locus-tag	class	description
AM341_RS00010	COG4256	Hemin uptake protein
AM341_RS00015	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM341_RS00030	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM341_RS00030	COG0574	Belongs to the PEP-utilizing enzyme family
AM341_RS00035	COG0318	PFAM AMP-dependent synthetase and ligase
AM341_RS00040	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
AM341_RS00045	COG0644	oxidoreductase
AM341_RS00050	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AM341_RS00055	COG2086	electron transfer activity
AM341_RS00065	COG2207	Transcriptional regulator
AM341_RS00065	COG1917	Cupin 2, conserved barrel domain protein
AM341_RS00070	COG1960	acyl-CoA dehydrogenase activity
AM341_RS00075	COG4670	ketone body catabolic process
AM341_RS00090	COG2271	Major facilitator Superfamily
AM341_RS00095	COG0738	Major facilitator superfamily
AM341_RS00110	COG0628	permease
AM341_RS00115	COG0277	FAD linked oxidase domain protein
AM341_RS00115	COG0247	lactate metabolic process
AM341_RS00120	COG2050	protein possibly involved in aromatic compounds catabolism
AM341_RS00130	COG0316	Belongs to the HesB IscA family
AM341_RS00135	COG0719	Fe-S assembly protein
AM341_RS00140	COG0396	ATPase activity
AM341_RS00145	COG0719	Fe-S assembly protein
AM341_RS00160	COG1376	ErfK ybiS ycfS ynhG family protein
AM341_RS00165	COG4238	major outer membrane lipoprotein
AM341_RS00170	COG0469	pyruvate kinase activity
AM341_RS00180	COG0437	4 iron, 4 sulfur cluster binding
AM341_RS00185	COG2414	aldehyde ferredoxin oxidoreductase
AM341_RS00195	COG0437	4 iron, 4 sulfur cluster binding
AM341_RS00200	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
AM341_RS00210	COG4529	Protein conserved in bacteria
AM341_RS00230	COG3468	outer membrane autotransporter barrel domain protein
AM341_RS00240	COG0307	riboflavin synthase, alpha
AM341_RS00245	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AM341_RS00250	COG2814	Major facilitator Superfamily
AM341_RS00255	COG0583	DNA-binding transcription factor activity
AM341_RS00275	COG2814	Major facilitator Superfamily
AM341_RS00280	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AM341_RS00285	COG0791	NLP P60 protein
AM341_RS00290	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AM341_RS00295	COG1201	RNA secondary structure unwinding
AM341_RS00300	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM341_RS00305	COG0346	lactoylglutathione lyase activity
AM341_RS00310	COG1902	pentaerythritol trinitrate reductase activity
AM341_RS00315	COG1309	transcriptional regulator
AM341_RS00320	COG3313	Fe-S protein
AM341_RS00325	COG4989	oxidoreductase activity
AM341_RS00330	COG2032	superoxide dismutase activity
AM341_RS00335	COG1289	transmembrane transporter activity
AM341_RS00340	COG1566	PFAM secretion protein HlyD family protein
AM341_RS00355	COG3133	Outer membrane lipoprotein
AM341_RS00365	COG3895	Periplasmic Protein
AM341_RS00380	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AM341_RS00385	COG0625	glutathione transferase activity
AM341_RS00390	COG3104	oligopeptide transport
AM341_RS00400	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AM341_RS00410	COG4659	FMN binding
AM341_RS00455	COG0673	inositol 2-dehydrogenase activity
AM341_RS00465	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AM341_RS00470	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS00470	COG1263	PTS System
AM341_RS00475	COG1609	Transcriptional regulator
AM341_RS00480	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS00485	COG1309	transcriptional regulator
AM341_RS00490	COG3250	beta-galactosidase activity
AM341_RS00505	COG5339	Protein conserved in bacteria
AM341_RS00510	COG1482	cell wall glycoprotein biosynthetic process
AM341_RS00515	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM341_RS00515	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM341_RS00520	COG0114	fumarate hydratase activity
AM341_RS00530	COG2205	protein histidine kinase activity
AM341_RS00535	COG0745	RESPONSE REGULATOR receiver
AM341_RS00540	COG3136	membrane protein required for alginate biosynthesis
AM341_RS00550	COG0531	amino acid
AM341_RS00565	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AM341_RS00570	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AM341_RS00575	COG0628	permease
AM341_RS00595	COG3591	Belongs to the peptidase S1B family
AM341_RS00615	COG2814	Major facilitator Superfamily
AM341_RS00620	COG0583	DNA-binding transcription factor activity
AM341_RS00625	COG1940	carbohydrate kinase activity
AM341_RS00630	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AM341_RS00640	COG3381	protein complex oligomerization
AM341_RS00645	COG3302	dmso reductase anchor subunit
AM341_RS00650	COG0437	4 iron, 4 sulfur cluster binding
AM341_RS00655	COG0243	molybdopterin cofactor binding
AM341_RS00660	COG0243	molybdopterin cofactor binding
AM341_RS00675	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM341_RS00695	COG4948	Mandelate Racemase Muconate Lactonizing
AM341_RS00700	COG1063	alcohol dehydrogenase
AM341_RS00705	COG0477	Major facilitator Superfamily
AM341_RS00710	COG0246	Mannitol dehydrogenase
AM341_RS00720	COG1802	Transcriptional regulator
AM341_RS00725	COG4221	oxidoreductase activity
AM341_RS00730	COG0339	signal peptide processing
AM341_RS00735	COG1546	Belongs to the CinA family
AM341_RS00740	COG3111	PFAM Bacterial OB fold (BOF) protein
AM341_RS00745	COG3706	GGDEF domain
AM341_RS00755	COG2814	Major facilitator Superfamily
AM341_RS00760	COG0697	spore germination
