AM341_RS00345 PF07869 Protein of unknown function (DUF1656) AM341_RS00350 PF01047 MarR family AM341_RS00355 PF05433 Glycine zipper 2TM domain AM341_RS00360 PF03702 Anhydro-N-acetylmuramic acid kinase AM341_RS00365 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AM341_RS00370 PF01243 Pyridoxamine 5'-phosphate oxidase AM341_RS00370 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM341_RS00375 PF01479 S4 domain AM341_RS00375 PF00579 tRNA synthetases class I (W and Y) AM341_RS00380 PF08543 Phosphomethylpyrimidine kinase AM341_RS00385 PF00043 Glutathione S-transferase, C-terminal domain AM341_RS00385 PF02798 Glutathione S-transferase, N-terminal domain AM341_RS00390 PF00854 POT family AM341_RS00400 PF00730 HhH-GPD superfamily base excision DNA repair protein AM341_RS00400 PF00633 Helix-hairpin-helix motif AM341_RS00400 PF10576 Iron-sulfur binding domain of endonuclease III AM341_RS00405 PF02508 Rnf-Nqr subunit, membrane protein AM341_RS00410 PF04205 FMN-binding domain AM341_RS00415 PF03116 NQR2, RnfD, RnfE family AM341_RS00420 PF12838 4Fe-4S dicluster domain AM341_RS00420 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM341_RS00420 PF10531 SLBB domain AM341_RS00420 PF13375 RnfC Barrel sandwich hybrid domain AM341_RS00425 PF04060 Putative Fe-S cluster AM341_RS00430 PF02508 Rnf-Nqr subunit, membrane protein AM341_RS00435 PF10754 Protein of unknown function (DUF2569) AM341_RS00440 PF05321 Haemolysin expression modulating protein AM341_RS00455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM341_RS00455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM341_RS00460 PF00962 Adenosine/AMP deaminase AM341_RS00465 PF00155 Aminotransferase class I and II AM341_RS00470 PF02378 Phosphotransferase system, EIIC AM341_RS00470 PF00367 phosphotransferase system, EIIB AM341_RS00475 PF00356 Bacterial regulatory proteins, lacI family AM341_RS00475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM341_RS00485 PF00440 Bacterial regulatory proteins, tetR family AM341_RS00490 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM341_RS00490 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM341_RS00490 PF00703 Glycosyl hydrolases family 2 AM341_RS00500 PF03573 outer membrane porin, OprD family AM341_RS00505 PF06097 Bacterial protein of unknown function (DUF945) AM341_RS00510 PF01238 Phosphomannose isomerase type I AM341_RS00515 PF05683 Fumarase C-terminus AM341_RS00515 PF05681 Fumarate hydratase (Fumerase) AM341_RS00520 PF10415 Fumarase C C-terminus AM341_RS00520 PF00206 Lyase AM341_RS00525 PF05472 DNA replication terminus site-binding protein (Ter protein) AM341_RS00530 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS00530 PF00672 HAMP domain AM341_RS00535 PF00486 Transcriptional regulatory protein, C terminal AM341_RS00535 PF00072 Response regulator receiver domain AM341_RS00540 PF06942 GlpM protein AM341_RS00550 PF13520 Amino acid permease AM341_RS00560 PF07338 Protein of unknown function (DUF1471) AM341_RS00565 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM341_RS00565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM341_RS00565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM341_RS00570 PF02233 NAD(P) transhydrogenase beta subunit AM341_RS00575 PF01594 AI-2E family transporter AM341_RS00585 PF00893 Small Multidrug Resistance protein AM341_RS00590 PF00893 Small Multidrug Resistance protein AM341_RS00595 PF00089 Trypsin AM341_RS00615 PF07690 Major Facilitator Superfamily AM341_RS00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS00620 PF03466 LysR substrate binding domain AM341_RS00625 PF00480 ROK family AM341_RS00635 PF00654 Voltage gated chloride channel AM341_RS00640 PF02613 Nitrate reductase delta subunit AM341_RS00645 PF04976 DMSO reductase anchor subunit (DmsC) AM341_RS00650 PF13247 4Fe-4S dicluster domain AM341_RS00650 PF12800 4Fe-4S binding domain AM341_RS00655 PF00384 Molybdopterin oxidoreductase AM341_RS00655 PF01568 Molydopterin dinucleotide binding domain AM341_RS00655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM341_RS00660 PF01568 Molydopterin dinucleotide binding domain AM341_RS00660 PF00384 Molybdopterin oxidoreductase AM341_RS00660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM341_RS00665 PF06649 Protein of unknown function (DUF1161) AM341_RS00670 PF06788 Uncharacterised protein family (UPF0257) AM341_RS00675 PF13302 Acetyltransferase (GNAT) domain AM341_RS00680 PF06932 Protein of unknown function (DUF1283) AM341_RS00685 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM341_RS00695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM341_RS00695 PF13378 Enolase C-terminal domain-like AM341_RS00700 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS00700 PF00107 Zinc-binding dehydrogenase AM341_RS00705 PF07690 Major Facilitator Superfamily AM341_RS00705 PF00083 Sugar (and other) transporter AM341_RS00710 PF08125 Mannitol dehydrogenase C-terminal domain AM341_RS00710 PF01232 Mannitol dehydrogenase Rossmann domain AM341_RS00715 PF14001 YdfZ protein AM341_RS00720 PF07729 FCD domain AM341_RS00720 PF00392 Bacterial regulatory proteins, gntR family AM341_RS00725 PF00106 short chain dehydrogenase AM341_RS00730 PF01432 Peptidase family M3 AM341_RS00735 PF02464 Competence-damaged protein AM341_RS00740 PF04076 Bacterial OB fold (BOF) protein AM341_RS00745 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS00755 PF07690 Major Facilitator Superfamily AM341_RS00760 PF00892 EamA-like transporter family AM341_RS00765 PF13999 MarB protein AM341_RS00770 PF12833 Helix-turn-helix domain AM341_RS00775 PF01047 MarR family AM341_RS00780 PF01914 MarC family integral membrane protein AM341_RS00785 PF07690 Major Facilitator Superfamily AM341_RS00795 PF03466 LysR substrate binding domain AM341_RS00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS00800 PF00171 Aldehyde dehydrogenase family AM341_RS00805 PF04960 Glutaminase AM341_RS00810 PF13811 Domain of unknown function (DUF4186) AM341_RS00815 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS00825 PF08125 Mannitol dehydrogenase C-terminal domain AM341_RS00825 PF01232 Mannitol dehydrogenase Rossmann domain AM341_RS00835 PF01062 Bestrophin, RFP-TM, chloride channel AM341_RS00840 PF13649 Methyltransferase domain AM341_RS00845 PF03992 Antibiotic biosynthesis monooxygenase AM341_RS00850 PF01791 DeoC/LacD family aldolase AM341_RS00855 PF13407 Periplasmic binding protein domain AM341_RS00860 PF02653 Branched-chain amino acid transport system / permease component AM341_RS00865 PF02653 Branched-chain amino acid transport system / permease component AM341_RS00870 PF00005 ABC transporter AM341_RS00875 PF04198 Putative sugar-binding domain AM341_RS00880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS00880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS00885 PF13018 Extended Signal Peptide of Type V secretion system AM341_RS00890 PF03797 Autotransporter beta-domain AM341_RS00895 PF01381 Helix-turn-helix AM341_RS00900 PF13657 HipA N-terminal domain AM341_RS00900 PF07804 HipA-like C-terminal domain AM341_RS00910 PF13953 PapC C-terminal domain AM341_RS00910 PF00577 Outer membrane usher protein AM341_RS00915 PF00419 Fimbrial protein AM341_RS00920 PF00419 Fimbrial protein AM341_RS00925 PF09160 FimH, mannose binding AM341_RS00930 PF00384 Molybdopterin oxidoreductase AM341_RS00935 PF17073 Two-component-system connector protein AM341_RS00940 PF12833 Helix-turn-helix domain AM341_RS00945 PF00884 Sulfatase AM341_RS00950 PF04055 Radical SAM superfamily AM341_RS00950 PF13186 Iron-sulfur cluster-binding domain AM341_RS00955 PF06472 ABC transporter transmembrane region 2 AM341_RS00955 PF00005 ABC transporter AM341_RS00960 PF07715 TonB-dependent Receptor Plug Domain AM341_RS00965 PF00675 Insulinase (Peptidase family M16) AM341_RS00965 PF05193 Peptidase M16 inactive domain AM341_RS00970 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM341_RS00975 PF13520 Amino acid permease AM341_RS00980 PF02638 Glycosyl hydrolase-like 10 AM341_RS00985 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS00990 PF13426 PAS domain AM341_RS00990 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS00990 PF00563 EAL domain AM341_RS00995 PF01427 D-ala-D-ala dipeptidase AM341_RS01000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS01010 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS01010 PF12911 N-terminal TM domain of oligopeptide transport permease C AM341_RS01015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM341_RS01015 PF00005 ABC transporter AM341_RS01020 PF00005 ABC transporter AM341_RS01020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM341_RS01025 PF02566 OsmC-like protein AM341_RS01035 PF10684 Putative biofilm-dependent modulation protein AM341_RS01040 PF08136 30S ribosomal protein subunit S22 family AM341_RS01045 PF03949 Malic enzyme, NAD binding domain AM341_RS01045 PF00390 Malic enzyme, N-terminal domain AM341_RS01050 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS01050 PF00107 Zinc-binding dehydrogenase AM341_RS01055 PF01381 Helix-turn-helix AM341_RS01060 PF01292 Prokaryotic cytochrome b561 AM341_RS01065 PF13247 4Fe-4S dicluster domain AM341_RS01065 PF09163 Formate dehydrogenase N, transmembrane AM341_RS01065 PF12800 4Fe-4S binding domain AM341_RS01075 PF00892 EamA-like transporter family AM341_RS01080 PF00267 Gram-negative porin AM341_RS01095 PF07690 Major Facilitator Superfamily AM341_RS01105 PF13247 4Fe-4S dicluster domain AM341_RS01105 PF14711 Respiratory nitrate reductase beta C-terminal AM341_RS01110 PF02613 Nitrate reductase delta subunit AM341_RS01115 PF02665 Nitrate reductase gamma subunit AM341_RS01120 PF02567 Phenazine biosynthesis-like protein AM341_RS01125 PF00797 N-acetyltransferase AM341_RS01130 PF01613 Flavin reductase like domain AM341_RS01135 PF01361 Tautomerase enzyme AM341_RS01140 PF01609 Transposase DDE domain AM341_RS01140 PF13808 DDE_Tnp_1-associated AM341_RS01155 PF03527 RHS protein AM341_RS01155 PF14220 Domain of unknown function (DUF4329) AM341_RS01155 PF05593 RHS Repeat AM341_RS01160 PF04717 Type VI secretion system, phage-baseplate injector AM341_RS01165 PF17520 Family of unknown function (DUF5445) AM341_RS01170 PF13417 Glutathione S-transferase, N-terminal domain AM341_RS01175 PF00324 Amino acid permease AM341_RS01195 PF00593 TonB dependent receptor AM341_RS01195 PF07715 TonB-dependent Receptor Plug Domain AM341_RS01200 PF07729 FCD domain AM341_RS01200 PF00392 Bacterial regulatory proteins, gntR family AM341_RS01205 PF00107 Zinc-binding dehydrogenase AM341_RS01205 PF16884 N-terminal domain of oxidoreductase AM341_RS01215 PF00583 Acetyltransferase (GNAT) family AM341_RS01220 PF04657 Putative inner membrane exporter, YdcZ AM341_RS01225 PF10735 Protein of unknown function (DUF2526) AM341_RS01230 PF10753 Toxin GhoT_OrtT AM341_RS01245 PF00171 Aldehyde dehydrogenase family AM341_RS01250 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS01255 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS01260 PF08402 TOBE domain AM341_RS01260 PF00005 ABC transporter AM341_RS01265 PF13416 Bacterial extracellular solute-binding protein AM341_RS01270 PF00155 Aminotransferase class I and II AM341_RS01270 PF00392 Bacterial regulatory proteins, gntR family AM341_RS01275 PF01381 Helix-turn-helix AM341_RS01275 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AM341_RS01280 PF07927 HicA toxin of bacterial toxin-antitoxin, AM341_RS01285 PF10829 Protein of unknown function (DUF2554) AM341_RS01290 PF01136 Peptidase family U32 AM341_RS01290 PF12392 Collagenase AM341_RS01295 PF07883 Cupin domain AM341_RS01295 PF01381 Helix-turn-helix AM341_RS01300 PF03594 Benzoate membrane transport protein AM341_RS01305 PF07282 Putative transposase DNA-binding domain AM341_RS01305 PF01385 Probable transposase AM341_RS01305 PF12323 Helix-turn-helix domain AM341_RS01315 PF11769 Protein of unknown function (DUF3313) AM341_RS01320 PF03848 Tellurite resistance protein TehB AM341_RS01325 PF03595 Voltage-dependent anion channel AM341_RS01330 PF18836 Beta solenoid repeat from YDCK AM341_RS01335 PF13302 Acetyltransferase (GNAT) domain AM341_RS01340 PF04325 Protein of unknown function (DUF465) AM341_RS01350 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM341_RS01360 PF07063 Domain of unknown function (DUF1338) AM341_RS01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS01365 PF03466 LysR substrate binding domain AM341_RS01370 PF00672 HAMP domain AM341_RS01370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM341_RS01370 PF02203 Tar ligand binding domain homologue AM341_RS01375 PF01848 Hok/gef family AM341_RS01385 PF01292 Prokaryotic cytochrome b561 AM341_RS01390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM341_RS01390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM341_RS01405 PF00171 Aldehyde dehydrogenase family AM341_RS01410 PF02698 DUF218 domain AM341_RS01415 PF00271 Helicase conserved C-terminal domain AM341_RS01415 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM341_RS01415 PF04408 Helicase associated domain (HA2) AM341_RS01415 PF11898 Domain of unknown function (DUF3418) AM341_RS01415 PF00270 DEAD/DEAH box helicase AM341_RS01420 PF02525 Flavodoxin-like fold AM341_RS01425 PF00782 Dual specificity phosphatase, catalytic domain AM341_RS01430 PF12146 Serine aminopeptidase, S33 AM341_RS01430 PF12147 Putative methyltransferase AM341_RS01440 PF01066 CDP-alcohol phosphatidyltransferase AM341_RS01445 PF10971 Protein of unknown function (DUF2773) AM341_RS01450 PF00248 Aldo/keto reductase family AM341_RS01480 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS01485 PF07848 PaaX-like protein AM341_RS01485 PF08223 PaaX-like protein C-terminal domain AM341_RS01490 PF00501 AMP-binding enzyme AM341_RS01490 PF14535 AMP-binding enzyme C-terminal domain AM341_RS01495 PF02803 Thiolase, C-terminal domain AM341_RS01495 PF00108 Thiolase, N-terminal domain AM341_RS01500 PF03061 Thioesterase superfamily AM341_RS01505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM341_RS01505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM341_RS01505 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM341_RS01510 PF00378 Enoyl-CoA hydratase/isomerase AM341_RS01515 PF00378 Enoyl-CoA hydratase/isomerase AM341_RS01520 PF00970 Oxidoreductase FAD-binding domain AM341_RS01520 PF00111 2Fe-2S iron-sulfur cluster binding domain AM341_RS01520 PF00175 Oxidoreductase NAD-binding domain AM341_RS01525 PF01883 Iron-sulfur cluster assembly protein AM341_RS01530 PF05138 Phenylacetic acid catabolic protein AM341_RS01535 PF06243 Phenylacetic acid degradation B AM341_RS01540 PF05138 Phenylacetic acid catabolic protein AM341_RS01545 PF00171 Aldehyde dehydrogenase family AM341_RS01545 PF01575 MaoC like domain AM341_RS01550 PF02727 Copper amine oxidase, N2 domain AM341_RS01550 PF01179 Copper amine oxidase, enzyme domain AM341_RS01550 PF02728 Copper amine oxidase, N3 domain AM341_RS01550 PF07833 Copper amine oxidase N-terminal domain AM341_RS01555 PF00171 Aldehyde dehydrogenase family AM341_RS01560 PF14525 AraC-binding-like domain AM341_RS01560 PF12833 Helix-turn-helix domain AM341_RS01565 PF07027 Protein of unknown function (DUF1318) AM341_RS01570 PF13617 YnbE-like lipoprotein AM341_RS01575 PF11739 Dicarboxylate transport AM341_RS01580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM341_RS01580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM341_RS01585 PF03724 META domain AM341_RS01590 PF03891 Domain of unknown function (DUF333) AM341_RS01595 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM341_RS01595 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AM341_RS01595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM341_RS01595 PF10371 Domain of unknown function AM341_RS01595 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AM341_RS01605 PF00267 Gram-negative porin AM341_RS01610 PF00582 Universal stress protein family AM341_RS01615 PF01171 PP-loop family AM341_RS01620 PF00270 DEAD/DEAH box helicase AM341_RS01620 PF00271 Helicase conserved C-terminal domain AM341_RS01620 PF03880 DbpA RNA binding domain AM341_RS01630 PF01544 CorA-like Mg2+ transporter protein AM341_RS01635 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS01635 PF08448 PAS fold AM341_RS01640 PF01713 Smr domain AM341_RS01650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS01650 PF03466 LysR substrate binding domain AM341_RS01655 PF01546 Peptidase family M20/M25/M40 AM341_RS01655 PF07687 Peptidase dimerisation domain AM341_RS01660 PF01546 Peptidase family M20/M25/M40 AM341_RS01670 PF03806 AbgT putative transporter family AM341_RS01675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM341_RS01675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM341_RS01680 PF00325 Bacterial regulatory proteins, crp family AM341_RS01680 PF00027 Cyclic nucleotide-binding domain AM341_RS01685 PF00582 Universal stress protein family AM341_RS01690 PF10749 Protein of unknown function (DUF2534) AM341_RS01695 PF00924 Mechanosensitive ion channel AM341_RS01700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS01705 PF13737 Transposase DDE domain AM341_RS01710 PF03466 LysR substrate binding domain AM341_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS01715 PF12146 Serine aminopeptidase, S33 AM341_RS01725 PF00246 Zinc carboxypeptidase AM341_RS01730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM341_RS01730 PF13378 Enolase C-terminal domain-like AM341_RS01735 PF08534 Redoxin AM341_RS01740 PF00158 Sigma-54 interaction domain AM341_RS01740 PF13188 PAS domain AM341_RS01740 PF18024 Helix-turn-helix domain AM341_RS01745 PF05128 Domain of unknown function (DUF697) AM341_RS01750 PF04317 YcjX-like family, DUF463 AM341_RS01755 PF00356 Bacterial regulatory proteins, lacI family AM341_RS01755 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM341_RS01760 PF09381 Outer membrane protein G (OmpG) AM341_RS01765 PF00005 ABC transporter AM341_RS01765 PF03459 TOBE domain AM341_RS01765 PF17912 MalK OB fold domain AM341_RS01770 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS01775 PF03632 Glycosyl hydrolase family 65 central catalytic domain AM341_RS01775 PF03636 Glycosyl hydrolase family 65, N-terminal domain AM341_RS01775 PF03633 Glycosyl hydrolase family 65, C-terminal domain AM341_RS01780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM341_RS01780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM341_RS01785 PF01261 Xylose isomerase-like TIM barrel AM341_RS01790 PF00107 Zinc-binding dehydrogenase AM341_RS01795 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS01800 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS01810 PF00128 Alpha amylase, catalytic domain AM341_RS01815 PF00581 Rhodanese-like domain AM341_RS01820 PF09584 Phage shock protein PspD (Phageshock_PspD) AM341_RS01825 PF04024 PspC domain AM341_RS01830 PF06667 Phage shock protein B AM341_RS01835 PF04012 PspA/IM30 family AM341_RS01840 PF00158 Sigma-54 interaction domain AM341_RS01840 PF02954 Bacterial regulatory protein, Fis family AM341_RS01845 PF00202 Aminotransferase class-III AM341_RS01850 PF01266 FAD dependent oxidoreductase AM341_RS01855 PF00171 Aldehyde dehydrogenase family AM341_RS01865 PF01381 Helix-turn-helix AM341_RS01865 PF07883 Cupin domain AM341_RS01870 PF07722 Peptidase C26 AM341_RS01875 PF00120 Glutamine synthetase, catalytic domain AM341_RS01880 PF00324 Amino acid permease AM341_RS01885 PF10820 Protein of unknown function (DUF2543) AM341_RS01895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS01900 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS01905 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS01905 PF12911 N-terminal TM domain of oligopeptide transport permease C AM341_RS01910 PF00005 ABC transporter AM341_RS01910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM341_RS01915 PF00005 ABC transporter AM341_RS01920 PF04480 Protein of unknown function (DUF559) AM341_RS01935 PF08206 Ribonuclease B OB domain AM341_RS01935 PF17876 Cold shock domain AM341_RS01935 PF00575 S1 RNA binding domain AM341_RS01935 PF00773 RNB domain AM341_RS01945 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS01945 PF13426 PAS domain AM341_RS01945 PF00563 EAL domain AM341_RS01955 PF08220 DeoR-like helix-turn-helix domain AM341_RS01955 PF00455 DeoR C terminal sensor domain AM341_RS01960 PF05433 Glycine zipper 2TM domain AM341_RS01965 PF01253 Translation initiation factor SUI1 AM341_RS01970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM341_RS01975 PF18073 Rubredoxin metal binding domain AM341_RS01980 PF06305 Lipopolysaccharide assembly protein A domain AM341_RS01985 PF01569 PAP2 superfamily AM341_RS01990 PF00925 GTP cyclohydrolase II AM341_RS01995 PF00330 Aconitase family (aconitate hydratase) AM341_RS01995 PF00694 Aconitase C-terminal domain AM341_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS02025 PF03466 LysR substrate binding domain AM341_RS02035 PF08272 Topoisomerase I zinc-ribbon-like AM341_RS02035 PF01751 Toprim domain AM341_RS02035 PF01396 Topoisomerase DNA binding C4 zinc finger AM341_RS02035 PF01131 DNA topoisomerase AM341_RS02045 PF10692 Protein of unknown function (DUF2498) AM341_RS02050 PF01343 Peptidase family S49 AM341_RS02050 PF08496 Peptidase family S49 N-terminal AM341_RS02055 PF00106 short chain dehydrogenase AM341_RS02060 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM341_RS02060 PF12557 Cob(I)alamin adenosyltransferase N terminal AM341_RS02065 PF01479 S4 domain AM341_RS02065 PF00849 RNA pseudouridylate synthase AM341_RS02070 PF09972 Predicted membrane protein (DUF2207) AM341_RS02075 PF01300 Telomere recombination AM341_RS02080 PF02811 PHP domain AM341_RS02085 PF08255 Trp-operon Leader Peptide AM341_RS02090 PF00425 chorismate binding enzyme AM341_RS02090 PF04715 Anthranilate synthase component I, N terminal region AM341_RS02095 PF00117 Glutamine amidotransferase class-I AM341_RS02095 PF02885 Glycosyl transferase family, helical bundle domain AM341_RS02095 PF00591 Glycosyl transferase family, a/b domain AM341_RS02100 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM341_RS02100 PF00218 Indole-3-glycerol phosphate synthase AM341_RS02105 PF00291 Pyridoxal-phosphate dependent enzyme AM341_RS02110 PF00290 Tryptophan synthase alpha chain AM341_RS02115 PF10685 Stress-induced bacterial acidophilic repeat motif AM341_RS02120 PF05974 Domain of unknown function (DUF892) AM341_RS02125 PF05974 Domain of unknown function (DUF892) AM341_RS02130 PF03922 OmpW family AM341_RS02145 PF04279 Intracellular septation protein A AM341_RS02150 PF03061 Thioesterase superfamily AM341_RS02155 PF03544 Gram-negative bacterial TonB protein C-terminal AM341_RS02160 PF03795 YCII-related domain AM341_RS02165 PF02254 TrkA-N domain AM341_RS02165 PF07885 Ion channel AM341_RS02175 PF13091 PLD-like domain AM341_RS02175 PF13396 Phospholipase_D-nuclease N-terminal AM341_RS02180 PF04269 Protein of unknown function, DUF440 AM341_RS02185 PF00005 ABC transporter AM341_RS02185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM341_RS02190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM341_RS02190 PF00005 ABC transporter AM341_RS02195 PF12911 N-terminal TM domain of oligopeptide transport permease C AM341_RS02195 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS02200 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS02205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS02215 PF01914 MarC family integral membrane protein AM341_RS02220 PF00171 Aldehyde dehydrogenase family AM341_RS02220 PF00465 Iron-containing alcohol dehydrogenase AM341_RS02230 PF00265 Thymidine kinase AM341_RS02235 PF00816 H-NS histone family AM341_RS02240 PF00483 Nucleotidyl transferase AM341_RS02245 PF00072 Response regulator receiver domain AM341_RS02250 PF01734 Patatin-like phospholipase AM341_RS02255 PF02810 SEC-C motif AM341_RS02260 PF00551 Formyl transferase AM341_RS02260 PF01842 ACT domain AM341_RS02295 PF02665 Nitrate reductase gamma subunit AM341_RS02300 PF02613 Nitrate reductase delta subunit AM341_RS02305 PF14711 Respiratory nitrate reductase beta C-terminal AM341_RS02305 PF13247 4Fe-4S dicluster domain AM341_RS02310 PF14710 Respiratory nitrate reductase alpha N-terminal AM341_RS02310 PF01568 Molydopterin dinucleotide binding domain AM341_RS02310 PF00384 Molybdopterin oxidoreductase AM341_RS02315 PF07690 Major Facilitator Superfamily AM341_RS02325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM341_RS02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS02325 PF07730 Histidine kinase AM341_RS02325 PF00672 HAMP domain AM341_RS02330 PF00196 Bacterial regulatory proteins, luxR family AM341_RS02330 PF00072 Response regulator receiver domain AM341_RS02335 PF11924 Inverse autotransporter, beta-domain AM341_RS02340 PF02635 DsrE/DsrF-like family AM341_RS02345 PF04752 ChaC-like protein AM341_RS02350 PF06150 ChaB AM341_RS02355 PF01699 Sodium/calcium exchanger protein AM341_RS02360 PF13940 Toxin Ldr, type I toxin-antitoxin system AM341_RS02365 PF13940 Toxin Ldr, type I toxin-antitoxin system AM341_RS02380 PF00793 DAHP synthetase I family AM341_RS02385 PF13369 Transglutaminase-like superfamily AM341_RS02390 PF04247 Invasion gene expression up-regulator, SirB AM341_RS02395 PF13847 Methyltransferase domain AM341_RS02395 PF17827 PrmC N-terminal domain AM341_RS02400 PF03462 PCRF domain AM341_RS02400 PF00472 RF-1 domain AM341_RS02405 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM341_RS02405 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM341_RS02405 PF01488 Shikimate / quinate 5-dehydrogenase AM341_RS02410 PF03550 Outer membrane lipoprotein LolB AM341_RS02415 PF00288 GHMP kinases N terminal domain AM341_RS02415 PF08544 GHMP kinases C terminal AM341_RS02425 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM341_RS02425 PF14572 Phosphoribosyl synthetase-associated domain AM341_RS02435 PF01740 STAS domain AM341_RS02435 PF00916 Sulfate permease family AM341_RS02440 PF10762 Protein of unknown function (DUF2583) AM341_RS02445 PF01195 Peptidyl-tRNA hydrolase AM341_RS02450 PF01926 50S ribosome-binding GTPase AM341_RS02450 PF06071 Protein of unknown function (DUF933) AM341_RS02465 PF03797 Autotransporter beta-domain AM341_RS02465 PF03212 Pertactin AM341_RS02470 PF02954 Bacterial regulatory protein, Fis family AM341_RS02470 PF00989 PAS fold AM341_RS02470 PF00158 Sigma-54 interaction domain AM341_RS02475 PF02733 Dak1 domain AM341_RS02480 PF02734 DAK2 domain AM341_RS02485 PF05524 PEP-utilising enzyme, N-terminal AM341_RS02485 PF00391 PEP-utilising enzyme, mobile domain AM341_RS02485 PF00381 PTS HPr component phosphorylation site AM341_RS02485 PF03610 PTS system fructose IIA component AM341_RS02495 PF01204 Trehalase AM341_RS02505 PF04226 Transglycosylase associated protein AM341_RS02510 PF07238 PilZ domain AM341_RS02510 PF07317 Flagellar regulator YcgR AM341_RS02515 PF01464 Transglycosylase SLT domain AM341_RS02525 PF02016 LD-carboxypeptidase N-terminal domain AM341_RS02525 PF17676 LD-carboxypeptidase C-terminal domain AM341_RS02530 PF00999 Sodium/hydrogen exchanger family AM341_RS02530 PF02080 TrkA-C domain AM341_RS02530 PF03471 Transporter associated domain AM341_RS02540 PF01168 Alanine racemase, N-terminal domain AM341_RS02540 PF00842 Alanine racemase, C-terminal domain AM341_RS02545 PF01266 FAD dependent oxidoreductase AM341_RS02550 PF04293 SpoVR like protein AM341_RS02555 PF00392 Bacterial regulatory proteins, gntR family AM341_RS02555 PF07840 FadR C-terminal domain AM341_RS02560 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM341_RS02565 PF02600 Disulfide bond formation protein DsbB AM341_RS02570 PF00817 impB/mucB/samB family AM341_RS02570 PF11799 impB/mucB/samB family C-terminal domain AM341_RS02570 PF11798 IMS family HHH motif AM341_RS02570 PF13438 Domain of unknown function (DUF4113) AM341_RS02575 PF00717 Peptidase S24-like AM341_RS02580 PF06109 Haemolysin E (HlyE) AM341_RS02585 PF03692 Putative zinc- or iron-chelating domain AM341_RS02590 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM341_RS02595 PF05166 YcgL domain AM341_RS02600 PF04151 Bacterial pre-peptidase C-terminal domain AM341_RS02605 PF05666 Fels-1 Prophage Protein-like AM341_RS02615 PF05209 Septum formation inhibitor MinC, N-terminal domain AM341_RS02615 PF03775 Septum formation inhibitor MinC, C-terminal domain AM341_RS02620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM341_RS02625 PF03776 Septum formation topological specificity factor MinE AM341_RS02650 PF13436 Glycine-zipper domain AM341_RS02665 PF03797 Autotransporter beta-domain AM341_RS02680 PF00563 EAL domain AM341_RS02680 PF12792 CSS motif domain associated with EAL AM341_RS02690 PF10798 Biofilm development protein YmgB/AriR AM341_RS02700 PF10798 Biofilm development protein YmgB/AriR AM341_RS02705 PF00563 EAL domain AM341_RS02705 PF04940 Sensors of blue-light using FAD AM341_RS02710 PF13411 MerR HTH family regulatory protein AM341_RS02715 PF07166 Protein of unknown function (DUF1398) AM341_RS02725 PF00180 Isocitrate/isopropylmalate dehydrogenase AM341_RS02730 PF00849 RNA pseudouridylate synthase AM341_RS02735 PF00293 NUDIX domain AM341_RS02745 PF04356 Protein of unknown function (DUF489) AM341_RS02750 PF08328 Adenylosuccinate lyase C-terminal AM341_RS02750 PF00206 Lyase AM341_RS02755 PF00072 Response regulator receiver domain AM341_RS02755 PF00486 Transcriptional regulatory protein, C terminal AM341_RS02760 PF08918 PhoQ Sensor AM341_RS02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS02765 PF08007 Cupin superfamily protein AM341_RS02770 PF07687 Peptidase dimerisation domain AM341_RS02770 PF01546 Peptidase family M20/M25/M40 AM341_RS02780 PF08402 TOBE domain AM341_RS02780 PF00005 ABC transporter AM341_RS02785 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS02795 PF08242 Methyltransferase domain AM341_RS02825 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM341_RS02845 PF06316 Enterobacterial Ail/Lom protein AM341_RS02950 PF06291 Bor protein AM341_RS02955 PF06085 Lipoprotein Rz1 precursor AM341_RS02965 PF00959 Phage lysozyme AM341_RS02970 PF07041 Protein of unknown function (DUF1327) AM341_RS02975 PF04971 Bacteriophage P21 holin S AM341_RS03010 PF03589 Antitermination protein AM341_RS03015 PF05866 Endodeoxyribonuclease RusA AM341_RS03020 PF06147 Protein of unknown function (DUF968) AM341_RS03030 PF01848 Hok/gef family AM341_RS03065 PF17948 DnaT DNA-binding domain AM341_RS03105 PF05358 DicB protein AM341_RS03110 PF07358 Protein of unknown function (DUF1482) AM341_RS03115 PF06630 Enterobacterial exodeoxyribonuclease VIII AM341_RS03115 PF12684 PDDEXK-like domain of unknown function (DUF3799) AM341_RS03125 PF00589 Phage integrase family AM341_RS03125 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain AM341_RS03130 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS03135 PF13416 Bacterial extracellular solute-binding protein AM341_RS03140 PF12158 Protein of unknown function (DUF3592) AM341_RS03145 PF04536 TPM domain AM341_RS03150 PF02146 Sir2 family AM341_RS03155 PF00480 ROK family AM341_RS03160 PF12704 MacB-like periplasmic core domain AM341_RS03160 PF02687 FtsX-like permease family AM341_RS03165 PF00005 ABC transporter AM341_RS03170 PF12704 MacB-like periplasmic core domain AM341_RS03170 PF02687 FtsX-like permease family AM341_RS03175 PF01757 Acyltransferase family AM341_RS03180 PF02559 CarD-like/TRCF domain AM341_RS03180 PF03461 TRCF domain AM341_RS03180 PF00270 DEAD/DEAH box helicase AM341_RS03180 PF17757 UvrB interaction domain AM341_RS03180 PF00271 Helicase conserved C-terminal domain AM341_RS03185 PF17969 L,D-transpeptidase C-terminal domain AM341_RS03185 PF03734 L,D-transpeptidase catalytic domain AM341_RS03185 PF01476 LysM domain AM341_RS03190 PF07338 Protein of unknown function (DUF1471) AM341_RS03195 PF00440 Bacterial regulatory proteins, tetR family AM341_RS03200 PF05433 Glycine zipper 2TM domain AM341_RS03205 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS03215 PF05728 Uncharacterised protein family (UPF0227) AM341_RS03220 PF00933 Glycosyl hydrolase family 3 N terminal domain AM341_RS03225 PF01636 Phosphotransferase enzyme family AM341_RS03230 PF13036 Peptidoglycan-synthase activator LpoB AM341_RS03235 PF07233 Protein of unknown function (DUF1425) AM341_RS03240 PF01230 HIT domain AM341_RS03245 PF00593 TonB dependent receptor AM341_RS03245 PF07715 TonB-dependent Receptor Plug Domain AM341_RS03250 PF00367 phosphotransferase system, EIIB AM341_RS03250 PF02378 Phosphotransferase system, EIIC AM341_RS03255 PF01026 TatD related DNase AM341_RS03260 PF09115 DNA polymerase III, delta subunit, C terminal AM341_RS03265 PF02223 Thymidylate kinase AM341_RS03270 PF02618 YceG-like family AM341_RS03275 PF01063 Amino-transferase class IV AM341_RS03280 PF00109 Beta-ketoacyl synthase, N-terminal domain AM341_RS03280 PF02801 Beta-ketoacyl synthase, C-terminal domain AM341_RS03285 PF00550 Phosphopantetheine attachment site AM341_RS03295 PF00698 Acyl transferase domain AM341_RS03300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM341_RS03300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM341_RS03305 PF02504 Fatty acid synthesis protein AM341_RS03310 PF01783 Ribosomal L32p protein family AM341_RS03315 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM341_RS03320 PF02545 Maf-like protein AM341_RS03325 PF00849 RNA pseudouridylate synthase AM341_RS03325 PF01479 S4 domain AM341_RS03340 PF00575 S1 RNA binding domain AM341_RS03340 PF12111 Polyribonucleotide phosphorylase C terminal AM341_RS03340 PF10150 Ribonuclease E/G family AM341_RS03345 PF00669 Bacterial flagellin N-terminal helical region AM341_RS03350 PF00460 Flagella basal body rod protein AM341_RS03350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM341_RS03355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM341_RS03355 PF10135 Rod binding protein AM341_RS03360 PF02119 Flagellar P-ring protein AM341_RS03365 PF02107 Flagellar L-ring protein AM341_RS03370 PF00460 Flagella basal body rod protein AM341_RS03370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM341_RS03375 PF00460 Flagella basal body rod protein AM341_RS03375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM341_RS03380 PF07559 Flagellar basal body protein FlaE AM341_RS03380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM341_RS03380 PF00460 Flagella basal body rod protein AM341_RS03385 PF13861 FlgD Tudor-like domain AM341_RS03385 PF13860 FlgD Ig-like domain AM341_RS03385 PF03963 Flagellar hook capping protein - N-terminal region AM341_RS03390 PF00460 Flagella basal body rod protein AM341_RS03390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM341_RS03395 PF00460 Flagella basal body rod protein AM341_RS03400 PF13144 Chaperone for flagella basal body P-ring formation AM341_RS03405 PF04316 Anti-sigma-28 factor, FlgM AM341_RS03410 PF05130 FlgN protein AM341_RS03415 PF03023 Lipid II flippase MurJ AM341_RS03420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM341_RS03425 PF04337 Protein of unknown function, DUF480 AM341_RS03430 PF13302 Acetyltransferase (GNAT) domain AM341_RS03435 PF07690 Major Facilitator Superfamily AM341_RS03440 PF13417 Glutathione S-transferase, N-terminal domain AM341_RS03440 PF04399 Glutaredoxin 2, C terminal domain AM341_RS03445 PF07273 Protein of unknown function (DUF1439) AM341_RS03450 PF01979 Amidohydrolase family AM341_RS03455 PF06183 DinI-like family AM341_RS03465 PF13991 BssS protein family AM341_RS03470 PF01266 FAD dependent oxidoreductase AM341_RS03475 PF10968 Protein of unknown function (DUF2770) AM341_RS03480 PF01292 Prokaryotic cytochrome b561 AM341_RS03485 PF04264 YceI-like domain AM341_RS03490 PF17773 UPF0176 acylphosphatase like domain AM341_RS03490 PF00581 Rhodanese-like domain AM341_RS03490 PF12368 Rhodanase C-terminal AM341_RS03495 PF03279 Bacterial lipid A biosynthesis acyltransferase AM341_RS03500 PF07690 Major Facilitator Superfamily AM341_RS03505 PF13984 MsyB protein AM341_RS03510 PF07119 Protein of unknown function (DUF1375) AM341_RS03515 PF00535 Glycosyl transferase family 2 AM341_RS03520 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM341_RS03535 PF01757 Acyltransferase family AM341_RS03540 PF13091 PLD-like domain AM341_RS03545 PF01661 Macro domain AM341_RS03555 PF10610 Thin aggregative fimbriae synthesis protein AM341_RS03560 PF07012 Curlin associated repeat AM341_RS03565 PF07012 Curlin associated repeat AM341_RS03580 PF00196 Bacterial regulatory proteins, luxR family AM341_RS03585 PF10627 Curli assembly protein CsgE AM341_RS03590 PF10614 Type VIII secretion system (T8SS), CsgF protein AM341_RS03595 PF03783 Curli production assembly/transport component CsgG AM341_RS03600 PF06496 Protein of unknown function (DUF1097) AM341_RS03605 PF02613 Nitrate reductase delta subunit AM341_RS03610 PF02811 PHP domain AM341_RS03615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM341_RS03645 PF17158 Membrane-associated sensor, integral membrane domain AM341_RS03645 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS03655 PF14883 Hypothetical glycosyl hydrolase family 13 AM341_RS03655 PF01522 Polysaccharide deacetylase AM341_RS03660 PF00535 Glycosyl transferase family 2 AM341_RS03665 PF13994 PgaD-like protein AM341_RS03670 PF02562 PhoH-like protein AM341_RS03680 PF04261 Dyp-type peroxidase family AM341_RS03685 PF09375 Imelysin AM341_RS03685 PF13473 Cupredoxin-like domain AM341_RS03690 PF03239 Iron permease FTR1 family AM341_RS03705 PF00474 Sodium:solute symporter family AM341_RS03720 PF01619 Proline dehydrogenase