AM341_RS00770	COG4977	sequence-specific DNA binding
AM341_RS00775	COG1846	Transcriptional regulator
AM341_RS00795	COG0583	DNA-binding transcription factor activity
AM341_RS00800	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS00805	COG2066	Belongs to the glutaminase family
AM341_RS00815	COG2199	diguanylate cyclase activity
AM341_RS00835	COG3781	membrane
AM341_RS00885	COG3210	domain, Protein
AM341_RS00885	COG2911	Protein conserved in bacteria
AM341_RS00895	COG1396	sequence-specific DNA binding
AM341_RS00900	COG3550	peptidyl-serine autophosphorylation
AM341_RS00910	COG3188	usher protein
AM341_RS00915	COG3539	Fimbrial protein
AM341_RS00920	COG3539	Fimbrial protein
AM341_RS00925	COG3539	Fimbrial protein
AM341_RS00930	COG0243	molybdopterin cofactor binding
AM341_RS00940	COG2207	Transcriptional regulator
AM341_RS00945	COG3119	arylsulfatase activity
AM341_RS00950	COG0641	radical SAM
AM341_RS00955	COG4178	(ABC) transporter
AM341_RS00960	COG4771	TonB-dependent receptor
AM341_RS00965	COG0612	Peptidase, M16
AM341_RS00970	COG0076	glutamate decarboxylase activity
AM341_RS00975	COG0531	amino acid
AM341_RS00980	COG1649	PFAM Uncharacterised BCR, COG1649
AM341_RS00985	COG3706	GGDEF domain
AM341_RS00990	COG2200	EAL domain
AM341_RS00990	COG2202	Pas domain
AM341_RS00990	COG2199	diguanylate cyclase activity
AM341_RS00995	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
AM341_RS01000	COG0747	negative chemotaxis
AM341_RS01005	COG0601	transmembrane transport
AM341_RS01010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM341_RS01015	COG0444	Belongs to the ABC transporter superfamily
AM341_RS01020	COG4608	Belongs to the ABC transporter superfamily
AM341_RS01025	COG1764	response to oxidative stress
AM341_RS01050	COG1064	alcohol dehydrogenase
AM341_RS01055	COG3093	addiction module antidote protein HigA
AM341_RS01060	COG2864	formate dehydrogenase
AM341_RS01065	COG0437	4 iron, 4 sulfur cluster binding
AM341_RS01075	COG0697	spore germination
AM341_RS01080	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM341_RS01095	COG2223	nitrite transmembrane transporter activity
AM341_RS01105	COG1140	nitrate reductase beta subunit
AM341_RS01110	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM341_RS01115	COG2181	nitrate reductase activity
AM341_RS01120	COG0384	phenazine biosynthesis protein PhzF
AM341_RS01125	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AM341_RS01130	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM341_RS01140	COG5433	transposase activity
AM341_RS01155	COG3209	COG3209 Rhs family protein
AM341_RS01170	COG0625	glutathione transferase activity
AM341_RS01175	COG1113	amino acid transport
AM341_RS01180	COG3391	amine dehydrogenase activity
AM341_RS01195	COG4772	TonB-dependent receptor
AM341_RS01200	COG1802	Transcriptional regulator
AM341_RS01205	COG2130	NADP-dependent
AM341_RS01215	COG1247	-acetyltransferase
AM341_RS01220	COG3238	Protein conserved in bacteria
AM341_RS01250	COG1177	transmembrane transport
AM341_RS01255	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM341_RS01260	COG3842	ATPase activity
AM341_RS01265	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM341_RS01270	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM341_RS01275	COG1598	PFAM Uncharacterised protein family UPF0150
AM341_RS01280	COG1724	mRNA binding
AM341_RS01290	COG0826	peptidase U32
AM341_RS01295	COG1396	sequence-specific DNA binding
AM341_RS01300	COG3135	benzoate transporter
AM341_RS01305	COG0675	Transposase, IS605 OrfB family
AM341_RS01320	COG0500	methyltransferase
AM341_RS01325	COG1275	C4-dicarboxylate transporter malic acid transport protein
AM341_RS01330	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM341_RS01335	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM341_RS01340	COG2841	Protein conserved in bacteria
AM341_RS01360	COG5383	Protein conserved in bacteria
AM341_RS01365	COG0583	DNA-binding transcription factor activity
AM341_RS01370	COG0840	transmembrane signaling receptor activity
AM341_RS01385	COG3038	cytochrome b561
AM341_RS01390	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AM341_RS01405	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS01410	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM341_RS01415	COG1643	Atp-dependent helicase
AM341_RS01425	COG0671	phosphoesterase, PA-phosphatase related
AM341_RS01425	COG2453	phosphatase
AM341_RS01430	COG2267	carboxylic ester hydrolase activity
AM341_RS01435	COG4589	Belongs to the CDS family
AM341_RS01440	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AM341_RS01450	COG0667	Aldo Keto reductase
AM341_RS01480	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM341_RS01485	COG3327	negative regulation of DNA-templated transcription, initiation
AM341_RS01490	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
AM341_RS01495	COG0183	Belongs to the thiolase family
AM341_RS01500	COG2050	protein possibly involved in aromatic compounds catabolism
AM341_RS01505	COG1250	3-hydroxyacyl-CoA dehydrogenase
AM341_RS01510	COG1024	Enoyl-CoA hydratase
AM341_RS01515	COG1024	Enoyl-CoA hydratase
AM341_RS01520	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM341_RS01525	COG2151	metal-sulfur cluster biosynthetic enzyme
AM341_RS01530	COG3396	Phenylacetate-CoA oxygenase
AM341_RS01535	COG3460	Phenylacetate-CoA oxygenase
AM341_RS01540	COG3396	Phenylacetate-CoA oxygenase
AM341_RS01545	COG2030	dehydratase
AM341_RS01545	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS01550	COG3733	amine oxidase
AM341_RS01555	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS01560	COG2207	Transcriptional regulator
AM341_RS01565	COG3784	Protein of unknown function (DUF1318)
AM341_RS01575	COG2911	Protein conserved in bacteria
AM341_RS01580	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AM341_RS01585	COG3187	Heat shock protein
AM341_RS01590	COG3042	response to heat
AM341_RS01595	COG0674	pyruvate-flavodoxin oxidoreductase activity
AM341_RS01595	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM341_RS01595	COG1013	pyruvate-flavodoxin oxidoreductase activity
AM341_RS01595	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AM341_RS01605	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM341_RS01610	COG0589	response to stress
AM341_RS01620	COG0513	Belongs to the DEAD box helicase family
AM341_RS01635	COG3706	GGDEF domain
AM341_RS01640	COG2840	Smr protein MutS2
AM341_RS01650	COG0583	DNA-binding transcription factor activity
AM341_RS01655	COG1473	amidohydrolase
AM341_RS01660	COG1473	amidohydrolase
AM341_RS01670	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AM341_RS01675	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM341_RS01680	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM341_RS01685	COG0589	response to stress
AM341_RS01690	COG3182	Iron-regulated membrane protein
AM341_RS01695	COG0668	transmembrane transport
AM341_RS01700	COG4166	transmembrane transport
AM341_RS01710	COG0583	DNA-binding transcription factor activity
AM341_RS01715	COG1073	alpha beta
AM341_RS01720	COG0702	epimerase
AM341_RS01725	COG2866	Carboxypeptidase
AM341_RS01730	COG4948	Mandelate Racemase Muconate Lactonizing
AM341_RS01735	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AM341_RS01740	COG3283	Transcriptional regulator of aromatic amino acids metabolism
AM341_RS01750	COG3106	COG3106 Predicted ATPase
AM341_RS01755	COG1609	Transcriptional regulator
AM341_RS01765	COG3842	ATPase activity
AM341_RS01770	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM341_RS01775	COG1554	hydrolase, family 65, central catalytic
AM341_RS01780	COG0673	inositol 2-dehydrogenase activity
AM341_RS01785	COG1082	Xylose isomerase domain protein TIM barrel
AM341_RS01790	COG1063	alcohol dehydrogenase
AM341_RS01795	COG0395	ABC-type sugar transport system, permease component
AM341_RS01800	COG1175	transmembrane transport
AM341_RS01810	COG0366	Alpha amylase catalytic
AM341_RS01815	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM341_RS01825	COG1983	PspC domain protein
AM341_RS01835	COG1842	Phage shock protein A
AM341_RS01840	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM341_RS01845	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM341_RS01850	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AM341_RS01855	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS01865	COG1917	Cupin 2, conserved barrel domain protein
AM341_RS01865	COG1396	sequence-specific DNA binding
AM341_RS01870	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AM341_RS01875	COG0174	glutamine synthetase
AM341_RS01880	COG0531	amino acid
AM341_RS01895	COG4166	transmembrane transport
AM341_RS01900	COG4168	peptide transport system, permease
AM341_RS01905	COG4171	peptide transport system, permease
AM341_RS01910	COG4172	Belongs to the ABC transporter superfamily
AM341_RS01915	COG4172	Belongs to the ABC transporter superfamily
AM341_RS01920	COG2852	Protein conserved in bacteria
AM341_RS01925	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AM341_RS01930	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM341_RS01930	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM341_RS01945	COG5001	Diguanylate cyclase
AM341_RS01955	COG1349	DNA-binding transcription factor activity
AM341_RS01965	COG0023	Translation Initiation Factor
AM341_RS01975	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AM341_RS01980	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
AM341_RS01985	COG0671	phosphoesterase, PA-phosphatase related
AM341_RS01995	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AM341_RS02025	COG0583	DNA-binding transcription factor activity
AM341_RS02035	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM341_RS02050	COG0616	signal peptide processing
AM341_RS02055	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS02060	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
AM341_RS02065	COG1187	pseudouridine synthase activity
AM341_RS02070	COG4907	membrane protein (DUF2207)
AM341_RS02075	COG0009	L-threonylcarbamoyladenylate synthase
AM341_RS02080	COG0613	PHP domain protein
AM341_RS02090	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AM341_RS02095	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM341_RS02095	COG0512	Glutamine amidotransferase of anthranilate synthase
AM341_RS02100	COG0134	indole-3-glycerol-phosphate synthase activity
AM341_RS02100	COG0135	phosphoribosylanthranilate isomerase activity
AM341_RS02115	COG3729	General stress protein
AM341_RS02120	COG3685	Protein conserved in bacteria
AM341_RS02125	COG3685	Protein conserved in bacteria
AM341_RS02130	COG3047	cAMP biosynthetic process
AM341_RS02150	COG1607	acyl-coa hydrolase
AM341_RS02155	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AM341_RS02160	COG2350	Protein conserved in bacteria
AM341_RS02165	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AM341_RS02185	COG4608	Belongs to the ABC transporter superfamily
AM341_RS02190	COG0444	Belongs to the ABC transporter superfamily
AM341_RS02195	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM341_RS02200	COG0601	transmembrane transport