AM341_RS03720 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM341_RS03720 PF00171 Aldehyde dehydrogenase family AM341_RS03720 PF14850 DNA-binding domain of Proline dehydrogenase AM341_RS03725 PF08362 YcdC-like protein, C-terminal region AM341_RS03725 PF00440 Bacterial regulatory proteins, tetR family AM341_RS03730 PF00296 Luciferase-like monooxygenase AM341_RS03735 PF00857 Isochorismatase family AM341_RS03740 PF01042 Endoribonuclease L-PSP AM341_RS03745 PF12697 Alpha/beta hydrolase family AM341_RS03750 PF00881 Nitroreductase family AM341_RS03755 PF01613 Flavin reductase like domain AM341_RS03760 PF00860 Permease family AM341_RS03765 PF10685 Stress-induced bacterial acidophilic repeat motif AM341_RS03775 PF03358 NADPH-dependent FMN reductase AM341_RS03780 PF13993 YccJ-like protein AM341_RS03785 PF00328 Histidine phosphatase superfamily (branch 2) AM341_RS03795 PF00226 DnaJ domain AM341_RS03795 PF01556 DnaJ C terminal domain AM341_RS03805 PF02613 Nitrate reductase delta subunit AM341_RS03810 PF01568 Molydopterin dinucleotide binding domain AM341_RS03810 PF00384 Molybdopterin oxidoreductase AM341_RS03810 PF18364 Molybdopterin oxidoreductase N-terminal domain AM341_RS03815 PF03264 NapC/NirT cytochrome c family, N-terminal region AM341_RS03820 PF00486 Transcriptional regulatory protein, C terminal AM341_RS03820 PF00072 Response regulator receiver domain AM341_RS03825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM341_RS03830 PF00072 Response regulator receiver domain AM341_RS03830 PF00672 HAMP domain AM341_RS03830 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS03830 PF01627 Hpt domain AM341_RS03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS03835 PF12801 4Fe-4S binding domain AM341_RS03840 PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system AM341_RS03845 PF15939 Putative antitoxin of bacterial toxin-antitoxin system AM341_RS03855 PF00313 'Cold-shock' DNA-binding domain AM341_RS03860 PF00313 'Cold-shock' DNA-binding domain AM341_RS03870 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AM341_RS03875 PF06251 Capsule biosynthesis GfcC AM341_RS03880 PF06082 Exopolysaccharide biosynthesis protein YbjH AM341_RS03885 PF10531 SLBB domain AM341_RS03885 PF02563 Polysaccharide biosynthesis/export protein AM341_RS03885 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM341_RS03890 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM341_RS03895 PF13614 AAA domain AM341_RS03895 PF13807 G-rich domain on putative tyrosine kinase AM341_RS03895 PF02706 Chain length determinant protein AM341_RS03900 PF00328 Histidine phosphatase superfamily (branch 2) AM341_RS03905 PF08173 Membrane bound YbgT-like protein AM341_RS03910 PF02322 Cytochrome bd terminal oxidase subunit II AM341_RS03915 PF01654 Cytochrome bd terminal oxidase subunit I AM341_RS03920 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AM341_RS03925 PF07449 Hydrogenase-1 expression protein HyaE AM341_RS03930 PF01750 Hydrogenase maturation protease AM341_RS03935 PF01292 Prokaryotic cytochrome b561 AM341_RS03940 PF00374 Nickel-dependent hydrogenase AM341_RS03945 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM341_RS03945 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM341_RS03955 PF01027 Inhibitor of apoptosis-promoting Bax1 AM341_RS03960 PF04358 DsrC like protein AM341_RS03965 PF00708 Acylphosphatase AM341_RS03970 PF17785 PUA-like domain AM341_RS03970 PF10672 S-adenosylmethionine-dependent methyltransferase AM341_RS03975 PF08755 Hemimethylated DNA-binding protein YccV like AM341_RS03980 PF13380 CoA binding domain AM341_RS03985 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM341_RS03990 PF02142 MGS-like domain AM341_RS03995 PF13361 UvrD-like helicase C-terminal domain AM341_RS03995 PF00580 UvrD/REP helicase N-terminal domain AM341_RS03995 PF12462 DNA helicase IV / RNA helicase N terminal AM341_RS04000 PF03733 Inner membrane component domain AM341_RS04005 PF12805 FUSC-like inner membrane protein yccS AM341_RS04010 PF04994 TfoX C-terminal domain AM341_RS04010 PF04993 TfoX N-terminal domain AM341_RS04015 PF03846 Cell division inhibitor SulA AM341_RS04025 PF00691 OmpA family AM341_RS04025 PF01389 OmpA-like transmembrane domain AM341_RS04030 PF06303 MatP N-terminal domain AM341_RS04030 PF17414 MatP C-terminal ribbon-helix-helix domain AM341_RS04035 PF05362 Lon protease (S16) C-terminal proteolytic domain AM341_RS04035 PF13654 AAA domain AM341_RS04040 PF07977 FabA-like domain AM341_RS04045 PF04957 Ribosome modulation factor AM341_RS04050 PF03886 ABC-type transport auxiliary lipoprotein component AM341_RS04055 PF02470 MlaD protein AM341_RS04060 PF04403 Paraquat-inducible protein A AM341_RS04065 PF16326 ABC transporter C-terminal domain AM341_RS04065 PF12848 ABC transporter AM341_RS04065 PF00005 ABC transporter AM341_RS04070 PF01170 Putative RNA methylase family UPF0020 AM341_RS04070 PF02926 THUMP domain AM341_RS04070 PF10672 S-adenosylmethionine-dependent methyltransferase AM341_RS04075 PF03476 MOSC N-terminal beta barrel domain AM341_RS04075 PF00111 2Fe-2S iron-sulfur cluster binding domain AM341_RS04075 PF03473 MOSC domain AM341_RS04080 PF07126 Cell-division protein ZapC AM341_RS04085 PF01180 Dihydroorotate dehydrogenase AM341_RS04090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS04090 PF02753 Pili assembly chaperone PapD, C-terminal domain AM341_RS04095 PF00419 Fimbrial protein AM341_RS04100 PF00419 Fimbrial protein AM341_RS04105 PF00419 Fimbrial protein AM341_RS04110 PF13954 PapC N-terminal domain AM341_RS04110 PF00577 Outer membrane usher protein AM341_RS04110 PF13953 PapC C-terminal domain AM341_RS04115 PF02753 Pili assembly chaperone PapD, C-terminal domain AM341_RS04115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS04120 PF00419 Fimbrial protein AM341_RS04130 PF03358 NADPH-dependent FMN reductase AM341_RS04135 PF09084 NMT1/THI5 like AM341_RS04140 PF00296 Luciferase-like monooxygenase AM341_RS04145 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS04150 PF00005 ABC transporter AM341_RS04155 PF01433 Peptidase family M1 domain AM341_RS04155 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM341_RS04155 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM341_RS04160 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM341_RS04160 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM341_RS04165 PF01336 OB-fold nucleic acid binding domain AM341_RS04165 PF00152 tRNA synthetases class II (D, K and N) AM341_RS04170 PF00267 Gram-negative porin AM341_RS04180 PF00155 Aminotransferase class I and II AM341_RS04185 PF00753 Metallo-beta-lactamase superfamily AM341_RS04190 PF05951 Bacterial protein of unknown function (DUF882) AM341_RS04200 PF01471 Putative peptidoglycan binding domain AM341_RS04200 PF03734 L,D-transpeptidase catalytic domain AM341_RS04205 PF16330 MukB hinge domain AM341_RS04205 PF04310 MukB N-terminal AM341_RS04210 PF04288 MukE-like family AM341_RS04215 PF17192 MukF middle domain AM341_RS04215 PF17193 MukF C-terminal domain AM341_RS04215 PF03882 MukF winged-helix domain AM341_RS04220 PF13847 Methyltransferase domain AM341_RS04230 PF02698 DUF218 domain AM341_RS04235 PF01636 Phosphotransferase enzyme family AM341_RS04240 PF02348 Cytidylyltransferase AM341_RS04245 PF03966 Trm112p-like protein AM341_RS04250 PF06224 Winged helix DNA-binding domain AM341_RS04255 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM341_RS04260 PF00005 ABC transporter AM341_RS04260 PF00664 ABC transporter transmembrane region AM341_RS04265 PF03772 Competence protein AM341_RS04265 PF00753 Metallo-beta-lactamase superfamily AM341_RS04270 PF00216 Bacterial DNA-binding protein AM341_RS04275 PF00575 S1 RNA binding domain AM341_RS04280 PF02224 Cytidylate kinase AM341_RS04285 PF01435 Peptidase family M48 AM341_RS04290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM341_RS04295 PF00266 Aminotransferase class-V AM341_RS04300 PF04239 Protein of unknown function (DUF421) AM341_RS04305 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM341_RS04305 PF18381 YcaO cyclodehydratase C-terminal domain AM341_RS04310 PF01226 Formate/nitrite transporter AM341_RS04315 PF02901 Pyruvate formate lyase-like AM341_RS04315 PF01228 Glycine radical AM341_RS04320 PF04055 Radical SAM superfamily AM341_RS04325 PF02525 Flavodoxin-like fold AM341_RS04330 PF03466 LysR substrate binding domain AM341_RS04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS04335 PF13520 Amino acid permease AM341_RS04340 PF07690 Major Facilitator Superfamily AM341_RS04345 PF00857 Isochorismatase family AM341_RS04350 PF04976 DMSO reductase anchor subunit (DmsC) AM341_RS04355 PF12800 4Fe-4S binding domain AM341_RS04355 PF13247 4Fe-4S dicluster domain AM341_RS04360 PF01568 Molydopterin dinucleotide binding domain AM341_RS04360 PF00384 Molybdopterin oxidoreductase AM341_RS04360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM341_RS04365 PF02403 Seryl-tRNA synthetase N-terminal domain AM341_RS04365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM341_RS04370 PF00004 ATPase family associated with various cellular activities (AAA) AM341_RS04370 PF16193 AAA C-terminal domain AM341_RS04370 PF12002 MgsA AAA+ ATPase C terminal AM341_RS04375 PF03548 Outer membrane lipoprotein carrier protein LolA AM341_RS04380 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM341_RS04380 PF01580 FtsK/SpoIIIE family AM341_RS04380 PF17854 FtsK alpha domain AM341_RS04380 PF09397 Ftsk gamma domain AM341_RS04385 PF01037 Lrp/AsnC ligand binding domain AM341_RS04395 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS04400 PF00664 ABC transporter transmembrane region AM341_RS04400 PF00005 ABC transporter AM341_RS04405 PF00005 ABC transporter AM341_RS04405 PF00664 ABC transporter transmembrane region AM341_RS04410 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM341_RS04415 PF01176 Translation initiation factor 1A / IF-1 AM341_RS04425 PF02861 Clp amino terminal domain, pathogenicity island component AM341_RS04425 PF00004 ATPase family associated with various cellular activities (AAA) AM341_RS04425 PF17871 AAA lid domain AM341_RS04425 PF10431 C-terminal, D2-small domain, of ClpB protein AM341_RS04425 PF07724 AAA domain (Cdc48 subfamily) AM341_RS04430 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM341_RS04435 PF00313 'Cold-shock' DNA-binding domain AM341_RS04440 PF12704 MacB-like periplasmic core domain AM341_RS04440 PF02687 FtsX-like permease family AM341_RS04440 PF00005 ABC transporter AM341_RS04445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS04450 PF04393 Protein of unknown function (DUF535) AM341_RS04455 PF11398 Protein of unknown function (DUF2813) AM341_RS04460 PF00230 Major intrinsic protein AM341_RS04470 PF03956 Lysine exporter LysO AM341_RS04475 PF03063 Prismane/CO dehydrogenase family AM341_RS04480 PF00175 Oxidoreductase NAD-binding domain AM341_RS04480 PF00111 2Fe-2S iron-sulfur cluster binding domain AM341_RS04480 PF00970 Oxidoreductase FAD-binding domain AM341_RS04485 PF00205 Thiamine pyrophosphate enzyme, central domain AM341_RS04485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM341_RS04485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM341_RS04490 PF01212 Beta-eliminating lyase AM341_RS04495 PF13460 NAD(P)H-binding AM341_RS04495 PF11066 Protein of unknown function (DUF2867) AM341_RS04500 PF01370 NAD dependent epimerase/dehydratase family AM341_RS04505 PF01510 N-acetylmuramoyl-L-alanine amidase AM341_RS04510 PF01906 Putative heavy-metal-binding AM341_RS04515 PF12883 Protein of unknown function (DUF3828) AM341_RS04520 PF00005 ABC transporter AM341_RS04525 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS04530 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS04535 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS04540 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS04545 PF05958 tRNA (Uracil-5-)-methyltransferase AM341_RS04550 PF10767 Protein of unknown function (DUF2593) AM341_RS04555 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS04560 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS04565 PF08402 TOBE domain AM341_RS04565 PF00005 ABC transporter AM341_RS04570 PF13416 Bacterial extracellular solute-binding protein AM341_RS04580 PF10722 Putative bacterial sensory transduction regulator AM341_RS04585 PF18030 RimK PreATP-grasp domain AM341_RS04585 PF08443 RimK-like ATP-grasp domain AM341_RS04590 PF00881 Nitroreductase family AM341_RS04595 PF07214 Protein of unknown function (DUF1418) AM341_RS04600 PF00462 Glutaredoxin AM341_RS04605 PF11045 Putative inner membrane protein of Enterobacteriaceae AM341_RS04610 PF06826 Predicted Permease Membrane Region AM341_RS04610 PF02080 TrkA-C domain AM341_RS04615 PF00440 Bacterial regulatory proteins, tetR family AM341_RS04620 PF07690 Major Facilitator Superfamily AM341_RS04635 PF07690 Major Facilitator Superfamily AM341_RS04640 PF01569 PAP2 superfamily AM341_RS04645 PF00455 DeoR C terminal sensor domain AM341_RS04645 PF08220 DeoR-like helix-turn-helix domain AM341_RS04650 PF00768 D-alanyl-D-alanine carboxypeptidase AM341_RS04650 PF07943 Penicillin-binding protein 5, C-terminal domain AM341_RS04655 PF00043 Glutathione S-transferase, C-terminal domain AM341_RS04655 PF13417 Glutathione S-transferase, N-terminal domain AM341_RS04660 PF07995 Glucose / Sorbosone dehydrogenase AM341_RS04665 PF10799 Biofilm formation protein (YliH/bssR) AM341_RS04670 PF00919 Uncharacterized protein family UPF0004 AM341_RS04670 PF18693 TRAM domain AM341_RS04670 PF04055 Radical SAM superfamily AM341_RS04675 PF17156 Gammaproteobacterial periplasmic sensor domain AM341_RS04675 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS04680 PF00563 EAL domain AM341_RS04680 PF17153 Periplasmic sensor domain, extracellular AM341_RS04685 PF12911 N-terminal TM domain of oligopeptide transport permease C AM341_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS04690 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS04695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS04700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM341_RS04700 PF00005 ABC transporter AM341_RS04705 PF01112 Asparaginase AM341_RS04710 PF03454 MoeA C-terminal region (domain IV) AM341_RS04710 PF03453 MoeA N-terminal region (domain I and II) AM341_RS04710 PF00994 Probable molybdopterin binding domain AM341_RS04715 PF00899 ThiF family AM341_RS04720 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM341_RS04725 PF04055 Radical SAM superfamily AM341_RS04730 PF02901 Pyruvate formate lyase-like AM341_RS04730 PF01228 Glycine radical AM341_RS04740 PF07350 Protein of unknown function (DUF1479) AM341_RS04745 PF12848 ABC transporter AM341_RS04745 PF00005 ABC transporter AM341_RS04750 PF17969 L,D-transpeptidase C-terminal domain AM341_RS04750 PF03734 L,D-transpeptidase catalytic domain AM341_RS04755 PF03600 Citrate transporter AM341_RS04760 PF01325 Iron dependent repressor, N-terminal DNA binding domain AM341_RS04760 PF02742 Iron dependent repressor, metal binding and dimerisation domain AM341_RS04770 PF00884 Sulfatase AM341_RS04775 PF13505 Outer membrane protein beta-barrel domain AM341_RS04780 PF00892 EamA-like transporter family AM341_RS04790 PF00210 Ferritin-like domain AM341_RS04805 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS04810 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS04815 PF00005 ABC transporter AM341_RS04820 PF00924 Mechanosensitive ion channel AM341_RS04825 PF05971 RNA methyltransferase AM341_RS04830 PF07338 Protein of unknown function (DUF1471) AM341_RS04835 PF07715 TonB-dependent Receptor Plug Domain AM341_RS04835 PF00593 TonB dependent receptor AM341_RS04840 PF13640 2OG-Fe(II) oxygenase superfamily AM341_RS04840 PF18331 PKHD-type hydroxylase C-terminal domain AM341_RS04845 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM341_RS04850 PF07338 Protein of unknown function (DUF1471) AM341_RS04855 PF02615 Malate/L-lactate dehydrogenase AM341_RS04860 PF02885 Glycosyl transferase family, helical bundle domain AM341_RS04865 PF13307 Helicase C-terminal domain AM341_RS04865 PF06733 DEAD_2 AM341_RS04865 PF00270 DEAD/DEAH box helicase AM341_RS04875 PF08719 Domain of unknown function (DUF1768) AM341_RS04880 PF00271 Helicase conserved C-terminal domain AM341_RS04880 PF00270 DEAD/DEAH box helicase AM341_RS04885 PF00440 Bacterial regulatory proteins, tetR family AM341_RS04885 PF09209 Tetracyclin repressor-like, C-terminal domain AM341_RS04890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS04895 PF00005 ABC transporter AM341_RS04910 PF11076 Putative inner membrane protein YbhQ AM341_RS04915 PF03372 Endonuclease/Exonuclease/phosphatase family AM341_RS04920 PF13091 PLD-like domain AM341_RS04925 PF03706 Lysylphosphatidylglycerol synthase TM region AM341_RS04930 PF01027 Inhibitor of apoptosis-promoting Bax1 AM341_RS04935 PF01027 Inhibitor of apoptosis-promoting Bax1 AM341_RS04940 PF02391 MoaE protein AM341_RS04945 PF02597 ThiS family AM341_RS04950 PF01967 MoaC family AM341_RS04955 PF00994 Probable molybdopterin binding domain AM341_RS04960 PF06463 Molybdenum Cofactor Synthesis C AM341_RS04960 PF04055 Radical SAM superfamily AM341_RS04965 PF01933 Uncharacterised protein family UPF0052 AM341_RS04970 PF02151 UvrB/uvrC motif AM341_RS04970 PF12344 Ultra-violet resistance protein B AM341_RS04970 PF00271 Helicase conserved C-terminal domain AM341_RS04970 PF04851 Type III restriction enzyme, res subunit AM341_RS04970 PF17757 UvrB interaction domain AM341_RS04980 PF08241 Methyltransferase domain AM341_RS04985 PF00155 Aminotransferase class I and II AM341_RS04990 PF04055 Radical SAM superfamily AM341_RS04990 PF06968 Biotin and Thiamin Synthesis associated domain AM341_RS04995 PF00202 Aminotransferase class-III AM341_RS05000 PF01161 Phosphatidylethanolamine-binding protein AM341_RS05010 PF01095 Pectinesterase AM341_RS05015 PF00330 Aconitase family (aconitate hydratase) AM341_RS05015 PF00694 Aconitase C-terminal domain AM341_RS05020 PF00939 Sodium:sulfate symporter transmembrane region AM341_RS05025 PF04303 PrpF protein AM341_RS05030 PF03466 LysR substrate binding domain AM341_RS05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS05035 PF10282 Lactonase, 7-bladed beta-propeller AM341_RS05045 PF00005 ABC transporter AM341_RS05045 PF03459 TOBE domain AM341_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS05065 PF10766 Multidrug efflux pump-associated protein AcrZ AM341_RS05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS05070 PF03459 TOBE domain AM341_RS05075 PF00005 ABC transporter AM341_RS05080 PF16363 GDP-mannose 4,6 dehydratase AM341_RS05085 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM341_RS05085 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM341_RS05090 PF00288 GHMP kinases N terminal domain AM341_RS05090 PF08544 GHMP kinases C terminal AM341_RS05090 PF10509 Galactokinase galactose-binding signature AM341_RS05095 PF01263 Aldose 1-epimerase AM341_RS05100 PF00300 Histidine phosphatase superfamily (branch 1) AM341_RS05105 PF00793 DAHP synthetase I family AM341_RS05115 PF13985 YbgS-like protein AM341_RS05120 PF01545 Cation efflux family AM341_RS05125 PF04973 Nicotinamide mononucleotide transporter AM341_RS05130 PF02445 Quinolinate synthetase A protein AM341_RS05175 PF16331 TolA binding protein trimerisation AM341_RS05175 PF13174 Tetratricopeptide repeat AM341_RS05180 PF00691 OmpA family AM341_RS05185 PF07676 WD40-like Beta Propeller Repeat AM341_RS05185 PF04052 TolB amino-terminal domain AM341_RS05190 PF06519 TolA C-terminal AM341_RS05195 PF02472 Biopolymer transport protein ExbD/TolR AM341_RS05200 PF01618 MotA/TolQ/ExbB proton channel family AM341_RS05205 PF03061 Thioesterase superfamily AM341_RS05210 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AM341_RS05215 PF08173 Membrane bound YbgT-like protein AM341_RS05220 PF02322 Cytochrome bd terminal oxidase subunit II AM341_RS05225 PF01654 Cytochrome bd terminal oxidase subunit I AM341_RS05235 PF09261 Alpha mannosidase middle domain AM341_RS05235 PF01074 Glycosyl hydrolases family 38 N-terminal domain AM341_RS05235 PF07748 Glycosyl hydrolases family 38 C-terminal domain AM341_RS05240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS05240 PF02378 Phosphotransferase system, EIIC AM341_RS05240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS05245 PF07702 UTRA domain AM341_RS05245 PF00392 Bacterial regulatory proteins, gntR family AM341_RS05250 PF00549 CoA-ligase AM341_RS05250 PF02629 CoA binding domain AM341_RS05255 PF00549 CoA-ligase AM341_RS05255 PF08442 ATP-grasp domain AM341_RS05260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM341_RS05260 PF00364 Biotin-requiring enzyme AM341_RS05260 PF02817 e3 binding domain AM341_RS05265 PF00676 Dehydrogenase E1 component AM341_RS05265 PF16870 2-oxoglutarate dehydrogenase C-terminal AM341_RS05265 PF16078 2-oxoglutarate dehydrogenase N-terminus AM341_RS05265 PF02779 Transketolase, pyrimidine binding domain AM341_RS05270 PF13085 2Fe-2S iron-sulfur cluster binding domain AM341_RS05275 PF02910 Fumarate reductase flavoprotein C-term AM341_RS05275 PF00890 FAD binding domain AM341_RS05280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM341_RS05285 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM341_RS05300 PF00285 Citrate synthase, C-terminal domain AM341_RS05305 PF00419 Fimbrial protein AM341_RS05310 PF13954 PapC N-terminal domain AM341_RS05310 PF00577 Outer membrane usher protein AM341_RS05310 PF13953 PapC C-terminal domain AM341_RS05315 PF02753 Pili assembly chaperone PapD, C-terminal domain AM341_RS05315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS05320 PF00419 Fimbrial protein AM341_RS05325 PF05145 Transition state regulatory protein AbrB AM341_RS05330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM341_RS05330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM341_RS05330 PF06827 Zinc finger found in FPG and IleRS AM341_RS05335 PF03746 LamB/YcsF family AM341_RS05340 PF02626 Carboxyltransferase domain, subdomain A and B AM341_RS05345 PF02682 Carboxyltransferase domain, subdomain C and D AM341_RS05350 PF01784 NIF3 (NGG1p interacting factor 3) AM341_RS05355 PF00854 POT family AM341_RS05360 PF00875 DNA photolyase AM341_RS05360 PF03441 FAD binding domain of DNA photolyase AM341_RS05365 PF08349 Protein of unknown function (DUF1722) AM341_RS05400 PF05593 RHS Repeat AM341_RS05400 PF03527 RHS protein AM341_RS05405 PF10725 Protein of unknown function (DUF2517) AM341_RS05410 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) AM341_RS05415 PF03814 Potassium-transporting ATPase A subunit AM341_RS05425 PF02669 K+-transporting ATPase, c chain AM341_RS05430 PF02702 Osmosensitive K+ channel His kinase sensor domain AM341_RS05430 PF13492 GAF domain AM341_RS05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS05430 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS05430 PF13493 Domain of unknown function (DUF4118) AM341_RS05435 PF00486 Transcriptional regulatory protein, C terminal AM341_RS05435 PF00072 Response regulator receiver domain AM341_RS05450 PF13520 Amino acid permease AM341_RS05460 PF10946 Protein of unknown function DUF2625 AM341_RS05470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM341_RS05470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM341_RS05470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM341_RS05470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM341_RS05475 PF03925 SeqA protein C-terminal domain AM341_RS05475 PF17206 SeqA protein N-terminal domain AM341_RS05480 PF12697 Alpha/beta hydrolase family AM341_RS05485 PF01402 Ribbon-helix-helix protein, copG family AM341_RS05490 PF00258 Flavodoxin AM341_RS05500 PF01475 Ferric uptake regulator family AM341_RS05505 PF13982 YbfN-like lipoprotein AM341_RS05510 PF03573 outer membrane porin, OprD family AM341_RS05515 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM341_RS05515 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM341_RS05520 PF02378 Phosphotransferase system, EIIC AM341_RS05520 PF00367 phosphotransferase system, EIIB AM341_RS05520 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM341_RS05525 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM341_RS05530 PF01979 Amidohydrolase family AM341_RS05535 PF00480 ROK family AM341_RS05535 PF01047 MarR family AM341_RS05540 PF13344 Haloacid dehalogenase-like hydrolase AM341_RS05550 PF00733 Asparagine synthase AM341_RS05550 PF13537 Glutamine amidotransferase domain AM341_RS05595 PF01494 FAD binding domain AM341_RS05600 PF00919 Uncharacterized protein family UPF0004 AM341_RS05600 PF01938 TRAM domain AM341_RS05600 PF04055 Radical SAM superfamily AM341_RS05605 PF02562 PhoH-like protein AM341_RS05610 PF02130 Uncharacterized protein family UPF0054 AM341_RS05615 PF00571 CBS domain AM341_RS05615 PF03471 Transporter associated domain AM341_RS05620 PF00795 Carbon-nitrogen hydrolase AM341_RS05625 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS05630 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS05635 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS05640 PF00005 ABC transporter AM341_RS05645 PF01156 Inosine-uridine preferring nucleoside hydrolase AM341_RS05650 PF00012 Hsp70 protein AM341_RS05660 PF06889 Protein of unknown function (DUF1266) AM341_RS05665 PF08238 Sel1 repeat AM341_RS05675 PF06889 Protein of unknown function (DUF1266) AM341_RS05680 PF08238 Sel1 repeat AM341_RS05685 PF07295 Zinc-ribbon containing domain AM341_RS05690 PF08264 Anticodon-binding domain of tRNA AM341_RS05690 PF00133 tRNA synthetases class I (I, L, M and V) AM341_RS05690 PF13603 Leucyl-tRNA synthetase, Domain 2 AM341_RS05695 PF04390 Lipopolysaccharide-assembly AM341_RS05700 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AM341_RS05700 PF06144 DNA polymerase III, delta subunit AM341_RS05705 PF01467 Cytidylyltransferase-like AM341_RS05710 PF00300 Histidine phosphatase superfamily (branch 1) AM341_RS05720 PF02590 Predicted SPOUT methyltransferase AM341_RS05725 PF00905 Penicillin binding protein transpeptidase domain AM341_RS05725 PF03717 Penicillin-binding Protein dimerisation domain AM341_RS05730 PF01098 Cell cycle protein AM341_RS05735 PF05036 Sporulation related domain AM341_RS05735 PF03330 Lytic transglycolase AM341_RS05740 PF00768 D-alanyl-D-alanine carboxypeptidase AM341_RS05740 PF07943 Penicillin-binding protein 5, C-terminal domain AM341_RS05745 PF04359 Protein of unknown function (DUF493) AM341_RS05750 PF03099 Biotin/lipoate A/B protein ligase family AM341_RS05760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS05760 PF03466 LysR substrate binding domain AM341_RS05770 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM341_RS05770 PF04055 Radical SAM superfamily AM341_RS05775 PF02416 mttA/Hcf106 family AM341_RS05785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM341_RS05790 PF00313 'Cold-shock' DNA-binding domain AM341_RS05795 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AM341_RS05805 PF03606 C4-dicarboxylate anaerobic carrier AM341_RS05810 PF00072 Response regulator receiver domain AM341_RS05810 PF12431 Transcriptional regulator AM341_RS05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS05815 PF00989 PAS fold AM341_RS05815 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM341_RS05815 PF17203 Single cache domain 3 AM341_RS05820 PF08218 Citrate lyase ligase C-terminal domain AM341_RS05825 PF06857 Malonate decarboxylase delta subunit (MdcD) AM341_RS05830 PF03328 HpcH/HpaI aldolase/citrate lyase family AM341_RS05835 PF04223 Citrate lyase, alpha subunit (CitF) AM341_RS05840 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AM341_RS05845 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM341_RS05850 PF00939 Sodium:sulfate symporter transmembrane region AM341_RS05855 PF00445 Ribonuclease T2 family AM341_RS05865 PF14760 Rnk N-terminus AM341_RS05865 PF01272 Transcription elongation factor, GreA/GreB, C-term AM341_RS05875 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS05875 PF13823 Alcohol dehydrogenase GroES-associated AM341_RS05875 PF00107 Zinc-binding dehydrogenase AM341_RS05895 PF00582 Universal stress protein family AM341_RS05900 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS05900 PF13192 Thioredoxin domain AM341_RS05905 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM341_RS05905 PF00578 AhpC/TSA family AM341_RS05910 PF13098 Thioredoxin-like domain AM341_RS05920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS05920 PF03466 LysR substrate binding domain AM341_RS05925 PF01507 Phosphoadenosine phosphosulfate reductase family AM341_RS05925 PF11922 Domain of unknown function (DUF3440) AM341_RS05930 PF02195 ParB-like nuclease domain AM341_RS05935 PF00155 Aminotransferase class I and II AM341_RS05940 PF00465 Iron-containing alcohol dehydrogenase AM341_RS05945 PF04328 Selenoprotein, putative AM341_RS05950 PF13722 5TM C-terminal transporter carbon starvation CstA AM341_RS05950 PF02554 Carbon starvation protein CstA AM341_RS05955 PF03061 Thioesterase superfamily AM341_RS05965 PF00550 Phosphopantetheine attachment site AM341_RS05965 PF00857 Isochorismatase family AM341_RS05970 PF13193 AMP-binding enzyme C-terminal domain AM341_RS05970 PF00501 AMP-binding enzyme AM341_RS05975 PF00425 chorismate binding enzyme AM341_RS05985 PF01497 Periplasmic binding protein AM341_RS05990 PF05977 Transmembrane secretion effector AM341_RS05995 PF01032 FecCD transport family AM341_RS06000 PF01032 FecCD transport family AM341_RS06005 PF00005 ABC transporter AM341_RS06010 PF02706 Chain length determinant protein AM341_RS06015 PF00975 Thioesterase domain AM341_RS06015 PF00550 Phosphopantetheine attachment site AM341_RS06015 PF00668 Condensation domain AM341_RS06015 PF13193 AMP-binding enzyme C-terminal domain AM341_RS06015 PF00501 AMP-binding enzyme AM341_RS06020 PF03621 MbtH-like protein AM341_RS06025 PF00756 Putative esterase AM341_RS06025 PF11806 Domain of unknown function (DUF3327) AM341_RS06030 PF00593 TonB dependent receptor AM341_RS06030 PF07715 TonB-dependent Receptor Plug Domain AM341_RS06035 PF01648 4'-phosphopantetheinyl transferase superfamily AM341_RS06035 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AM341_RS06045 PF01609 Transposase DDE domain AM341_RS06050 PF01848 Hok/gef family AM341_RS06065 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM341_RS06070 PF13610 DDE domain AM341_RS06090 PF13693 Winged helix-turn-helix DNA-binding AM341_RS06100 PF13737 Transposase DDE domain AM341_RS06110 PF00534 Glycosyl transferases group 1 AM341_RS06115 PF08003 Protein of unknown function (DUF1698) AM341_RS06120 PF00534 Glycosyl transferases group 1 AM341_RS06120 PF13477 Glycosyl transferase 4-like AM341_RS06125 PF00534 Glycosyl transferases group 1 AM341_RS06130 PF00005 ABC transporter AM341_RS06135 PF01061 ABC-2 type transporter AM341_RS06145 PF16363 GDP-mannose 4,6 dehydratase AM341_RS06150 PF00483 Nucleotidyl transferase AM341_RS06170 PF13610 DDE domain AM341_RS06175 PF00881 Nitroreductase family AM341_RS06180 PF00924 Mechanosensitive ion channel AM341_RS06185 PF00324 Amino acid permease AM341_RS06190 PF00873 AcrB/AcrD/AcrF family AM341_RS06195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS06195 PF00529 HlyD membrane-fusion protein of T1SS AM341_RS06200 PF11604 Copper binding periplasmic protein CusF AM341_RS06205 PF02321 Outer membrane efflux protein AM341_RS06215 PF00072 Response regulator receiver domain AM341_RS06215 PF00486 Transcriptional regulatory protein, C terminal AM341_RS06220 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS06220 PF00672 HAMP domain AM341_RS06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS06225 PF13632 Glycosyl transferase family group 2 AM341_RS06225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM341_RS06230 PF13283 Bacteriophage N adsorption protein A C-term AM341_RS06235 PF14488 Domain of unknown function (DUF4434) AM341_RS06245 PF12833 Helix-turn-helix domain AM341_RS06260 PF00072 Response regulator receiver domain AM341_RS06260 PF00196 Bacterial regulatory proteins, luxR family AM341_RS06265 PF00419 Fimbrial protein AM341_RS06270 PF00419 Fimbrial protein AM341_RS06275 PF00577 Outer membrane usher protein AM341_RS06275 PF13954 PapC N-terminal domain AM341_RS06275 PF13953 PapC C-terminal domain AM341_RS06280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS06280 PF02753 Pili assembly chaperone PapD, C-terminal domain AM341_RS06285 PF00419 Fimbrial protein AM341_RS06290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM341_RS06290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM341_RS06300 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM341_RS06305 PF01406 tRNA synthetases class I (C) catalytic domain AM341_RS06305 PF09190 DALR domain AM341_RS06310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM341_RS06315 PF12850 Calcineurin-like phosphoesterase superfamily domain AM341_RS06325 PF00731 AIR carboxylase AM341_RS06330 PF02222 ATP-grasp domain AM341_RS06330 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM341_RS06335 PF00696 Amino acid kinase family AM341_RS06340 PF11392 Protein of unknown function (DUF2877) AM341_RS06345 PF06545 Protein of unknown function (DUF1116) AM341_RS06350 PF00549 CoA-ligase AM341_RS06350 PF02629 CoA binding domain AM341_RS06355 PF02615 Malate/L-lactate dehydrogenase AM341_RS06360 PF01546 Peptidase family M20/M25/M40 AM341_RS06365 PF07883 Cupin domain AM341_RS06365 PF05899 Protein of unknown function (DUF861) AM341_RS06370 PF02595 Glycerate kinase family AM341_RS06375 PF00860 Permease family AM341_RS06380 PF01979 Amidohydrolase family AM341_RS06385 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM341_RS06390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM341_RS06390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM341_RS06395 PF01261 Xylose isomerase-like TIM barrel AM341_RS06400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM341_RS06400 PF00205 Thiamine pyrophosphate enzyme, central domain AM341_RS06400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM341_RS06405 PF01614 Bacterial transcriptional regulator AM341_RS06405 PF09339 IclR helix-turn-helix domain AM341_RS06410 PF04115 Ureidoglycolate lyase AM341_RS06415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS06415 PF03466 LysR substrate binding domain AM341_RS06440 PF15631 NTF2 fold immunity protein AM341_RS06455 PF00005 ABC transporter AM341_RS06460 PF13472 GDSL-like Lipase/Acylhydrolase family AM341_RS06465 PF00106 short chain dehydrogenase AM341_RS06470 PF00085 Thioredoxin AM341_RS06475 PF03649 Uncharacterised protein family (UPF0014) AM341_RS06480 PF00005 ABC transporter AM341_RS06485 PF01145 SPFH domain / Band 7 family AM341_RS06485 PF16200 C-terminal region of band_7 AM341_RS06490 PF01957 NfeD-like C-terminal, partner-binding AM341_RS06495 PF13411 MerR HTH family regulatory protein AM341_RS06500 PF13520 Amino acid permease AM341_RS06505 PF04960 Glutaminase AM341_RS06510 PF00403 Heavy-metal-associated domain AM341_RS06515 PF01381 Helix-turn-helix AM341_RS06525 PF01963 TraB family AM341_RS06535 PF04073 Aminoacyl-tRNA editing domain AM341_RS06540 PF00149 Calcineurin-like phosphoesterase AM341_RS06540 PF02872 5'-nucleotidase, C-terminal domain AM341_RS06550 PF07690 Major Facilitator Superfamily AM341_RS06555 PF00999 Sodium/hydrogen exchanger family AM341_RS06555 PF02254 TrkA-N domain AM341_RS06560 PF00294 pfkB family carbohydrate kinase AM341_RS06565 PF07859 alpha/beta hydrolase fold AM341_RS06570 PF00762 Ferrochelatase AM341_RS06575 PF05191 Adenylate kinase, active site lid AM341_RS06585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS06585 PF00183 Hsp90 protein AM341_RS06590 PF02132 RecR protein AM341_RS06590 PF13662 Toprim domain AM341_RS06595 PF02575 YbaB/EbfC DNA-binding family AM341_RS06600 PF12169 DNA polymerase III subunits gamma and tau domain III AM341_RS06600 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM341_RS06600 PF12170 DNA polymerase III tau subunit V interacting with alpha AM341_RS06605 PF00156 Phosphoribosyl transferase domain AM341_RS06615 PF04304 Protein of unknown function (DUF454) AM341_RS06620 PF07445 Primosomal replication protein priC AM341_RS06625 PF10689 Protein of unknown function (DUF2496) AM341_RS06630 PF00924 Mechanosensitive ion channel AM341_RS06630 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM341_RS06630 PF12795 Mechanosensitive ion channel porin domain AM341_RS06640 PF08361 MAATS-type transcriptional repressor, C-terminal region AM341_RS06640 PF00440 Bacterial regulatory proteins, tetR family AM341_RS06645 PF00529 HlyD membrane-fusion protein of T1SS AM341_RS06645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS06650 PF00873 AcrB/AcrD/AcrF family AM341_RS06655 PF10757 Biofilm formation regulator YbaJ AM341_RS06660 PF05321 Haemolysin expression modulating protein AM341_RS06665 PF14602 Hexapeptide repeat of succinyl-transferase AM341_RS06665 PF12464 Maltose acetyltransferase AM341_RS06670 PF10777 Inner membrane protein YlaC AM341_RS06675 PF00563 EAL domain AM341_RS06675 PF12792 CSS motif domain associated with EAL AM341_RS06680 PF07237 Protein of unknown function (DUF1428) AM341_RS06690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM341_RS06695 PF09619 Type III secretion system lipoprotein chaperone (YscW) AM341_RS06705 PF00909 Ammonium Transporter Family AM341_RS06710 PF00543 Nitrogen regulatory protein P-II AM341_RS06715 PF00005 ABC transporter AM341_RS06715 PF00664 ABC transporter transmembrane region AM341_RS06720 PF00005 ABC