AM341_RS02205	COG4166	transmembrane transport
AM341_RS02215	COG2095	MarC family integral membrane protein
AM341_RS02220	COG1454	alcohol dehydrogenase
AM341_RS02220	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS02230	COG1435	thymidine kinase activity
AM341_RS02240	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AM341_RS02245	COG0745	RESPONSE REGULATOR receiver
AM341_RS02250	COG1752	Esterase of the alpha-beta hydrolase superfamily
AM341_RS02260	COG0788	formyltetrahydrofolate deformylase activity
AM341_RS02295	COG2181	nitrate reductase activity
AM341_RS02300	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM341_RS02305	COG1140	nitrate reductase beta subunit
AM341_RS02310	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM341_RS02315	COG2223	nitrite transmembrane transporter activity
AM341_RS02325	COG3850	Histidine kinase
AM341_RS02330	COG2197	response regulator
AM341_RS02335	COG4932	domain protein
AM341_RS02340	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AM341_RS02345	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AM341_RS02350	COG4572	Cation transport regulator
AM341_RS02355	COG0387	Pfam Sodium calcium exchanger
AM341_RS02385	COG2912	Transglutaminase-like superfamily
AM341_RS02390	COG3094	Invasion gene expression up-regulator, SirB
AM341_RS02395	COG2890	protein-(glutamine-N5) methyltransferase activity
AM341_RS02425	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AM341_RS02435	COG0659	secondary active sulfate transmembrane transporter activity
AM341_RS02450	COG0012	GTP binding
AM341_RS02465	COG3468	outer membrane autotransporter barrel domain protein
AM341_RS02470	COG3284	Transcriptional regulator
AM341_RS02475	COG2376	Dihydroxyacetone kinase
AM341_RS02480	COG1461	Dihydroxyacetone kinase
AM341_RS02485	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
AM341_RS02485	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM341_RS02485	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS02505	COG2261	transglycosylase associated protein
AM341_RS02510	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
AM341_RS02525	COG1619	proteins homologs of microcin C7 resistance protein MccF
AM341_RS02540	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AM341_RS02550	COG2719	SpoVR family
AM341_RS02565	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AM341_RS02570	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AM341_RS02575	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AM341_RS02590	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM341_RS02620	COG2894	cell division
AM341_RS02680	COG2200	EAL domain
AM341_RS02705	COG2200	EAL domain
AM341_RS02710	COG0789	Transcriptional regulator
AM341_RS02715	COG5562	phage envelope protein
AM341_RS02725	COG0538	isocitrate dehydrogenase activity
AM341_RS02730	COG1187	pseudouridine synthase activity
AM341_RS02750	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AM341_RS02755	COG0745	RESPONSE REGULATOR receiver
AM341_RS02760	COG2205	protein histidine kinase activity
AM341_RS02765	COG2850	peptidyl-arginine hydroxylation
AM341_RS02780	COG3842	ATPase activity
AM341_RS02795	COG0500	methyltransferase
AM341_RS02825	COG3344	reverse transcriptase
AM341_RS02965	COG3772	lysozyme
AM341_RS03010	COG0484	heat shock protein binding
AM341_RS03015	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
AM341_RS03020	COG1403	HNH endonuclease
AM341_RS03115	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM341_RS03125	COG0582	viral genome integration into host DNA
AM341_RS03130	COG1177	transmembrane transport
AM341_RS03135	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM341_RS03145	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AM341_RS03150	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AM341_RS03160	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM341_RS03165	COG1136	(ABC) transporter
AM341_RS03170	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM341_RS03175	COG4763	Acyl-transferase
AM341_RS03180	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AM341_RS03185	COG1388	LysM domain
AM341_RS03185	COG1376	ErfK ybiS ycfS ynhG family protein
AM341_RS03195	COG1309	transcriptional regulator
AM341_RS03200	COG3134	Outer membrane lipoprotein
AM341_RS03205	COG1252	NADH dehydrogenase
AM341_RS03230	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
AM341_RS03235	COG5633	Lipoprotein
AM341_RS03240	COG0537	adenosine 5'-monophosphoramidase activity
AM341_RS03245	COG4773	Receptor
AM341_RS03250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS03250	COG1263	PTS System
AM341_RS03255	COG0084	hydrolase, TatD family'
AM341_RS03260	COG0470	DNA polymerase III
AM341_RS03270	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AM341_RS03275	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AM341_RS03280	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM341_RS03290	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS03295	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM341_RS03315	COG1399	metal-binding, possibly nucleic acid-binding protein
AM341_RS03320	COG0424	maF-like protein
AM341_RS03325	COG0564	pseudouridine synthase activity
AM341_RS03340	COG1530	ribonuclease E activity
AM341_RS03345	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AM341_RS03350	COG1256	bacterial-type flagellum assembly
AM341_RS03355	COG1705	Flagellar rod assembly protein muramidase FlgJ
AM341_RS03355	COG3951	Flagellar rod assembly protein muramidase FlgJ
AM341_RS03370	COG4786	Flagellar basal body rod
AM341_RS03375	COG4787	bacterial-type flagellum-dependent cell motility
AM341_RS03380	COG1749	Flagellar hook protein flgE
AM341_RS03385	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AM341_RS03390	COG1558	bacterial-type flagellum-dependent cell motility
AM341_RS03395	COG1815	bacterial-type flagellum-dependent cell motility
AM341_RS03400	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
AM341_RS03405	COG2747	anti-sigma28 factor FlgM
AM341_RS03410	COG3418	PFAM FlgN family protein
AM341_RS03415	COG0728	peptidoglycan biosynthetic process
AM341_RS03420	COG0673	inositol 2-dehydrogenase activity
AM341_RS03430	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM341_RS03440	COG2999	glutathione oxidoreductase activity
AM341_RS03480	COG3038	cytochrome b561
AM341_RS03485	COG2353	YceI-like domain
AM341_RS03495	COG1560	Kdo2-lipid A biosynthetic process
AM341_RS03510	COG5645	(Lipo)protein
AM341_RS03515	COG2943	transferase activity, transferring hexosyl groups
AM341_RS03540	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM341_RS03545	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
AM341_RS03580	COG2197	response regulator
AM341_RS03595	COG1462	curli production assembly transport component CsgG
AM341_RS03605	COG3381	protein complex oligomerization
AM341_RS03645	COG3706	GGDEF domain
AM341_RS03650	COG0457	Tetratricopeptide repeat
AM341_RS03655	COG0726	polysaccharide deacetylase
AM341_RS03655	COG1649	PFAM Uncharacterised BCR, COG1649
AM341_RS03660	COG1215	transferase activity, transferring glycosyl groups
AM341_RS03665	COG3658	cytochrome
AM341_RS03670	COG1702	phosphate starvation-inducible protein PhoH
AM341_RS03680	COG2837	iron assimilation
AM341_RS03685	COG2822	iron ion transport
AM341_RS03705	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AM341_RS03720	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM341_RS03720	COG0506	proline dehydrogenase activity
AM341_RS03720	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM341_RS03725	COG1309	transcriptional regulator
AM341_RS03760	COG2233	PERMEase
AM341_RS03765	COG3729	General stress protein
AM341_RS03805	COG3381	protein complex oligomerization
AM341_RS03810	COG0243	molybdopterin cofactor binding
AM341_RS03815	COG3005	denitrification pathway
AM341_RS03820	COG0745	RESPONSE REGULATOR receiver
AM341_RS03825	COG1879	ABC-type sugar transport system periplasmic component
AM341_RS03830	COG2198	Histidine kinase
AM341_RS03830	COG0784	Response regulator, receiver
AM341_RS03830	COG2205	protein histidine kinase activity
AM341_RS03835	COG0348	domain, Protein
AM341_RS03855	COG1278	Cold shock
AM341_RS03860	COG1278	Cold shock
AM341_RS03880	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM341_RS03885	COG1596	polysaccharide export
AM341_RS03890	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AM341_RS03895	COG3206	protein involved in exopolysaccharide biosynthesis
AM341_RS03895	COG0489	protein tyrosine kinase activity
AM341_RS03910	COG1294	oxidase, subunit
AM341_RS03915	COG1271	oxidase subunit
AM341_RS03920	COG1773	rubredoxin
AM341_RS03925	COG1999	signal sequence binding
AM341_RS03930	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM341_RS03935	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
AM341_RS03940	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AM341_RS03945	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AM341_RS03955	COG0670	Belongs to the BI1 family
AM341_RS03960	COG2920	part of a sulfur-relay system
AM341_RS03965	COG1254	Belongs to the acylphosphatase family
AM341_RS03980	COG1832	CoA-binding protein
AM341_RS03995	COG0210	DNA helicase
AM341_RS04000	COG3304	Inner membrane component domain
AM341_RS04005	COG1289	transmembrane transporter activity
AM341_RS04010	COG3070	regulator of competence-specific genes
AM341_RS04025	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AM341_RS04025	COG2885	chlorophyll binding
AM341_RS04035	COG1067	ATP-dependent peptidase activity
AM341_RS04045	COG3130	regulation of translation
AM341_RS04050	COG3009	Protein conserved in bacteria
AM341_RS04055	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM341_RS04055	COG3008	intermembrane lipid transfer
AM341_RS04060	COG2995	paraquat-inducible protein a
AM341_RS04065	COG0488	(ABC) transporter
AM341_RS04075	COG0633	Ferredoxin
AM341_RS04075	COG3217	Mosc domain protein beta barrel domain protein
AM341_RS04090	COG3121	Chaperone
AM341_RS04095	COG3539	Fimbrial protein
AM341_RS04100	COG3539	Fimbrial protein
AM341_RS04105	COG3539	Fimbrial protein
AM341_RS04110	COG3188	usher protein
AM341_RS04115	COG3121	Chaperone
AM341_RS04120	COG3539	Fimbrial protein
AM341_RS04130	COG0431	NADPH-dependent FMN reductase
AM341_RS04135	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM341_RS04145	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM341_RS04150	COG1116	anion transmembrane transporter activity
AM341_RS04155	COG0308	aminopeptidase N
AM341_RS04180	COG1448	Aminotransferase
AM341_RS04185	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AM341_RS04190	COG3108	Peptidase M15
AM341_RS04200	COG2989	Protein conserved in bacteria
AM341_RS04210	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
AM341_RS04220	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AM341_RS04230	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM341_RS04235	COG3173	Aminoglycoside phosphotransferase
AM341_RS04250	COG3214	Protein conserved in bacteria
AM341_RS04255	COG1663	tetraacyldisaccharide 4'-kinase activity
AM341_RS04260	COG1132	(ABC) transporter
AM341_RS04265	COG2333	competence protein COMEC