transporter AM341_RS06720 PF00664 ABC transporter transmembrane region AM341_RS06725 PF13404 AsnC-type helix-turn-helix domain AM341_RS06725 PF01037 Lrp/AsnC ligand binding domain AM341_RS06735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS06735 PF12793 Sugar transport-related sRNA regulator N-term AM341_RS06740 PF06508 Queuosine biosynthesis protein QueC AM341_RS06755 PF13145 PPIC-type PPIASE domain AM341_RS06760 PF00216 Bacterial DNA-binding protein AM341_RS06765 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM341_RS06765 PF05362 Lon protease (S16) C-terminal proteolytic domain AM341_RS06765 PF00004 ATPase family associated with various cellular activities (AAA) AM341_RS06770 PF07724 AAA domain (Cdc48 subfamily) AM341_RS06770 PF06689 ClpX C4-type zinc finger AM341_RS06770 PF10431 C-terminal, D2-small domain, of ClpB protein AM341_RS06775 PF00574 Clp protease AM341_RS06780 PF05697 Bacterial trigger factor protein (TF) AM341_RS06780 PF05698 Bacterial trigger factor protein (TF) C-terminus AM341_RS06780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM341_RS06790 PF01722 BolA-like protein AM341_RS06800 PF03923 Uncharacterized lipoprotein AM341_RS06800 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM341_RS06805 PF07690 Major Facilitator Superfamily AM341_RS06810 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM341_RS06810 PF06481 COX Aromatic Rich Motif AM341_RS06815 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM341_RS06820 PF00510 Cytochrome c oxidase subunit III AM341_RS06825 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM341_RS06830 PF01040 UbiA prenyltransferase family AM341_RS06835 PF07690 Major Facilitator Superfamily AM341_RS06840 PF04461 Protein of unknown function (DUF520) AM341_RS06845 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM341_RS06845 PF02558 Ketopantoate reductase PanE/ApbA AM341_RS06850 PF01965 DJ-1/PfpI family AM341_RS06855 PF02926 THUMP domain AM341_RS06855 PF02568 Thiamine biosynthesis protein (ThiI) AM341_RS06860 PF02609 Exonuclease VII small subunit AM341_RS06865 PF00348 Polyprenyl synthetase AM341_RS06870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM341_RS06870 PF02780 Transketolase, C-terminal domain AM341_RS06870 PF02779 Transketolase, pyrimidine binding domain AM341_RS06875 PF00248 Aldo/keto reductase family AM341_RS06880 PF04608 Phosphatidylglycerophosphatase A AM341_RS06885 PF00586 AIR synthase related protein, N-terminal domain AM341_RS06885 PF02769 AIR synthase related protein, C-terminal domain AM341_RS06890 PF01029 NusB family AM341_RS06895 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM341_RS06900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM341_RS06900 PF01872 RibD C-terminal domain AM341_RS06905 PF03477 ATP cone domain AM341_RS06910 PF11622 Protein of unknown function (DUF3251) AM341_RS06920 PF03502 Nucleoside-specific channel-forming protein, Tsx AM341_RS06925 PF01844 HNH endonuclease AM341_RS06930 PF02355 Protein export membrane protein AM341_RS06930 PF07549 SecD/SecF GG Motif AM341_RS06935 PF13721 SecD export protein N-terminal TM region AM341_RS06935 PF07549 SecD/SecF GG Motif AM341_RS06935 PF02355 Protein export membrane protein AM341_RS06940 PF02699 Preprotein translocase subunit AM341_RS06945 PF01702 Queuine tRNA-ribosyltransferase AM341_RS06950 PF02547 Queuosine biosynthesis protein AM341_RS06955 PF04336 Acyl carrier protein phosphodiesterase AM341_RS06960 PF00128 Alpha amylase, catalytic domain AM341_RS06960 PF02903 Alpha amylase, N-terminal ig-like domain AM341_RS06965 PF00324 Amino acid permease AM341_RS06970 PF05525 Branched-chain amino acid transport protein AM341_RS06975 PF00989 PAS fold AM341_RS06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS06975 PF11808 Phosphate regulon sensor protein PhoR AM341_RS06975 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS06980 PF00486 Transcriptional regulatory protein, C terminal AM341_RS06980 PF00072 Response regulator receiver domain AM341_RS06985 PF00149 Calcineurin-like phosphoesterase AM341_RS06985 PF12320 Type 5 capsule protein repressor C-terminal domain AM341_RS06990 PF13476 AAA domain AM341_RS06995 PF07690 Major Facilitator Superfamily AM341_RS07000 PF00480 ROK family AM341_RS07005 PF04381 Putative exonuclease, RdgC AM341_RS07010 PF10971 Protein of unknown function (DUF2773) AM341_RS07020 PF06865 Pyrimidine/purine nucleoside phosphorylase AM341_RS07025 PF07302 AroM protein AM341_RS07035 PF16362 YaiA protein AM341_RS07040 PF01202 Shikimate kinase AM341_RS07045 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM341_RS07050 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM341_RS07050 PF03807 NADP oxidoreductase coenzyme F420-dependent AM341_RS07055 PF05230 MASE2 domain AM341_RS07055 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS07060 PF07769 psiF repeat AM341_RS07065 PF00245 Alkaline phosphatase AM341_RS07070 PF10796 Sigma-S stabilisation anti-adaptor protein AM341_RS07080 PF07478 D-ala D-ala ligase C-terminus AM341_RS07080 PF01820 D-ala D-ala ligase N-terminus AM341_RS07085 PF10953 Protein of unknown function (DUF2754) AM341_RS07090 PF10954 Protein of unknown function (DUF2755) AM341_RS07095 PF07759 Protein of unknown function (DUF1615) AM341_RS07100 PF05992 SbmA/BacA-like family AM341_RS07110 PF00144 Beta-lactamase AM341_RS07115 PF15977 Winged helix-turn-helix DNA binding AM341_RS07120 PF03797 Autotransporter beta-domain AM341_RS07120 PF03212 Pertactin AM341_RS07130 PF00490 Delta-aminolevulinic acid dehydratase AM341_RS07135 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM341_RS07140 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS07145 PF00005 ABC transporter AM341_RS07150 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM341_RS07170 PF02585 GlcNAc-PI de-N-acetylase AM341_RS07175 PF00535 Glycosyl transferase family 2 AM341_RS07180 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS07190 PF02583 Metal-sensitive transcriptional repressor AM341_RS07195 PF00107 Zinc-binding dehydrogenase AM341_RS07195 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS07200 PF00756 Putative esterase AM341_RS07205 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM341_RS07210 PF07690 Major Facilitator Superfamily AM341_RS07215 PF07836 DmpG-like communication domain AM341_RS07215 PF00682 HMGL-like AM341_RS07220 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AM341_RS07220 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM341_RS07225 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM341_RS07230 PF12697 Alpha/beta hydrolase family AM341_RS07235 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM341_RS07240 PF01494 FAD binding domain AM341_RS07245 PF01614 Bacterial transcriptional regulator AM341_RS07245 PF09339 IclR helix-turn-helix domain AM341_RS07250 PF00356 Bacterial regulatory proteins, lacI family AM341_RS07260 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM341_RS07260 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM341_RS07260 PF00703 Glycosyl hydrolases family 2 AM341_RS07260 PF16353 Domain of unknown function(DUF4981) AM341_RS07260 PF02929 Beta galactosidase small chain AM341_RS07265 PF01306 LacY proton/sugar symporter AM341_RS07270 PF12464 Maltose acetyltransferase AM341_RS07270 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS07275 PF07690 Major Facilitator Superfamily AM341_RS07280 PF02560 Cyanate lyase C-terminal domain AM341_RS07285 PF00484 Carbonic anhydrase AM341_RS07290 PF03466 LysR substrate binding domain AM341_RS07290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS07295 PF07969 Amidohydrolase family AM341_RS07300 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM341_RS07305 PF16177 Acetyl-coenzyme A synthetase N-terminus AM341_RS07305 PF00501 AMP-binding enzyme AM341_RS07305 PF13193 AMP-binding enzyme C-terminal domain AM341_RS07310 PF03972 MmgE/PrpD family AM341_RS07315 PF00285 Citrate synthase, C-terminal domain AM341_RS07325 PF00158 Sigma-54 interaction domain AM341_RS07325 PF06506 Propionate catabolism activator AM341_RS07325 PF02954 Bacterial regulatory protein, Fis family AM341_RS07330 PF07338 Protein of unknown function (DUF1471) AM341_RS07335 PF01810 LysE type translocator AM341_RS07350 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS07350 PF00107 Zinc-binding dehydrogenase AM341_RS07355 PF07969 Amidohydrolase family AM341_RS07360 PF00696 Amino acid kinase family AM341_RS07370 PF06545 Protein of unknown function (DUF1116) AM341_RS07375 PF00549 CoA-ligase AM341_RS07375 PF02629 CoA binding domain AM341_RS07380 PF11392 Protein of unknown function (DUF2877) AM341_RS07385 PF12796 Ankyrin repeats (3 copies) AM341_RS07395 PF06496 Protein of unknown function (DUF1097) AM341_RS07400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS07400 PF03466 LysR substrate binding domain AM341_RS07405 PF00196 Bacterial regulatory proteins, luxR family AM341_RS07405 PF00563 EAL domain AM341_RS07420 PF02028 BCCT, betaine/carnitine/choline family transporter AM341_RS07430 PF00440 Bacterial regulatory proteins, tetR family AM341_RS07430 PF13977 BetI-type transcriptional repressor, C-terminal AM341_RS07435 PF00171 Aldehyde dehydrogenase family AM341_RS07440 PF05199 GMC oxidoreductase AM341_RS07440 PF00732 GMC oxidoreductase AM341_RS07460 PF02589 LUD domain AM341_RS07465 PF02589 LUD domain AM341_RS07465 PF13183 4Fe-4S dicluster domain AM341_RS07465 PF11870 Domain of unknown function (DUF3390) AM341_RS07470 PF02754 Cysteine-rich domain AM341_RS07475 PF12852 Cupin AM341_RS07475 PF12833 Helix-turn-helix domain AM341_RS07480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS07480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM341_RS07485 PF07338 Protein of unknown function (DUF1471) AM341_RS07490 PF04224 Protein of unknown function, DUF417 AM341_RS07495 PF12833 Helix-turn-helix domain AM341_RS07505 PF13737 Transposase DDE domain AM341_RS07510 PF11924 Inverse autotransporter, beta-domain AM341_RS07530 PF01197 Ribosomal protein L31 AM341_RS07535 PF00444 Ribosomal protein L36 AM341_RS07550 PF00196 Bacterial regulatory proteins, luxR family AM341_RS07555 PF16449 Fimbrillin MatB AM341_RS07560 PF18649 EcpB C-terminal domain AM341_RS07565 PF15976 CS1-pili formation C-terminal AM341_RS07565 PF16967 E-set like domain AM341_RS07580 PF03692 Putative zinc- or iron-chelating domain AM341_RS07590 PF07274 Protein of unknown function (DUF1440) AM341_RS07600 PF01799 [2Fe-2S] binding domain AM341_RS07600 PF00111 2Fe-2S iron-sulfur cluster binding domain AM341_RS07605 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM341_RS07605 PF00941 FAD binding domain in molybdopterin dehydrogenase AM341_RS07610 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM341_RS07610 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM341_RS07615 PF13478 XdhC Rossmann domain AM341_RS07615 PF02625 XdhC and CoxI family AM341_RS07620 PF03466 LysR substrate binding domain AM341_RS07625 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM341_RS07630 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM341_RS07640 PF06174 Protein of unknown function (DUF987) AM341_RS07645 PF04002 RadC-like JAB domain AM341_RS07650 PF03230 Antirestriction protein AM341_RS07660 PF06067 Domain of unknown function (DUF932) AM341_RS07770 PF05321 Haemolysin expression modulating protein AM341_RS07785 PF05717 IS66 Orf2 like protein AM341_RS07790 PF03050 Transposase IS66 family AM341_RS07790 PF13005 zinc-finger binding domain of transposase IS66 AM341_RS07790 PF13007 Transposase C of IS166 homeodomain AM341_RS07790 PF13817 IS66 C-terminal element AM341_RS07815 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM341_RS07840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS07840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS07845 PF04198 Putative sugar-binding domain AM341_RS07850 PF00005 ABC transporter AM341_RS07855 PF02653 Branched-chain amino acid transport system / permease component AM341_RS07860 PF02653 Branched-chain amino acid transport system / permease component AM341_RS07865 PF13407 Periplasmic binding protein domain AM341_RS07870 PF01791 DeoC/LacD family aldolase AM341_RS07875 PF03992 Antibiotic biosynthesis monooxygenase AM341_RS07880 PF00834 Ribulose-phosphate 3 epimerase family AM341_RS07890 PF09857 Putative toxin of bacterial toxin-antitoxin pair AM341_RS07935 PF13356 Arm DNA-binding domain AM341_RS07935 PF14659 Phage integrase, N-terminal SAM-like domain AM341_RS07935 PF00589 Phage integrase family AM341_RS07945 PF00171 Aldehyde dehydrogenase family AM341_RS07950 PF00696 Amino acid kinase family AM341_RS07950 PF01472 PUA domain AM341_RS07955 PF00267 Gram-negative porin AM341_RS07960 PF07417 Sigma factor-binding transcriptional regulator Crl AM341_RS07965 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AM341_RS07970 PF00156 Phosphoribosyl transferase domain AM341_RS07975 PF07687 Peptidase dimerisation domain AM341_RS07975 PF01546 Peptidase family M20/M25/M40 AM341_RS07980 PF00472 RF-1 domain AM341_RS07995 PF13673 Acetyltransferase (GNAT) domain AM341_RS08000 PF13957 Toxin YafO, type II toxin-antitoxin system AM341_RS08010 PF00817 impB/mucB/samB family AM341_RS08010 PF11799 impB/mucB/samB family C-terminal domain AM341_RS08010 PF11798 IMS family HHH motif AM341_RS08015 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM341_RS08015 PF00691 OmpA family AM341_RS08020 PF00771 FHIPEP family AM341_RS08030 PF00877 NlpC/P60 family AM341_RS08035 PF04221 RelB antitoxin AM341_RS08040 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ AM341_RS08045 PF03734 L,D-transpeptidase catalytic domain AM341_RS08050 PF13230 Glutamine amidotransferases class-II AM341_RS08055 PF13580 SIS domain AM341_RS08060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM341_RS08060 PF09317 Domain of unknown function (DUF1974) AM341_RS08060 PF02770 Acyl-CoA dehydrogenase, middle domain AM341_RS08060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM341_RS08070 PF00795 Carbon-nitrogen hydrolase AM341_RS08075 PF01609 Transposase DDE domain AM341_RS08075 PF13808 DDE_Tnp_1-associated AM341_RS08085 PF03527 RHS protein AM341_RS08085 PF14220 Domain of unknown function (DUF4329) AM341_RS08085 PF05593 RHS Repeat AM341_RS08090 PF04717 Type VI secretion system, phage-baseplate injector AM341_RS08100 PF05638 Type VI secretion system effector, Hcp AM341_RS08115 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM341_RS08125 PF05947 Type VI secretion system, TssF AM341_RS08145 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AM341_RS08155 PF17871 AAA lid domain AM341_RS08155 PF10431 C-terminal, D2-small domain, of ClpB protein AM341_RS08155 PF00004 ATPase family associated with various cellular activities (AAA) AM341_RS08155 PF07724 AAA domain (Cdc48 subfamily) AM341_RS08170 PF14331 ImcF-related N-terminal domain AM341_RS08170 PF06744 Type VI secretion protein IcmF C-terminal AM341_RS08170 PF06761 Intracellular multiplication and human macrophage-killing AM341_RS08180 PF05638 Type VI secretion system effector, Hcp AM341_RS08210 PF00929 Exonuclease AM341_RS08215 PF00075 RNase H AM341_RS08220 PF08241 Methyltransferase domain AM341_RS08225 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM341_RS08225 PF00753 Metallo-beta-lactamase superfamily AM341_RS08230 PF01464 Transglycosylase SLT domain AM341_RS08230 PF01476 LysM domain AM341_RS08235 PF08241 Methyltransferase domain AM341_RS08240 PF03372 Endonuclease/Exonuclease/phosphatase family AM341_RS08245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS08245 PF03466 LysR substrate binding domain AM341_RS08250 PF00248 Aldo/keto reductase family AM341_RS08290 PF09383 NIL domain AM341_RS08290 PF00005 ABC transporter AM341_RS08295 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS08300 PF03180 NLPA lipoprotein AM341_RS08305 PF16358 RcsF lipoprotein AM341_RS08310 PF18389 TrmO C-terminal domain AM341_RS08310 PF01980 tRNA-methyltransferase O AM341_RS08315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM341_RS08315 PF03129 Anticodon binding domain AM341_RS08315 PF04073 Aminoacyl-tRNA editing domain AM341_RS08320 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM341_RS08325 PF17185 NlpE C-terminal OB domain AM341_RS08325 PF04170 NlpE N-terminal domain AM341_RS08330 PF00472 RF-1 domain AM341_RS08335 PF07152 YaeQ protein AM341_RS08340 PF06786 Uncharacterised protein family (UPF0253) AM341_RS08345 PF07073 Modulator of Rho-dependent transcription termination (ROF) AM341_RS08350 PF01171 PP-loop family AM341_RS08350 PF11734 TilS substrate C-terminal domain AM341_RS08350 PF09179 TilS substrate binding domain AM341_RS08355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM341_RS08360 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM341_RS08360 PF01276 Orn/Lys/Arg decarboxylase, major domain AM341_RS08360 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM341_RS08365 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM341_RS08370 PF01336 OB-fold nucleic acid binding domain AM341_RS08370 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM341_RS08370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM341_RS08370 PF02811 PHP domain AM341_RS08370 PF14579 Helix-hairpin-helix motif AM341_RS08375 PF01351 Ribonuclease HII AM341_RS08380 PF02684 Lipid-A-disaccharide synthetase AM341_RS08385 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS08385 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM341_RS08390 PF07977 FabA-like domain AM341_RS08395 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM341_RS08395 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS08400 PF03938 Outer membrane protein (OmpH-like) AM341_RS08405 PF01103 Surface antigen AM341_RS08405 PF07244 Surface antigen variable number repeat AM341_RS08410 PF02163 Peptidase family M50 AM341_RS08410 PF17820 PDZ domain AM341_RS08420 PF01255 Putative undecaprenyl diphosphate synthase AM341_RS08425 PF13288 DXP reductoisomerase C-terminal domain AM341_RS08425 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM341_RS08425 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM341_RS08430 PF01765 Ribosome recycling factor AM341_RS08435 PF00696 Amino acid kinase family AM341_RS08440 PF00889 Elongation factor TS AM341_RS08450 PF00318 Ribosomal protein S2 AM341_RS08460 PF00557 Metallopeptidase family M24 AM341_RS08465 PF01966 HD domain AM341_RS08465 PF01909 Nucleotidyltransferase domain AM341_RS08465 PF08335 GlnD PII-uridylyltransferase AM341_RS08465 PF01842 ACT domain AM341_RS08470 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM341_RS08470 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS08470 PF14602 Hexapeptide repeat of succinyl-transferase AM341_RS08475 PF00149 Calcineurin-like phosphoesterase AM341_RS08480 PF11944 Protein of unknown function (DUF3461) AM341_RS08485 PF05651 Putative sugar diacid recognition AM341_RS08485 PF17853 GGDEF-like domain AM341_RS08485 PF13556 PucR C-terminal helix-turn-helix domain AM341_RS08490 PF00595 PDZ domain AM341_RS08500 PF13286 Phosphohydrolase-associated domain AM341_RS08500 PF01966 HD domain AM341_RS08505 PF01048 Phosphorylase superfamily AM341_RS08510 PF01497 Periplasmic binding protein AM341_RS08515 PF03458 UPF0126 domain AM341_RS08520 PF01521 Iron-sulphur cluster biosynthesis AM341_RS08525 PF00654 Voltage gated chloride channel AM341_RS08530 PF00202 Aminotransferase class-III AM341_RS08535 PF01032 FecCD transport family AM341_RS08540 PF01497 Periplasmic binding protein AM341_RS08545 PF00005 ABC transporter AM341_RS08550 PF07715 TonB-dependent Receptor Plug Domain AM341_RS08550 PF00593 TonB dependent receptor AM341_RS08555 PF14814 Bifunctional transglycosylase second domain AM341_RS08555 PF00905 Penicillin binding protein transpeptidase domain AM341_RS08555 PF00912 Transglycosylase AM341_RS08555 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AM341_RS08565 PF04408 Helicase associated domain (HA2) AM341_RS08565 PF00270 DEAD/DEAH box helicase AM341_RS08565 PF08482 ATP-dependent helicase C-terminal AM341_RS08565 PF00271 Helicase conserved C-terminal domain AM341_RS08570 PF02834 LigT like Phosphoesterase AM341_RS08575 PF03749 Sugar fermentation stimulation protein RE domain AM341_RS08575 PF17746 SfsA N-terminal OB domain AM341_RS08580 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM341_RS08585 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM341_RS08590 PF01743 Poly A polymerase head domain AM341_RS08590 PF12626 Polymerase A arginine-rich C-terminus AM341_RS08590 PF12627 Probable RNA and SrmB- binding site of polymerase A AM341_RS08595 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM341_RS08600 PF00419 Fimbrial protein AM341_RS08605 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS08605 PF02753 Pili assembly chaperone PapD, C-terminal domain AM341_RS08610 PF13954 PapC N-terminal domain AM341_RS08610 PF00577 Outer membrane usher protein AM341_RS08610 PF13953 PapC C-terminal domain AM341_RS08615 PF00419 Fimbrial protein AM341_RS08620 PF00419 Fimbrial protein AM341_RS08625 PF00419 Fimbrial protein AM341_RS08630 PF00419 Fimbrial protein AM341_RS08635 PF02548 Ketopantoate hydroxymethyltransferase AM341_RS08640 PF02569 Pantoate-beta-alanine ligase AM341_RS08645 PF04754 Putative transposase, YhgA-like AM341_RS08660 PF02261 Aspartate decarboxylase AM341_RS08665 PF01522 Polysaccharide deacetylase AM341_RS08670 PF03610 PTS system fructose IIA component AM341_RS08675 PF01061 ABC-2 type transporter AM341_RS08680 PF00005 ABC transporter AM341_RS08685 PF00484 Carbonic anhydrase AM341_RS08690 PF00156 Phosphoribosyl transferase domain AM341_RS08695 PF01011 PQQ enzyme repeat AM341_RS08700 PF07731 Multicopper oxidase AM341_RS08700 PF00394 Multicopper oxidase AM341_RS08700 PF07732 Multicopper oxidase AM341_RS08705 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM341_RS08710 PF17284 Spermidine synthase tetramerisation domain AM341_RS08715 PF02675 S-adenosylmethionine decarboxylase AM341_RS08720 PF06062 Uncharacterised protein family (UPF0231) AM341_RS08725 PF11791 Aconitate B N-terminal domain AM341_RS08725 PF06434 Aconitate hydratase 2 N-terminus AM341_RS08725 PF00330 Aconitase family (aconitate hydratase) AM341_RS08735 PF11737 Protein of unknown function (DUF3300) AM341_RS08740 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS08740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM341_RS08745 PF02817 e3 binding domain AM341_RS08745 PF00364 Biotin-requiring enzyme AM341_RS08745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM341_RS08750 PF17831 Pyruvate dehydrogenase E1 component middle domain AM341_RS08750 PF00456 Transketolase, thiamine diphosphate binding domain AM341_RS08760 PF00392 Bacterial regulatory proteins, gntR family AM341_RS08760 PF07729 FCD domain AM341_RS08765 PF00324 Amino acid permease AM341_RS08770 PF17113 Regulatory signalling modulator protein AmpE AM341_RS08775 PF01510 N-acetylmuramoyl-L-alanine amidase AM341_RS08780 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM341_RS08780 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM341_RS08790 PF07963 Prokaryotic N-terminal methylation motif AM341_RS08795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM341_RS08795 PF00437 Type II/IV secretion system protein AM341_RS08800 PF00482 Type II secretion system (T2SS), protein F AM341_RS08805 PF00478 IMP dehydrogenase / GMP reductase domain AM341_RS08810 PF01121 Dephospho-CoA kinase AM341_RS08815 PF07072 Cell division protein AM341_RS08820 PF03884 DNA gyrase inhibitor YacG AM341_RS08825 PF00293 NUDIX domain AM341_RS08830 PF07517 SecA DEAD-like domain AM341_RS08830 PF07516 SecA Wing and Scaffold domain AM341_RS08830 PF01043 SecA preprotein cross-linking domain AM341_RS08830 PF02810 SEC-C motif AM341_RS08835 PF06558 Secretion monitor precursor protein (SecM) AM341_RS08840 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM341_RS08845 PF12327 FtsZ family, C-terminal domain AM341_RS08845 PF00091 Tubulin/FtsZ family, GTPase domain AM341_RS08850 PF02491 SHS2 domain inserted in FTSA AM341_RS08855 PF08478 POTRA domain, FtsQ-type AM341_RS08855 PF03799 Cell division protein FtsQ AM341_RS08860 PF07478 D-ala D-ala ligase C-terminus AM341_RS08860 PF01820 D-ala D-ala ligase N-terminus AM341_RS08865 PF08245 Mur ligase middle domain AM341_RS08865 PF01225 Mur ligase family, catalytic domain AM341_RS08865 PF02875 Mur ligase family, glutamate ligase domain AM341_RS08870 PF04101 Glycosyltransferase family 28 C-terminal domain AM341_RS08870 PF03033 Glycosyltransferase family 28 N-terminal domain AM341_RS08875 PF01098 Cell cycle protein AM341_RS08880 PF08245 Mur ligase middle domain AM341_RS08880 PF02875 Mur ligase family, glutamate ligase domain AM341_RS08885 PF00953 Glycosyl transferase family 4 AM341_RS08885 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM341_RS08890 PF02875 Mur ligase family, glutamate ligase domain AM341_RS08890 PF01225 Mur ligase family, catalytic domain AM341_RS08890 PF08245 Mur ligase middle domain AM341_RS08895 PF02875 Mur ligase family, glutamate ligase domain AM341_RS08895 PF08245 Mur ligase middle domain AM341_RS08895 PF01225 Mur ligase family, catalytic domain AM341_RS08900 PF00905 Penicillin binding protein transpeptidase domain AM341_RS08900 PF03717 Penicillin-binding Protein dimerisation domain AM341_RS08905 PF04999 Cell division protein FtsL AM341_RS08910 PF01795 MraW methylase family AM341_RS08915 PF02381 MraZ protein, putative antitoxin-like AM341_RS08925 PF00356 Bacterial regulatory proteins, lacI family AM341_RS08925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM341_RS08935 PF10369 Small subunit of acetolactate synthase AM341_RS08940 PF00205 Thiamine pyrophosphate enzyme, central domain AM341_RS08940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM341_RS08940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM341_RS08945 PF03466 LysR substrate binding domain AM341_RS08945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS08950 PF08054 Leucine operon leader peptide AM341_RS08955 PF08502 LeuA allosteric (dimerisation) domain AM341_RS08955 PF00682 HMGL-like AM341_RS08960 PF00180 Isocitrate/isopropylmalate dehydrogenase AM341_RS08965 PF00330 Aconitase family (aconitate hydratase) AM341_RS08970 PF00694 Aconitase C-terminal domain AM341_RS08975 PF07690 Major Facilitator Superfamily AM341_RS08985 PF12793 Sugar transport-related sRNA regulator N-term AM341_RS08985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS09000 PF00005 ABC transporter AM341_RS09005 PF09335 SNARE associated Golgi protein AM341_RS09010 PF02311 AraC-like ligand binding domain AM341_RS09010 PF12833 Helix-turn-helix domain AM341_RS09020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS09025 PF11762 L-arabinose isomerase C-terminal domain AM341_RS09025 PF02610 L-arabinose isomerase AM341_RS09030 PF00596 Class II Aldolase and Adducin N-terminal domain AM341_RS09035 PF03104 DNA polymerase family B, exonuclease domain AM341_RS09035 PF00136 DNA polymerase family B AM341_RS09040 PF00271 Helicase conserved C-terminal domain AM341_RS09040 PF12137 RNA polymerase recycling family C-terminal AM341_RS09040 PF18337 RapA N-terminal Tudor like domain AM341_RS09040 PF18339 RapA N-terminal Tudor like domain 1 AM341_RS09040 PF00176 SNF2 family N-terminal domain AM341_RS09045 PF00849 RNA pseudouridylate synthase AM341_RS09060 PF00226 DnaJ domain AM341_RS09060 PF05099 Tellurite resistance protein TerB AM341_RS09065 PF03968 OstA-like protein AM341_RS09065 PF04453 LPS transport system D AM341_RS09070 PF09312 SurA N-terminal domain AM341_RS09070 PF00639 PPIC-type PPIASE domain AM341_RS09075 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM341_RS09080 PF00398 Ribosomal RNA adenine dimethylase AM341_RS09085 PF04379 ApaG domain AM341_RS09090 PF00149 Calcineurin-like phosphoesterase AM341_RS09095 PF00186 Dihydrofolate reductase AM341_RS09100 PF00999 Sodium/hydrogen exchanger family AM341_RS09100 PF02254 TrkA-N domain AM341_RS09105 PF02525 Flavodoxin-like fold AM341_RS09110 PF00083 Sugar (and other) transporter AM341_RS09120 PF01494 FAD binding domain AM341_RS09125 PF00766 Electron transfer flavoprotein FAD-binding domain AM341_RS09125 PF01012 Electron transfer flavoprotein domain AM341_RS09130 PF01012 Electron transfer flavoprotein domain AM341_RS09135 PF02028 BCCT, betaine/carnitine/choline family transporter AM341_RS09140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM341_RS09140 PF02770 Acyl-CoA dehydrogenase, middle domain AM341_RS09140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM341_RS09145 PF02515 CoA-transferase family III AM341_RS09150 PF00501 AMP-binding enzyme AM341_RS09150 PF13193 AMP-binding enzyme C-terminal domain AM341_RS09155 PF00378 Enoyl-CoA hydratase/isomerase AM341_RS09160 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS09165 PF07180 CaiF/GrlA transcriptional regulator AM341_RS09175 PF02142 MGS-like domain AM341_RS09175 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM341_RS09175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM341_RS09180 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM341_RS09180 PF00117 Glutamine amidotransferase class-I AM341_RS09190 PF01113 Dihydrodipicolinate reductase, N-terminus AM341_RS09190 PF05173 Dihydrodipicolinate reductase, C-terminus AM341_RS09195 PF01156 Inosine-uridine preferring nucleoside hydrolase AM341_RS09200 PF02401 LytB protein AM341_RS09205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM341_RS09210 PF01252 Signal peptidase (SPase) II AM341_RS09215 PF06827 Zinc finger found in FPG and IleRS AM341_RS09215 PF00133 tRNA synthetases class I (I, L, M and V) AM341_RS09215 PF08264 Anticodon-binding domain of tRNA AM341_RS09220 PF01687 Riboflavin kinase AM341_RS09220 PF06574 FAD synthetase AM341_RS09225 PF10837 Protein of unknown function (DUF2575) AM341_RS09230 PF01649 Ribosomal protein S20 AM341_RS09250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS09250 PF03466 LysR substrate binding domain AM341_RS09255 PF06965 Na+/H+ antiporter 1 AM341_RS09265 PF01848 Hok/gef family AM341_RS09270 PF01609 Transposase DDE domain AM341_RS09280 PF00684 DnaJ central domain AM341_RS09280 PF01556 DnaJ C terminal domain AM341_RS09280 PF00226 DnaJ domain AM341_RS09285 PF00012 Hsp70 protein AM341_RS09290 PF10807 Protein of unknown function (DUF2541) AM341_RS09295 PF13099 Domain of unknown function (DUF3944) AM341_RS09295 PF03981 Ubiquinol-cytochrome C chaperone AM341_RS09300 PF01184 GPR1/FUN34/yaaH family AM341_RS09305 PF00994 Probable molybdopterin binding domain AM341_RS09310 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM341_RS09315 PF01235 Sodium:alanine symporter family AM341_RS09320 PF03883 Peroxide stress protein YaaA AM341_RS09325 PF10697 Protein of unknown function (DUF2502) AM341_RS09330 PF00291 Pyridoxal-phosphate dependent enzyme AM341_RS09330 PF14821 Threonine synthase N terminus AM341_RS09335 PF08544 GHMP kinases C terminal AM341_RS09335 PF00288 GHMP kinases N terminal domain AM341_RS09340 PF13840 ACT domain AM341_RS09340 PF03447 Homoserine dehydrogenase, NAD binding domain AM341_RS09340 PF00742 Homoserine dehydrogenase AM341_RS09340 PF00696 Amino acid kinase family AM341_RS09340 PF01842 ACT domain AM341_RS09345 PF08254 Threonine leader peptide AM341_RS09350 PF00588 SpoU rRNA Methylase family AM341_RS09360 PF00486 Transcriptional regulatory protein, C terminal AM341_RS09360 PF00072 Response regulator receiver domain AM341_RS09365 PF06123 Inner membrane protein CreD AM341_RS09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS09370 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS09370 PF00672 HAMP domain AM341_RS09375 PF00072 Response regulator receiver domain AM341_RS09375 PF00486 Transcriptional regulatory protein, C terminal AM341_RS09380 PF05981 CreA protein AM341_RS09385 PF12833 Helix-turn-helix domain AM341_RS09385 PF06445 GyrI-like small molecule binding domain AM341_RS09390 PF00300 Histidine phosphatase superfamily (branch 1) AM341_RS09395 PF01931 Protein of unknown function DUF84 AM341_RS09400 PF01371 Trp repressor protein AM341_RS09405 PF01464 Transglycosylase SLT domain AM341_RS09405 PF14718 Soluble lytic murein transglycosylase L domain AM341_RS09415 PF12848 ABC transporter AM341_RS09415 PF00005 ABC transporter AM341_RS09420 PF01381 Helix-turn-helix AM341_RS09420 PF13521 AAA domain AM341_RS09425 PF18073 Rubredoxin metal binding domain AM341_RS09430 PF18429 Domain of unknown function (DUF5609) AM341_RS09435 PF10144 Bacterial virulence factor haemolysin AM341_RS09440 PF10437 Bacterial lipoate protein ligase C-terminus AM341_RS09440 PF03099 Biotin/lipoate A/B protein ligase family AM341_RS09445 PF01048 Phosphorylase superfamily AM341_RS09450 PF01676 Metalloenzyme superfamily AM341_RS09455 PF00591 Glycosyl transferase family, a/b domain AM341_RS09455 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM341_RS09455 PF02885 Glycosyl transferase family, helical bundle domain AM341_RS09460 PF01791 DeoC/LacD family aldolase AM341_RS09465 PF11230 Protein of unknown function (DUF3029) AM341_RS09470 PF04055 Radical SAM superfamily AM341_RS09475 PF01026 TatD related DNase AM341_RS09480 PF01734 Patatin-like phospholipase AM341_RS09485 PF07043 Protein of unknown function (DUF1328) AM341_RS09490 PF04972 BON domain AM341_RS09495 PF03144 Elongation factor Tu domain 2 AM341_RS09495 PF16658 Class II release factor RF3, C-terminal domain AM341_RS09495 PF00009 Elongation factor Tu GTP binding domain AM341_RS09500 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS09505 PF00583 Acetyltransferase (GNAT) family AM341_RS09510 PF03603 DNA polymerase III psi subunit AM341_RS09515 PF08468 Methyltransferase small domain N-terminal AM341_RS09515 PF05175 Methyltransferase small domain AM341_RS09535 PF07256 Protein of unknown function (DUF1435) AM341_RS09540 PF11575 FhuF 2Fe-2S C-terminal domain AM341_RS09540 PF06276 Ferric iron reductase FhuF-like transporter AM341_RS09545 PF00196 Bacterial regulatory proteins, luxR family AM341_RS09550 PF00196 Bacterial regulatory proteins, luxR family AM341_RS09555 PF06738 Putative threonine/serine exporter AM341_RS09560 PF12821 Threonine/Serine exporter, ThrE AM341_RS09565 PF17948 DnaT DNA-binding domain AM341_RS09570 PF01695 IstB-like ATP binding protein AM341_RS09575 PF10696 Protein of unknown function (DUF2501) AM341_RS09580 PF00884 Sulfatase AM341_RS09585 PF00107 Zinc-binding dehydrogenase AM341_RS09585 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS09590 PF00392 Bacterial regulatory proteins, gntR family AM341_RS09590 PF07729 FCD domain AM341_RS09595 PF07690 Major Facilitator Superfamily AM341_RS09600 PF00672 HAMP domain AM341_RS09600 PF02203 Tar ligand binding domain homologue AM341_RS09600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM341_RS09610 PF13722 5TM C-terminal transporter carbon starvation CstA AM341_RS09610 PF02554 Carbon starvation protein CstA AM341_RS09615 PF04328 Selenoprotein, putative AM341_RS09620 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM341_RS09620 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM341_RS09640 PF07690 Major Facilitator Superfamily AM341_RS09645 PF04286 Protein of unknown function (DUF445) AM341_RS09650 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AM341_RS09655 PF01869 BadF/BadG/BcrA/BcrD ATPase family AM341_RS09660 PF11823 Protein of unknown function (DUF3343) AM341_RS09665 PF06977 SdiA-regulated AM341_RS09670 PF06779 Uncharacterised MFS-type transporter YbfB AM341_RS09675 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AM341_RS09680 PF07670 Nucleoside recognition AM341_RS09685 PF07670 Nucleoside recognition AM341_RS09690 PF01979 Amidohydrolase family AM341_RS09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS09695 PF03466 LysR substrate binding domain AM341_RS09700 PF04965 Gene 25-like lysozyme AM341_RS09715 PF00392 Bacterial regulatory proteins, gntR family AM341_RS09715 PF07729 FCD domain AM341_RS09725 PF01232 Mannitol dehydrogenase Rossmann domain AM341_RS09725 PF08125 Mannitol dehydrogenase C-terminal domain AM341_RS09730 PF03786 D-mannonate dehydratase (UxuA) AM341_RS09740 PF02447 GntP family permease AM341_RS09765 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM341_RS09775 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase AM341_RS09795 PF05717 IS66 Orf2 like protein AM341_RS09800 PF03050 Transposase IS66 family AM341_RS09800 PF13817 IS66 C-terminal element AM341_RS09800 PF13007 Transposase C of IS166 homeodomain AM341_RS09800 PF13005 zinc-finger binding domain of transposase IS66 AM341_RS09820 PF13737 Transposase DDE domain AM341_RS09850 PF04542 Sigma-70 region 2 AM341_RS09850 PF08281 Sigma-70, region 4 AM341_RS09855 PF04773 FecR protein AM341_RS09855 PF16220 Domain of unknown function (DUF4880) AM341_RS09860 PF00593 TonB dependent receptor AM341_RS09860 PF07715 TonB-dependent Receptor Plug Domain AM341_RS09860 PF07660 Secretin and TonB N terminus short domain AM341_RS09865 PF01497 Periplasmic binding protein AM341_RS09870 PF01032 FecCD transport family AM341_RS09875 PF01032 FecCD transport family AM341_RS09880 PF00005 ABC transporter AM341_RS09895 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM341_RS09910 PF01522 Polysaccharide deacetylase AM341_RS09915 PF00534 Glycosyl transferases group 1 AM341_RS09915 PF13439 Glycosyltransferase Family 4 AM341_RS09920 PF04393 Protein of unknown function (DUF535) AM341_RS09925 PF03279 Bacterial lipid A biosynthesis acyltransferase AM341_RS09930 PF13276 HTH-like domain AM341_RS09930 PF00665 Integrase core domain AM341_RS09930 PF13333 Integrase core domain AM341_RS09935 PF02028 BCCT, betaine/carnitine/choline family transporter AM341_RS09945 PF10011 Predicted membrane protein (DUF2254) AM341_RS09955 PF16925 Tetracyclin repressor-like, C-terminal domain AM341_RS09955 PF00440 Bacterial regulatory proteins, tetR family AM341_RS09960 PF01695 IstB-like ATP binding protein AM341_RS09975 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM341_RS09990 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM341_RS10055 PF00589 Phage integrase family AM341_RS10055 PF13356 Arm DNA-binding domain AM341_RS10065 PF00107 Zinc-binding dehydrogenase AM341_RS10065 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS10070 PF05872 Bacterial protein of unknown function (DUF853) AM341_RS10075 PF03739 Lipopolysaccharide export system permease LptF/LptG AM341_RS10080 PF03739 Lipopolysaccharide export system permease LptF/LptG AM341_RS10085 PF02789 Cytosol aminopeptidase family, N-terminal domain AM341_RS10085 PF00883 Cytosol aminopeptidase family, catalytic domain AM341_RS10090 PF04364 DNA polymerase III chi subunit, HolC AM341_RS10095 PF00133 tRNA synthetases class I (I, L, M and V) AM341_RS10095 PF10458 Valyl tRNA synthetase tRNA binding arm AM341_RS10095 PF08264 Anticodon-binding domain of tRNA AM341_RS10100 PF05987 Bacterial protein of unknown function (DUF898) AM341_RS10105 PF00583 Acetyltransferase (GNAT) family AM341_RS10110 PF06877 Regulator of ribonuclease activity B AM341_RS10115 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM341_RS10115 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM341_RS10125 PF04074 YhcH/YjgK/YiaL AM341_RS10130 PF00440 Bacterial regulatory proteins, tetR family AM341_RS10140 PF01042 Endoribonuclease L-PSP AM341_RS10150 PF08052 PyrBI operon leader peptide AM341_RS10155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM341_RS10155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM341_RS10160 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AM341_RS10160 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AM341_RS10165 PF01042 Endoribonuclease L-PSP AM341_RS10170 PF00690 Cation transporter/ATPase, N-terminus AM341_RS10170 PF00689 Cation transporting ATPase, C-terminus AM341_RS10175 PF17059 MgtA leader peptide AM341_RS10180 PF00356 Bacterial regulatory proteins, lacI family AM341_RS10185 PF02378 Phosphotransferase system, EIIC AM341_RS10185 PF00367 phosphotransferase system, EIIB AM341_RS10190 PF11941 Domain of unknown function (DUF3459) AM341_RS10190 PF00128 Alpha amylase, catalytic domain AM341_RS10195 PF03477 ATP cone domain AM341_RS10195 PF13597 Anaerobic ribonucleoside-triphosphate reductase AM341_RS10205 PF07361 Cytochrome b562 AM341_RS10210 PF01523 Putative modulator of DNA gyrase AM341_RS10215 PF04751 Protein of unknown function (DUF615) AM341_RS10220 PF08245 Mur ligase middle domain AM341_RS10220 PF01225 Mur ligase family, catalytic domain AM341_RS10220 PF02875 Mur ligase family, glutamate ligase domain AM341_RS10225 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM341_RS10230 PF02653 Branched-chain amino acid transport system / permease component AM341_RS10235 PF02653 Branched-chain amino acid transport system / permease component AM341_RS10240 PF00005 ABC transporter AM341_RS10245 PF13407 Periplasmic binding protein domain AM341_RS10250 PF00719 Inorganic pyrophosphatase AM341_RS10255 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM341_RS10260 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM341_RS10265 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AM341_RS10270 PF04357 TamB, inner membrane protein subunit of TAM complex AM341_RS10275 PF01103 Surface antigen AM341_RS10275 PF07244 Surface antigen variable number repeat AM341_RS10275 PF17243 POTRA domain TamA domain 1 AM341_RS10285 PF01625 Peptide methionine sulfoxide reductase AM341_RS10290 PF00571 CBS domain AM341_RS10290 PF03471 Transporter associated domain AM341_RS10290 PF01595 Cyclin M transmembrane N-terminal domain AM341_RS10295 PF06526 Protein of unknown function (DUF1107) AM341_RS10300 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM341_RS10315 PF00459 Inositol monophosphatase family AM341_RS10320 PF02872 5'-nucleotidase, C-terminal domain AM341_RS10320 PF00149 Calcineurin-like phosphoesterase AM341_RS10325 PF01638 HxlR-like helix-turn-helix AM341_RS10330 PF05368 NmrA-like family AM341_RS10335 PF00892 EamA-like transporter family AM341_RS10340 PF01814 Hemerythrin HHE cation binding domain AM341_RS10340 PF04405 Domain of Unknown function (DUF542) AM341_RS10345 PF00324 Amino acid permease AM341_RS10350 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM341_RS10350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM341_RS10360 PF04225 Opacity-associated protein A LysM-like domain AM341_RS10360 PF08525 Opacity-associated protein A N-terminal motif AM341_RS10370 PF01385 Probable transposase AM341_RS10370 PF12323 Helix-turn-helix domain AM341_RS10370 PF07282 Putative transposase DNA-binding domain AM341_RS10375 PF01797 Transposase IS200 like AM341_RS10385 PF10887 Protein of unknown function (DUF2686) AM341_RS10390 PF03948 Ribosomal protein L9, C-terminal domain AM341_RS10390 PF01281 Ribosomal protein L9, N-terminal domain AM341_RS10395 PF01084 Ribosomal protein S18 AM341_RS10400 PF00436 Single-strand binding protein family AM341_RS10405 PF01250 Ribosomal protein S6 AM341_RS10410 PF07338 Protein of unknown function (DUF1471) AM341_RS10415 PF07274 Protein of unknown function (DUF1440) AM341_RS10420 PF00596 Class II Aldolase and Adducin N-terminal domain AM341_RS10425 PF01261 Xylose isomerase-like TIM barrel AM341_RS10430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM341_RS10435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS10440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS10455 PF08220 DeoR-like helix-turn-helix domain AM341_RS10455 PF00455 DeoR C terminal sensor domain AM341_RS10460 PF00326 Prolyl oligopeptidase family AM341_RS10465 PF07338 Protein of unknown function (DUF1471) AM341_RS10470 PF07338 Protein of unknown function (DUF1471) AM341_RS10480 PF18158 Adaptive response protein AidB N-terminal domain AM341_RS10480 PF02770 Acyl-CoA dehydrogenase, middle domain AM341_RS10480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM341_RS10485 PF03738 Glutathionylspermidine synthase preATP-grasp AM341_RS10490 PF06693 Protein of unknown function (DUF1190) AM341_RS10495 PF03994 Domain of Unknown Function (DUF350) AM341_RS10500 PF10679 Protein of unknown function (DUF2491) AM341_RS10515 PF08666 SAF domain AM341_RS10515 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM341_RS10520 PF07690 Major Facilitator Superfamily AM341_RS10525 PF00701 Dihydrodipicolinate synthetase family AM341_RS10530 PF01614 Bacterial transcriptional regulator AM341_RS10530 PF09339 IclR helix-turn-helix domain AM341_RS10535 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM341_RS10535 PF00588 SpoU rRNA Methylase family AM341_RS10545 PF08461 Ribonuclease R winged-helix domain AM341_RS10545 PF00773 RNB domain AM341_RS10545 PF00575 S1 RNA binding domain AM341_RS10545 PF08206 Ribonuclease B OB domain AM341_RS10545 PF17876 Cold shock domain AM341_RS10550 PF02082 Transcriptional regulator AM341_RS10555 PF00709 Adenylosuccinate synthetase AM341_RS10560 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AM341_RS10565 PF01145 SPFH domain / Band 7 family AM341_RS10570 PF01145 SPFH domain / Band 7 family AM341_RS10570 PF12221 Bacterial membrane protein N terminal AM341_RS10575 PF13167 GTP-binding GTPase N-terminal AM341_RS10575 PF16360 GTP-binding GTPase Middle Region AM341_RS10575 PF01926 50S ribosome-binding GTPase AM341_RS10580 PF17209 Hfq protein AM341_RS10590 PF08676 MutL C terminal dimerisation domain AM341_RS10590 PF01119 DNA mismatch repair protein, C-terminal domain AM341_RS10595 PF01520 N-acetylmuramoyl-L-alanine amidase AM341_RS10600 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM341_RS10605 PF01256 Carbohydrate kinase AM341_RS10605 PF03853 YjeF-related protein N-terminus AM341_RS10610 PF08331 Domain of unknown function (DUF1730) AM341_RS10630 PF00929 Exonuclease AM341_RS10640 PF03193 RsgA GTPase AM341_RS10645 PF02666 Phosphatidylserine decarboxylase AM341_RS10650 PF00924 Mechanosensitive ion channel AM341_RS10650 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM341_RS10650 PF12795 Mechanosensitive ion channel porin domain AM341_RS10655 PF10840 Protein of unknown function (DUF2645) AM341_RS10665 PF13520 Amino acid permease AM341_RS10670 PF00152 tRNA synthetases class II (D, K and N) AM341_RS10675 PF02910 Fumarate reductase flavoprotein C-term AM341_RS10675 PF00890 FAD binding domain AM341_RS10680 PF13085 2Fe-2S iron-sulfur cluster binding domain AM341_RS10680 PF13183 4Fe-4S dicluster domain AM341_RS10685 PF02300 Fumarate reductase subunit C AM341_RS10690 PF02313 Fumarate reductase subunit D AM341_RS10695 PF00144 Beta-lactamase AM341_RS10700 PF08212 Lipocalin-like domain AM341_RS10705 PF00893 Small Multidrug Resistance protein AM341_RS10710 PF08085 Entericidin EcnA/B family AM341_RS10715 PF08085 Entericidin EcnA/B family AM341_RS10720 PF01132 Elongation factor P (EF-P) OB domain AM341_RS10720 PF08207 Elongation factor P (EF-P) KOW-like domain AM341_RS10720 PF09285 Elongation factor P, C-terminal AM341_RS10725 PF04055 Radical SAM superfamily AM341_RS10730 PF15922 YjeJ-like AM341_RS10735 PF13698 Domain of unknown function (DUF4156) AM341_RS10740 PF00118 TCP-1/cpn60 chaperonin family AM341_RS10745 PF00166 Chaperonin 10 Kd subunit AM341_RS10750 PF13520 Amino acid permease AM341_RS10755 PF04186 FxsA cytoplasmic membrane protein AM341_RS10760 PF10415 Fumarase C C-terminus AM341_RS10760 PF00206 Lyase AM341_RS10765 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM341_RS10770 PF03091 CutA1 divalent ion tolerance protein AM341_RS10775 PF11412 Disulphide bond corrector protein DsbC AM341_RS10775 PF02683 Cytochrome C biogenesis protein transmembrane region AM341_RS10795 PF18500 CadC C-terminal domain 1 AM341_RS10795 PF00486 Transcriptional regulatory protein, C terminal AM341_RS10800 PF13520 Amino acid permease AM341_RS10805 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM341_RS10805 PF01276 Orn/Lys/Arg decarboxylase, major domain AM341_RS10805 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM341_RS10810 PF00854 POT family AM341_RS10815 PF00152 tRNA synthetases class II (D, K and N) AM341_RS10815 PF01336 OB-fold nucleic acid binding domain AM341_RS10820 PF10753 Toxin GhoT_OrtT AM341_RS10825 PF11080 Endoribonuclease GhoS AM341_RS10835 PF14542 GCN5-related N-acetyl-transferase AM341_RS10840 PF06902 Divergent 4Fe-4S mono-cluster AM341_RS10845 PF17203 Single cache domain 3 AM341_RS10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS10845 PF00989 PAS fold AM341_RS10845 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM341_RS10850 PF00072 Response regulator receiver domain AM341_RS10860 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM341_RS10865 PF05683 Fumarase C-terminus AM341_RS10865 PF05681 Fumarate hydratase (Fumerase) AM341_RS10870 PF09997 Predicted membrane protein (DUF2238) AM341_RS10880 PF02056 Family 4 glycosyl hydrolase AM341_RS10880 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM341_RS10885 PF12833 Helix-turn-helix domain AM341_RS10890 PF01276 Orn/Lys/Arg decarboxylase, major domain AM341_RS10890 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM341_RS10890 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM341_RS10895 PF12833 Helix-turn-helix domain AM341_RS10900 PF13520 Amino acid permease AM341_RS10905 PF00884 Sulfatase AM341_RS10905 PF08019 Phosphoethanolamine transferase EptA/EptB AM341_RS10910 PF00486 Transcriptional regulatory protein, C terminal AM341_RS10910 PF00072 Response regulator receiver domain AM341_RS10915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS10915 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS10925 PF08946 Osmosensory transporter coiled coil AM341_RS10925 PF00083 Sugar (and other) transporter AM341_RS10930 PF13990 YjcZ-like protein AM341_RS10945 PF03831 PhnA domain AM341_RS10945 PF08274 PhnA Zinc-Ribbon AM341_RS10950 PF06983 3-demethylubiquinone-9 3-methyltransferase AM341_RS10955 PF00005 ABC transporter AM341_RS10970 PF07702 UTRA domain AM341_RS10970 PF00392 Bacterial regulatory proteins, gntR family AM341_RS10975 PF06754 Phosphonate metabolism protein PhnG AM341_RS10980 PF05845 Bacterial phosphonate metabolism protein (PhnH) AM341_RS10985 PF05861 Bacterial phosphonate metabolism protein (PhnI) AM341_RS10990 PF06007 Phosphonate metabolism protein PhnJ AM341_RS10995 PF00005 ABC transporter AM341_RS11000 PF00005 ABC transporter AM341_RS11005 PF07969 Amidohydrolase family AM341_RS11015 PF00583 Acetyltransferase (GNAT) family AM341_RS11020 PF12706 Beta-lactamase superfamily domain AM341_RS11030 PF02502 Ribose/Galactose Isomerase AM341_RS11040 PF01418 Helix-turn-helix domain, rpiR family AM341_RS11040 PF01380 SIS domain AM341_RS11045 PF13407 Periplasmic binding protein domain AM341_RS11050 PF00005 ABC transporter AM341_RS11055 PF02653 Branched-chain amino acid transport system / permease component AM341_RS11060 PF00834 Ribulose-phosphate 3 epimerase family AM341_RS11065 PF00480 ROK family AM341_RS11070 PF14864 Alkyl sulfatase C-terminal AM341_RS11070 PF14863 Alkyl sulfatase dimerisation AM341_RS11070 PF00753 Metallo-beta-lactamase superfamily AM341_RS11075 PF17090 Uncharacterised protein family AM341_RS11080 PF00529 HlyD membrane-fusion protein of T1SS AM341_RS11080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS11085 PF04632 Fusaric acid resistance protein family AM341_RS11090 PF02321 Outer membrane efflux protein AM341_RS11100 PF08238 Sel1 repeat AM341_RS11105 PF00375 Sodium:dicarboxylate symporter family AM341_RS11120 PF03918 Cytochrome C biogenesis protein AM341_RS11125 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM341_RS11125 PF01578 Cytochrome C assembly protein AM341_RS11130 PF03916 Polysulphide reductase, NrfD AM341_RS11135 PF00037 4Fe-4S binding domain AM341_RS11135 PF13247 4Fe-4S dicluster domain AM341_RS11140 PF13435 Cytochrome c554 and c-prime AM341_RS11140 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AM341_RS11145 PF02335 Cytochrome c552 AM341_RS11155 PF00501 AMP-binding enzyme AM341_RS11155 PF16177 Acetyl-coenzyme A synthetase N-terminus AM341_RS11155 PF13193 AMP-binding enzyme C-terminal domain AM341_RS11160 PF04341 Protein of unknown function, DUF485 AM341_RS11165 PF00474 Sodium:solute symporter family AM341_RS11170 PF00805 Pentapeptide repeats (8 copies) AM341_RS11175 PF00999 Sodium/hydrogen exchanger family AM341_RS11180 PF00860 Permease family AM341_RS11200 PF00376 MerR family regulatory protein AM341_RS11200 PF09278 MerR, DNA binding AM341_RS11205 PF12833 Helix-turn-helix domain AM341_RS11210 PF00563 EAL domain AM341_RS11210 PF12792 CSS motif domain associated with EAL AM341_RS11220 PF15940 Family of unknown function AM341_RS11255 PF00589 Phage integrase family AM341_RS11255 PF02899 Phage integrase, N-terminal SAM-like domain AM341_RS11260 PF00436 Single-strand binding protein family AM341_RS11265 PF17760 UvrA interaction domain AM341_RS11265 PF00005 ABC transporter AM341_RS11265 PF17755 UvrA DNA-binding domain AM341_RS11270 PF04237 YjbR AM341_RS11275 PF01894 Uncharacterised protein family UPF0047 AM341_RS11280 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM341_RS11290 PF00155 Aminotransferase class I and II AM341_RS11295 PF00842 Alanine racemase, C-terminal domain AM341_RS11295 PF01168 Alanine racemase, N-terminal domain AM341_RS11300 PF00772 DnaB-like helicase N terminal domain AM341_RS11300 PF03796 DnaB-like helicase C terminal domain AM341_RS11305 PF00107 Zinc-binding dehydrogenase AM341_RS11305 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS11310 PF09583 Phage shock protein G (Phageshock_PspG) AM341_RS11315 PF01207 Dihydrouridine synthase (Dus) AM341_RS11325 PF06183 DinI-like family AM341_RS11330 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM341_RS11335 PF08400 Prophage tail fibre N-terminal AM341_RS11335 PF07484 Phage Tail Collar Domain AM341_RS11335 PF03335 Phage tail fibre repeat AM341_RS11340 PF06316 Enterobacterial Ail/Lom protein AM341_RS11410 PF00574 Clp protease AM341_RS11450 PF03245 Bacteriophage Rz lysis protein AM341_RS11455 PF00959 Phage lysozyme AM341_RS11460 PF04971 Bacteriophage P21 holin S AM341_RS11465 PF01555 DNA methylase AM341_RS11485 PF00145 C-5 cytosine-specific DNA methylase AM341_RS11495 PF06147 Protein of unknown function (DUF968) AM341_RS11505 PF05866 Endodeoxyribonuclease RusA AM341_RS11510 PF00717 Peptidase S24-like AM341_RS11510 PF01726 LexA DNA binding domain AM341_RS11515 PF06069 PerC transcriptional activator AM341_RS11600 PF01207 Dihydrouridine synthase (Dus) AM341_RS11605 PF10897 Protein of unknown function (DUF2713) AM341_RS11615 PF01475 Ferric uptake regulator family AM341_RS11620 PF05532 CsbD-like AM341_RS11625 PF01554 MatE AM341_RS11630 PF01726 LexA DNA binding domain AM341_RS11630 PF00717 Peptidase S24-like AM341_RS11635 PF01219 Prokaryotic diacylglycerol kinase AM341_RS11640 PF01553 Acyltransferase AM341_RS11645 PF01040 UbiA prenyltransferase family AM341_RS11650 PF04345 Chorismate lyase AM341_RS11660 PF13981 SopA-like central domain AM341_RS11660 PF13599 Pentapeptide repeats (9 copies) AM341_RS11670 PF07148 Maltose operon periplasmic protein precursor (MalM) AM341_RS11675 PF02264 LamB porin AM341_RS11680 PF00005 ABC transporter AM341_RS11680 PF17912 MalK OB fold domain AM341_RS11690 PF01547 Bacterial extracellular solute-binding protein AM341_RS11695 PF14785 Maltose transport system permease protein MalF P2 domain AM341_RS11695 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS11700 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS11705 PF00083 Sugar (and other) transporter AM341_RS11710 PF06146 Phosphate-starvation-inducible E AM341_RS11715 PF17089 Uncharacterised protein family AM341_RS11720 PF06082 Exopolysaccharide biosynthesis protein YbjH AM341_RS11725 PF06251 Capsule biosynthesis GfcC AM341_RS11730 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AM341_RS11735 PF11106 Exopolysaccharide production protein YjbE AM341_RS11740 PF00342 Phosphoglucose isomerase AM341_RS11750 PF00696 Amino acid kinase family AM341_RS11750 PF01842 ACT domain AM341_RS11755 PF11656 YjbD family (DUF3811) AM341_RS11760 PF00849 RNA pseudouridylate synthase AM341_RS11760 PF01479 S4 domain AM341_RS11765 PF03575 Peptidase family S51 AM341_RS11770 PF02690 Na+/Pi-cotransporter AM341_RS11775 PF02574 Homocysteine S-methyltransferase AM341_RS11775 PF00809 Pterin binding enzyme AM341_RS11775 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM341_RS11775 PF02607 B12 binding domain AM341_RS11775 PF02310 B12 binding domain AM341_RS11780 PF01614 Bacterial transcriptional regulator AM341_RS11780 PF09339 IclR helix-turn-helix domain AM341_RS11785 PF07906 ShET2 enterotoxin, N-terminal region AM341_RS11790 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM341_RS11795 PF00463 Isocitrate lyase family AM341_RS11800 PF01274 Malate synthase AM341_RS11805 PF04204 Homoserine O-succinyltransferase AM341_RS11810 PF13673 Acetyltransferase (GNAT) domain AM341_RS11845 PF01808 AICARFT/IMPCHase bienzyme AM341_RS11845 PF02142 MGS-like domain AM341_RS11850 PF02844 Phosphoribosylglycinamide synthetase, N domain AM341_RS11850 PF02843 Phosphoribosylglycinamide synthetase, C domain AM341_RS11850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM341_RS11855 PF02954 Bacterial regulatory protein, Fis family AM341_RS11855 PF00072 Response regulator receiver domain AM341_RS11855 PF00158 Sigma-54 interaction domain AM341_RS11860 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS11870 PF13801 Heavy-metal resistance AM341_RS11875 PF07356 Protein of unknown function (DUF1481) AM341_RS11880 PF00216 Bacterial DNA-binding protein AM341_RS11885 PF04222 Protein of unknown function (DUF416) AM341_RS11890 PF04493 Endonuclease V AM341_RS11895 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM341_RS11900 PF00293 NUDIX domain AM341_RS11900 PF09297 NADH pyrophosphatase zinc ribbon domain AM341_RS11905 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AM341_RS11910 PF13667 ThiC-associated domain AM341_RS11910 PF01964 Radical SAM ThiC family AM341_RS11915 PF02581 Thiamine monophosphate synthase AM341_RS11920 PF00899 ThiF family AM341_RS11925 PF02597 ThiS family AM341_RS11930 PF05690 Thiazole biosynthesis protein ThiG AM341_RS11935 PF04055 Radical SAM superfamily AM341_RS11935 PF06968 Biotin and Thiamin Synthesis associated domain AM341_RS11945 PF04983 RNA polymerase Rpb1, domain 3 AM341_RS11945 PF04998 RNA polymerase Rpb1, domain 5 AM341_RS11945 PF05000 RNA polymerase Rpb1, domain 4 AM341_RS11945 PF04997 RNA polymerase Rpb1, domain 1 AM341_RS11945 PF00623 RNA polymerase Rpb1, domain 2 AM341_RS11950 PF04565 RNA polymerase Rpb2, domain 3 AM341_RS11950 PF04561 RNA polymerase Rpb2, domain 2 AM341_RS11950 PF04563 RNA polymerase beta subunit AM341_RS11950 PF00562 RNA polymerase Rpb2, domain 6 AM341_RS11950 PF04560 RNA polymerase Rpb2, domain 7 AM341_RS11950 PF10385 RNA polymerase beta subunit external 1 domain AM341_RS11955 PF16320 Ribosomal protein L7/L12 dimerisation domain AM341_RS11955 PF00542 Ribosomal protein L7/L12 C-terminal domain AM341_RS11960 PF00466 Ribosomal protein L10 AM341_RS11970 PF00687 Ribosomal protein L1p/L10e family AM341_RS11975 PF03946 Ribosomal protein L11, N-terminal domain AM341_RS11975 PF00298 Ribosomal protein L11, RNA binding domain AM341_RS11980 PF02357 Transcription termination factor nusG AM341_RS11980 PF00467 KOW motif AM341_RS11985 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM341_RS11990 PF00009 Elongation factor Tu GTP binding domain AM341_RS11990 PF03144 Elongation factor Tu domain 2 AM341_RS11990 PF03143 Elongation factor Tu C-terminal domain AM341_RS12025 PF00485 Phosphoribulokinase / Uridine kinase family AM341_RS12030 PF03099 Biotin/lipoate A/B protein ligase family AM341_RS12030 PF02237 Biotin protein ligase C terminal domain AM341_RS12030 PF08279 HTH domain AM341_RS12035 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM341_RS12035 PF01565 FAD binding domain AM341_RS12060 PF01177 Asp/Glu/Hydantoin racemase AM341_RS12065 PF07715 TonB-dependent Receptor Plug Domain AM341_RS12065 PF00593 TonB dependent receptor AM341_RS12070 PF05958 tRNA (Uracil-5-)-methyltransferase AM341_RS12075 PF07226 Protein of unknown function (DUF1422) AM341_RS12080 PF00440 Bacterial regulatory proteins, tetR family AM341_RS12090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM341_RS12090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS12095 PF03466 LysR substrate binding domain AM341_RS12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS12100 PF14698 Argininosuccinate lyase C-terminal AM341_RS12100 PF00206 Lyase AM341_RS12105 PF00696 Amino acid kinase family AM341_RS12110 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM341_RS12110 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM341_RS12115 PF01546 Peptidase family M20/M25/M40 AM341_RS12115 PF07687 Peptidase dimerisation domain AM341_RS12125 PF00311 Phosphoenolpyruvate carboxylase AM341_RS12130 PF00884 Sulfatase AM341_RS12135 PF12833 Helix-turn-helix domain AM341_RS12140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS12145 PF04055 Radical SAM superfamily AM341_RS12150 PF01228 Glycine radical AM341_RS12150 PF02901 Pyruvate formate lyase-like AM341_RS12155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS12165 PF02896 PEP-utilising enzyme, TIM barrel domain AM341_RS12165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS12165 PF00391 PEP-utilising enzyme, mobile domain AM341_RS12165 PF00381 PTS HPr component phosphorylation site AM341_RS12165 PF05524 PEP-utilising enzyme, N-terminal AM341_RS12170 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM341_RS12175 PF00465 Iron-containing alcohol dehydrogenase AM341_RS12180 PF06940 Domain of unknown function (DUF1287) AM341_RS12185 PF00892 EamA-like transporter family AM341_RS12190 PF00141 Peroxidase AM341_RS12195 PF02219 Methylenetetrahydrofolate reductase AM341_RS12200 PF00696 Amino acid kinase family AM341_RS12200 PF03447 Homoserine dehydrogenase, NAD binding domain AM341_RS12200 PF00742 Homoserine dehydrogenase AM341_RS12205 PF01053 Cys/Met metabolism PLP-dependent enzyme AM341_RS12210 PF01340 Met Apo-repressor, MetJ AM341_RS12215 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM341_RS12220 PF01197 Ribosomal protein L31 AM341_RS12225 PF17764 3′ DNA-binding domain (3′BD) AM341_RS12225 PF18074 Primosomal protein N C-terminal domain AM341_RS12225 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM341_RS12225 PF00270 DEAD/DEAH box helicase AM341_RS12225 PF00271 Helicase conserved C-terminal domain AM341_RS12230 PF00356 Bacterial regulatory proteins, lacI family AM341_RS12235 PF05036 Sporulation related domain AM341_RS12240 PF00227 Proteasome subunit AM341_RS12245 PF10431 C-terminal, D2-small domain, of ClpB protein AM341_RS12245 PF00004 ATPase family associated with various cellular activities (AAA) AM341_RS12245 PF07724 AAA domain (Cdc48 subfamily) AM341_RS12250 PF01040 UbiA prenyltransferase family AM341_RS12255 PF03737 Aldolase/RraA AM341_RS12260 PF06005 Cell division protein ZapB AM341_RS12265 PF00230 Major intrinsic protein AM341_RS12270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS12270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS12275 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM341_RS12280 PF00175 Oxidoreductase NAD-binding domain AM341_RS12280 PF00970 Oxidoreductase FAD-binding domain AM341_RS12285 PF00582 Universal stress protein family AM341_RS12290 PF04175 Protein of unknown function (DUF406) AM341_RS12295 PF05656 Protein of unknown function (DUF805) AM341_RS12300 PF07305 Protein of unknown function (DUF1454) AM341_RS12305 PF00121 Triosephosphate isomerase AM341_RS12310 PF02611 CDP-diacylglycerol pyrophosphatase AM341_RS12320 PF00365 Phosphofructokinase AM341_RS12325 PF16916 Dimerisation domain of Zinc Transporter AM341_RS12325 PF01545 Cation efflux family AM341_RS12330 PF07813 LTXXQ motif family protein AM341_RS12335 PF00072 Response regulator receiver domain AM341_RS12335 PF00486 Transcriptional regulatory protein, C terminal AM341_RS12340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS12340 PF00672 HAMP domain AM341_RS12340 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS12340 PF16527 Two-component sensor protein CpxA, periplasmic domain AM341_RS12345 PF03473 MOSC domain AM341_RS12345 PF03475 3-alpha domain AM341_RS12350 PF03812 2-keto-3-deoxygluconate permease AM341_RS12360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM341_RS12360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM341_RS12365 PF06379 L-rhamnose-proton symport protein (RhaT) AM341_RS12370 PF02311 AraC-like ligand binding domain AM341_RS12370 PF12833 Helix-turn-helix domain AM341_RS12375 PF12833 Helix-turn-helix domain AM341_RS12375 PF02311 AraC-like ligand binding domain AM341_RS12380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS12380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS12385 PF06134 L-rhamnose isomerase (RhaA) AM341_RS12390 PF00596 Class II Aldolase and Adducin N-terminal domain AM341_RS12395 PF05336 L-rhamnose mutarotase AM341_RS12400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS12405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS12405 PF02378 Phosphotransferase system, EIIC AM341_RS12410 PF05343 M42 glutamyl aminopeptidase AM341_RS12415 PF08279 HTH domain AM341_RS12415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS12420 PF12889 Protein of unknown function (DUF3829) AM341_RS12425 PF02634 FdhD/NarQ family AM341_RS12435 PF01568 Molydopterin dinucleotide binding domain AM341_RS12435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM341_RS12435 PF00384 Molybdopterin oxidoreductase AM341_RS12440 PF01568 Molydopterin dinucleotide binding domain AM341_RS12440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM341_RS12440 PF00384 Molybdopterin oxidoreductase AM341_RS12445 PF09163 Formate dehydrogenase N, transmembrane AM341_RS12445 PF13247 4Fe-4S dicluster domain AM341_RS12450 PF01292 Prokaryotic cytochrome b561 AM341_RS12455 PF04216 Protein involved in formate dehydrogenase formation AM341_RS12465 PF01402 Ribbon-helix-helix protein, copG family AM341_RS12470 PF09500 Putative thioesterase (yiiD_Cterm) AM341_RS12470 PF00583 Acetyltransferase (GNAT) family AM341_RS12475 PF02580 D-Tyr-tRNA(Tyr) deacylase AM341_RS12480 PF03631 Virulence factor BrkB AM341_RS12485 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS12490 PF00455 DeoR C terminal sensor domain AM341_RS12490 PF08220 DeoR-like helix-turn-helix domain AM341_RS12495 PF00294 pfkB family carbohydrate kinase AM341_RS12500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM341_RS12500 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM341_RS12505 PF01791 DeoC/LacD family aldolase AM341_RS12515 PF01263 Aldose 1-epimerase AM341_RS12520 PF01055 Glycosyl hydrolases family 31 AM341_RS12535 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM341_RS12540 PF07690 Major Facilitator Superfamily AM341_RS12545 PF01261 Xylose isomerase-like TIM barrel AM341_RS12550 PF07702 UTRA domain AM341_RS12550 PF00392 Bacterial regulatory proteins, gntR family AM341_RS12555 PF00679 Elongation factor G C-terminus AM341_RS12555 PF00009 Elongation factor Tu GTP binding domain AM341_RS12555 PF03144 Elongation factor Tu domain 2 AM341_RS12565 PF00120 Glutamine synthetase, catalytic domain AM341_RS12565 PF03951 Glutamine synthetase, beta-Grasp domain AM341_RS12570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS12570 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS12570 PF00989 PAS fold AM341_RS12575 PF00158 Sigma-54 interaction domain AM341_RS12575 PF00072 Response regulator receiver domain AM341_RS12575 PF02954 Bacterial regulatory protein, Fis family AM341_RS12585 PF06969 HemN C-terminal domain AM341_RS12585 PF04055 Radical SAM superfamily AM341_RS12590 PF04220 Der GTPase activator (YihI) AM341_RS12600 PF01926 50S ribosome-binding GTPase AM341_RS12605 PF01367 5'-3' exonuclease, C-terminal SAM fold AM341_RS12605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM341_RS12605 PF00476 DNA polymerase family A AM341_RS12605 PF01612 3'-5' exonuclease AM341_RS12615 PF01553 Acyltransferase AM341_RS12620 PF06097 Bacterial protein of unknown function (DUF945) AM341_RS12625 PF01323 DSBA-like thioredoxin domain AM341_RS12630 PF01636 Phosphotransferase enzyme family AM341_RS12635 PF06288 Protein of unknown function (DUF1040) AM341_RS12640 PF12804 MobA-like NTP transferase domain AM341_RS12645 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM341_RS12675 PF12724 Flavodoxin domain AM341_RS12680 PF02386 Cation transport protein AM341_RS12685 PF01205 Uncharacterized protein family UPF0029 AM341_RS12685 PF09186 Domain of unknown function (DUF1949) AM341_RS12690 PF00557 Metallopeptidase family M24 AM341_RS12695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM341_RS12695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM341_RS12695 PF00378 Enoyl-CoA hydratase/isomerase AM341_RS12700 PF00108 Thiolase, N-terminal domain AM341_RS12700 PF02803 Thiolase, C-terminal domain AM341_RS12705 PF00175 Oxidoreductase NAD-binding domain AM341_RS12705 PF00970 Oxidoreductase FAD-binding domain AM341_RS12710 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM341_RS12715 PF02357 Transcription termination factor nusG AM341_RS12720 PF01026 TatD related DNase AM341_RS12725 PF00902 Sec-independent protein translocase protein (TatC) AM341_RS12735 PF02416 mttA/Hcf106 family AM341_RS12740 PF03109 ABC1 family AM341_RS12745 PF02036 SCP-2 sterol transfer family AM341_RS12750 PF01209 ubiE/COQ5 methyltransferase family AM341_RS12755 PF02646 RmuC family AM341_RS12760 PF01048 Phosphorylase superfamily AM341_RS12765 PF01738 Dienelactone hydrolase family AM341_RS12770 PF01717 Cobalamin-independent synthase, Catalytic domain AM341_RS12770 PF08267 Cobalamin-independent synthase, N-terminal domain AM341_RS12775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS12775 PF03466 LysR substrate binding domain AM341_RS12780 PF00892 EamA-like transporter family AM341_RS12790 PF12146 Serine aminopeptidase, S33 AM341_RS12795 PF01810 LysE type translocator AM341_RS12800 PF01810 LysE type translocator AM341_RS12805 PF16124 RecQ zinc-binding AM341_RS12805 PF00270 DEAD/DEAH box helicase AM341_RS12805 PF00271 Helicase conserved C-terminal domain AM341_RS12805 PF00570 HRDC domain AM341_RS12805 PF09382 RQC domain AM341_RS12810 PF02253 Phospholipase A1 AM341_RS12815 PF03061 Thioesterase superfamily AM341_RS12820 PF00892 EamA-like transporter family AM341_RS12830 PF10947 Protein of unknown function (DUF2628) AM341_RS12835 PF01544 CorA-like Mg2+ transporter protein AM341_RS12840 PF09992 Phosphodiester glycosidase AM341_RS12845 PF00580 UvrD/REP helicase N-terminal domain AM341_RS12845 PF13361 UvrD-like helicase C-terminal domain AM341_RS12850 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS12855 PF00589 Phage integrase family AM341_RS12855 PF02899 Phage integrase, N-terminal SAM-like domain AM341_RS12860 PF04340 Protein of unknown function, DUF484 AM341_RS12865 PF01678 Diaminopimelate epimerase AM341_RS12870 PF13627 Prokaryotic lipoprotein-attachment site AM341_RS12875 PF01491 Frataxin-like domain AM341_RS12880 PF01295 Adenylate cyclase, class-I AM341_RS12880 PF12633 Adenylate cyclase NT domain AM341_RS12890 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM341_RS12890 PF03900 Porphobilinogen deaminase, C-terminal domain AM341_RS12895 PF02602 Uroporphyrinogen-III synthase HemD AM341_RS12900 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM341_RS12905 PF07219 HemY protein N-terminus AM341_RS12905 PF07719 Tetratricopeptide repeat AM341_RS12910 PF00884 Sulfatase AM341_RS12915 PF13186 Iron-sulfur cluster-binding domain AM341_RS12915 PF04055 Radical SAM superfamily AM341_RS12940 PF00324 Amino acid permease AM341_RS12945 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM341_RS12950 PF06899 WzyE protein, O-antigen assembly polymerase AM341_RS12955 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AM341_RS12960 PF01943 Polysaccharide biosynthesis protein AM341_RS12965 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM341_RS12975 PF00483 Nucleotidyl transferase AM341_RS12980 PF16363 GDP-mannose 4,6 dehydratase AM341_RS12985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM341_RS12985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM341_RS12985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM341_RS12990 PF02350 UDP-N-acetylglucosamine 2-epimerase AM341_RS12995 PF02706 Chain length determinant protein AM341_RS13000 PF00953 Glycosyl transferase family 4 AM341_RS13010 PF07497 Rho termination factor, RNA-binding domain AM341_RS13010 PF07498 Rho termination factor, N-terminal domain AM341_RS13010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM341_RS13020 PF00085 Thioredoxin AM341_RS13025 PF00271 Helicase conserved C-terminal domain AM341_RS13025 PF00270 DEAD/DEAH box helicase AM341_RS13035 PF02541 Ppx/GppA phosphatase family AM341_RS13040 PF00580 UvrD/REP helicase N-terminal domain AM341_RS13040 PF13361 UvrD-like helicase C-terminal domain AM341_RS13055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM341_RS13055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM341_RS13060 PF03466 LysR substrate binding domain AM341_RS13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS13065 PF00291 Pyridoxal-phosphate dependent enzyme AM341_RS13065 PF00585 C-terminal regulatory domain of Threonine dehydratase AM341_RS13070 PF00920 Dehydratase family AM341_RS13075 PF01063 Amino-transferase class IV AM341_RS13085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM341_RS13085 PF00205 Thiamine pyrophosphate enzyme, central domain AM341_RS13085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM341_RS13090 PF08046 IlvGEDA operon leader peptide AM341_RS13100 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM341_RS13100 PF01078 Magnesium chelatase, subunit ChlI AM341_RS13105 PF04219 Protein of unknown function, DUF AM341_RS13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS13110 PF03466 LysR substrate binding domain AM341_RS13145 PF07729 FCD domain AM341_RS13145 PF00392 Bacterial regulatory proteins, gntR family AM341_RS13150 PF07690 Major Facilitator Superfamily AM341_RS13155 PF00356 Bacterial regulatory proteins, lacI family AM341_RS13160 PF00294 pfkB family carbohydrate kinase AM341_RS13165 PF13407 Periplasmic binding protein domain AM341_RS13170 PF02653 Branched-chain amino acid transport system / permease component AM341_RS13175 PF00005 ABC transporter AM341_RS13180 PF05025 RbsD / FucU transport protein family AM341_RS13185 PF02705 K+ potassium transporter AM341_RS13190 PF17868 AAA lid domain AM341_RS13190 PF07728 AAA domain (dynein-related subfamily) AM341_RS13190 PF12592 Protein of unknown function (DUF3763) AM341_RS13195 PF05762 VWA domain containing CoxE-like protein AM341_RS13200 PF03590 Aspartate-ammonia ligase AM341_RS13205 PF01037 Lrp/AsnC ligand binding domain AM341_RS13210 PF00258 Flavodoxin AM341_RS13215 PF13932 GidA associated domain