AM341_RS04265	COG0658	competence protein
AM341_RS04275	COG0539	negative regulation of cytoplasmic translation
AM341_RS04285	COG0501	Belongs to the peptidase M48B family
AM341_RS04300	COG2323	membrane
AM341_RS04305	COG1944	ATP diphosphatase activity
AM341_RS04310	COG2116	formate transmembrane transporter activity
AM341_RS04315	COG1882	Formate acetyltransferase
AM341_RS04320	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM341_RS04325	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM341_RS04330	COG0583	DNA-binding transcription factor activity
AM341_RS04335	COG0531	amino acid
AM341_RS04345	COG1335	isochorismatase
AM341_RS04350	COG3302	dmso reductase anchor subunit
AM341_RS04355	COG0437	4 iron, 4 sulfur cluster binding
AM341_RS04360	COG0243	molybdopterin cofactor binding
AM341_RS04370	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AM341_RS04380	COG1178	ABC-type Fe3 transport system permease component
AM341_RS04380	COG1674	ftsk spoiiie
AM341_RS04385	COG1522	sequence-specific DNA binding
AM341_RS04395	COG0492	ferredoxin-NADP+ reductase activity
AM341_RS04400	COG4988	ABC transporter
AM341_RS04405	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AM341_RS04425	COG0542	response to heat
AM341_RS04435	COG1278	Cold shock
AM341_RS04440	COG1136	(ABC) transporter
AM341_RS04440	COG0577	efflux transmembrane transporter activity
AM341_RS04445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM341_RS04450	COG2990	Protein conserved in bacteria
AM341_RS04455	COG3593	DNA synthesis involved in DNA repair
AM341_RS04470	COG2431	L-lysine efflux transmembrane transporter activity
AM341_RS04480	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM341_RS04485	COG0028	Belongs to the TPP enzyme family
AM341_RS04490	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
AM341_RS04495	COG0702	epimerase
AM341_RS04500	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM341_RS04505	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM341_RS04520	COG1126	abc transporter atp-binding protein
AM341_RS04525	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM341_RS04530	COG4215	(ABC) transporter
AM341_RS04535	COG4160	amino acid transport
AM341_RS04540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM341_RS04555	COG1177	transmembrane transport
AM341_RS04560	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM341_RS04565	COG3842	ATPase activity
AM341_RS04570	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM341_RS04590	COG0778	Nitroreductase
AM341_RS04600	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM341_RS04615	COG3226	Transcriptional regulator
AM341_RS04620	COG0738	Major facilitator superfamily
AM341_RS04625	COG0561	phosphatase activity
AM341_RS04635	COG2814	Major facilitator Superfamily
AM341_RS04640	COG0671	phosphoesterase, PA-phosphatase related
AM341_RS04645	COG1349	DNA-binding transcription factor activity
AM341_RS04650	COG1686	Belongs to the peptidase S11 family
AM341_RS04655	COG0625	glutathione transferase activity
AM341_RS04660	COG2133	pyrroloquinoline quinone binding
AM341_RS04675	COG2199	diguanylate cyclase activity
AM341_RS04680	COG2200	EAL domain
AM341_RS04685	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM341_RS04695	COG0747	negative chemotaxis
AM341_RS04700	COG4172	Belongs to the ABC transporter superfamily
AM341_RS04705	COG1446	asparaginase
AM341_RS04710	COG0303	'Molybdopterin
AM341_RS04715	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM341_RS04720	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM341_RS04725	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM341_RS04730	COG1882	Formate acetyltransferase
AM341_RS04735	COG0561	phosphatase activity
AM341_RS04745	COG0488	(ABC) transporter
AM341_RS04750	COG1376	ErfK ybiS ycfS ynhG family protein
AM341_RS04755	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM341_RS04760	COG1321	iron dependent repressor
AM341_RS04770	COG2194	sulfuric ester hydrolase activity
AM341_RS04775	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AM341_RS04780	COG5006	permease, DMT superfamily
AM341_RS04805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM341_RS04810	COG0765	amino acid transport
AM341_RS04815	COG1126	abc transporter atp-binding protein
AM341_RS04820	COG0668	transmembrane transport
AM341_RS04835	COG4774	siderophore transport
AM341_RS04845	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM341_RS04855	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AM341_RS04860	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM341_RS04865	COG1199	ATP-dependent helicase activity
AM341_RS04875	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
AM341_RS04880	COG0513	Belongs to the DEAD box helicase family
AM341_RS04885	COG1309	transcriptional regulator
AM341_RS04895	COG1131	(ABC) transporter
AM341_RS04900	COG0842	Transport permease protein
AM341_RS04905	COG0842	Transport permease protein
AM341_RS04915	COG3568	Endonuclease Exonuclease Phosphatase
AM341_RS04920	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM341_RS04925	COG0392	lysyltransferase activity
AM341_RS04930	COG0670	Belongs to the BI1 family
AM341_RS04935	COG0670	Belongs to the BI1 family
AM341_RS04940	COG0314	molybdopterin synthase activity
AM341_RS04945	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AM341_RS04955	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM341_RS04965	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AM341_RS04975	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AM341_RS04980	COG2226	methyltransferase