AM341_RS13215 PF01134 Glucose inhibited division protein A AM341_RS13220 PF02527 rRNA small subunit methyltransferase G AM341_RS13225 PF03899 ATP synthase I chain AM341_RS13230 PF00119 ATP synthase A chain AM341_RS13235 PF00137 ATP synthase subunit C AM341_RS13240 PF00430 ATP synthase B/B' CF(0) AM341_RS13245 PF00213 ATP synthase delta (OSCP) subunit AM341_RS13250 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM341_RS13250 PF00306 ATP synthase alpha/beta chain, C terminal domain AM341_RS13250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM341_RS13255 PF00231 ATP synthase AM341_RS13260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM341_RS13260 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM341_RS13265 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM341_RS13265 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM341_RS13270 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS13270 PF14602 Hexapeptide repeat of succinyl-transferase AM341_RS13270 PF12804 MobA-like NTP transferase domain AM341_RS13275 PF01380 SIS domain AM341_RS13280 PF12849 PBP superfamily domain AM341_RS13285 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS13290 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS13295 PF00005 ABC transporter AM341_RS13300 PF01895 PhoU domain AM341_RS13305 PF00874 PRD domain AM341_RS13305 PF03123 CAT RNA binding domain AM341_RS13310 PF02378 Phosphotransferase system, EIIC AM341_RS13310 PF00367 phosphotransferase system, EIIB AM341_RS13310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM341_RS13315 PF00232 Glycosyl hydrolase family 1 AM341_RS13325 PF00756 Putative esterase AM341_RS13325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM341_RS13330 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM341_RS13335 PF03691 Uncharacterised protein family (UPF0167) AM341_RS13345 PF05717 IS66 Orf2 like protein AM341_RS13350 PF03050 Transposase IS66 family AM341_RS13350 PF13817 IS66 C-terminal element AM341_RS13350 PF13007 Transposase C of IS166 homeodomain AM341_RS13350 PF13005 zinc-finger binding domain of transposase IS66 AM341_RS13365 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS13370 PF00860 Permease family AM341_RS13375 PF03358 NADPH-dependent FMN reductase AM341_RS13385 PF03466 LysR substrate binding domain AM341_RS13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS13390 PF07690 Major Facilitator Superfamily AM341_RS13395 PF03222 Tryptophan/tyrosine permease family AM341_RS13400 PF01212 Beta-eliminating lyase AM341_RS13405 PF08053 Tryptophanase operon leader peptide AM341_RS13410 PF10396 GTP-binding protein TrmE N-terminus AM341_RS13410 PF01926 50S ribosome-binding GTPase AM341_RS13410 PF12631 MnmE helical domain AM341_RS13415 PF02096 60Kd inner membrane protein AM341_RS13415 PF14849 YidC periplasmic domain AM341_RS13420 PF01809 Putative membrane protein insertion efficiency factor AM341_RS13425 PF00825 Ribonuclease P AM341_RS13430 PF00468 Ribosomal protein L34 AM341_RS13440 PF11638 DnaA N-terminal domain AM341_RS13440 PF08299 Bacterial dnaA protein helix-turn-helix AM341_RS13440 PF00308 Bacterial dnaA protein AM341_RS13445 PF00712 DNA polymerase III beta subunit, N-terminal domain AM341_RS13445 PF02767 DNA polymerase III beta subunit, central domain AM341_RS13445 PF02768 DNA polymerase III beta subunit, C-terminal domain AM341_RS13450 PF02463 RecF/RecN/SMC N terminal domain AM341_RS13455 PF18053 DNA gyrase B subunit insert domain AM341_RS13455 PF00986 DNA gyrase B subunit, carboxyl terminus AM341_RS13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS13455 PF01751 Toprim domain AM341_RS13455 PF00204 DNA gyrase B AM341_RS13460 PF06078 Bacterial protein of unknown function (DUF937) AM341_RS13475 PF07729 FCD domain AM341_RS13475 PF00392 Bacterial regulatory proteins, gntR family AM341_RS13480 PF05035 2-keto-3-deoxy-galactonokinase AM341_RS13485 PF01081 KDPG and KHG aldolase AM341_RS13490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM341_RS13490 PF13378 Enolase C-terminal domain-like AM341_RS13495 PF07690 Major Facilitator Superfamily AM341_RS13500 PF01494 FAD binding domain AM341_RS13505 PF07676 WD40-like Beta Propeller Repeat AM341_RS13505 PF12566 Protein of unknown function (DUF3748) AM341_RS13510 PF07119 Protein of unknown function (DUF1375) AM341_RS13515 PF00011 Hsp20/alpha crystallin family AM341_RS13520 PF00011 Hsp20/alpha crystallin family AM341_RS13525 PF02080 TrkA-C domain AM341_RS13525 PF06826 Predicted Permease Membrane Region AM341_RS13530 PF07702 UTRA domain AM341_RS13530 PF00392 Bacterial regulatory proteins, gntR family AM341_RS13535 PF02378 Phosphotransferase system, EIIC AM341_RS13535 PF00367 phosphotransferase system, EIIB AM341_RS13545 PF12833 Helix-turn-helix domain AM341_RS13545 PF02311 AraC-like ligand binding domain AM341_RS13550 PF00474 Sodium:solute symporter family AM341_RS13555 PF00884 Sulfatase AM341_RS13555 PF16347 Domain of unknown function (DUF4976) AM341_RS13565 PF02656 Domain of unknown function (DUF202) AM341_RS13570 PF02656 Domain of unknown function (DUF202) AM341_RS13580 PF07690 Major Facilitator Superfamily AM341_RS13590 PF13939 Toxin TisB, type I toxin-antitoxin system AM341_RS13605 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM341_RS13605 PF13542 Helix-turn-helix domain of transposase family ISL3 AM341_RS13605 PF01610 Transposase AM341_RS13615 PF08049 IlvB leader peptide AM341_RS13620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM341_RS13620 PF00205 Thiamine pyrophosphate enzyme, central domain AM341_RS13620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM341_RS13625 PF01842 ACT domain AM341_RS13630 PF00072 Response regulator receiver domain AM341_RS13630 PF00196 Bacterial regulatory proteins, luxR family AM341_RS13635 PF07730 Histidine kinase AM341_RS13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS13635 PF05231 MASE1 AM341_RS13640 PF07690 Major Facilitator Superfamily AM341_RS13645 PF07690 Major Facilitator Superfamily AM341_RS13650 PF01979 Amidohydrolase family AM341_RS13650 PF13382 Adenine deaminase C-terminal domain AM341_RS13655 PF00860 Permease family AM341_RS13660 PF06711 Protein of unknown function (DUF1198) AM341_RS13670 PF07690 Major Facilitator Superfamily AM341_RS13685 PF03180 NLPA lipoprotein AM341_RS13690 PF00892 EamA-like transporter family AM341_RS13695 PF07690 Major Facilitator Superfamily AM341_RS13715 PF01055 Glycosyl hydrolases family 31 AM341_RS13715 PF13802 Galactose mutarotase-like AM341_RS13720 PF05170 AsmA family AM341_RS13725 PF00860 Permease family AM341_RS13730 PF03616 Sodium/glutamate symporter AM341_RS13735 PF17191 RecG wedge domain AM341_RS13735 PF00270 DEAD/DEAH box helicase AM341_RS13735 PF00271 Helicase conserved C-terminal domain AM341_RS13740 PF00588 SpoU rRNA Methylase family AM341_RS13740 PF12105 SpoU, rRNA methylase, C-terminal AM341_RS13745 PF02824 TGS domain AM341_RS13745 PF04607 Region found in RelA / SpoT proteins AM341_RS13745 PF13291 ACT domain AM341_RS13750 PF01192 RNA polymerase Rpb6 AM341_RS13755 PF00625 Guanylate kinase AM341_RS13760 PF01653 NAD-dependent DNA ligase adenylation domain AM341_RS13760 PF03120 NAD-dependent DNA ligase OB-fold domain AM341_RS13765 PF03458 UPF0126 domain AM341_RS13775 PF01610 Transposase AM341_RS13775 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM341_RS13775 PF13542 Helix-turn-helix domain of transposase family ISL3 AM341_RS13780 PF03755 YicC-like family, N-terminal region AM341_RS13780 PF08340 Domain of unknown function (DUF1732) AM341_RS13790 PF01138 3' exoribonuclease family, domain 1 AM341_RS13790 PF03725 3' exoribonuclease family, domain 2 AM341_RS13795 PF00156 Phosphoribosyl transferase domain AM341_RS13800 PF00440 Bacterial regulatory proteins, tetR family AM341_RS13805 PF00692 dUTPase AM341_RS13810 PF04127 DNA / pantothenate metabolism flavoprotein AM341_RS13810 PF02441 Flavoprotein AM341_RS13815 PF04002 RadC-like JAB domain AM341_RS13820 PF00830 Ribosomal L28 family AM341_RS13825 PF00471 Ribosomal protein L33 AM341_RS13830 PF06827 Zinc finger found in FPG and IleRS AM341_RS13830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM341_RS13830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM341_RS13835 PF01467 Cytidylyltransferase-like AM341_RS13840 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM341_RS13845 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM341_RS13850 PF00534 Glycosyl transferases group 1 AM341_RS13850 PF13439 Glycosyltransferase Family 4 AM341_RS13860 PF08437 Glycosyl transferase family 8 C-terminal AM341_RS13860 PF01501 Glycosyl transferase family 8 AM341_RS13865 PF00534 Glycosyl transferases group 1 AM341_RS13865 PF13439 Glycosyltransferase Family 4 AM341_RS13870 PF08437 Glycosyl transferase family 8 C-terminal AM341_RS13870 PF01501 Glycosyl transferase family 8 AM341_RS13875 PF01501 Glycosyl transferase family 8 AM341_RS13875 PF08437 Glycosyl transferase family 8 C-terminal AM341_RS13880 PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) AM341_RS13890 PF00534 Glycosyl transferases group 1 AM341_RS13895 PF04932 O-Antigen ligase AM341_RS13900 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM341_RS13905 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM341_RS13910 PF01370 NAD dependent epimerase/dehydratase family AM341_RS13915 PF00155 Aminotransferase class I and II AM341_RS13920 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS13920 PF00107 Zinc-binding dehydrogenase AM341_RS13925 PF00535 Glycosyl transferase family 2 AM341_RS13930 PF04748 Divergent polysaccharide deacetylase AM341_RS13935 PF01551 Peptidase family M23 AM341_RS13940 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM341_RS13940 PF01676 Metalloenzyme superfamily AM341_RS13950 PF00581 Rhodanese-like domain AM341_RS13955 PF00462 Glutaredoxin AM341_RS13960 PF02556 Preprotein translocase subunit SecB AM341_RS13965 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM341_RS13965 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM341_RS13970 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS13970 PF06426 Serine acetyltransferase, N-terminal AM341_RS13975 PF00588 SpoU rRNA Methylase family AM341_RS13980 PF01070 FMN-dependent dehydrogenase AM341_RS13985 PF07729 FCD domain AM341_RS13985 PF00392 Bacterial regulatory proteins, gntR family AM341_RS13990 PF02652 L-lactate permease AM341_RS14000 PF10928 Protein of unknown function (DUF2810) AM341_RS14010 PF05068 Mannitol repressor AM341_RS14015 PF01232 Mannitol dehydrogenase Rossmann domain AM341_RS14015 PF08125 Mannitol dehydrogenase C-terminal domain AM341_RS14020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS14020 PF02378 Phosphotransferase system, EIIC AM341_RS14020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS14025 PF11742 Protein of unknown function (DUF3302) AM341_RS14030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS14030 PF00529 HlyD membrane-fusion protein of T1SS AM341_RS14035 PF15596 Immunity protein 57 AM341_RS14075 PF03130 PBS lyase HEAT-like repeat AM341_RS14080 PF05593 RHS Repeat AM341_RS14080 PF15606 Bacterial toxin 34 AM341_RS14080 PF03527 RHS protein AM341_RS14085 PF13417 Glutathione S-transferase, N-terminal domain AM341_RS14085 PF00043 Glutathione S-transferase, C-terminal domain AM341_RS14090 PF12390 Selenocysteine synthase N terminal AM341_RS14090 PF03841 L-seryl-tRNA selenium transferase AM341_RS14095 PF09106 Elongation factor SelB, winged helix AM341_RS14095 PF09107 Elongation factor SelB, winged helix AM341_RS14095 PF03144 Elongation factor Tu domain 2 AM341_RS14095 PF00009 Elongation factor Tu GTP binding domain AM341_RS14100 PF00465 Iron-containing alcohol dehydrogenase AM341_RS14105 PF00171 Aldehyde dehydrogenase family AM341_RS14120 PF11742 Protein of unknown function (DUF3302) AM341_RS14125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS14125 PF00529 HlyD membrane-fusion protein of T1SS AM341_RS14130 PF03466 LysR substrate binding domain AM341_RS14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS14135 PF06629 MltA-interacting protein MipA AM341_RS14145 PF00596 Class II Aldolase and Adducin N-terminal domain AM341_RS14150 PF01261 Xylose isomerase-like TIM barrel AM341_RS14155 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM341_RS14160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS14160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS14165 PF03480 Bacterial extracellular solute-binding protein, family 7 AM341_RS14170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM341_RS14175 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AM341_RS14180 PF04074 YhcH/YjgK/YiaL AM341_RS14185 PF02615 Malate/L-lactate dehydrogenase AM341_RS14190 PF01614 Bacterial transcriptional regulator AM341_RS14190 PF09339 IclR helix-turn-helix domain AM341_RS14195 PF13247 4Fe-4S dicluster domain AM341_RS14200 PF00155 Aminotransferase class I and II AM341_RS14205 PF00128 Alpha amylase, catalytic domain AM341_RS14210 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM341_RS14215 PF12833 Helix-turn-helix domain AM341_RS14220 PF02653 Branched-chain amino acid transport system / permease component AM341_RS14225 PF00005 ABC transporter AM341_RS14230 PF13407 Periplasmic binding protein domain AM341_RS14240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS14240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS14245 PF05360 yiaA/B two helix domain AM341_RS14250 PF05360 yiaA/B two helix domain AM341_RS14255 PF01757 Acyltransferase family AM341_RS14260 PF13983 YsaB-like lipoprotein AM341_RS14265 PF02091 Glycyl-tRNA synthetase alpha subunit AM341_RS14270 PF02092 Glycyl-tRNA synthetase beta subunit AM341_RS14270 PF05746 DALR anticodon binding domain AM341_RS14280 PF01848 Hok/gef family AM341_RS14285 PF00313 'Cold-shock' DNA-binding domain AM341_RS14290 PF01381 Helix-turn-helix AM341_RS14295 PF11254 Protein of unknown function (DUF3053) AM341_RS14300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM341_RS14300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM341_RS14305 PF13488 Glycine zipper AM341_RS14305 PF00691 OmpA family AM341_RS14310 PF18364 Molybdopterin oxidoreductase N-terminal domain AM341_RS14310 PF01568 Molydopterin dinucleotide binding domain AM341_RS14310 PF00384 Molybdopterin oxidoreductase AM341_RS14315 PF00583 Acetyltransferase (GNAT) family AM341_RS14320 PF03352 Methyladenine glycosylase AM341_RS14325 PF03797 Autotransporter beta-domain AM341_RS14335 PF07690 Major Facilitator Superfamily AM341_RS14340 PF08019 Phosphoethanolamine transferase EptA/EptB AM341_RS14340 PF00884 Sulfatase AM341_RS14360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS14365 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS14370 PF12911 N-terminal TM domain of oligopeptide transport permease C AM341_RS14370 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS14375 PF00005 ABC transporter AM341_RS14375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM341_RS14380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM341_RS14380 PF00005 ABC transporter AM341_RS14385 PF03222 Tryptophan/tyrosine permease family AM341_RS14400 PF13940 Toxin Ldr, type I toxin-antitoxin system AM341_RS14405 PF11658 Cellulose biosynthesis protein BcsG AM341_RS14410 PF11120 Cellulose biosynthesis protein BcsF AM341_RS14415 PF10995 Cellulose biosynthesis GIL AM341_RS14420 PF10945 Cellulose biosynthesis protein BcsR AM341_RS14430 PF03552 Cellulose synthase AM341_RS14430 PF00535 Glycosyl transferase family 2 AM341_RS14430 PF07238 PilZ domain AM341_RS14435 PF03170 Bacterial cellulose synthase subunit AM341_RS14440 PF01270 Glycosyl hydrolases family 8 AM341_RS14445 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM341_RS14450 PF00672 HAMP domain AM341_RS14450 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS14450 PF17154 Gammaproteobacterial periplasmic sensor domain AM341_RS14450 PF00563 EAL domain AM341_RS14460 PF00375 Sodium:dicarboxylate symporter family AM341_RS14465 PF00675 Insulinase (Peptidase family M16) AM341_RS14465 PF05193 Peptidase M16 inactive domain AM341_RS14470 PF00294 pfkB family carbohydrate kinase AM341_RS14480 PF00563 EAL domain AM341_RS14485 PF05170 AsmA family AM341_RS14490 PF00083 Sugar (and other) transporter AM341_RS14490 PF07690 Major Facilitator Superfamily AM341_RS14495 PF03631 Virulence factor BrkB AM341_RS14500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS14500 PF03466 LysR substrate binding domain AM341_RS14505 PF00196 Bacterial regulatory proteins, luxR family AM341_RS14510 PF01204 Trehalase AM341_RS14515 PF00034 Cytochrome c AM341_RS14515 PF03150 Di-haem cytochrome c peroxidase AM341_RS14515 PF14376 Haem-binding domain AM341_RS14520 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM341_RS14525 PF12833 Helix-turn-helix domain AM341_RS14530 PF12833 Helix-turn-helix domain AM341_RS14540 PF00873 AcrB/AcrD/AcrF family AM341_RS14545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS14545 PF00529 HlyD membrane-fusion protein of T1SS AM341_RS14555 PF00196 Bacterial regulatory proteins, luxR family AM341_RS14560 PF03729 Short repeat of unknown function (DUF308) AM341_RS14565 PF06411 HdeA/HdeB family AM341_RS14570 PF06411 HdeA/HdeB family AM341_RS14575 PF02308 MgtC family AM341_RS14580 PF00196 Bacterial regulatory proteins, luxR family AM341_RS14590 PF03843 Outer membrane lipoprotein Slp family AM341_RS14600 PF03960 ArsC family AM341_RS14605 PF02040 Arsenical pump membrane protein AM341_RS14610 PF01022 Bacterial regulatory protein, arsR family AM341_RS14625 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS14625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM341_RS14630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM341_RS14635 PF01432 Peptidase family M3 AM341_RS14640 PF04445 Putative SAM-dependent methyltransferase AM341_RS14645 PF00854 POT family AM341_RS14655 PF00582 Universal stress protein family AM341_RS14660 PF10625 Universal stress protein B (UspB) AM341_RS14665 PF01384 Phosphate transporter family AM341_RS14675 PF10951 Protein of unknown function (DUF2776) AM341_RS14685 PF13258 Domain of unknown function (DUF4049) AM341_RS14690 PF13258 Domain of unknown function (DUF4049) AM341_RS14695 PF13533 Biotin-lipoyl like AM341_RS14700 PF00005 ABC transporter AM341_RS14710 PF13808 DDE_Tnp_1-associated AM341_RS14710 PF01609 Transposase DDE domain AM341_RS14715 PF03130 PBS lyase HEAT-like repeat AM341_RS14720 PF15631 NTF2 fold immunity protein AM341_RS14725 PF05593 RHS Repeat AM341_RS14725 PF03527 RHS protein AM341_RS14725 PF14220 Domain of unknown function (DUF4329) AM341_RS14730 PF01402 Ribbon-helix-helix protein, copG family AM341_RS14730 PF08753 NikR C terminal nickel binding domain AM341_RS14735 PF00005 ABC transporter AM341_RS14740 PF00005 ABC transporter AM341_RS14745 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS14750 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS14755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS14760 PF01648 4'-phosphopantetheinyl transferase superfamily AM341_RS14765 PF01594 AI-2E family transporter AM341_RS14770 PF07690 Major Facilitator Superfamily AM341_RS14775 PF08786 DcrB AM341_RS14780 PF02592 Putative vitamin uptake transporter AM341_RS14785 PF01206 Sulfurtransferase TusA AM341_RS14790 PF00403 Heavy-metal-associated domain AM341_RS14795 PF07947 YhhN family AM341_RS14800 PF10694 Protein of unknown function (DUF2500) AM341_RS14805 PF06611 Protein of unknown function (DUF1145) AM341_RS14815 PF02881 SRP54-type protein, helical bundle domain AM341_RS14815 PF00448 SRP54-type protein, GTPase domain AM341_RS14820 PF00005 ABC transporter AM341_RS14825 PF18075 FtsX extracellular domain AM341_RS14825 PF02687 FtsX-like permease family AM341_RS14830 PF04545 Sigma-70, region 4 AM341_RS14830 PF04542 Sigma-70 region 2 AM341_RS14835 PF13458 Periplasmic binding protein AM341_RS14840 PF12568 Acetyltransferase (GNAT) domain, PanZ AM341_RS14850 PF13458 Periplasmic binding protein AM341_RS14855 PF02653 Branched-chain amino acid transport system / permease component AM341_RS14860 PF02653 Branched-chain amino acid transport system / permease component AM341_RS14860 PF11862 Domain of unknown function (DUF3382) AM341_RS14865 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM341_RS14865 PF00005 ABC transporter AM341_RS14870 PF00005 ABC transporter AM341_RS14875 PF13416 Bacterial extracellular solute-binding protein AM341_RS14880 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS14885 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS14890 PF17912 MalK OB fold domain AM341_RS14890 PF00005 ABC transporter AM341_RS14895 PF03009 Glycerophosphoryl diester phosphodiesterase family AM341_RS14910 PF15567 Immunity protein 35 AM341_RS14925 PF05638 Type VI secretion system effector, Hcp AM341_RS14930 PF00583 Acetyltransferase (GNAT) family AM341_RS14940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM341_RS14940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM341_RS14945 PF17954 Quercetinase C-terminal cupin domain AM341_RS14945 PF02678 Pirin AM341_RS14950 PF00356 Bacterial regulatory proteins, lacI family AM341_RS14950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM341_RS14955 PF01202 Shikimate kinase AM341_RS14960 PF02447 GntP family permease AM341_RS14965 PF01914 MarC family integral membrane protein AM341_RS14970 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM341_RS14970 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM341_RS14975 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM341_RS14975 PF02806 Alpha amylase, C-terminal all-beta domain AM341_RS14975 PF00128 Alpha amylase, catalytic domain AM341_RS14980 PF18390 Glycogen debranching enzyme C-terminal domain AM341_RS14980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM341_RS14980 PF00128 Alpha amylase, catalytic domain AM341_RS14985 PF00483 Nucleotidyl transferase AM341_RS14990 PF00534 Glycosyl transferases group 1 AM341_RS14990 PF08323 Starch synthase catalytic domain AM341_RS14995 PF00343 Carbohydrate phosphorylase AM341_RS15005 PF01266 FAD dependent oxidoreductase AM341_RS15005 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM341_RS15010 PF00581 Rhodanese-like domain AM341_RS15015 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM341_RS15015 PF01694 Rhomboid family AM341_RS15020 PF00455 DeoR C terminal sensor domain AM341_RS15020 PF08220 DeoR-like helix-turn-helix domain AM341_RS15025 PF00158 Sigma-54 interaction domain AM341_RS15025 PF06956 Regulator of RNA terminal phosphate cyclase AM341_RS15030 PF01139 tRNA-splicing ligase RtcB AM341_RS15035 PF01137 RNA 3'-terminal phosphate cyclase AM341_RS15035 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AM341_RS15040 PF00196 Bacterial regulatory proteins, luxR family AM341_RS15040 PF17874 MalT-like TPR region AM341_RS15045 PF00343 Carbohydrate phosphorylase AM341_RS15050 PF02446 4-alpha-glucanotransferase AM341_RS15055 PF02447 GntP family permease AM341_RS15060 PF01106 NifU-like domain AM341_RS15060 PF01521 Iron-sulphur cluster biosynthesis AM341_RS15065 PF00156 Phosphoribosyl transferase domain AM341_RS15070 PF00561 alpha/beta hydrolase fold AM341_RS15075 PF04754 Putative transposase, YhgA-like AM341_RS15085 PF09012 FeoC like transcriptional regulator AM341_RS15090 PF17910 FeoB cytosolic helical domain AM341_RS15090 PF07664 Ferrous iron transport protein B C terminus AM341_RS15090 PF07670 Nucleoside recognition AM341_RS15090 PF02421 Ferrous iron transport protein B AM341_RS15095 PF04023 FeoA domain AM341_RS15105 PF00575 S1 RNA binding domain AM341_RS15105 PF17674 HHH domain AM341_RS15105 PF16921 Tex protein YqgF-like domain AM341_RS15105 PF09371 Tex-like protein N-terminal domain AM341_RS15110 PF01272 Transcription elongation factor, GreA/GreB, C-term AM341_RS15110 PF03449 Transcription elongation factor, N-terminal AM341_RS15120 PF00072 Response regulator receiver domain AM341_RS15120 PF00486 Transcriptional regulatory protein, C terminal AM341_RS15125 PF00672 HAMP domain AM341_RS15125 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS15125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS15130 PF01293 Phosphoenolpyruvate carboxykinase AM341_RS15140 PF13687 Domain of unknown function (DUF4153) AM341_RS15145 PF01430 Hsp33 protein AM341_RS15150 PF01479 S4 domain AM341_RS15155 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS15160 PF07095 Intracellular growth attenuator protein IgaA AM341_RS15165 PF00293 NUDIX domain AM341_RS15170 PF17092 Penicillin-binding protein OB-like domain AM341_RS15170 PF00912 Transglycosylase AM341_RS15170 PF00905 Penicillin binding protein transpeptidase domain AM341_RS15180 PF05137 Fimbrial assembly protein (PilN) AM341_RS15190 PF10748 DNA utilization proteins HofP AM341_RS15195 PF03958 Bacterial type II/III secretion system short domain AM341_RS15195 PF00263 Bacterial type II and III secretion system protein AM341_RS15200 PF01202 Shikimate kinase AM341_RS15205 PF01761 3-dehydroquinate synthase AM341_RS15210 PF05036 Sporulation related domain AM341_RS15215 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM341_RS15220 PF00834 Ribulose-phosphate 3 epimerase family AM341_RS15225 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS15230 PF00579 tRNA synthetases class I (W and Y) AM341_RS15240 PF14502 Helix-turn-helix domain AM341_RS15240 PF14503 YhfZ C-terminal domain AM341_RS15250 PF01168 Alanine racemase, N-terminal domain AM341_RS15255 PF01676 Metalloenzyme superfamily AM341_RS15260 PF02126 Phosphotriesterase family AM341_RS15265 PF10941 Protein of unknown function DUF2620 AM341_RS15270 PF10797 Protein of unknown function AM341_RS15275 PF00155 Aminotransferase class I and II AM341_RS15280 PF07702 UTRA domain AM341_RS15280 PF00392 Bacterial regulatory proteins, gntR family AM341_RS15285 PF00294 pfkB family carbohydrate kinase AM341_RS15290 PF01261 Xylose isomerase-like TIM barrel AM341_RS15300 PF01380 SIS domain AM341_RS15305 PF13520 Amino acid permease AM341_RS15310 PF13978 Protein of unknown function (DUF4223) AM341_RS15315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM341_RS15315 PF14824 Sirohaem biosynthesis protein central AM341_RS15315 PF10414 Sirohaem synthase dimerisation region AM341_RS15320 PF01226 Formate/nitrite transporter AM341_RS15325 PF13806 Rieske-like [2Fe-2S] domain AM341_RS15330 PF04324 BFD-like [2Fe-2S] binding domain AM341_RS15330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM341_RS15330 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS15330 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM341_RS15330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM341_RS15335 PF07690 Major Facilitator Superfamily AM341_RS15340 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM341_RS15345 PF10832 Protein of unknown function (DUF2559) AM341_RS15350 PF02661 Fic/DOC family AM341_RS15355 PF00117 Glutamine amidotransferase class-I AM341_RS15360 PF00202 Aminotransferase class-III AM341_RS15365 PF12805 FUSC-like inner membrane protein yccS AM341_RS15370 PF13545 Crp-like helix-turn-helix domain AM341_RS15370 PF00027 Cyclic nucleotide-binding domain AM341_RS15380 PF02566 OsmC-like protein AM341_RS15385 PF00485 Phosphoribulokinase / Uridine kinase family AM341_RS15390 PF06794 Uncharacterised protein family (UPF0270) AM341_RS15395 PF00561 alpha/beta hydrolase fold AM341_RS15400 PF00005 ABC transporter AM341_RS15400 PF12848 ABC transporter AM341_RS15410 PF02525 Flavodoxin-like fold AM341_RS15415 PF02254 TrkA-N domain AM341_RS15415 PF00999 Sodium/hydrogen exchanger family AM341_RS15420 PF09526 Probable metal-binding protein (DUF2387) AM341_RS15425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM341_RS15430 PF04102 SlyX AM341_RS15435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM341_RS15435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM341_RS15440 PF13309 HTH domain AM341_RS15440 PF08348 YheO-like PAS domain AM341_RS15445 PF02635 DsrE/DsrF-like family AM341_RS15450 PF02635 DsrE/DsrF-like family AM341_RS15455 PF04077 DsrH like protein AM341_RS15460 PF00164 Ribosomal protein S12/S23 AM341_RS15465 PF00177 Ribosomal protein S7p/S5e AM341_RS15470 PF03764 Elongation factor G, domain IV AM341_RS15470 PF00009 Elongation factor Tu GTP binding domain AM341_RS15470 PF03144 Elongation factor Tu domain 2 AM341_RS15470 PF00679 Elongation factor G C-terminus AM341_RS15470 PF14492 Elongation Factor G, domain II AM341_RS15475 PF00009 Elongation factor Tu GTP binding domain AM341_RS15475 PF03143 Elongation factor Tu C-terminal domain AM341_RS15475 PF03144 Elongation factor Tu domain 2 AM341_RS15485 PF02839 Carbohydrate binding domain AM341_RS15490 PF04324 BFD-like [2Fe-2S] binding domain AM341_RS15495 PF00210 Ferritin-like domain AM341_RS15500 PF01478 Type IV leader peptidase family AM341_RS15505 PF04612 Type II secretion system (T2SS), protein M AM341_RS15510 PF12693 GspL periplasmic domain AM341_RS15510 PF05134 Type II secretion system (T2SS), protein L AM341_RS15520 PF11612 Type II secretion system (T2SS), protein J AM341_RS15520 PF07963 Prokaryotic N-terminal methylation motif AM341_RS15525 PF07963 Prokaryotic N-terminal methylation motif AM341_RS15525 PF02501 Type II secretion system (T2SS), protein I AM341_RS15530 PF07963 Prokaryotic N-terminal methylation motif AM341_RS15530 PF12019 Type II transport protein GspH AM341_RS15535 PF07963 Prokaryotic N-terminal methylation motif AM341_RS15535 PF08334 Type II secretion system (T2SS), protein G AM341_RS15540 PF00482 Type II secretion system (T2SS), protein F AM341_RS15545 PF00437 Type II/IV secretion system protein AM341_RS15550 PF03958 Bacterial type II/III secretion system short domain AM341_RS15550 PF00263 Bacterial type II and III secretion system protein AM341_RS15555 PF11356 Type II secretion system protein C AM341_RS15560 PF01471 Putative peptidoglycan binding domain AM341_RS15560 PF13401 AAA domain AM341_RS15575 PF00338 Ribosomal protein S10p/S20e AM341_RS15580 PF00297 Ribosomal protein L3 AM341_RS15585 PF00573 Ribosomal protein L4/L1 family AM341_RS15590 PF00276 Ribosomal protein L23 AM341_RS15595 PF00181 Ribosomal Proteins L2, RNA binding domain AM341_RS15595 PF03947 Ribosomal Proteins L2, C-terminal domain AM341_RS15600 PF00203 Ribosomal protein S19 AM341_RS15605 PF00237 Ribosomal protein L22p/L17e AM341_RS15610 PF00189 Ribosomal protein S3, C-terminal domain AM341_RS15610 PF07650 KH domain AM341_RS15615 PF00252 Ribosomal protein L16p/L10e AM341_RS15620 PF00831 Ribosomal L29 protein AM341_RS15625 PF00366 Ribosomal protein S17 AM341_RS15630 PF00238 Ribosomal protein L14p/L23e AM341_RS15635 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM341_RS15635 PF00467 KOW motif AM341_RS15640 PF00673 ribosomal L5P family C-terminus AM341_RS15640 PF00281 Ribosomal protein L5 AM341_RS15645 PF00253 Ribosomal protein S14p/S29e AM341_RS15650 PF00410 Ribosomal protein S8 AM341_RS15655 PF00347 Ribosomal protein L6 AM341_RS15660 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM341_RS15665 PF03719 Ribosomal protein S5, C-terminal domain AM341_RS15665 PF00333 Ribosomal protein S5, N-terminal domain AM341_RS15670 PF00327 Ribosomal protein L30p/L7e AM341_RS15675 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM341_RS15680 PF00344 SecY translocase AM341_RS15685 PF00444 Ribosomal protein L36 AM341_RS15690 PF00416 Ribosomal protein S13/S18 AM341_RS15695 PF00411 Ribosomal protein S11 AM341_RS15700 PF00163 Ribosomal protein S4/S9 N-terminal domain AM341_RS15700 PF01479 S4 domain AM341_RS15705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM341_RS15705 PF01000 RNA polymerase Rpb3/RpoA insert domain AM341_RS15705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM341_RS15710 PF01196 Ribosomal protein L17 AM341_RS15715 PF09350 Domain of unknown function (DUF1992) AM341_RS15720 PF13411 MerR HTH family regulatory protein AM341_RS15725 PF03889 Alternative ribosome-rescue factor A AM341_RS15730 PF01741 Large-conductance mechanosensitive channel, MscL AM341_RS15735 PF02254 TrkA-N domain AM341_RS15735 PF02080 TrkA-C domain AM341_RS15740 PF01189 16S rRNA methyltransferase RsmB/F AM341_RS15740 PF01029 NusB family AM341_RS15745 PF00551 Formyl transferase AM341_RS15745 PF02911 Formyl transferase, C-terminal domain AM341_RS15750 PF01327 Polypeptide deformylase AM341_RS15755 PF17782 DprA winged helix domain AM341_RS15755 PF02481 DNA recombination-mediator protein A AM341_RS15760 PF04361 Protein of unknown function (DUF494) AM341_RS15765 PF01396 Topoisomerase DNA binding C4 zinc finger AM341_RS15770 PF01300 Telomere recombination AM341_RS15775 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM341_RS15775 PF08501 Shikimate dehydrogenase substrate binding domain AM341_RS15775 PF01488 Shikimate / quinate 5-dehydrogenase AM341_RS15780 PF07369 Protein of unknown function (DUF1488) AM341_RS15785 PF00132 Bacterial transferase hexapeptide (six repeats) AM341_RS15825 PF00005 ABC transporter AM341_RS15830 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS15835 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS15840 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS15860 PF00873 AcrB/AcrD/AcrF family AM341_RS15870 PF13737 Transposase DDE domain AM341_RS15875 PF01555 DNA methylase AM341_RS15880 PF02954 Bacterial regulatory protein, Fis family AM341_RS15885 PF01207 Dihydrouridine synthase (Dus) AM341_RS15895 PF00474 Sodium:solute symporter family AM341_RS15900 PF06196 Protein of unknown function (DUF997) AM341_RS15905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM341_RS15905 PF00289 Biotin carboxylase, N-terminal domain AM341_RS15905 PF02785 Biotin carboxylase C-terminal domain AM341_RS15910 PF00364 Biotin-requiring enzyme AM341_RS15920 PF00107 Zinc-binding dehydrogenase AM341_RS15920 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS15925 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS15925 PF17157 Gammaproteobacterial periplasmic sensor domain AM341_RS15925 PF00563 EAL domain AM341_RS15945 PF04085 rod shape-determining protein MreC AM341_RS15950 PF04093 rod shape-determining protein MreD AM341_RS15955 PF02545 Maf-like protein AM341_RS15960 PF00575 S1 RNA binding domain AM341_RS15960 PF10150 Ribonuclease E/G family AM341_RS15965 PF13502 AsmA-like C-terminal region AM341_RS15965 PF13116 Protein of unknown function AM341_RS15970 PF01523 Putative modulator of DNA gyrase AM341_RS15975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS15975 PF03466 LysR substrate binding domain AM341_RS15980 PF07869 Protein of unknown function (DUF1656) AM341_RS15985 PF13533 Biotin-lipoyl like AM341_RS15990 PF04632 Fusaric acid resistance protein family AM341_RS15995 PF01337 Barstar (barnase inhibitor) AM341_RS16000 PF07338 Protein of unknown function (DUF1471) AM341_RS16005 PF01316 Arginine repressor, DNA binding domain AM341_RS16005 PF02863 Arginine repressor, C-terminal domain AM341_RS16010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM341_RS16010 PF00056 lactate/malate dehydrogenase, NAD binding domain AM341_RS16015 PF13180 PDZ domain AM341_RS16020 PF13180 PDZ domain AM341_RS16020 PF00595 PDZ domain AM341_RS16025 PF06295 Protein of unknown function (DUF1043) AM341_RS16030 PF03969 AFG1-like ATPase AM341_RS16035 PF00572 Ribosomal protein L13 AM341_RS16040 PF00380 Ribosomal protein S9/S16 AM341_RS16050 PF00043 Glutathione S-transferase, C-terminal domain AM341_RS16050 PF02798 Glutathione S-transferase, N-terminal domain AM341_RS16055 PF04386 Stringent starvation protein B AM341_RS16060 PF03606 C4-dicarboxylate anaerobic carrier AM341_RS16070 PF00392 Bacterial regulatory proteins, gntR family AM341_RS16070 PF07729 FCD domain AM341_RS16075 PF00701 Dihydrodipicolinate synthetase family AM341_RS16080 PF07690 Major Facilitator Superfamily AM341_RS16085 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM341_RS16090 PF00480 ROK family AM341_RS16095 PF04074 YhcH/YjgK/YiaL AM341_RS16100 PF06250 YhcG PDDEXK nuclease domain AM341_RS16100 PF17761 DUF1016 N-terminal domain AM341_RS16115 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM341_RS16130 PF06551 Protein of unknown function (DUF1120) AM341_RS16140 PF00577 Outer membrane usher protein AM341_RS16140 PF13954 PapC N-terminal domain AM341_RS16140 PF13953 PapC C-terminal domain AM341_RS16145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS16150 PF06551 Protein of unknown function (DUF1120) AM341_RS16160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS16160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM341_RS16165 PF04898 Glutamate synthase central domain AM341_RS16165 PF00310 Glutamine amidotransferases class-II AM341_RS16165 PF01493 GXGXG motif AM341_RS16165 PF01645 Conserved region in glutamate synthase AM341_RS16180 PF04055 Radical SAM superfamily AM341_RS16180 PF16199 Radical_SAM C-terminal domain AM341_RS16185 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS16185 PF18415 Histidine kinase receptor ArcB trans-membrane domain AM341_RS16185 PF00989 PAS fold AM341_RS16185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS16185 PF01627 Hpt domain AM341_RS16185 PF00072 Response regulator receiver domain AM341_RS16195 PF00912 Transglycosylase AM341_RS16200 PF10707 PhoP regulatory network protein YrbL AM341_RS16205 PF00381 PTS HPr component phosphorylation site AM341_RS16210 PF03668 P-loop ATPase protein family AM341_RS16215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS16220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM341_RS16225 PF04963 Sigma-54 