AM341_RS04995	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AM341_RS05000	COG1881	PFAM PEBP family protein
AM341_RS05010	COG4677	pectinesterase activity
AM341_RS05015	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AM341_RS05020	COG0471	metal ion transport
AM341_RS05025	COG2828	Protein conserved in bacteria
AM341_RS05030	COG0583	DNA-binding transcription factor activity
AM341_RS05040	COG0561	phosphatase activity
AM341_RS05045	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AM341_RS05050	COG4149	molybdate abc transporter
AM341_RS05055	COG0725	ABC transporter, periplasmic molybdate-binding protein
AM341_RS05070	COG3585	molybdate ion transport
AM341_RS05070	COG2005	Transcriptional regulator
AM341_RS05075	COG1119	ATPase activity
AM341_RS05080	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AM341_RS05085	COG1085	galactose-1-phosphate uridylyltransferase
AM341_RS05095	COG2017	converts alpha-aldose to the beta-anomer
AM341_RS05105	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM341_RS05120	COG1230	cation diffusion facilitator family transporter
AM341_RS05125	COG3201	nicotinamide mononucleotide transporter
AM341_RS05175	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AM341_RS05180	COG2885	chlorophyll binding
AM341_RS05190	COG3064	Membrane
AM341_RS05195	COG0848	biopolymer transport protein
AM341_RS05200	COG0811	peptide transport
AM341_RS05205	COG0824	Thioesterase
AM341_RS05210	COG3790	cyd operon protein YbgE
AM341_RS05215	COG4890	Cyd operon protein YbgT
AM341_RS05220	COG1294	oxidase, subunit
AM341_RS05225	COG1271	oxidase subunit
AM341_RS05235	COG0383	alpha-mannosidase activity
AM341_RS05240	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS05240	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS05240	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS05245	COG2188	Transcriptional regulator
AM341_RS05250	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM341_RS05260	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM341_RS05265	COG0567	Dehydrogenase, E1 component
AM341_RS05270	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM341_RS05275	COG1053	succinate dehydrogenase
AM341_RS05280	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AM341_RS05285	COG2009	succinate dehydrogenase
AM341_RS05300	COG0372	Belongs to the citrate synthase family
AM341_RS05305	COG3539	Fimbrial protein
AM341_RS05310	COG3188	usher protein
AM341_RS05315	COG3121	Chaperone
AM341_RS05320	COG3539	Fimbrial protein
AM341_RS05325	COG3180	Ammonia monooxygenase
AM341_RS05340	COG1984	allophanate hydrolase subunit 2
AM341_RS05345	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AM341_RS05350	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AM341_RS05355	COG3104	oligopeptide transport
AM341_RS05360	COG0415	Belongs to the DNA photolyase family
AM341_RS05365	COG3272	Protein of unknown function (DUF1722)
AM341_RS05400	COG3209	COG3209 Rhs family protein
AM341_RS05430	COG2205	protein histidine kinase activity
AM341_RS05435	COG0745	RESPONSE REGULATOR receiver
AM341_RS05450	COG0531	amino acid
AM341_RS05470	COG0033	Phosphoglucomutase
AM341_RS05475	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
AM341_RS05480	COG0596	Alpha beta hydrolase
AM341_RS05490	COG0716	FMN binding
AM341_RS05500	COG0735	belongs to the Fur family
AM341_RS05520	COG1263	PTS System
AM341_RS05520	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS05520	COG2190	(PTS) system
AM341_RS05530	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM341_RS05535	COG1846	Transcriptional regulator
AM341_RS05535	COG1940	carbohydrate kinase activity
AM341_RS05540	COG0647	UMP catabolic process
AM341_RS05550	COG0367	asparagine synthase
AM341_RS05595	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM341_RS05605	COG1702	phosphate starvation-inducible protein PhoH
AM341_RS05615	COG4535	Mg2 and Co2 transporter CorC
AM341_RS05620	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AM341_RS05625	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM341_RS05630	COG0765	amino acid transport
AM341_RS05635	COG0765	amino acid transport
AM341_RS05640	COG1126	abc transporter atp-binding protein
AM341_RS05650	COG0443	Heat shock 70 kDa protein
AM341_RS05655	COG2214	Heat shock protein DnaJ domain protein
AM341_RS05665	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM341_RS05670	COG2214	Heat shock protein DnaJ domain protein
AM341_RS05680	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM341_RS05685	COG2888	peptidyl-tyrosine sulfation
AM341_RS05700	COG1466	dna polymerase III delta subunit
AM341_RS05710	COG0406	alpha-ribazole phosphatase activity
AM341_RS05715	COG0799	negative regulation of ribosome biogenesis
AM341_RS05725	COG0768	penicillin binding
AM341_RS05730	COG0772	Belongs to the SEDS family
AM341_RS05735	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM341_RS05740	COG1686	Belongs to the peptidase S11 family
AM341_RS05760	COG0583	DNA-binding transcription factor activity
AM341_RS05775	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AM341_RS05805	COG3069	C4-dicarboxylate transmembrane transporter activity
AM341_RS05810	COG4565	transcriptional regulatory protein
AM341_RS05815	COG3290	protein histidine kinase activity
AM341_RS05820	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AM341_RS05830	COG2301	Belongs to the HpcH HpaI aldolase family
AM341_RS05835	COG3051	citrate lyase alpha subunit
AM341_RS05850	COG0471	metal ion transport
AM341_RS05855	COG3719	Belongs to the RNase T2 family