factor, core binding domain AM341_RS16225 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM341_RS16225 PF04552 Sigma-54, DNA binding domain AM341_RS16230 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM341_RS16230 PF00005 ABC transporter AM341_RS16235 PF03968 OstA-like protein AM341_RS16240 PF06835 Lipopolysaccharide-assembly, LptC-related AM341_RS16250 PF01380 SIS domain AM341_RS16250 PF00571 CBS domain AM341_RS16255 PF01699 Sodium/calcium exchanger protein AM341_RS16260 PF00005 ABC transporter AM341_RS16265 PF02405 Permease MlaE AM341_RS16270 PF02470 MlaD protein AM341_RS16275 PF05494 MlaC protein AM341_RS16280 PF13466 STAS domain AM341_RS16285 PF01722 BolA-like protein AM341_RS16290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM341_RS16295 PF13693 Winged helix-turn-helix DNA-binding AM341_RS16300 PF00348 Polyprenyl synthetase AM341_RS16305 PF00829 Ribosomal prokaryotic L21 protein AM341_RS16310 PF01016 Ribosomal L27 protein AM341_RS16315 PF00892 EamA-like transporter family AM341_RS16320 PF01926 50S ribosome-binding GTPase AM341_RS16320 PF01018 GTP1/OBG AM341_RS16325 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM341_RS16330 PF01272 Transcription elongation factor, GreA/GreB, C-term AM341_RS16330 PF03449 Transcription elongation factor, N-terminal AM341_RS16335 PF01985 CRS1 / YhbY (CRM) domain AM341_RS16340 PF01728 FtsJ-like methyltransferase AM341_RS16345 PF17862 AAA+ lid domain AM341_RS16345 PF00004 ATPase family associated with various cellular activities (AAA) AM341_RS16345 PF01434 Peptidase family M41 AM341_RS16345 PF06480 FtsH Extracellular AM341_RS16350 PF00809 Pterin binding enzyme AM341_RS16355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM341_RS16355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM341_RS16355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM341_RS16355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM341_RS16360 PF03840 Preprotein translocase SecG subunit AM341_RS16370 PF00884 Sulfatase AM341_RS16375 PF00764 Arginosuccinate synthase AM341_RS16385 PF17384 RimP C-terminal SH3 domain AM341_RS16385 PF02576 RimP N-terminal domain AM341_RS16390 PF13184 NusA-like KH domain AM341_RS16390 PF00575 S1 RNA binding domain AM341_RS16390 PF08529 NusA N-terminal domain AM341_RS16395 PF00009 Elongation factor Tu GTP binding domain AM341_RS16395 PF08364 Bacterial translation initiation factor IF-2 associated region AM341_RS16395 PF11987 Translation-initiation factor 2 AM341_RS16395 PF04760 Translation initiation factor IF-2, N-terminal region AM341_RS16400 PF02033 Ribosome-binding factor A AM341_RS16405 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM341_RS16405 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM341_RS16405 PF09157 Pseudouridine synthase II TruB, C-terminal AM341_RS16410 PF00312 Ribosomal protein S15 AM341_RS16415 PF00575 S1 RNA binding domain AM341_RS16415 PF03725 3' exoribonuclease family, domain 2 AM341_RS16415 PF01138 3' exoribonuclease family, domain 1 AM341_RS16415 PF00013 KH domain AM341_RS16415 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM341_RS16420 PF13181 Tetratricopeptide repeat AM341_RS16420 PF07719 Tetratricopeptide repeat AM341_RS16430 PF12343 Cold shock protein DEAD box A AM341_RS16430 PF00270 DEAD/DEAH box helicase AM341_RS16430 PF00271 Helicase conserved C-terminal domain AM341_RS16430 PF03880 DbpA RNA binding domain AM341_RS16435 PF03222 Tryptophan/tyrosine permease family AM341_RS16440 PF00296 Luciferase-like monooxygenase AM341_RS16445 PF01136 Peptidase family U32 AM341_RS16450 PF01136 Peptidase family U32 AM341_RS16455 PF02036 SCP-2 sterol transfer family AM341_RS16460 PF13508 Acetyltransferase (GNAT) domain AM341_RS16465 PF01541 GIY-YIG catalytic domain AM341_RS16475 PF01965 DJ-1/PfpI family AM341_RS16480 PF13460 NAD(P)H-binding AM341_RS16485 PF03773 Predicted permease AM341_RS16490 PF04972 BON domain AM341_RS16495 PF13580 SIS domain AM341_RS16500 PF02021 Uncharacterised protein family UPF0102 AM341_RS16505 PF04348 LppC putative lipoprotein AM341_RS16510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM341_RS16515 PF00419 Fimbrial protein AM341_RS16520 PF13953 PapC C-terminal domain AM341_RS16520 PF13954 PapC N-terminal domain AM341_RS16520 PF00577 Outer membrane usher protein AM341_RS16525 PF02753 Pili assembly chaperone PapD, C-terminal domain AM341_RS16525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS16530 PF00419 Fimbrial protein AM341_RS16535 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM341_RS16540 PF03613 PTS system mannose/fructose/sorbose family IID component AM341_RS16545 PF03609 PTS system sorbose-specific iic component AM341_RS16560 PF03830 PTS system sorbose subfamily IIB component AM341_RS16565 PF01116 Fructose-bisphosphate aldolase class-II AM341_RS16570 PF01380 SIS domain AM341_RS16575 PF01979 Amidohydrolase family AM341_RS16580 PF03610 PTS system fructose IIA component AM341_RS16585 PF03613 PTS system mannose/fructose/sorbose family IID component AM341_RS16590 PF03609 PTS system sorbose-specific iic component AM341_RS16595 PF03830 PTS system sorbose subfamily IIB component AM341_RS16600 PF08013 Tagatose 6 phosphate kinase AM341_RS16610 PF00455 DeoR C terminal sensor domain AM341_RS16610 PF08220 DeoR-like helix-turn-helix domain AM341_RS16615 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system AM341_RS16620 PF15937 prlF antitoxin for toxin YhaV_toxin AM341_RS16625 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM341_RS16625 PF08666 SAF domain AM341_RS16630 PF07690 Major Facilitator Superfamily AM341_RS16635 PF03328 HpcH/HpaI aldolase/citrate lyase family AM341_RS16640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM341_RS16640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM341_RS16645 PF02595 Glycerate kinase family AM341_RS16670 PF03466 LysR substrate binding domain AM341_RS16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS16680 PF00291 Pyridoxal-phosphate dependent enzyme AM341_RS16685 PF03222 Tryptophan/tyrosine permease family AM341_RS16690 PF00871 Acetokinase family AM341_RS16695 PF01228 Glycine radical AM341_RS16695 PF02901 Pyruvate formate lyase-like AM341_RS16700 PF01042 Endoribonuclease L-PSP AM341_RS16705 PF03313 Serine dehydratase alpha chain AM341_RS16705 PF03315 Serine dehydratase beta chain AM341_RS16720 PF03313 Serine dehydratase alpha chain AM341_RS16730 PF02678 Pirin AM341_RS16730 PF17954 Quercetinase C-terminal cupin domain AM341_RS16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS16735 PF03466 LysR substrate binding domain AM341_RS16745 PF05656 Protein of unknown function (DUF805) AM341_RS16765 PF05656 Protein of unknown function (DUF805) AM341_RS16770 PF13409 Glutathione S-transferase, N-terminal domain AM341_RS16775 PF07681 DoxX AM341_RS16780 PF13997 YqjK-like protein AM341_RS16785 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AM341_RS16790 PF05957 Bacterial protein of unknown function (DUF883) AM341_RS16795 PF06476 Protein of unknown function (DUF1090) AM341_RS16800 PF13721 SecD export protein N-terminal TM region AM341_RS16805 PF09335 SNARE associated Golgi protein AM341_RS16810 PF00392 Bacterial regulatory proteins, gntR family AM341_RS16810 PF07729 FCD domain AM341_RS16815 PF07690 Major Facilitator Superfamily AM341_RS16820 PF02614 Glucuronate isomerase AM341_RS16825 PF08666 SAF domain AM341_RS16825 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM341_RS16830 PF10688 Bacterial inner membrane protein AM341_RS16835 PF00375 Sodium:dicarboxylate symporter family AM341_RS16840 PF03741 Integral membrane protein TerC family AM341_RS16845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM341_RS16850 PF02698 DUF218 domain AM341_RS16855 PF01863 Protein of unknown function DUF45 AM341_RS16860 PF05175 Methyltransferase small domain AM341_RS16870 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AM341_RS16875 PF01381 Helix-turn-helix AM341_RS16880 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS16880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM341_RS16885 PF01204 Trehalase AM341_RS16895 PF13520 Amino acid permease AM341_RS16900 PF04074 YhcH/YjgK/YiaL AM341_RS16905 PF00703 Glycosyl hydrolases family 2 AM341_RS16905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM341_RS16905 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM341_RS16905 PF02929 Beta galactosidase small chain AM341_RS16905 PF16353 Domain of unknown function(DUF4981) AM341_RS16910 PF00356 Bacterial regulatory proteins, lacI family AM341_RS16920 PF01588 Putative tRNA binding domain AM341_RS16925 PF00202 Aminotransferase class-III AM341_RS16935 PF08447 PAS fold AM341_RS16935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM341_RS16940 PF03551 Transcriptional regulator PadR-like family AM341_RS16945 PF04954 Siderophore-interacting protein AM341_RS16945 PF08021 Siderophore-interacting FAD-binding domain AM341_RS16955 PF03167 Uracil DNA glycosylase superfamily AM341_RS16960 PF04542 Sigma-70 region 2 AM341_RS16960 PF00140 Sigma-70 factor, region 1.2 AM341_RS16960 PF03979 Sigma-70 factor, region 1.1 AM341_RS16960 PF04546 Sigma-70, non-essential region AM341_RS16960 PF04539 Sigma-70 region 3 AM341_RS16960 PF04545 Sigma-70, region 4 AM341_RS16970 PF10410 DnaB-helicase binding domain of primase AM341_RS16970 PF01807 CHC2 zinc finger AM341_RS16970 PF08275 DNA primase catalytic core, N-terminal domain AM341_RS16970 PF08278 DNA primase DnaG DnaB-binding AM341_RS16975 PF01165 Ribosomal protein S21 AM341_RS16985 PF00814 Glycoprotease family AM341_RS16990 PF00939 Sodium:sulfate symporter transmembrane region AM341_RS16995 PF05683 Fumarase C-terminus AM341_RS17000 PF05681 Fumarate hydratase (Fumerase) AM341_RS17010 PF03466 LysR substrate binding domain AM341_RS17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS17015 PF02660 Glycerol-3-phosphate acyltransferase AM341_RS17020 PF02152 Dihydroneopterin aldolase AM341_RS17025 PF02673 Bacitracin resistance protein BacA AM341_RS17030 PF01743 Poly A polymerase head domain AM341_RS17030 PF01966 HD domain AM341_RS17030 PF12627 Probable RNA and SrmB- binding site of polymerase A AM341_RS17035 PF08239 Bacterial SH3 domain AM341_RS17045 PF01928 CYTH domain AM341_RS17050 PF08335 GlnD PII-uridylyltransferase AM341_RS17050 PF03710 Glutamate-ammonia ligase adenylyltransferase AM341_RS17055 PF00294 pfkB family carbohydrate kinase AM341_RS17055 PF01467 Cytidylyltransferase-like AM341_RS17070 PF15975 Flotillin AM341_RS17070 PF01145 SPFH domain / Band 7 family AM341_RS17075 PF07290 Protein of unknown function (DUF1449) AM341_RS17080 PF08971 Glycogen synthesis protein AM341_RS17090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS17090 PF02753 Pili assembly chaperone PapD, C-terminal domain AM341_RS17095 PF00577 Outer membrane usher protein AM341_RS17095 PF13954 PapC N-terminal domain AM341_RS17095 PF13953 PapC C-terminal domain AM341_RS17100 PF00419 Fimbrial protein AM341_RS17105 PF04380 Membrane fusogenic activity AM341_RS17110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM341_RS17120 PF02535 ZIP Zinc transporter AM341_RS17125 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM341_RS17130 PF03738 Glutathionylspermidine synthase preATP-grasp AM341_RS17135 PF06693 Protein of unknown function (DUF1190) AM341_RS17145 PF02321 Outer membrane efflux protein AM341_RS17150 PF00293 NUDIX domain AM341_RS17155 PF06853 Protein of unknown function (DUF1249) AM341_RS17160 PF00149 Calcineurin-like phosphoesterase AM341_RS17165 PF05728 Uncharacterised protein family (UPF0227) AM341_RS17170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS17170 PF00986 DNA gyrase B subunit, carboxyl terminus AM341_RS17170 PF00204 DNA gyrase B AM341_RS17170 PF01751 Toprim domain AM341_RS17175 PF03992 Antibiotic biosynthesis monooxygenase AM341_RS17180 PF02525 Flavodoxin-like fold AM341_RS17190 PF10840 Protein of unknown function (DUF2645) AM341_RS17195 PF08521 Two-component sensor kinase N-terminal AM341_RS17195 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS17195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS17200 PF00486 Transcriptional regulatory protein, C terminal AM341_RS17200 PF00072 Response regulator receiver domain AM341_RS17205 PF04076 Bacterial OB fold (BOF) protein AM341_RS17210 PF06445 GyrI-like small molecule binding domain AM341_RS17215 PF15723 Motility quorum-sensing regulator, toxin of MqsA AM341_RS17220 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AM341_RS17225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS17230 PF03989 DNA gyrase C-terminal domain, beta-propeller AM341_RS17230 PF00521 DNA gyrase/topoisomerase IV, subunit A AM341_RS17235 PF01553 Acyltransferase AM341_RS17240 PF07732 Multicopper oxidase AM341_RS17240 PF07731 Multicopper oxidase AM341_RS17240 PF00394 Multicopper oxidase AM341_RS17245 PF11842 Domain of unknown function (DUF3362) AM341_RS17245 PF08497 Radical SAM N-terminal AM341_RS17245 PF04055 Radical SAM superfamily AM341_RS17250 PF04728 Lipoprotein leucine-zipper AM341_RS17255 PF12883 Protein of unknown function (DUF3828) AM341_RS17260 PF00248 Aldo/keto reductase family AM341_RS17265 PF00465 Iron-containing alcohol dehydrogenase AM341_RS17270 PF06719 AraC-type transcriptional regulator N-terminus AM341_RS17270 PF12833 Helix-turn-helix domain AM341_RS17275 PF09335 SNARE associated Golgi protein AM341_RS17280 PF01053 Cys/Met metabolism PLP-dependent enzyme AM341_RS17290 PF01618 MotA/TolQ/ExbB proton channel family AM341_RS17295 PF02472 Biopolymer transport protein ExbD/TolR AM341_RS17305 PF03350 Uncharacterized protein family, UPF0114 AM341_RS17310 PF00248 Aldo/keto reductase family AM341_RS17325 PF11115 Protein of unknown function (DUF2623) AM341_RS17335 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM341_RS17335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM341_RS17340 PF13247 4Fe-4S dicluster domain AM341_RS17345 PF03916 Polysulphide reductase, NrfD AM341_RS17350 PF00374 Nickel-dependent hydrogenase AM341_RS17355 PF01750 Hydrogenase maturation protease AM341_RS17360 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AM341_RS17365 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM341_RS17370 PF01455 HupF/HypC family AM341_RS17375 PF02798 Glutathione S-transferase, N-terminal domain AM341_RS17380 PF05257 CHAP domain AM341_RS17380 PF03738 Glutathionylspermidine synthase preATP-grasp AM341_RS17385 PF01384 Phosphate transporter family AM341_RS17405 PF01943 Polysaccharide biosynthesis protein AM341_RS17415 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM341_RS17420 PF03739 Lipopolysaccharide export system permease LptF/LptG AM341_RS17430 PF00155 Aminotransferase class I and II AM341_RS17435 PF00550 Phosphopantetheine attachment site AM341_RS17445 PF00501 AMP-binding enzyme AM341_RS17445 PF14535 AMP-binding enzyme C-terminal domain AM341_RS17455 PF00392 Bacterial regulatory proteins, gntR family AM341_RS17455 PF07729 FCD domain AM341_RS17460 PF01565 FAD binding domain AM341_RS17460 PF02913 FAD linked oxidases, C-terminal domain AM341_RS17465 PF01565 FAD binding domain AM341_RS17470 PF13183 4Fe-4S dicluster domain AM341_RS17470 PF02754 Cysteine-rich domain AM341_RS17475 PF03928 Haem-degrading AM341_RS17480 PF01274 Malate synthase AM341_RS17485 PF02652 L-lactate permease AM341_RS17495 PF13402 Peptidase M60, enhancin and enhancin-like AM341_RS17495 PF17291 N-terminal domain of M60-like peptidases AM341_RS17495 PF13322 Domain of unknown function (DUF4092) AM341_RS17500 PF06750 Bacterial Peptidase A24 N-terminal domain AM341_RS17500 PF01478 Type IV leader peptidase family AM341_RS17505 PF16549 Type II secretion system (T2SS) pilotin, S protein AM341_RS17510 PF11356 Type II secretion system protein C AM341_RS17515 PF00263 Bacterial type II and III secretion system protein AM341_RS17515 PF03958 Bacterial type II/III secretion system short domain AM341_RS17525 PF00482 Type II secretion system (T2SS), protein F AM341_RS17530 PF08334 Type II secretion system (T2SS), protein G AM341_RS17530 PF07963 Prokaryotic N-terminal methylation motif AM341_RS17535 PF12019 Type II transport protein GspH AM341_RS17540 PF07963 Prokaryotic N-terminal methylation motif AM341_RS17540 PF02501 Type II secretion system (T2SS), protein I AM341_RS17545 PF11612 Type II secretion system (T2SS), protein J AM341_RS17545 PF07963 Prokaryotic N-terminal methylation motif AM341_RS17550 PF03934 Type II secretion system (T2SS), protein K AM341_RS17555 PF12693 GspL periplasmic domain AM341_RS17560 PF04612 Type II secretion system (T2SS), protein M AM341_RS17580 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM341_RS17585 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM341_RS17590 PF06174 Protein of unknown function (DUF987) AM341_RS17595 PF04002 RadC-like JAB domain AM341_RS17600 PF03230 Antirestriction protein AM341_RS17605 PF06067 Domain of unknown function (DUF932) AM341_RS17610 PF06006 Bacterial protein of unknown function (DUF905) AM341_RS17620 PF13280 WYL domain AM341_RS17620 PF08220 DeoR-like helix-turn-helix domain AM341_RS17625 PF01926 50S ribosome-binding GTPase AM341_RS17670 PF08361 MAATS-type transcriptional repressor, C-terminal region AM341_RS17670 PF00440 Bacterial regulatory proteins, tetR family AM341_RS17680 PF12833 Helix-turn-helix domain AM341_RS17685 PF00936 BMC domain AM341_RS17690 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM341_RS17690 PF02772 S-adenosylmethionine synthetase, central domain AM341_RS17690 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM341_RS17695 PF12833 Helix-turn-helix domain AM341_RS17700 PF00672 HAMP domain AM341_RS17700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS17700 PF06580 Histidine kinase AM341_RS17700 PF02743 Cache domain AM341_RS17710 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM341_RS17730 PF04055 Radical SAM superfamily AM341_RS17735 PF01228 Glycine radical AM341_RS17735 PF02901 Pyruvate formate lyase-like AM341_RS17740 PF01965 DJ-1/PfpI family AM341_RS17750 PF00171 Aldehyde dehydrogenase family AM341_RS17755 PF00936 BMC domain AM341_RS17760 PF00936 BMC domain AM341_RS17765 PF00871 Acetokinase family AM341_RS17770 PF03928 Haem-degrading AM341_RS17775 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM341_RS17790 PF06130 Phosphate propanoyltransferase AM341_RS17795 PF00465 Iron-containing alcohol dehydrogenase AM341_RS17815 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AM341_RS17815 PF17287 POTRA domain AM341_RS17815 PF08479 POTRA domain, ShlB-type AM341_RS17880 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS17880 PF00107 Zinc-binding dehydrogenase AM341_RS17895 PF13520 Amino acid permease AM341_RS17900 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM341_RS17900 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM341_RS17900 PF01276 Orn/Lys/Arg decarboxylase, major domain AM341_RS17905 PF13520 Amino acid permease AM341_RS17920 PF01047 MarR family AM341_RS17935 PF13005 zinc-finger binding domain of transposase IS66 AM341_RS17935 PF13007 Transposase C of IS166 homeodomain AM341_RS17935 PF13817 IS66 C-terminal element AM341_RS17935 PF03050 Transposase IS66 family AM341_RS17940 PF05717 IS66 Orf2 like protein AM341_RS17975 PF04474 Protein of unknown function (DUF554) AM341_RS17985 PF01276 Orn/Lys/Arg decarboxylase, major domain AM341_RS17985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM341_RS17985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM341_RS17990 PF03825 Nucleoside H+ symporter AM341_RS17995 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM341_RS17995 PF01464 Transglycosylase SLT domain AM341_RS18000 PF04362 Bacterial Fe(2+) trafficking AM341_RS18005 PF00730 HhH-GPD superfamily base excision DNA repair protein AM341_RS18005 PF10576 Iron-sulfur binding domain of endonuclease III AM341_RS18005 PF14815 NUDIX domain AM341_RS18005 PF00633 Helix-hairpin-helix motif AM341_RS18015 PF02390 Putative methyltransferase AM341_RS18020 PF04320 Protein with unknown function (DUF469) AM341_RS18025 PF11101 Protein of unknown function (DUF2884) AM341_RS18030 PF00710 Asparaginase, N-terminal AM341_RS18030 PF17763 Glutaminase/Asparaginase C-terminal domain AM341_RS18035 PF06717 Protein of unknown function (DUF1202) AM341_RS18040 PF04055 Radical SAM superfamily AM341_RS18040 PF06969 HemN C-terminal domain AM341_RS18045 PF01725 Ham1 family AM341_RS18050 PF02594 Uncharacterised ACR, YggU family COG1872 AM341_RS18055 PF02325 YGGT family AM341_RS18060 PF01168 Alanine racemase, N-terminal domain AM341_RS18065 PF00437 Type II/IV secretion system protein AM341_RS18070 PF03652 Holliday junction resolvase AM341_RS18075 PF02622 Uncharacterized ACR, COG1678 AM341_RS18080 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM341_RS18080 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM341_RS18085 PF04452 RNA methyltransferase AM341_RS18090 PF04231 Endonuclease I AM341_RS18095 PF17283 SprT-like zinc ribbon domain AM341_RS18095 PF10263 SprT-like family AM341_RS18100 PF00083 Sugar (and other) transporter AM341_RS18105 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM341_RS18105 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM341_RS18105 PF02772 S-adenosylmethionine synthetase, central domain AM341_RS18115 PF17430 Uncharacterized YqgC-like AM341_RS18120 PF11036 Virulence promoting factor AM341_RS18125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM341_RS18125 PF17944 Arginine decarboxylase C-terminal helical extension AM341_RS18125 PF17810 Arginine decarboxylase helical bundle domain AM341_RS18130 PF00491 Arginase family AM341_RS18135 PF01435 Peptidase family M48 AM341_RS18140 PF02779 Transketolase, pyrimidine binding domain AM341_RS18140 PF00456 Transketolase, thiamine diphosphate binding domain AM341_RS18140 PF02780 Transketolase, C-terminal domain AM341_RS18145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS18150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS18150 PF02378 Phosphotransferase system, EIIC AM341_RS18155 PF00107 Zinc-binding dehydrogenase AM341_RS18155 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS18160 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM341_RS18165 PF05068 Mannitol repressor AM341_RS18180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM341_RS18180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM341_RS18185 PF00162 Phosphoglycerate kinase AM341_RS18190 PF01116 Fructose-bisphosphate aldolase class-II AM341_RS18200 PF05552 Conserved TM helix AM341_RS18200 PF00924 Mechanosensitive ion channel AM341_RS18205 PF01810 LysE type translocator AM341_RS18215 PF13737 Transposase DDE domain AM341_RS18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS18220 PF03466 LysR substrate binding domain AM341_RS18225 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM341_RS18225 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM341_RS18230 PF00378 Enoyl-CoA hydratase/isomerase AM341_RS18240 PF02310 B12 binding domain AM341_RS18240 PF01642 Methylmalonyl-CoA mutase AM341_RS18245 PF03466 LysR substrate binding domain AM341_RS18245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS18250 PF03466 LysR substrate binding domain AM341_RS18255 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM341_RS18260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM341_RS18260 PF01842 ACT domain AM341_RS18260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM341_RS18275 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM341_RS18285 PF05164 Cell division protein ZapA AM341_RS18295 PF03695 Uncharacterised protein family (UPF0149) AM341_RS18300 PF00557 Metallopeptidase family M24 AM341_RS18300 PF05195 Aminopeptidase P, N-terminal domain AM341_RS18305 PF01494 FAD binding domain AM341_RS18310 PF01494 FAD binding domain AM341_RS18315 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM341_RS18315 PF01571 Aminomethyltransferase folate-binding domain AM341_RS18320 PF01597 Glycine cleavage H-protein AM341_RS18325 PF02347 Glycine cleavage system P-protein AM341_RS18335 PF00232 Glycosyl hydrolase family 1 AM341_RS18340 PF04266 ASCH domain AM341_RS18345 PF03006 Haemolysin-III related AM341_RS18350 PF01571 Aminomethyltransferase folate-binding domain AM341_RS18355 PF03937 Flavinator of succinate dehydrogenase AM341_RS18360 PF07254 Membrane-bound toxin component of toxin-antitoxin system AM341_RS18365 PF00258 Flavodoxin AM341_RS18370 PF02899 Phage integrase, N-terminal SAM-like domain AM341_RS18370 PF00589 Phage integrase family AM341_RS18375 PF10411 Disulfide bond isomerase protein N-terminus AM341_RS18375 PF13098 Thioredoxin-like domain AM341_RS18380 PF01368 DHH family AM341_RS18380 PF17768 RecJ OB domain AM341_RS18380 PF02272 DHHA1 domain AM341_RS18390 PF00152 tRNA synthetases class II (D, K and N) AM341_RS18390 PF01336 OB-fold nucleic acid binding domain AM341_RS18395 PF00293 NUDIX domain AM341_RS18405 PF00860 Permease family AM341_RS18415 PF13247 4Fe-4S dicluster domain AM341_RS18415 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM341_RS18415 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS18420 PF13247 4Fe-4S dicluster domain AM341_RS18425 PF00860 Permease family AM341_RS18430 PF01979 Amidohydrolase family AM341_RS18435 PF00860 Permease family AM341_RS18440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM341_RS18440 PF01799 [2Fe-2S] binding domain AM341_RS18440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM341_RS18445 PF00941 FAD binding domain in molybdopterin dehydrogenase AM341_RS18450 PF01979 Amidohydrolase family AM341_RS18455 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM341_RS18455 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS18460 PF12804 MobA-like NTP transferase domain AM341_RS18470 PF13478 XdhC Rossmann domain AM341_RS18470 PF02625 XdhC and CoxI family AM341_RS18475 PF00696 Amino acid kinase family AM341_RS18480 PF01979 Amidohydrolase family AM341_RS18485 PF01546 Peptidase family M20/M25/M40 AM341_RS18485 PF07687 Peptidase dimerisation domain AM341_RS18490 PF00291 Pyridoxal-phosphate dependent enzyme AM341_RS18495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM341_RS18495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM341_RS18500 PF13188 PAS domain AM341_RS18500 PF00158 Sigma-54 interaction domain AM341_RS18500 PF02954 Bacterial regulatory protein, Fis family AM341_RS18505 PF00111 2Fe-2S iron-sulfur cluster binding domain AM341_RS18505 PF01799 [2Fe-2S] binding domain AM341_RS18510 PF00941 FAD binding domain in molybdopterin dehydrogenase AM341_RS18510 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM341_RS18515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM341_RS18515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM341_RS18525 PF01476 LysM domain AM341_RS18525 PF01551 Peptidase family M23 AM341_RS18535 PF00589 Phage integrase family AM341_RS18535 PF02899 Phage integrase, N-terminal SAM-like domain AM341_RS18570 PF01609 Transposase DDE domain AM341_RS18580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM341_RS18585 PF00813 FliP family AM341_RS18590 PF01313 Bacterial export proteins, family 3 AM341_RS18595 PF01311 Bacterial export proteins, family 1 AM341_RS18600 PF01312 FlhB HrpN YscU SpaS Family AM341_RS18605 PF01312 FlhB HrpN YscU SpaS Family AM341_RS18625 PF13737 Transposase DDE domain AM341_RS18635 PF09480 Type III secretion system protein PrgH-EprH (PrgH) AM341_RS18640 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AM341_RS18650 PF01514 Secretory protein of YscJ/FliF family AM341_RS18655 PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) AM341_RS18670 PF00072 Response regulator receiver domain AM341_RS18670 PF00196 Bacterial regulatory proteins, luxR family AM341_RS18675 PF00072 Response regulator receiver domain AM341_RS18675 PF00196 Bacterial regulatory proteins, luxR family AM341_RS18680 PF01464 Transglycosylase SLT domain AM341_RS18690 PF00486 Transcriptional regulatory protein, C terminal AM341_RS18695 PF07720 Tetratricopeptide repeat AM341_RS18725 PF00486 Transcriptional regulatory protein, C terminal AM341_RS18730 PF00196 Bacterial regulatory proteins, luxR family AM341_RS18735 PF03222 Tryptophan/tyrosine permease family AM341_RS18740 PF00108 Thiolase, N-terminal domain AM341_RS18740 PF02803 Thiolase, C-terminal domain AM341_RS18745 PF04962 KduI/IolB family AM341_RS18755 PF00083 Sugar (and other) transporter AM341_RS18760 PF01177 Asp/Glu/Hydantoin racemase AM341_RS18765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS18765 PF03466 LysR substrate binding domain AM341_RS18770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM341_RS18770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM341_RS18775 PF00356 Bacterial regulatory proteins, lacI family AM341_RS18780 PF00501 AMP-binding enzyme AM341_RS18780 PF01553 Acyltransferase AM341_RS18785 PF07690 Major Facilitator Superfamily AM341_RS18790 PF00248 Aldo/keto reductase family AM341_RS18795 PF06004 Bacterial protein of unknown function (DUF903) AM341_RS18800 PF03741 Integral membrane protein TerC family AM341_RS18805 PF02976 DNA mismatch repair enzyme MutH AM341_RS18810 PF00293 NUDIX domain AM341_RS18815 PF02896 PEP-utilising enzyme, TIM barrel domain AM341_RS18815 PF01590 GAF domain AM341_RS18815 PF05524 PEP-utilising enzyme, N-terminal AM341_RS18815 PF00391 PEP-utilising enzyme, mobile domain AM341_RS18820 PF01790 Prolipoprotein diacylglyceryl transferase AM341_RS18825 PF00303 Thymidylate synthase AM341_RS18830 PF07963 Prokaryotic N-terminal methylation motif AM341_RS18835 PF07963 Prokaryotic N-terminal methylation motif AM341_RS18840 PF10713 Protein of unknown function (DUF2509) AM341_RS18845 PF07963 Prokaryotic N-terminal methylation motif AM341_RS18845 PF12528 Type II secretion prepilin peptidase dependent protein C AM341_RS18850 PF17946 RecC C-terminal domain AM341_RS18855 PF05193 Peptidase M16 inactive domain AM341_RS18855 PF00675 Insulinase (Peptidase family M16) AM341_RS18855 PF16187 Middle or third domain of peptidase_M16 AM341_RS18860 PF00580 UvrD/REP helicase N-terminal domain AM341_RS18860 PF13361 UvrD-like helicase C-terminal domain AM341_RS18860 PF12705 PD-(D/E)XK nuclease superfamily AM341_RS18865 PF13538 UvrD-like helicase C-terminal domain AM341_RS18870 PF00696 Amino acid kinase family AM341_RS18870 PF00583 Acetyltransferase (GNAT) family AM341_RS18880 PF01520 N-acetylmuramoyl-L-alanine amidase AM341_RS18880 PF11741 AMIN domain AM341_RS18905 PF06725 3D domain AM341_RS18905 PF03562 MltA specific insert domain AM341_RS18910 PF00899 ThiF family AM341_RS18915 PF02657 Fe-S metabolism associated domain AM341_RS18920 PF00266 Aminotransferase class-V AM341_RS18925 PF06004 Bacterial protein of unknown function (DUF903) AM341_RS18930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS18930 PF03466 LysR substrate binding domain AM341_RS18935 PF04241 Protein of unknown function (DUF423) AM341_RS18940 PF18125 RlmM ferredoxin-like domain AM341_RS18940 PF01728 FtsJ-like methyltransferase AM341_RS18945 PF00455 DeoR C terminal sensor domain AM341_RS18945 PF08220 DeoR-like helix-turn-helix domain AM341_RS18950 PF05025 RbsD / FucU transport protein family AM341_RS18955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS18955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS18960 PF02952 L-fucose isomerase, C-terminal domain AM341_RS18960 PF07882 L-fucose isomerase, second N-terminal domain AM341_RS18960 PF07881 L-fucose isomerase, first N-terminal domain AM341_RS18965 PF07690 Major Facilitator Superfamily AM341_RS18970 PF00596 Class II Aldolase and Adducin N-terminal domain AM341_RS18975 PF00465 Iron-containing alcohol dehydrogenase AM341_RS18980 PF01367 5'-3' exonuclease, C-terminal SAM fold AM341_RS18980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM341_RS18985 PF03313 Serine dehydratase alpha chain AM341_RS18985 PF03315 Serine dehydratase beta chain AM341_RS18995 PF11892 Domain of unknown function (DUF3412) AM341_RS18995 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM341_RS18995 PF03641 Possible lysine decarboxylase AM341_RS19000 PF14489 QueF-like protein AM341_RS19000 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM341_RS19005 PF07348 Syd protein (SUKH-2) AM341_RS19010 PF04287 tRNA pseudouridine synthase C AM341_RS19015 PF00849 RNA pseudouridylate synthase AM341_RS19020 PF00258 Flavodoxin AM341_RS19025 PF07690 Major Facilitator Superfamily AM341_RS19030 PF13378 Enolase C-terminal domain-like AM341_RS19030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM341_RS19035 PF13378 Enolase C-terminal domain-like AM341_RS19040 PF00672 HAMP domain AM341_RS19040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS19040 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS19040 PF00072 Response regulator receiver domain AM341_RS19040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM341_RS19040 PF01627 Hpt domain AM341_RS19045 PF05958 tRNA (Uracil-5-)-methyltransferase AM341_RS19045 PF01938 TRAM domain AM341_RS19050 PF02824 TGS domain AM341_RS19050 PF13291 ACT domain AM341_RS19050 PF04607 Region found in RelA / SpoT proteins AM341_RS19055 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM341_RS19060 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM341_RS19065 PF03819 MazG nucleotide pyrophosphohydrolase domain AM341_RS19070 PF06418 CTP synthase N-terminus AM341_RS19070 PF00117 Glutamine amidotransferase class-I AM341_RS19075 PF00113 Enolase, C-terminal TIM barrel domain AM341_RS19075 PF03952 Enolase, N-terminal domain AM341_RS19080 PF04536 TPM domain AM341_RS19090 PF04055 Radical SAM superfamily AM341_RS19095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS19095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS19100 PF07690 Major Facilitator Superfamily AM341_RS19110 PF02913 FAD linked oxidases, C-terminal domain AM341_RS19110 PF01565 FAD binding domain AM341_RS19115 PF00083 Sugar (and other) transporter AM341_RS19120 PF01012 Electron transfer flavoprotein domain AM341_RS19125 PF01012 Electron transfer flavoprotein domain AM341_RS19125 PF00766 Electron transfer flavoprotein FAD-binding domain AM341_RS19130 PF04309 Glycerol-3-phosphate responsive antiterminator AM341_RS19140 PF01266 FAD dependent oxidoreductase AM341_RS19145 PF01242 6-pyruvoyl tetrahydropterin synthase AM341_RS19150 PF00258 Flavodoxin AM341_RS19150 PF00667 FAD binding domain AM341_RS19150 PF00175 Oxidoreductase NAD-binding domain AM341_RS19155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM341_RS19155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM341_RS19160 PF01507 Phosphoadenosine phosphosulfate reductase family AM341_RS19170 PF18019 HD domain AM341_RS19170 PF00271 Helicase conserved C-terminal domain AM341_RS19170 PF00270 DEAD/DEAH box helicase AM341_RS19175 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) AM341_RS19180 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) AM341_RS19185 PF09344 CT1975-like protein AM341_RS19190 PF09704 CRISPR-associated protein (Cas_Cas5) AM341_RS19195 PF08798 CRISPR associated protein AM341_RS19200 PF01867 CRISPR associated protein Cas1 AM341_RS19205 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) AM341_RS19210 PF04389 Peptidase family M28 AM341_RS19215 PF01507 Phosphoadenosine phosphosulfate reductase family AM341_RS19220 PF00009 Elongation factor Tu GTP binding domain AM341_RS19230 PF12084 Protein of unknown function (DUF3561) AM341_RS19235 PF04977 Septum formation initiator AM341_RS19240 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM341_RS19245 PF02542 YgbB family AM341_RS19250 PF01142 tRNA pseudouridine synthase D (TruD) AM341_RS19255 PF01975 Survival protein SurE AM341_RS19265 PF01476 LysM domain AM341_RS19265 PF01551 Peptidase family M23 AM341_RS19270 PF04542 Sigma-70 region 2 AM341_RS19270 PF04545 Sigma-70, region 4 AM341_RS19270 PF00140 Sigma-70 factor, region 1.2 AM341_RS19270 PF04539 Sigma-70 region 3 AM341_RS19275 PF02447 GntP family permease AM341_RS19280 PF01261 Xylose isomerase-like TIM barrel AM341_RS19285 PF00596 Class II Aldolase and Adducin N-terminal domain AM341_RS19290 PF07005 Sugar-binding N-terminal domain AM341_RS19290 PF17042 Nucleotide-binding C-terminal domain AM341_RS19295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM341_RS19295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM341_RS19300 PF00455 DeoR C terminal sensor domain AM341_RS19300 PF08220 DeoR-like helix-turn-helix domain AM341_RS19305 PF00149 Calcineurin-like phosphoesterase AM341_RS19310 PF05188 MutS domain II AM341_RS19310 PF05190 MutS family domain IV AM341_RS19310 PF00488 MutS domain V AM341_RS19310 PF01624 MutS domain I AM341_RS19310 PF05192 MutS domain III AM341_RS19315 PF11756 Nitrous oxide-stimulated promoter AM341_RS19320 PF00158 Sigma-54 interaction domain AM341_RS19320 PF01590 GAF domain AM341_RS19325 PF00586 AIR synthase related protein, N-terminal domain AM341_RS19325 PF02769 AIR synthase related protein, C-terminal domain AM341_RS19330 PF01924 Hydrogenase formation hypA family AM341_RS19335 PF01455 HupF/HypC family AM341_RS19340 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM341_RS19345 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM341_RS19350 PF11046 Transcriptional repressor of hyc and hyp operons AM341_RS19355 PF13247 4Fe-4S dicluster domain AM341_RS19360 PF00361 Proton-conducting membrane transporter AM341_RS19365 PF00146 NADH dehydrogenase AM341_RS19370 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM341_RS19370 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM341_RS19370 PF00374 Nickel-dependent hydrogenase AM341_RS19375 PF12838 4Fe-4S dicluster domain AM341_RS19380 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM341_RS19385 PF07450 Formate hydrogenlyase maturation protein HycH AM341_RS19390 PF01750 Hydrogenase maturation protease AM341_RS19395 PF00232 Glycosyl hydrolase family 1 AM341_RS19400 PF00367 phosphotransferase system, EIIB AM341_RS19400 PF02378 Phosphotransferase system, EIIC AM341_RS19405 PF00356 Bacterial regulatory proteins, lacI family AM341_RS19410 PF12800 4Fe-4S binding domain AM341_RS19410 PF13247 4Fe-4S dicluster domain AM341_RS19415 PF00708 Acylphosphatase AM341_RS19415 PF01300 Telomere recombination AM341_RS19415 PF07503 HypF finger AM341_RS19415 PF17788 HypF Kae1-like domain AM341_RS19420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS19420 PF18113 Rubredoxin binding C-terminal domain AM341_RS19425 PF00301 Rubredoxin AM341_RS19425 PF00258 Flavodoxin AM341_RS19425 PF00753 Metallo-beta-lactamase superfamily AM341_RS19430 PF00158 Sigma-54 interaction domain AM341_RS19430 PF01590 GAF domain AM341_RS19435 PF01380 SIS domain AM341_RS19435 PF00571 CBS domain AM341_RS19440 PF08220 DeoR-like helix-turn-helix domain AM341_RS19440 PF00455 DeoR C terminal sensor domain AM341_RS19445 PF06923 Glucitol operon activator protein (GutM) AM341_RS19450 PF00106 short chain dehydrogenase AM341_RS19455 PF03829 PTS system glucitol/sorbitol-specific IIA component AM341_RS19460 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AM341_RS19460 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AM341_RS19465 PF03608 PTS system enzyme II sorbitol-specific factor AM341_RS19470 PF13406 Transglycosylase SLT domain AM341_RS19475 PF02464 Competence-damaged protein AM341_RS19480 PF00154 recA bacterial DNA recombination protein AM341_RS19485 PF02631 RecX family AM341_RS19490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM341_RS19490 PF02272 DHHA1 domain AM341_RS19490 PF01411 tRNA synthetases class II (A) AM341_RS19495 PF02599 Global regulator protein family AM341_RS19525 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS19530 PF09335 SNARE associated Golgi protein AM341_RS19535 PF04262 Glutamate-cysteine ligase AM341_RS19540 PF02664 S-Ribosylhomocysteinase (LuxS) AM341_RS19545 PF07690 Major Facilitator Superfamily AM341_RS19550 PF00529 HlyD membrane-fusion protein of T1SS AM341_RS19550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS19555 PF01047 MarR family AM341_RS19560 PF05437 Branched-chain amino acid transport protein (AzlD) AM341_RS19565 PF03591 AzlC protein AM341_RS19570 PF07690 Major Facilitator Superfamily AM341_RS19575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM341_RS19580 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS19585 PF00571 CBS domain AM341_RS19585 PF00005 ABC transporter AM341_RS19595 PF00268 Ribonucleotide reductase, small chain AM341_RS19600 PF02867 Ribonucleotide reductase, barrel domain AM341_RS19600 PF08343 Ribonucleotide reductase N-terminal AM341_RS19600 PF00317 Ribonucleotide reductase, all-alpha domain AM341_RS19605 PF07972 NrdI Flavodoxin like AM341_RS19610 PF00462 Glutaredoxin AM341_RS19615 PF05957 Bacterial protein of unknown function (DUF883) AM341_RS19620 PF09400 Protein of unknown function (DUF2002) AM341_RS19625 PF06610 L-alanine exporter AM341_RS19630 PF00816 H-NS histone family AM341_RS19635 PF00581 Rhodanese-like domain AM341_RS19635 PF11127 Protein of unknown function (DUF2892) AM341_RS19640 PF01022 Bacterial regulatory protein, arsR family AM341_RS19645 PF01679 Proteolipid membrane potential modulator AM341_RS19650 PF04972 BON domain AM341_RS19650 PF01476 LysM domain AM341_RS19655 PF07729 FCD domain AM341_RS19655 PF00392 Bacterial regulatory proteins, gntR family AM341_RS19660 PF00324 Amino acid permease AM341_RS19665 PF00202 Aminotransferase class-III AM341_RS19670 PF00171 Aldehyde dehydrogenase family AM341_RS19675 PF01266 FAD dependent oxidoreductase AM341_RS19680 PF08943 CsiD AM341_RS19695 PF00128 Alpha amylase, catalytic domain AM341_RS19705 PF17612 Family of unknown function (DUF5507) AM341_RS19710 PF17621 Family of unknown function (DUF5508) AM341_RS19730 PF03797 Autotransporter beta-domain AM341_RS19730 PF03212 Pertactin AM341_RS19730 PF16168 Adhesin of bacterial autotransporter system, probable stalk AM341_RS19740 PF01668 SmpB protein AM341_RS19745 PF03364 Polyketide cyclase / dehydrase and lipid transport AM341_RS19750 PF03658 RnfH family Ubiquitin AM341_RS19755 PF04355 SmpA / OmlA family AM341_RS19760 PF02463 RecF/RecN/SMC N terminal domain AM341_RS19765 PF01513 ATP-NAD kinase AM341_RS19775 PF01025 GrpE AM341_RS19780 PF03471 Transporter associated domain AM341_RS19780 PF01595 Cyclin M transmembrane N-terminal domain AM341_RS19780 PF00571 CBS domain AM341_RS19785 PF01578 Cytochrome C assembly protein AM341_RS19790 PF02978 Signal peptide binding domain AM341_RS19790 PF00448 SRP54-type protein, GTPase domain AM341_RS19790 PF02881 SRP54-type protein, helical bundle domain AM341_RS19795 PF00886 Ribosomal protein S16 AM341_RS19800 PF05239 PRC-barrel domain AM341_RS19800 PF01782 RimM N-terminal domain AM341_RS19805 PF01746 tRNA (Guanine-1)-methyltransferase AM341_RS19810 PF01245 Ribosomal protein L19 AM341_RS19815 PF00691 OmpA family AM341_RS19820 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS19820 PF17152 Periplasmic sensor domain AM341_RS19825 PF13689 YfiR/HmsC-like AM341_RS19830 PF10973 Protein of unknown function (DUF2799) AM341_RS19835 PF00793 DAHP synthetase I family AM341_RS19840 PF01817 Chorismate mutase type II AM341_RS19840 PF02153 Prephenate dehydrogenase AM341_RS19845 PF00800 Prephenate dehydratase AM341_RS19845 PF01817 Chorismate mutase type II AM341_RS19850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM341_RS19860 PF13525 Outer membrane lipoprotein AM341_RS19865 PF00849 RNA pseudouridylate synthase AM341_RS19865 PF01479 S4 domain AM341_RS19870 PF02578 Multi-copper polyphenol oxidoreductase laccase AM341_RS19875 PF10431 C-terminal, D2-small domain, of ClpB protein AM341_RS19875 PF00004 ATPase family associated with various cellular activities (AAA) AM341_RS19875 PF07724 AAA domain (Cdc48 subfamily) AM341_RS19875 PF17871 AAA lid domain AM341_RS19875 PF02861 Clp amino terminal domain, pathogenicity island component AM341_RS19905 PF00083 Sugar (and other) transporter AM341_RS19910 PF10043 Predicted periplasmic lipoprotein (DUF2279) AM341_RS19915 PF13091 PLD-like domain AM341_RS19920 PF13380 CoA binding domain AM341_RS19920 PF00583 Acetyltransferase (GNAT) family AM341_RS19920 PF13607 Succinyl-CoA ligase like flavodoxin domain AM341_RS19925 PF03942 DTW domain AM341_RS19930 PF00085 Thioredoxin AM341_RS19940 PF00588 SpoU rRNA Methylase family AM341_RS19940 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM341_RS19945 PF03167 Uracil DNA glycosylase superfamily AM341_RS19950 PF01228 Glycine radical AM341_RS19955 PF01810 LysE type translocator AM341_RS19960 PF03466 LysR substrate binding domain AM341_RS19960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS19965 PF00270 DEAD/DEAH box helicase AM341_RS19965 PF00271 Helicase conserved C-terminal domain AM341_RS19970 PF05175 Methyltransferase small domain AM341_RS19975 PF00890 FAD binding domain AM341_RS19975 PF02910 Fumarate reductase flavoprotein C-term AM341_RS19980 PF08281 Sigma-70, region 4 AM341_RS19980 PF04542 Sigma-70 region 2 AM341_RS19985 PF03873 Anti sigma-E protein RseA, C-terminal domain AM341_RS19985 PF03872 Anti sigma-E protein RseA, N-terminal domain AM341_RS19990 PF17188 MucB/RseB C-terminal domain AM341_RS19990 PF03888 MucB/RseB N-terminal domain AM341_RS20000 PF03144 Elongation factor Tu domain 2 AM341_RS20000 PF00009 Elongation factor Tu GTP binding domain AM341_RS20000 PF06421 GTP-binding protein LepA C-terminus AM341_RS20000 PF00679 Elongation factor G C-terminus AM341_RS20005 PF10502 Signal peptidase, peptidase S26 AM341_RS20015 PF00035 Double-stranded RNA binding motif AM341_RS20015 PF14622 Ribonuclease-III-like AM341_RS20020 PF07650 KH domain AM341_RS20020 PF01926 50S ribosome-binding GTPase AM341_RS20025 PF02565 Recombination protein O C terminal AM341_RS20025 PF11967 Recombination protein O N terminal AM341_RS20030 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM341_RS20035 PF01648 4'-phosphopantetheinyl transferase superfamily AM341_RS20055 PF12838 4Fe-4S dicluster domain AM341_RS20060 PF01418 Helix-turn-helix domain, rpiR family AM341_RS20060 PF01380 SIS domain AM341_RS20070 PF14437 MafB19-like deaminase AM341_RS20075 PF01464 Transglycosylase SLT domain AM341_RS20075 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS20085 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM341_RS20085 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM341_RS20085 PF02769 AIR synthase related protein, C-terminal domain AM341_RS20090 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS20090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS20095 PF13942 YfhG lipoprotein AM341_RS20100 PF00158 Sigma-54 interaction domain AM341_RS20100 PF00072 Response regulator receiver domain AM341_RS20105 PF00543 Nitrogen regulatory protein P-II AM341_RS20110 PF00175 Oxidoreductase NAD-binding domain AM341_RS20110 PF00042 Globin AM341_RS20110 PF00970 Oxidoreductase FAD-binding domain AM341_RS20115 PF00464 Serine hydroxymethyltransferase AM341_RS20120 PF00480 ROK family AM341_RS20125 PF13181 Tetratricopeptide repeat AM341_RS20125 PF17128 Domain of unknown function (DUF5107) AM341_RS20130 PF13407 Periplasmic binding protein domain AM341_RS20135 PF00005 ABC transporter AM341_RS20140 PF02653 Branched-chain amino acid transport system / permease component AM341_RS20145 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS20145 PF00107 Zinc-binding dehydrogenase AM341_RS20150 PF01263 Aldose 1-epimerase AM341_RS20155 PF07681 DoxX AM341_RS20160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS20160 PF14759 Reductase C-terminal AM341_RS20165 PF00106 short chain dehydrogenase AM341_RS20170 PF00355 Rieske [2Fe-2S] domain AM341_RS20175 PF00866 Ring hydroxylating beta subunit AM341_RS20180 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM341_RS20180 PF00355 Rieske [2Fe-2S] domain AM341_RS20185 PF03466 LysR substrate binding domain AM341_RS20185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS20190 PF12832 MFS_1 like family AM341_RS20195 PF00874 PRD domain AM341_RS20200 PF12146 Serine aminopeptidase, S33 AM341_RS20205 PF00459 Inositol monophosphatase family AM341_RS20210 PF00588 SpoU rRNA Methylase family AM341_RS20215 PF02082 Transcriptional regulator AM341_RS20220 PF00266 Aminotransferase class-V AM341_RS20225 PF01592 NifU-like N terminal domain AM341_RS20230 PF01521 Iron-sulphur cluster biosynthesis AM341_RS20235 PF07743 HSCB C-terminal oligomerisation domain AM341_RS20240 PF00012 Hsp70 protein AM341_RS20245 PF00111 2Fe-2S iron-sulfur cluster binding domain AM341_RS20250 PF04384 Iron-sulphur cluster assembly AM341_RS20255 PF12404 Peptidase AM341_RS20255 PF00883 Cytosol aminopeptidase family, catalytic domain AM341_RS20260 PF07179 SseB protein N-terminal domain AM341_RS20260 PF14581 SseB protein C-terminal domain AM341_RS20265 PF00581 Rhodanese-like domain AM341_RS20270 PF00207 Alpha-2-macroglobulin family AM341_RS20270 PF07703 Alpha-2-macroglobulin bait region domain AM341_RS20270 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AM341_RS20270 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AM341_RS20270 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AM341_RS20270 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AM341_RS20270 PF01835 MG2 domain AM341_RS20270 PF07678 A-macroglobulin TED domain AM341_RS20270 PF17962 Bacterial macroglobulin domain 6 AM341_RS20275 PF06832 Penicillin-Binding Protein C-terminus Family AM341_RS20275 PF00912 Transglycosylase AM341_RS20275 PF00905 Penicillin binding protein transpeptidase domain AM341_RS20280 PF00334 Nucleoside diphosphate kinase AM341_RS20285 PF04055 Radical SAM superfamily AM341_RS20295 PF13464 Domain of unknown function (DUF4115) AM341_RS20300 PF04551 GcpE protein AM341_RS20305 PF03129 Anticodon binding domain AM341_RS20305 PF13393 Histidyl-tRNA synthetase AM341_RS20310 PF09976 Tetratricopeptide repeat-like domain AM341_RS20315 PF13360 PQQ-like domain AM341_RS20320 PF01926 50S ribosome-binding GTPase AM341_RS20320 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM341_RS20325 PF07191 zinc-ribbons AM341_RS20330 PF02601 Exonuclease VII, large subunit AM341_RS20330 PF13742 OB-fold nucleic acid binding domain AM341_RS20335 PF00478 IMP dehydrogenase / GMP reductase domain AM341_RS20335 PF00571 CBS domain AM341_RS20340 PF00958 GMP synthase C terminal domain AM341_RS20340 PF02540 NAD synthase AM341_RS20340 PF00117 Glutamine amidotransferase class-I AM341_RS20345 PF17358 Family of unknown function (DUF5384) AM341_RS20350 PF05433 Glycine zipper 2TM domain AM341_RS20360 PF11119 Protein of unknown function (DUF2633) AM341_RS20370 PF05231 MASE1 AM341_RS20370 PF00563 EAL domain AM341_RS20375 PF02541 Ppx/GppA phosphatase family AM341_RS20380 PF02503 Polyphosphate kinase middle domain AM341_RS20380 PF13089 Polyphosphate kinase N-terminal domain AM341_RS20380 PF17941 Polyphosphate kinase C-terminal domain 1 AM341_RS20380 PF13090 Polyphosphate kinase C-terminal domain 2 AM341_RS20385 PF00551 Formyl transferase AM341_RS20390 PF00586 AIR synthase related protein, N-terminal domain AM341_RS20390 PF02769 AIR synthase related protein, C-terminal domain AM341_RS20405 PF00860 Permease family AM341_RS20410 PF00308 Bacterial dnaA protein AM341_RS20415 PF03960 ArsC family AM341_RS20420 PF01435 Peptidase family M48 AM341_RS20425 PF01594 AI-2E family transporter AM341_RS20435 PF01226 Formate/nitrite transporter AM341_RS20440 PF00158 Sigma-54 interaction domain AM341_RS20440 PF01590 GAF domain AM341_RS20445 PF07450 Formate hydrogenlyase maturation protein HycH AM341_RS20450 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM341_RS20455 PF12838 4Fe-4S dicluster domain AM341_RS20460 PF00374 Nickel-dependent hydrogenase AM341_RS20460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM341_RS20460 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM341_RS20465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM341_RS20465 PF00361 Proton-conducting membrane transporter AM341_RS20470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM341_RS20475 PF00361 Proton-conducting membrane transporter AM341_RS20475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM341_RS20480 PF00146 NADH dehydrogenase AM341_RS20485 PF00361 Proton-conducting membrane transporter AM341_RS20490 PF00037 4Fe-4S binding domain AM341_RS20490 PF12798 4Fe-4S binding domain AM341_RS20495 PF00578 AhpC/TSA family AM341_RS20500 PF01842 ACT domain AM341_RS20505 PF00701 Dihydrodipicolinate synthetase family AM341_RS20510 PF06804 NlpB/DapX lipoprotein AM341_RS20515 PF01259 SAICAR synthetase AM341_RS20520 PF04228 Putative neutral zinc metallopeptidase AM341_RS20525 PF17176 tRNA-binding domain AM341_RS20525 PF05127 Helicase AM341_RS20525 PF13718 GNAT acetyltransferase 2 AM341_RS20525 PF08351 Domain of unknown function (DUF1726) AM341_RS20530 PF02230 Phospholipase/Carboxylesterase AM341_RS20535 PF13980 Uncharacterised protein family (UPF0370) AM341_RS20540 PF07687 Peptidase dimerisation domain AM341_RS20540 PF01546 Peptidase family M20/M25/M40 AM341_RS20545 PF03960 ArsC family AM341_RS20555 PF00873 AcrB/AcrD/AcrF family AM341_RS20560 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM341_RS20560 PF00672 HAMP domain AM341_RS20560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS20560 PF07730 Histidine kinase AM341_RS20565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS20565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM341_RS20565 PF13247 4Fe-4S dicluster domain AM341_RS20570 PF00293 NUDIX domain AM341_RS20575 PF06674 Protein of unknown function (DUF1176) AM341_RS20580 PF02780 Transketolase, C-terminal domain AM341_RS20580 PF02779 Transketolase, pyrimidine binding domain AM341_RS20580 PF00456 Transketolase, thiamine diphosphate binding domain AM341_RS20585 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM341_RS20590 PF00390 Malic enzyme, N-terminal domain AM341_RS20590 PF01515 Phosphate acetyl/butaryl transferase AM341_RS20590 PF03949 Malic enzyme, NAD binding domain AM341_RS20595 PF00936 BMC domain AM341_RS20600 PF10662 Ethanolamine utilisation - propanediol utilisation AM341_RS20605 PF06249 Ethanolamine utilisation protein EutQ AM341_RS20610 PF01923 Cobalamin adenosyltransferase AM341_RS20615 PF01515 Phosphate acetyl/butaryl transferase AM341_RS20620 PF00936 BMC domain AM341_RS20625 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM341_RS20630 PF00171 Aldehyde dehydrogenase family AM341_RS20640 PF00465 Iron-containing alcohol dehydrogenase AM341_RS20645 PF04346 Ethanolamine utilisation protein, EutH AM341_RS20650 PF06277 Ethanolamine utilisation protein EutA AM341_RS20655 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM341_RS20660 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM341_RS20665 PF00936 BMC domain AM341_RS20670 PF00936 BMC domain AM341_RS20670 PF16365 Ethanolamine utilization protein EutK C-terminus AM341_RS20675 PF12833 Helix-turn-helix domain AM341_RS20680 PF01218 Coproporphyrinogen III oxidase AM341_RS20685 PF01520 N-acetylmuramoyl-L-alanine amidase AM341_RS20690 PF00583 Acetyltransferase (GNAT) family AM341_RS20695 PF11143 Protein of unknown function (DUF2919) AM341_RS20700 PF06572 Protein of unknown function (DUF1131) AM341_RS20705 PF04261 Dyp-type peroxidase family AM341_RS20710 PF00144 Beta-lactamase AM341_RS20715 PF02378 Phosphotransferase system, EIIC AM341_RS20715 PF00367 phosphotransferase system, EIIB AM341_RS20720 PF01380 SIS domain AM341_RS20725 PF01380 SIS domain AM341_RS20725 PF01418 Helix-turn-helix domain, rpiR family AM341_RS20745 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS20750 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS20755 PF00005 ABC transporter AM341_RS20760 PF00291 Pyridoxal-phosphate dependent enzyme AM341_RS20765 PF05406 WGR domain AM341_RS20770 PF17263 Family of unknown function (DUF5329) AM341_RS20775 PF08543 Phosphomethylpyrimidine kinase AM341_RS20780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM341_RS20785 PF02896 PEP-utilising enzyme, TIM barrel domain AM341_RS20785 PF00391 PEP-utilising enzyme, mobile domain AM341_RS20785 PF05524 PEP-utilising enzyme, N-terminal AM341_RS20790 PF00381 PTS HPr component phosphorylation site AM341_RS20795 PF00291 Pyridoxal-phosphate dependent enzyme AM341_RS20805 PF04354 ZipA, C-terminal FtsZ-binding domain AM341_RS20810 PF12826 Helix-hairpin-helix motif AM341_RS20810 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM341_RS20810 PF03120 NAD-dependent DNA ligase OB-fold domain AM341_RS20810 PF00533 BRCA1 C Terminus (BRCT) domain AM341_RS20810 PF01653 NAD-dependent DNA ligase adenylation domain AM341_RS20815 PF12843 Putative quorum-sensing-regulated virulence factor AM341_RS20820 PF13593 SBF-like CPA transporter family (DUF4137) AM341_RS20825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS20825 PF03466 LysR substrate binding domain AM341_RS20830 PF03502 Nucleoside-specific channel-forming protein, Tsx AM341_RS20835 PF01048 Phosphorylase superfamily AM341_RS20840 PF03825 Nucleoside H+ symporter AM341_RS20850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS20850 PF03466 LysR substrate binding domain AM341_RS20875 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM341_RS20880 PF07037 Putative transcription regulator (DUF1323) AM341_RS20885 PF07037 Putative transcription regulator (DUF1323) AM341_RS20900 PF05231 MASE1 AM341_RS20900 PF00563 EAL domain AM341_RS20905 PF01609 Transposase DDE domain AM341_RS20910 PF07662 Na+ dependent nucleoside transporter C-terminus AM341_RS20910 PF07670 Nucleoside recognition AM341_RS20910 PF01773 Na+ dependent nucleoside transporter N-terminus AM341_RS20915 PF01566 Natural resistance-associated macrophage protein AM341_RS20920 PF10697 Protein of unknown function (DUF2502) AM341_RS20925 PF00654 Voltage gated chloride channel AM341_RS20930 PF02685 Glucokinase AM341_RS20935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS20940 PF02378 Phosphotransferase system, EIIC AM341_RS20945 PF01321 Creatinase/Prolidase N-terminal domain AM341_RS20945 PF00557 Metallopeptidase family M24 AM341_RS20950 PF05343 M42 glutamyl aminopeptidase AM341_RS20955 PF00391 PEP-utilising enzyme, mobile domain AM341_RS20955 PF02896 PEP-utilising enzyme, TIM barrel domain AM341_RS20955 PF00381 PTS HPr component phosphorylation site AM341_RS20955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS20955 PF05524 PEP-utilising enzyme, N-terminal AM341_RS20965 PF00072 Response regulator receiver domain AM341_RS20965 PF04397 LytTr DNA-binding domain AM341_RS20970 PF06580 Histidine kinase AM341_RS20970 PF07694 5TMR of 5TMR-LYT AM341_RS20970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS20975 PF00155 Aminotransferase class I and II AM341_RS20985 PF03279 Bacterial lipid A biosynthesis acyltransferase AM341_RS20990 PF10810 Protein of unknown function (DUF2545) AM341_RS21000 PF10938 YfdX protein AM341_RS21005 PF02515 CoA-transferase family III AM341_RS21010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM341_RS21010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM341_RS21010 PF00205 Thiamine pyrophosphate enzyme, central domain AM341_RS21015 PF03547 Membrane transport protein AM341_RS21020 PF02515 CoA-transferase family III AM341_RS21025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS21025 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS21025 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS21025 PF00072 Response regulator receiver domain AM341_RS21025 PF01627 Hpt domain AM341_RS21030 PF00072 Response regulator receiver domain AM341_RS21030 PF00196 Bacterial regulatory proteins, luxR family AM341_RS21035 PF00529 HlyD membrane-fusion protein of T1SS AM341_RS21035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM341_RS21040 PF07690 Major Facilitator Superfamily AM341_RS21045 PF00291 Pyridoxal-phosphate dependent enzyme AM341_RS21055 PF00356 Bacterial regulatory proteins, lacI family AM341_RS21055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM341_RS21060 PF08244 Glycosyl hydrolases family 32 C terminal AM341_RS21060 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM341_RS21065 PF00294 pfkB family carbohydrate kinase AM341_RS21070 PF01306 LacY proton/sugar symporter AM341_RS21080 PF01226 Formate/nitrite transporter AM341_RS21090 PF04333 MlaA lipoprotein AM341_RS21105 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM341_RS21115 PF04175 Protein of unknown function (DUF406) AM341_RS21120 PF00108 Thiolase, N-terminal domain AM341_RS21120 PF02803 Thiolase, C-terminal domain AM341_RS21125 PF00378 Enoyl-CoA hydratase/isomerase AM341_RS21125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM341_RS21125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM341_RS21130 PF00300 Histidine phosphatase superfamily (branch 1) AM341_RS21135 PF00419 Fimbrial protein AM341_RS21140 PF13953 PapC C-terminal domain AM341_RS21140 PF00577 Outer membrane usher protein AM341_RS21140 PF13954 PapC N-terminal domain AM341_RS21145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS21145 PF02753 Pili assembly chaperone PapD, C-terminal domain AM341_RS21150 PF00419 Fimbrial protein AM341_RS21155 PF00419 Fimbrial protein AM341_RS21160 PF00419 Fimbrial protein AM341_RS21165 PF11245 Protein of unknown function (DUF2544) AM341_RS21170 PF01713 Smr domain AM341_RS21175 PF05175 Methyltransferase small domain AM341_RS21180 PF01264 Chorismate synthase AM341_RS21185 PF03411 Penicillin-insensitive murein endopeptidase AM341_RS21190 PF01925 Sulfite exporter TauE/SafE AM341_RS21195 PF04315 Elongation factor P hydroxylase AM341_RS21200 PF08891 YfcL protein AM341_RS21205 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM341_RS21205 PF01266 FAD dependent oxidoreductase AM341_RS21210 PF02801 Beta-ketoacyl synthase, C-terminal domain AM341_RS21210 PF00109 Beta-ketoacyl synthase, N-terminal domain AM341_RS21220 PF07690 Major Facilitator Superfamily AM341_RS21230 PF11890 Domain of unknown function (DUF3410) AM341_RS21230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM341_RS21230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM341_RS21235 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM341_RS21235 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM341_RS21240 PF01416 tRNA pseudouridine synthase AM341_RS21245 PF09335 SNARE associated Golgi protein AM341_RS21250 PF01039 Carboxyl transferase domain AM341_RS21250 PF17848 Acetyl-coA carboxylase zinc finger domain AM341_RS21255 PF08245 Mur ligase middle domain AM341_RS21255 PF02875 Mur ligase family, glutamate ligase domain AM341_RS21260 PF05036 Sporulation related domain AM341_RS21265 PF02674 Colicin V production protein AM341_RS21270 PF00156 Phosphoribosyl transferase domain AM341_RS21275 PF02441 Flavoprotein AM341_RS21280 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS21285 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS21290 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS21295 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS21300 PF00005 ABC transporter AM341_RS21305 PF04754 Putative transposase, YhgA-like AM341_RS21310 PF08338 Domain of unknown function (DUF1731) AM341_RS21310 PF01370 NAD dependent epimerase/dehydratase family AM341_RS21315 PF02152 Dihydroneopterin aldolase AM341_RS21320 PF02798 Glutathione S-transferase, N-terminal domain AM341_RS21320 PF00043 Glutathione S-transferase, C-terminal domain AM341_RS21325 PF02798 Glutathione S-transferase, N-terminal domain AM341_RS21325 PF14834 Glutathione S-transferase, C-terminal domain AM341_RS21330 PF12850 Calcineurin-like phosphoesterase superfamily domain AM341_RS21335 PF00293 NUDIX domain AM341_RS21340 PF03606 C4-dicarboxylate anaerobic carrier AM341_RS21345 PF01515 Phosphate acetyl/butaryl transferase AM341_RS21345 PF07085 DRTGG domain AM341_RS21350 PF00871 Acetokinase family AM341_RS21355 PF04217 Protein of unknown function, DUF412 AM341_RS21360 PF03887 YfbU domain AM341_RS21365 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS21370 PF02080 TrkA-C domain AM341_RS21370 PF03600 Citrate transporter AM341_RS21380 PF00155 Aminotransferase class I and II AM341_RS21390 PF03466 LysR substrate binding domain AM341_RS21390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS21395 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM341_RS21400 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM341_RS21405 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM341_RS21405 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM341_RS21415 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM341_RS21415 PF10531 SLBB domain AM341_RS21415 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM341_RS21420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM341_RS21420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM341_RS21420 PF00384 Molybdopterin oxidoreductase AM341_RS21420 PF01568 Molydopterin dinucleotide binding domain AM341_RS21425 PF00146 NADH dehydrogenase AM341_RS21430 PF12838 4Fe-4S dicluster domain AM341_RS21435 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM341_RS21440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM341_RS21445 PF00361 Proton-conducting membrane transporter AM341_RS21445 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM341_RS21450 PF00361 Proton-conducting membrane transporter AM341_RS21455 PF00361 Proton-conducting membrane transporter AM341_RS21475 PF08974 Domain of unknown function (DUF1877) AM341_RS21480 PF04389 Peptidase family M28 AM341_RS21485 PF12450 von Willebrand factor AM341_RS21485 PF00092 von Willebrand factor type A domain AM341_RS21485 PF12034 Domain of unknown function (DUF3520) AM341_RS21490 PF02902 Ulp1 protease family, C-terminal catalytic domain AM341_RS21495 PF12706 Beta-lactamase superfamily domain AM341_RS21500 PF13673 Acetyltransferase (GNAT) domain AM341_RS21505 PF05957 Bacterial protein of unknown function (DUF883) AM341_RS21510 PF00425 chorismate binding enzyme AM341_RS21515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM341_RS21515 PF16582 Middle domain of thiamine pyrophosphate AM341_RS21515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM341_RS21520 PF12697 Alpha/beta hydrolase family AM341_RS21525 PF00378 Enoyl-CoA hydratase/isomerase AM341_RS21530 PF13378 Enolase C-terminal domain-like AM341_RS21535 PF13193 AMP-binding enzyme C-terminal domain AM341_RS21535 PF00501 AMP-binding enzyme AM341_RS21550 PF00892 EamA-like transporter family AM341_RS21555 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM341_RS21560 PF01522 Polysaccharide deacetylase AM341_RS21565 PF00551 Formyl transferase AM341_RS21565 PF02911 Formyl transferase, C-terminal domain AM341_RS21565 PF01370 NAD dependent epimerase/dehydratase family AM341_RS21570 PF00535 Glycosyl transferase family 2 AM341_RS21575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM341_RS21580 PF00300 Histidine phosphatase superfamily (branch 1) AM341_RS21585 PF00293 NUDIX domain AM341_RS21590 PF07437 YfaZ precursor AM341_RS21595 PF00994 Probable molybdopterin binding domain AM341_RS21605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM341_RS21605 PF13378 Enolase C-terminal domain-like AM341_RS21610 PF07690 Major Facilitator Superfamily AM341_RS21615 PF03328 HpcH/HpaI aldolase/citrate lyase family AM341_RS21625 PF04754 Putative transposase, YhgA-like AM341_RS21630 PF13183 4Fe-4S dicluster domain AM341_RS21630 PF02754 Cysteine-rich domain AM341_RS21635 PF00890 FAD binding domain AM341_RS21640 PF01266 FAD dependent oxidoreductase AM341_RS21640 PF04324 BFD-like [2Fe-2S] binding domain AM341_RS21645 PF07690 Major Facilitator Superfamily AM341_RS21650 PF03009 Glycerophosphoryl diester phosphodiesterase family AM341_RS21665 PF00111 2Fe-2S iron-sulfur cluster binding domain AM341_RS21670 PF00268 Ribonucleotide reductase, small chain AM341_RS21675 PF03477 ATP cone domain AM341_RS21675 PF02867 Ribonucleotide reductase, barrel domain AM341_RS21675 PF00317 Ribonucleotide reductase, all-alpha domain AM341_RS21685 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) repeat AM341_RS21685 PF03797 Autotransporter beta-domain AM341_RS21685 PF12951 Passenger-associated-transport-repeat AM341_RS21695 PF03989 DNA gyrase C-terminal domain, beta-propeller AM341_RS21695 PF00521 DNA gyrase/topoisomerase IV, subunit A AM341_RS21700 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) AM341_RS21705 PF06672 Protein of unknown function (DUF1175) AM341_RS21710 PF00207 Alpha-2-macroglobulin family AM341_RS21710 PF07703 Alpha-2-macroglobulin bait region domain AM341_RS21710 PF01835 MG2 domain AM341_RS21715 PF10062 Predicted secreted protein (DUF2300) AM341_RS21715 PF08486 Stage II sporulation protein AM341_RS21720 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) AM341_RS21725 PF02803 Thiolase, C-terminal domain AM341_RS21725 PF00108 Thiolase, N-terminal domain AM341_RS21730 PF02667 Short chain fatty acid transporter AM341_RS21735 PF01144 Coenzyme A transferase AM341_RS21740 PF01144 Coenzyme A transferase AM341_RS21745 PF00158 Sigma-54 interaction domain AM341_RS21745 PF00072 Response regulator receiver domain AM341_RS21745 PF02954 Bacterial regulatory protein, Fis family AM341_RS21750 PF00989 PAS fold AM341_RS21750 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS21750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS21755 PF09456 RcsC Alpha-Beta-Loop (ABL) AM341_RS21755 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS21755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS21755 PF00072 Response regulator receiver domain AM341_RS21760 PF00072 Response regulator receiver domain AM341_RS21760 PF00196 Bacterial regulatory proteins, luxR family AM341_RS21765 PF01627 Hpt domain AM341_RS21765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS21765 PF16359 RcsD-ABL domain AM341_RS21780 PF00267 Gram-negative porin AM341_RS21785 PF02424 ApbE family AM341_RS21790 PF02805 Metal binding domain of Ada AM341_RS21790 PF12833 Helix-turn-helix domain AM341_RS21790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM341_RS21790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM341_RS21795 PF13532 2OG-Fe(II) oxygenase superfamily AM341_RS21800 PF00005 ABC transporter AM341_RS21805 PF06039 Malate:quinone oxidoreductase (Mqo) AM341_RS21810 PF03974 Ecotin AM341_RS21820 PF00037 4Fe-4S binding domain AM341_RS21820 PF12800 4Fe-4S binding domain AM341_RS21820 PF13187 4Fe-4S dicluster domain AM341_RS21825 PF03927 NapD protein AM341_RS21830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM341_RS21830 PF00384 Molybdopterin oxidoreductase AM341_RS21830 PF01568 Molydopterin dinucleotide binding domain AM341_RS21835 PF12800 4Fe-4S binding domain AM341_RS21835 PF12838 4Fe-4S dicluster domain AM341_RS21840 PF12801 4Fe-4S binding domain AM341_RS21840 PF13237 4Fe-4S dicluster domain AM341_RS21845 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AM341_RS21850 PF03264 NapC/NirT cytochrome c family, N-terminal region AM341_RS21855 PF00005 ABC transporter AM341_RS21860 PF03379 CcmB protein AM341_RS21865 PF01578 Cytochrome C assembly protein AM341_RS21870 PF04995 Heme exporter protein D (CcmD) AM341_RS21875 PF03100 CcmE AM341_RS21880 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM341_RS21880 PF01578 Cytochrome C assembly protein AM341_RS21885 PF08534 Redoxin AM341_RS21890 PF03918 Cytochrome C biogenesis protein AM341_RS21895 PF00072 Response regulator receiver domain AM341_RS21895 PF00196 Bacterial regulatory proteins, luxR family AM341_RS21905 PF03797 Autotransporter beta-domain AM341_RS21905 PF03212 Pertactin AM341_RS21905 PF16168 Adhesin of bacterial autotransporter system, probable stalk AM341_RS21920 PF00884 Sulfatase AM341_RS21920 PF11893 Domain of unknown function (DUF3413) AM341_RS21925 PF07208 Protein of unknown function (DUF1414) AM341_RS21930 PF04245 37-kD nucleoid-associated bacterial protein AM341_RS21935 PF01386 Ribosomal L25p family AM341_RS21940 PF00271 Helicase conserved C-terminal domain AM341_RS21940 PF04851 Type III restriction enzyme, res subunit AM341_RS21950 PF00849 RNA pseudouridylate synthase AM341_RS21950 PF01479 S4 domain AM341_RS21955 PF07690 Major Facilitator Superfamily AM341_RS21965 PF13989 YejG-like protein AM341_RS21970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM341_RS21970 PF00005 ABC transporter AM341_RS21975 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS21975 PF12911 N-terminal TM domain of oligopeptide transport permease C AM341_RS21980 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS21985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM341_RS21990 PF00563 EAL domain AM341_RS21990 PF12792 CSS motif domain associated with EAL AM341_RS21995 PF00877 NlpC/P60 family AM341_RS22000 PF01569 PAP2 superfamily AM341_RS22005 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM341_RS22005 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM341_RS22010 PF01232 Mannitol dehydrogenase Rossmann domain AM341_RS22010 PF08125 Mannitol dehydrogenase C-terminal domain AM341_RS22015 PF08207 Elongation factor P (EF-P) KOW-like domain AM341_RS22015 PF01132 Elongation factor P (EF-P) OB domain AM341_RS22015 PF09285 Elongation factor P, C-terminal AM341_RS22020 PF03692 Putative zinc- or iron-chelating domain AM341_RS22025 PF07690 Major Facilitator Superfamily AM341_RS22030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM341_RS22030 PF00381 PTS HPr component phosphorylation site AM341_RS22035 PF00294 pfkB family carbohydrate kinase AM341_RS22040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS22040 PF02378 Phosphotransferase system, EIIC AM341_RS22045 PF00294 pfkB family carbohydrate kinase AM341_RS22050 PF04227 Indigoidine synthase A like protein AM341_RS22055 PF07662 Na+ dependent nucleoside transporter C-terminus AM341_RS22055 PF01773 Na+ dependent nucleoside transporter N-terminus AM341_RS22060 PF00027 Cyclic nucleotide-binding domain AM341_RS22065 PF01156 Inosine-uridine preferring nucleoside hydrolase AM341_RS22070 PF07662 Na+ dependent nucleoside transporter C-terminus AM341_RS22070 PF01773 Na+ dependent nucleoside transporter N-terminus AM341_RS22075 PF00294 pfkB family carbohydrate kinase AM341_RS22080 PF01261 Xylose isomerase-like TIM barrel AM341_RS22085 PF03601 Conserved hypothetical protein 698 AM341_RS22090 PF03466 LysR substrate binding domain AM341_RS22090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS22100 PF00324 Amino acid permease AM341_RS22110 PF07715 TonB-dependent Receptor Plug Domain AM341_RS22110 PF00593 TonB dependent receptor AM341_RS22115 PF00756 Putative esterase AM341_RS22130 PF01227 GTP cyclohydrolase I AM341_RS22135 PF04235 Protein of unknown function (DUF418) AM341_RS22145 PF00356 Bacterial regulatory proteins, lacI family AM341_RS22150 PF13407 Periplasmic binding protein domain AM341_RS22155 PF00005 ABC transporter AM341_RS22160 PF02653 Branched-chain amino acid transport system / permease component AM341_RS22165 PF01180 Dihydroorotate dehydrogenase AM341_RS22170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM341_RS22170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM341_RS22175 PF10808 Protein of unknown function (DUF2542) AM341_RS22180 PF02698 DUF218 domain AM341_RS22185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM341_RS22185 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AM341_RS22190 PF04172 LrgB-like family AM341_RS22195 PF03788 LrgA family AM341_RS22200 PF01207 Dihydrouridine synthase (Dus) AM341_RS22220 PF02321 Outer membrane efflux protein AM341_RS22230 PF09335 SNARE associated Golgi protein AM341_RS22235 PF04893 Yip1 domain AM341_RS22240 PF00768 D-alanyl-D-alanine carboxypeptidase AM341_RS22245 PF09330 D-lactate dehydrogenase, membrane binding AM341_RS22245 PF01565 FAD binding domain AM341_RS22250 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM341_RS22250 PF00933 Glycosyl hydrolase family 3 N terminal domain AM341_RS22250 PF14310 Fibronectin type III-like domain AM341_RS22255 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM341_RS22260 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS22265 PF00005 ABC transporter AM341_RS22270 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS22280 PF13411 MerR HTH family regulatory protein AM341_RS22285 PF06580 Histidine kinase AM341_RS22285 PF07694 5TMR of 5TMR-LYT AM341_RS22290 PF00072 Response regulator receiver domain AM341_RS22290 PF04397 LytTr DNA-binding domain AM341_RS22295 PF07308 Protein of unknown function (DUF1456) AM341_RS22300 PF06998 Protein of unknown function (DUF1307) AM341_RS22305 PF04434 SWIM zinc finger AM341_RS22310 PF05762 VWA domain containing CoxE-like protein AM341_RS22320 PF07728 AAA domain (dynein-related subfamily) AM341_RS22330 PF13569 Domain of unknown function (DUF4132) AM341_RS22340 PF01588 Putative tRNA binding domain AM341_RS22340 PF09334 tRNA synthetases class I (M) AM341_RS22345 PF10609 NUBPL iron-transfer P-loop NTPase AM341_RS22350 PF10836 Protein of unknown function (DUF2574) AM341_RS22360 PF00419 Fimbrial protein AM341_RS22365 PF02753 Pili assembly chaperone PapD, C-terminal domain AM341_RS22365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM341_RS22370 PF13954 PapC N-terminal domain AM341_RS22370 PF13953 PapC C-terminal domain AM341_RS22370 PF00577 Outer membrane usher protein AM341_RS22375 PF00419 Fimbrial protein AM341_RS22380 PF11776 Nickel/cobalt transporter regulator AM341_RS22385 PF03824 High-affinity nickel-transport protein AM341_RS22390 PF02583 Metal-sensitive transcriptional repressor AM341_RS22395 PF02110 Hydroxyethylthiazole kinase family AM341_RS22400 PF08543 Phosphomethylpyrimidine kinase AM341_RS22405 PF01183 Glycosyl hydrolases family 25 AM341_RS22410 PF00392 Bacterial regulatory proteins, gntR family AM341_RS22410 PF07702 UTRA domain AM341_RS22415 PF00294 pfkB family carbohydrate kinase AM341_RS22420 PF03747 ADP-ribosylglycohydrolase AM341_RS22425 PF03825 Nucleoside H+ symporter AM341_RS22430 PF01791 DeoC/LacD family aldolase AM341_RS22435 PF07690 Major Facilitator Superfamily AM341_RS22440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS22440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS22445 PF00106 short chain dehydrogenase AM341_RS22450 PF00356 Bacterial regulatory proteins, lacI family AM341_RS22455 PF04198 Putative sugar-binding domain AM341_RS22460 PF08125 Mannitol dehydrogenase C-terminal domain AM341_RS22460 PF01232 Mannitol dehydrogenase Rossmann domain AM341_RS22465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM341_RS22465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM341_RS22470 PF07690 Major Facilitator Superfamily AM341_RS22475 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS22480 PF00781 Diacylglycerol kinase catalytic domain AM341_RS22495 PF01136 Peptidase family U32 AM341_RS22495 PF16325 Peptidase family U32 C-terminal domain AM341_RS22500 PF07411 Domain of unknown function (DUF1508) AM341_RS22505 PF00486 Transcriptional regulatory protein, C terminal AM341_RS22505 PF00072 Response regulator receiver domain AM341_RS22510 PF00672 HAMP domain AM341_RS22510 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS22510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS22515 PF07690 Major Facilitator Superfamily AM341_RS22520 PF00873 AcrB/AcrD/AcrF family AM341_RS22525 PF00873 AcrB/AcrD/AcrF family AM341_RS22530 PF13533 Biotin-lipoyl like AM341_RS22540 PF00092 von Willebrand factor type A domain AM341_RS22550 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) AM341_RS22560 PF00012 Hsp70 protein AM341_RS22565 PF06029 AlkA N-terminal domain AM341_RS22565 PF00730 HhH-GPD superfamily base excision DNA repair protein AM341_RS22570 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS22570 PF08448 PAS fold AM341_RS22570 PF13426 PAS domain AM341_RS22570 PF00563 EAL domain AM341_RS22570 PF08447 PAS fold AM341_RS22570 PF05231 MASE1 AM341_RS22575 PF00485 Phosphoribulokinase / Uridine kinase family AM341_RS22580 PF00692 dUTPase AM341_RS22585 PF05170 AsmA family AM341_RS22600 PF03471 Transporter associated domain AM341_RS22600 PF00571 CBS domain AM341_RS22600 PF03741 Integral membrane protein TerC family AM341_RS22610 PF01569 PAP2 superfamily AM341_RS22625 PF14052 Capsule assembly protein Wzi AM341_RS22630 PF10531 SLBB domain AM341_RS22630 PF02563 Polysaccharide biosynthesis/export protein AM341_RS22630 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM341_RS22635 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM341_RS22640 PF13807 G-rich domain on putative tyrosine kinase AM341_RS22640 PF02706 Chain length determinant protein AM341_RS22640 PF13614 AAA domain AM341_RS22645 PF02397 Bacterial sugar transferase AM341_RS22650 PF00535 Glycosyl transferase family 2 AM341_RS22685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM341_RS22685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM341_RS22700 PF16363 GDP-mannose 4,6 dehydratase AM341_RS22705 PF00483 Nucleotidyl transferase AM341_RS22710 PF04321 RmlD substrate binding domain AM341_RS22715 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AM341_RS22720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM341_RS22720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM341_RS22720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM341_RS22750 PF00005 ABC transporter AM341_RS22755 PF13847 Methyltransferase domain AM341_RS22755 PF00069 Protein kinase domain AM341_RS22760 PF13439 Glycosyltransferase Family 4 AM341_RS22760 PF00534 Glycosyl transferases group 1 AM341_RS22765 PF00534 Glycosyl transferases group 1 AM341_RS22765 PF00862 Sucrose synthase AM341_RS22775 PF01502 Phosphoribosyl-AMP cyclohydrolase AM341_RS22775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM341_RS22780 PF00977 Histidine biosynthesis protein AM341_RS22785 PF00977 Histidine biosynthesis protein AM341_RS22790 PF00117 Glutamine amidotransferase class-I AM341_RS22795 PF00475 Imidazoleglycerol-phosphate dehydratase AM341_RS22795 PF08645 Polynucleotide kinase 3 phosphatase AM341_RS22800 PF00155 Aminotransferase class I and II AM341_RS22805 PF00815 Histidinol dehydrogenase AM341_RS22810 PF01634 ATP phosphoribosyltransferase AM341_RS22810 PF08029 HisG, C-terminal domain AM341_RS22825 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AM341_RS22830 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AM341_RS22835 PF01370 NAD dependent epimerase/dehydratase family AM341_RS22840 PF03466 LysR substrate binding domain AM341_RS22840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS22850 PF13520 Amino acid permease AM341_RS22855 PF04143 Sulphur transport AM341_RS22860 PF01206 Sulfurtransferase TusA AM341_RS22865 PF00929 Exonuclease AM341_RS22865 PF08411 Exonuclease C-terminal AM341_RS22870 PF00768 D-alanyl-D-alanine carboxypeptidase AM341_RS22870 PF07943 Penicillin-binding protein 5, C-terminal domain AM341_RS22875 PF13542 Helix-turn-helix domain of transposase family ISL3 AM341_RS22875 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AM341_RS22875 PF01610 Transposase AM341_RS22880 PF06445 GyrI-like small molecule binding domain AM341_RS22885 PF04632 Fusaric acid resistance protein family AM341_RS22890 PF04363 Protein of unknown function (DUF496) AM341_RS22895 PF10662 Ethanolamine utilisation - propanediol utilisation AM341_RS22910 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM341_RS22915 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM341_RS22920 PF06174 Protein of unknown function (DUF987) AM341_RS22925 PF04002 RadC-like JAB domain AM341_RS22930 PF03230 Antirestriction protein AM341_RS22935 PF06067 Domain of unknown function (DUF932) AM341_RS22965 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM341_RS22970 PF02654 Cobalamin-5-phosphate synthase AM341_RS22975 PF02277 Phosphoribosyltransferase AM341_RS22980 PF17969 L,D-transpeptidase C-terminal domain AM341_RS22980 PF03734 L,D-transpeptidase catalytic domain AM341_RS23060 PF04002 RadC-like JAB domain AM341_RS23105 PF00437 Type II/IV secretion system protein AM341_RS23110 PF03743 Bacterial conjugation TrbI-like protein AM341_RS23115 PF03524 Conjugal transfer protein AM341_RS23140 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AM341_RS23145 PF04956 TrbC/VIRB2 family AM341_RS23190 PF07715 TonB-dependent Receptor Plug Domain AM341_RS23190 PF00593 TonB dependent receptor AM341_RS23195 PF00501 AMP-binding enzyme AM341_RS23195 PF13193 AMP-binding enzyme C-terminal domain AM341_RS23200 PF00975 Thioesterase domain AM341_RS23210 PF02801 Beta-ketoacyl synthase, C-terminal domain AM341_RS23210 PF00698 Acyl transferase domain AM341_RS23210 PF00109 Beta-ketoacyl synthase, N-terminal domain AM341_RS23210 PF16197 Ketoacyl-synthetase C-terminal extension AM341_RS23210 PF00668 Condensation domain AM341_RS23210 PF00550 Phosphopantetheine attachment site AM341_RS23215 PF00501 AMP-binding enzyme AM341_RS23215 PF00668 Condensation domain AM341_RS23215 PF08242 Methyltransferase domain AM341_RS23215 PF00550 Phosphopantetheine attachment site AM341_RS23225 PF00005 ABC transporter AM341_RS23225 PF08021 Siderophore-interacting FAD-binding domain AM341_RS23225 PF04954 Siderophore-interacting protein AM341_RS23225 PF00664 ABC transporter transmembrane region AM341_RS23230 PF00005 ABC transporter AM341_RS23230 PF00664 ABC transporter transmembrane region AM341_RS23235 PF07690 Major Facilitator Superfamily AM341_RS23240 PF00425 chorismate binding enzyme AM341_RS23245 PF13356 Arm DNA-binding domain AM341_RS23245 PF00589 Phage integrase family AM341_RS23255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS23255 PF03466 LysR substrate binding domain AM341_RS23260 PF03466 LysR substrate binding domain AM341_RS23260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS23270 PF01554 MatE AM341_RS23285 PF01709 Transcriptional regulator AM341_RS23290 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM341_RS23290 PF01048 Phosphorylase superfamily AM341_RS23295 PF07690 Major Facilitator Superfamily AM341_RS23295 PF00083 Sugar (and other) transporter AM341_RS23305 PF11924 Inverse autotransporter, beta-domain AM341_RS23305 PF02369 Bacterial Ig-like domain (group 1) AM341_RS23305 PF09134 Invasin, domain 3 AM341_RS23315 PF06167 Glucose-regulated metallo-peptidase M90 AM341_RS23330 PF01292 Prokaryotic cytochrome b561 AM341_RS23335 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM341_RS23340 PF01794 Ferric reductase like transmembrane component AM341_RS23345 PF00174 Oxidoreductase molybdopterin binding domain AM341_RS23350 PF00576 HIUase/Transthyretin family AM341_RS23355 PF00072 Response regulator receiver domain AM341_RS23355 PF00486 Transcriptional regulatory protein, C terminal AM341_RS23360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS23360 PF00512 His Kinase A (phospho-acceptor) domain AM341_RS23375 PF00267 Gram-negative porin AM341_RS23385 PF01966 HD domain AM341_RS23390 PF18284 DNA methylase N-terminal domain AM341_RS23390 PF00145 C-5 cytosine-specific DNA methylase AM341_RS23395 PF03852 DNA mismatch endonuclease Vsr AM341_RS23400 PF00892 EamA-like transporter family AM341_RS23405 PF05661 Protein of unknown function (DUF808) AM341_RS23410 PF09926 Uncharacterized small protein (DUF2158) AM341_RS23430 PF10733 Protein of unknown function (DUF2525) AM341_RS23435 PF10781 Dextransucrase DSRB AM341_RS23440 PF00196 Bacterial regulatory proteins, luxR family AM341_RS23445 PF01311 Bacterial export proteins, family 1 AM341_RS23450 PF01313 Bacterial export proteins, family 3 AM341_RS23455 PF00813 FliP family AM341_RS23460 PF04347 Flagellar biosynthesis protein, FliO AM341_RS23465 PF16973 Flagellar motor switch protein FliN N-terminal AM341_RS23465 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM341_RS23470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM341_RS23470 PF02154 Flagellar motor switch protein FliM AM341_RS23475 PF03748 Flagellar basal body-associated protein FliL AM341_RS23480 PF02120 Flagellar hook-length control protein FliK AM341_RS23485 PF02050 Flagellar FliJ protein AM341_RS23490 PF18269 T3SS EscN ATPase C-terminal domain AM341_RS23490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM341_RS23495 PF02108 Flagellar assembly protein FliH AM341_RS23500 PF14842 FliG N-terminal domain AM341_RS23500 PF14841 FliG middle domain AM341_RS23500 PF01706 FliG C-terminal domain AM341_RS23505 PF08345 Flagellar M-ring protein C-terminal AM341_RS23505 PF01514 Secretory protein of YscJ/FliF family AM341_RS23510 PF02049 Flagellar hook-basal body complex protein FliE AM341_RS23520 PF17607 Family of unknown function (DUF5503) AM341_RS23530 PF02586 SOS response associated peptidase (SRAP) AM341_RS23535 PF01206 Sulfurtransferase TusA AM341_RS23540 PF04143 Sulphur transport AM341_RS23550 PF13987 YedD-like protein AM341_RS23555 PF00128 Alpha amylase, catalytic domain AM341_RS23555 PF02806 Alpha amylase, C-terminal all-beta domain AM341_RS23560 PF05400 Flagellar protein FliT AM341_RS23565 PF02561 Flagellar protein FliS AM341_RS23570 PF02465 Flagellar hook-associated protein 2 N-terminus AM341_RS23570 PF07195 Flagellar hook-associated protein 2 C-terminus AM341_RS23580 PF00700 Bacterial flagellin C-terminal helical region AM341_RS23580 PF12445 Flagellin protein AM341_RS23580 PF00669 Bacterial flagellin N-terminal helical region AM341_RS23585 PF04545 Sigma-70, region 4 AM341_RS23585 PF04542 Sigma-70 region 2 AM341_RS23585 PF04539 Sigma-70 region 3 AM341_RS23590 PF02899 Phage integrase, N-terminal SAM-like domain AM341_RS23595 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM341_RS23600 PF00291 Pyridoxal-phosphate dependent enzyme AM341_RS23605 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS23610 PF00005 ABC transporter AM341_RS23615 PF03472 Autoinducer binding domain AM341_RS23615 PF00196 Bacterial regulatory proteins, luxR family AM341_RS23620 PF10769 Protein of unknown function (DUF2594) AM341_RS23630 PF00196 Bacterial regulatory proteins, luxR family AM341_RS23630 PF00072 Response regulator receiver domain AM341_RS23635 PF08459 UvrC Helix-hairpin-helix N-terminal AM341_RS23635 PF01541 GIY-YIG catalytic domain AM341_RS23635 PF02151 UvrB/uvrC motif AM341_RS23640 PF01066 CDP-alcohol phosphatidyltransferase AM341_RS23660 PF02810 SEC-C motif AM341_RS23660 PF03695 Uncharacterised protein family (UPF0149) AM341_RS23665 PF03222 Tryptophan/tyrosine permease family AM341_RS23670 PF10678 Protein of unknown function (DUF2492) AM341_RS23675 PF00210 Ferritin-like domain AM341_RS23680 PF13992 YecR-like lipoprotein AM341_RS23690 PF10964 Protein of unknown function (DUF2766) AM341_RS23695 PF00210 Ferritin-like domain AM341_RS23705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM341_RS23710 PF00005 ABC transporter AM341_RS23715 PF02653 Branched-chain amino acid transport system / permease component AM341_RS23720 PF02358 Trehalose-phosphatase AM341_RS23725 PF00982 Glycosyltransferase family 20 AM341_RS23730 PF00582 Universal stress protein family AM341_RS23735 PF05247 Flagellar transcriptional activator (FlhD) AM341_RS23740 PF05280 Flagellar transcriptional activator (FlhC) AM341_RS23745 PF01618 MotA/TolQ/ExbB proton channel family AM341_RS23750 PF00691 OmpA family AM341_RS23750 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM341_RS23755 PF01584 CheW-like domain AM341_RS23755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM341_RS23755 PF02895 Signal transducing histidine kinase, homodimeric domain AM341_RS23755 PF09078 CheY binding AM341_RS23755 PF01627 Hpt domain AM341_RS23760 PF01584 CheW-like domain AM341_RS23765 PF00672 HAMP domain AM341_RS23765 PF02203 Tar ligand binding domain homologue AM341_RS23765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM341_RS23770 PF02203 Tar ligand binding domain homologue AM341_RS23770 PF00672 HAMP domain AM341_RS23770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM341_RS23775 PF03705 CheR methyltransferase, all-alpha domain AM341_RS23775 PF01739 CheR methyltransferase, SAM binding domain AM341_RS23780 PF00072 Response regulator receiver domain AM341_RS23780 PF01339 CheB methylesterase AM341_RS23785 PF00072 Response regulator receiver domain AM341_RS23790 PF04344 Chemotaxis phosphatase, CheZ AM341_RS23795 PF01312 FlhB HrpN YscU SpaS Family AM341_RS23800 PF00771 FHIPEP family AM341_RS23805 PF06366 Flagellar protein FlhE AM341_RS23810 PF07007 Lysozyme inhibitor LprI AM341_RS23815 PF03485 Arginyl tRNA synthetase N terminal domain AM341_RS23815 PF05746 DALR anticodon binding domain AM341_RS23815 PF00750 tRNA synthetases class I (R) AM341_RS23825 PF06185 YecM protein AM341_RS23830 PF03932 CutC family AM341_RS23835 PF03264 NapC/NirT cytochrome c family, N-terminal region AM341_RS23840 PF00384 Molybdopterin oxidoreductase AM341_RS23840 PF18364 Molybdopterin oxidoreductase N-terminal domain AM341_RS23840 PF01568 Molydopterin dinucleotide binding domain AM341_RS23845 PF08003 Protein of unknown function (DUF1698) AM341_RS23850 PF13649 Methyltransferase domain AM341_RS23855 PF01124 MAPEG family AM341_RS23860 PF01904 Protein of unknown function DUF72 AM341_RS23865 PF00857 Isochorismatase family AM341_RS23870 PF02938 GAD domain AM341_RS23870 PF00152 tRNA synthetases class II (D, K and N) AM341_RS23870 PF01336 OB-fold nucleic acid binding domain AM341_RS23875 PF00293 NUDIX domain AM341_RS23880 PF01709 Transcriptional regulator AM341_RS23885 PF02075 Crossover junction endodeoxyribonuclease RuvC AM341_RS23890 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AM341_RS23900 PF07499 RuvA, C-terminal domain AM341_RS23900 PF01330 RuvA N terminal domain AM341_RS23905 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM341_RS23905 PF17864 RuvB AAA lid domain AM341_RS23905 PF05491 RuvB C-terminal winged helix domain AM341_RS23910 PF00950 ABC 3 transport family AM341_RS23915 PF00005 ABC transporter AM341_RS23920 PF01297 Zinc-uptake complex component A periplasmic AM341_RS23925 PF08525 Opacity-associated protein A N-terminal motif AM341_RS23925 PF01551 Peptidase family M23 AM341_RS23925 PF01476 LysM domain AM341_RS23930 PF03279 Bacterial lipid A biosynthesis acyltransferase AM341_RS23935 PF02887 Pyruvate kinase, alpha/beta domain AM341_RS23935 PF00224 Pyruvate kinase, barrel domain AM341_RS23940 PF01418 Helix-turn-helix domain, rpiR family AM341_RS23940 PF01380 SIS domain AM341_RS23945 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM341_RS23945 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM341_RS23950 PF00920 Dehydratase family AM341_RS23955 PF01081 KDPG and KHG aldolase AM341_RS23960 PF02222 ATP-grasp domain AM341_RS23965 PF07130 YebG protein AM341_RS23970 PF13995 YebF-like protein AM341_RS23975 PF04391 Protein of unknown function (DUF533) AM341_RS23980 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM341_RS23980 PF00326 Prolyl oligopeptidase family AM341_RS23985 PF00929 Exonuclease AM341_RS23990 PF00795 Carbon-nitrogen hydrolase AM341_RS23995 PF06440 DNA polymerase III, theta subunit AM341_RS24000 PF04234 CopC domain AM341_RS24005 PF05425 Copper resistance protein D AM341_RS24010 PF10709 Protein of unknown function (DUF2511) AM341_RS24015 PF00149 Calcineurin-like phosphoesterase AM341_RS24020 PF07358 Protein of unknown function (DUF1482) AM341_RS24025 PF07351 Protein of unknown function (DUF1480) AM341_RS24030 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AM341_RS24030 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AM341_RS24030 PF01189 16S rRNA methyltransferase RsmB/F AM341_RS24035 PF02470 MlaD protein AM341_RS24040 PF04403 Paraquat-inducible protein A AM341_RS24045 PF13185 GAF domain AM341_RS24050 PF17516 ProQ C-terminal domain AM341_RS24050 PF04352 ProQ/FINO family AM341_RS24055 PF17804 Tail specific protease N-terminal domain AM341_RS24055 PF00595 PDZ domain AM341_RS24055 PF03572 Peptidase family S41 AM341_RS24055 PF11818 C-terminal domain of tail specific protease (DUF3340) AM341_RS24060 PF01435 Peptidase family M48 AM341_RS24065 PF07690 Major Facilitator Superfamily AM341_RS24070 PF01614 Bacterial transcriptional regulator AM341_RS24070 PF09339 IclR helix-turn-helix domain AM341_RS24075 PF13996 YobH-like protein AM341_RS24080 PF13998 MgrB protein AM341_RS24085 PF13974 YebO-like protein AM341_RS24095 PF10736 Protein of unknown function (DUF2627) AM341_RS24100 PF00313 'Cold-shock' DNA-binding domain AM341_RS24105 PF13847 Methyltransferase domain AM341_RS24110 PF02659 Putative manganese efflux pump AM341_RS24120 PF06173 Protein of unknown function (DUF986) AM341_RS24125 PF03613 PTS system mannose/fructose/sorbose family IID component AM341_RS24130 PF03609 PTS system sorbose-specific iic component AM341_RS24135 PF03830 PTS system sorbose subfamily IIB component AM341_RS24135 PF03610 PTS system fructose IIA component AM341_RS24150 PF03741 Integral membrane protein TerC family AM341_RS24150 PF03471 Transporter associated domain AM341_RS24155 PF00563 EAL domain AM341_RS24155 PF12792 CSS motif domain associated with EAL AM341_RS24160 PF03313 Serine dehydratase alpha chain AM341_RS24160 PF03315 Serine dehydratase beta chain AM341_RS24165 PF00293 NUDIX domain AM341_RS24170 PF04715 Anthranilate synthase component I, N terminal region AM341_RS24170 PF00425 chorismate binding enzyme AM341_RS24175 PF03701 Uncharacterised protein family (UPF0181) AM341_RS24180 PF08986 Domain of unknown function (DUF1889) AM341_RS24185 PF01042 Endoribonuclease L-PSP AM341_RS24190 PF13307 Helicase C-terminal domain AM341_RS24190 PF04851 Type III restriction enzyme, res subunit AM341_RS24195 PF00814 Glycoprotease family AM341_RS24200 PF03843 Outer membrane lipoprotein Slp family AM341_RS24205 PF13193 AMP-binding enzyme C-terminal domain AM341_RS24205 PF00501 AMP-binding enzyme AM341_RS24210 PF01612 3'-5' exonuclease AM341_RS24210 PF00570 HRDC domain AM341_RS24215 PF00970 Oxidoreductase FAD-binding domain AM341_RS24215 PF00111 2Fe-2S iron-sulfur cluster binding domain AM341_RS24215 PF00175 Oxidoreductase NAD-binding domain AM341_RS24220 PF00355 Rieske [2Fe-2S] domain AM341_RS24220 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM341_RS24225 PF02028 BCCT, betaine/carnitine/choline family transporter AM341_RS24230 PF00180 Isocitrate/isopropylmalate dehydrogenase AM341_RS24235 PF03466 LysR substrate binding domain AM341_RS24235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM341_RS24240 PF01810 LysE type translocator AM341_RS24245 PF09313 Domain of unknown function (DUF1971) AM341_RS24250 PF08956 Domain of unknown function (DUF1869) AM341_RS24255 PF04226 Transglycosylase associated protein AM341_RS24270 PF13185 GAF domain AM341_RS24270 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS24275 PF03891 Domain of unknown function (DUF333) AM341_RS24280 PF04343 Protein of unknown function, DUF488 AM341_RS24285 PF07690 Major Facilitator Superfamily AM341_RS24290 PF02311 AraC-like ligand binding domain AM341_RS24290 PF12833 Helix-turn-helix domain AM341_RS24295 PF04284 Protein of unknown function (DUF441) AM341_RS24305 PF04073 Aminoacyl-tRNA editing domain AM341_RS24310 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS24310 PF17155 Gammaproteobacterial periplasmic sensor domain AM341_RS24315 PF17158 Membrane-associated sensor, integral membrane domain AM341_RS24315 PF00990 Diguanylate cyclase, GGDEF domain AM341_RS24325 PF06798 PrkA serine protein kinase C-terminal domain AM341_RS24325 PF08298 PrkA AAA domain AM341_RS24330 PF06629 MltA-interacting protein MipA AM341_RS24335 PF00248 Aldo/keto reductase family AM341_RS24340 PF01263 Aldose 1-epimerase AM341_RS24345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM341_RS24345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM341_RS24350 PF01641 SelR domain AM341_RS24355 PF07023 Protein of unknown function (DUF1315) AM341_RS24360 PF00107 Zinc-binding dehydrogenase AM341_RS24360 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS24365 PF00083 Sugar (and other) transporter AM341_RS24370 PF00107 Zinc-binding dehydrogenase AM341_RS24370 PF08240 Alcohol dehydrogenase GroES-like domain AM341_RS24375 PF01116 Fructose-bisphosphate aldolase class-II AM341_RS24380 PF00294 pfkB family carbohydrate kinase AM341_RS24385 PF00248 Aldo/keto reductase family AM341_RS24390 PF00455 DeoR C terminal sensor domain AM341_RS24390 PF08220 DeoR-like helix-turn-helix domain AM341_RS24395 PF00083 Sugar (and other) transporter AM341_RS24400 PF00857 Isochorismatase family AM341_RS24405 PF00710 Asparaginase, N-terminal AM341_RS24405 PF17763 Glutaminase/Asparaginase C-terminal domain AM341_RS24410 PF01343 Peptidase family S49 AM341_RS24420 PF00881 Nitroreductase family AM341_RS24430 PF02769 AIR synthase related protein, C-terminal domain AM341_RS24430 PF00586 AIR synthase related protein, N-terminal domain AM341_RS24435 PF01751 Toprim domain AM341_RS24435 PF01131 DNA topoisomerase AM341_RS24440 PF06889 Protein of unknown function (DUF1266) AM341_RS24445 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM341_RS24445 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM341_RS24450 PF07383 Protein of unknown function (DUF1496) AM341_RS24455 PF00293 NUDIX domain AM341_RS24460 PF01066 CDP-alcohol phosphatidyltransferase AM341_RS24465 PF00581 Rhodanese-like domain AM341_RS24470 PF00005 ABC transporter AM341_RS24475 PF00528 Binding-protein-dependent transport system inner membrane component AM341_RS24480 PF13416 Bacterial extracellular solute-binding protein AM341_RS24485 PF02627 Carboxymuconolactone decarboxylase family AM341_RS24490 PF09335 SNARE associated Golgi protein AM341_RS24500 PF09335 SNARE associated Golgi protein AM341_RS24505 PF03372 Endonuclease/Exonuclease/phosphatase family AM341_RS24515 PF00202 Aminotransferase class-III AM341_RS24520 PF04958 Arginine N-succinyltransferase beta subunit AM341_RS24525 PF00171 Aldehyde dehydrogenase family AM341_RS24530 PF04996 Succinylarginine dihydrolase AM341_RS24535 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM341_RS24540 PF07813 LTXXQ motif family protein AM341_RS24545 PF05962 HutD AM341_RS24555 PF02540 NAD synthase AM341_RS24560 PF04355 SmpA / OmlA family AM341_RS24570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM341_RS24575 PF02378 Phosphotransferase system, EIIC AM341_RS24580 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM341_RS24585 PF12833 Helix-turn-helix domain AM341_RS24585 PF07883 Cupin domain AM341_RS24590 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM341_RS24590 PF02056 Family 4 glycosyl hydrolase AM341_RS24595 PF04794 YdjC-like protein AM341_RS24600 PF06628 Catalase-related immune-responsive AM341_RS24600 PF00199 Catalase AM341_RS24600 PF18011 C-terminal domain found in long catalases AM341_RS24605 PF10729 Cell division activator CedA AM341_RS24615 PF00375 Sodium:dicarboxylate symporter family AM341_RS24620 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM341_RS24625 PF13419 Haloacid dehalogenase-like hydrolase AM341_RS24630 PF14002 YniB-like protein AM341_RS24635 PF03881 Fructosamine kinase AM341_RS24640 PF11080 Endoribonuclease GhoS AM341_RS24645 PF00294 pfkB family carbohydrate kinase AM341_RS24650 PF04338 Protein of unknown function, DUF481 AM341_RS24660 PF07906 ShET2 enterotoxin, N-terminal region AM341_RS24670 PF03129 Anticodon binding domain AM341_RS24670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM341_RS24670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM341_RS24670 PF02824 TGS domain AM341_RS24675 PF05198 Translation initiation factor IF-3, N-terminal domain AM341_RS24675 PF00707 Translation initiation factor IF-3, C-terminal domain AM341_RS24680 PF01632 Ribosomal protein L35 AM341_RS24685 PF00453 Ribosomal protein L20 AM341_RS24690 PF01409 tRNA synthetases class II core domain (F) AM341_RS24690 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM341_RS24695 PF03483 B3/4 domain AM341_RS24695 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM341_RS24695 PF01588 Putative tRNA binding domain AM341_RS24695 PF03147 Ferredoxin-fold anticodon binding domain AM341_RS24695 PF03484 tRNA synthetase B5 domain AM341_RS24700 PF00216 Bacterial DNA-binding protein AM341_RS24705 PF01032 FecCD transport family AM341_RS24710 PF00255 Glutathione peroxidase AM341_RS24715 PF00005 ABC transporter AM341_RS24720 PF00877 NlpC/P60 family AM341_RS24725 PF00563 EAL domain AM341_RS24735 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) AM341_RS24740 PF13728 F plasmid transfer operon protein AM341_RS24755 PF06122 Conjugative relaxosome accessory transposon protein AM341_RS24760 PF07916 TraG-like protein, N-terminal region AM341_RS24770 PF05818 Enterobacterial TraT complement resistance protein AM341_RS24775 PF10412 Type IV secretion-system coupling protein DNA-binding domain AM341_RS24775 PF12615 F sex factor protein N terminal AM341_RS24780 PF08751 TrwC relaxase AM341_RS24780 PF18340 DNA relaxase TraI 2B/2B-like domain AM341_RS24780 PF18272 single-stranded DNA binding TraI N-terminal subdomain AM341_RS24780 PF07057 DNA helicase TraI AM341_RS24785 PF05857 TraX protein AM341_RS24790 PF12602 Fertility inhibition protein N terminal AM341_RS24790 PF04352 ProQ/FINO family AM341_RS24805 PF03400 IS1 transposase AM341_RS24810 PF00665 Integrase core domain AM341_RS24810 PF13276 HTH-like domain AM341_RS24810 PF01527 Transposase AM341_RS24815 PF05717 IS66 Orf2 like protein AM341_RS24820 PF13007 Transposase C of IS166 homeodomain AM341_RS24820 PF13005 zinc-finger binding domain of transposase IS66 AM341_RS24820 PF13817 IS66 C-terminal element AM341_RS24820 PF03050 Transposase IS66 family AM341_RS24845 PF01848 Hok/gef family AM341_RS24850 PF10723 Replication regulatory protein RepB AM341_RS24860 PF08048 Tap RepA1 leader peptide AM341_RS24880 PF00696 Amino acid kinase family AM341_RS24885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM341_RS24885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM341_RS24890 PF03606 C4-dicarboxylate anaerobic carrier AM341_RS24895 PF02863 Arginine repressor, C-terminal domain AM341_RS24895 PF01316 Arginine repressor, DNA binding domain AM341_RS24910 PF05717 IS66 Orf2 like protein AM341_RS24940 PF01548 Transposase AM341_RS24940 PF02371 Transposase IS116/IS110/IS902 family AM341_RS24950 PF10723 Replication regulatory protein RepB AM341_RS24960 PF08048 Tap RepA1 leader peptide AM341_RS24965 PF02387 IncFII RepA protein family AM341_RS24975 PF02517 CPBP intramembrane metalloprotease AM341_RS24980 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AM341_RS24985 PF13700 Domain of unknown function (DUF4158) AM341_RS24985 PF01526 Tn3 transposase DDE domain AM341_RS24990 PF00239 Resolvase, N terminal domain AM341_RS24990 PF02796 Helix-turn-helix domain of resolvase AM341_RS25005 PF00892 EamA-like transporter family AM341_RS25010 PF07690 Major Facilitator Superfamily AM341_RS25015 PF02909 Tetracyclin repressor-like, C-terminal domain AM341_RS25015 PF00440 Bacterial regulatory proteins, tetR family AM341_RS25030 PF13610 DDE domain AM341_RS25050 PF02627 Carboxymuconolactone decarboxylase family AM341_RS25055 PF00085 Thioredoxin AM341_RS25060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM341_RS25065 PF01323 DSBA-like thioredoxin domain AM341_RS25075 PF00155 Aminotransferase class I and II AM341_RS25080 PF00892 EamA-like transporter family AM341_RS25100 PF02395 Immunoglobulin A1 protease AM341_RS25100 PF13018 Extended Signal Peptide of Type V secretion system AM341_RS25100 PF03797 Autotransporter beta-domain AM341_RS25110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM341_RS25140 PF00593 TonB dependent receptor AM341_RS25140 PF07715 TonB-dependent Receptor Plug Domain AM341_RS25150 PF13610 DDE domain AM341_RS25165 PF00328 Histidine phosphatase superfamily (branch 2) AM341_RS25180 PF12704 MacB-like periplasmic core domain AM341_RS25180 PF00005 ABC transporter AM341_RS25180 PF02687 FtsX-like permease family AM341_RS25185 PF12704 MacB-like periplasmic core domain AM341_RS25185 PF02687 FtsX-like permease family AM341_RS25185 PF00005 ABC transporter AM341_RS25190 PF00005 ABC transporter AM341_RS25190 PF12704 MacB-like periplasmic core domain AM341_RS25190 PF02687 FtsX-like permease family AM341_RS25200 PF10634 Fe2+ transport protein AM341_RS25205 PF03239 Iron permease FTR1 family AM341_RS25215 PF04205 FMN-binding domain AM341_RS25220 PF00578 AhpC/TSA family AM341_RS25250 PF13610 DDE domain AM341_RS25255 PF01526 Tn3 transposase DDE domain AM341_RS25255 PF13700 Domain of unknown function (DUF4158) AM341_RS25280 PF13610 DDE domain AM341_RS25295 PF02522 Aminoglycoside 3-N-acetyltransferase AM341_RS25300 PF13610 DDE domain AM341_RS25310 PF00905 Penicillin binding protein transpeptidase domain AM341_RS25320 PF13610 DDE domain AM341_RS25325 PF05717 IS66 Orf2 like protein AM341_RS25340 PF02796 Helix-turn-helix domain of resolvase AM341_RS25340 PF00665 Integrase core domain AM341_RS25345 PF01695 IstB-like ATP binding protein AM341_RS25360 PF07715 TonB-dependent Receptor Plug Domain AM341_RS25360 PF00593 TonB dependent receptor AM341_RS25390 PF00589 Phage integrase family AM341_RS25395 PF01051 Initiator Replication protein AM341_RS25435 PF01297 Zinc-uptake complex component A periplasmic AM341_RS25440 PF00005 ABC transporter AM341_RS25445 PF00950 ABC 3 transport family AM341_RS25450 PF00950 ABC 3 transport family AM341_RS25470 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM341_RS25480 PF04183 IucA / IucC family AM341_RS25480 PF06276 Ferric iron reductase FhuF-like transporter AM341_RS25490 PF04183 IucA / IucC family AM341_RS25490 PF06276 Ferric iron reductase FhuF-like transporter AM341_RS25495 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM341_RS25500 PF07715 TonB-dependent Receptor Plug Domain AM341_RS25500 PF00593 TonB dependent receptor AM341_RS25530 PF02463 RecF/RecN/SMC N terminal domain AM341_RS25535 PF01850 PIN domain AM341_RS25540 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM341_RS25550 PF07362 Post-segregation antitoxin CcdA AM341_RS25555 PF01845 CcdB protein AM341_RS25560 PF00589 Phage integrase family AM341_RS25565 PF01051 Initiator Replication protein AM341_RS25570 PF13614 AAA domain AM341_RS25575 PF02195 ParB-like nuclease domain AM341_RS25575 PF18090 Centromere-binding protein HTH domain AM341_RS25585 PF06924 Protein of unknown function (DUF1281) AM341_RS25595 PF01555 DNA methylase AM341_RS25605 PF07128 Protein of unknown function (DUF1380) AM341_RS25620 PF03230 Antirestriction protein AM341_RS25625 PF07128 Protein of unknown function (DUF1380) AM341_RS25680 PF00436 Single-strand binding protein family AM341_RS25685 PF06006 Bacterial protein of unknown function (DUF905) AM341_RS25695 PF06290 Plasmid SOS inhibition protein (PsiB) AM341_RS25700 PF06952 PsiA protein AM341_RS25710 PF01848 Hok/gef family AM341_RS25730 PF06067 Domain of unknown function (DUF932) AM341_RS25735 PF01464 Transglycosylase SLT domain AM341_RS25740 PF05261 TraM protein, DNA-binding AM341_RS25760 PF05509 TraY domain AM341_RS25765 PF05513 TraA AM341_RS25770 PF07178 TraL protein AM341_RS25775 PF05309 TraE protein AM341_RS25780 PF06586 TraK protein AM341_RS25785 PF03743 Bacterial conjugation TrbI-like protein AM341_RS25790 PF07296 TraP protein AM341_RS25795 PF10894 Protein of unknown function (DUF2689) AM341_RS25805 PF09676 Type IV conjugative transfer system lipoprotein (TraV) AM341_RS25810 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM341_RS25815 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer AM341_RS25820 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) AM341_RS25825 PF12477 Sex factor F TraW protein N terminal AM341_RS25830 PF06834 TraU protein AM341_RS25835 PF09673 Type-F conjugative transfer system pilin assembly protein AM341_RS25840 PF06986 Type-1V conjugative transfer system mating pair stabilisation AM341_RS25845 PF11100 Conjugal transfer protein TrbE AM341_RS25850 PF13728 F plasmid transfer operon protein AM341_RS25865 PF01131 DNA topoisomerase AM341_RS25865 PF01751 Toprim domain AM341_RS25870 PF05321 Haemolysin expression modulating protein AM341_RS25875 PF00816 H-NS histone family AM341_RS25885 PF00589 Phage integrase family AM341_RS25925 PF01051 Initiator Replication protein AM341_RS25930 PF05973 Phage derived protein Gp49-like (DUF891) AM341_RS25940 PF00684 DnaJ central domain AM341_RS25940 PF00226 DnaJ domain AM341_RS25940 PF01556 DnaJ C terminal domain AM341_RS26025 PF03135 CagE, TrbE, VirB family, component of type IV transporter system AM341_RS26060 PF03524 Conjugal transfer protein AM341_RS26065 PF03743 Bacterial conjugation TrbI-like protein AM341_RS26070 PF00437 Type II/IV secretion system protein AM341_RS26100 PF00565 Staphylococcal nuclease homologue