AM341_RS05865	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM341_RS05875	COG1063	alcohol dehydrogenase
AM341_RS05895	COG0589	response to stress
AM341_RS05900	COG3634	alkyl hydroperoxide reductase activity
AM341_RS05905	COG0450	alkyl hydroperoxide reductase
AM341_RS05910	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM341_RS05920	COG0583	DNA-binding transcription factor activity
AM341_RS05925	COG3969	phosphoadenosine phosphosulfate
AM341_RS05930	COG1475	DNA binding
AM341_RS05935	COG0436	Aminotransferase
AM341_RS05940	COG0371	Dehydrogenase
AM341_RS05945	COG2879	small protein
AM341_RS05950	COG1966	Carbon starvation protein
AM341_RS05955	COG2050	protein possibly involved in aromatic compounds catabolism
AM341_RS05960	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS05965	COG1535	isochorismatase
AM341_RS05965	COG3433	isochorismatase activity
AM341_RS05970	COG1021	2,3-dihydroxybenzoate-AMP ligase
AM341_RS05975	COG1169	isochorismate synthase
AM341_RS05985	COG4592	Periplasmic binding protein
AM341_RS05995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM341_RS06000	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM341_RS06005	COG1120	ATPase activity
AM341_RS06010	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
AM341_RS06015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AM341_RS06015	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AM341_RS06020	COG3251	PFAM MbtH domain protein
AM341_RS06025	COG2382	esterase
AM341_RS06030	COG4771	TonB-dependent receptor
AM341_RS06035	COG2977	Belongs to the P-Pant transferase superfamily
AM341_RS06045	COG3385	transposase activity
AM341_RS06090	COG3423	Transcriptional regulator
AM341_RS06115	COG0500	methyltransferase
AM341_RS06120	COG0438	transferase activity, transferring glycosyl groups
AM341_RS06125	COG0438	transferase activity, transferring glycosyl groups
AM341_RS06175	COG0778	Nitroreductase
AM341_RS06180	COG0668	transmembrane transport
AM341_RS06185	COG1113	amino acid transport
AM341_RS06190	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM341_RS06195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM341_RS06200	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM341_RS06205	COG1538	Outer membrane efflux protein
AM341_RS06215	COG0745	RESPONSE REGULATOR receiver
AM341_RS06220	COG5002	protein histidine kinase activity
AM341_RS06225	COG1215	transferase activity, transferring glycosyl groups
AM341_RS06230	COG4783	chaperone-mediated protein folding
AM341_RS06245	COG2207	Transcriptional regulator
AM341_RS06260	COG2197	response regulator
AM341_RS06265	COG3539	Fimbrial protein
AM341_RS06270	COG3539	Fimbrial protein
AM341_RS06275	COG3188	usher protein
AM341_RS06280	COG3121	Chaperone
AM341_RS06285	COG3539	Fimbrial protein
AM341_RS06295	COG2501	S4 domain
AM341_RS06300	COG1988	membrane-bound metal-dependent
AM341_RS06310	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AM341_RS06325	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AM341_RS06330	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AM341_RS06335	COG0549	Belongs to the carbamate kinase family
AM341_RS06345	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM341_RS06350	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM341_RS06355	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AM341_RS06360	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AM341_RS06365	COG3257	ureidoglycine aminohydrolase activity
AM341_RS06370	COG1929	Belongs to the glycerate kinase type-1 family
AM341_RS06375	COG2233	PERMEase
AM341_RS06385	COG1953	Uracil, thiamine, allantoin
AM341_RS06390	COG2084	Dehydrogenase
AM341_RS06395	COG3622	Belongs to the hyi family
AM341_RS06400	COG3960	tartronate-semialdehyde synthase activity
AM341_RS06405	COG1414	Transcriptional regulator
AM341_RS06415	COG0583	DNA-binding transcription factor activity
AM341_RS06450	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AM341_RS06455	COG4181	ATPase activity
AM341_RS06460	COG2755	lipolytic protein G-D-S-L family
AM341_RS06465	COG0300	oxidoreductase activity
AM341_RS06470	COG3118	belongs to the thioredoxin family
AM341_RS06475	COG0390	transport system, permease component
AM341_RS06480	COG4619	ABC transporter
AM341_RS06485	COG0330	HflC and HflK could
AM341_RS06490	COG1585	Membrane protein implicated in regulation of membrane protease activity
AM341_RS06495	COG0789	Transcriptional regulator
AM341_RS06500	COG0531	amino acid
AM341_RS06505	COG2066	Belongs to the glutaminase family
AM341_RS06510	COG2217	Heavy metal translocating P-type atpase
AM341_RS06515	COG3093	addiction module antidote protein HigA
AM341_RS06525	COG3735	TraB family
AM341_RS06535	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM341_RS06540	COG0737	Belongs to the 5'-nucleotidase family
AM341_RS06550	COG2223	nitrite transmembrane transporter activity
AM341_RS06555	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AM341_RS06555	COG4651	solute:proton antiporter activity
AM341_RS06560	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM341_RS06600	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AM341_RS06615	COG2832	Protein of unknown function (DUF454)
AM341_RS06620	COG3923	Primosomal replication protein n
AM341_RS06630	COG1196	nuclear chromosome segregation
AM341_RS06630	COG3264	Mechanosensitive ion channel
AM341_RS06640	COG1309	transcriptional regulator
AM341_RS06645	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM341_RS06650	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM341_RS06665	COG0110	maltose O-acetyltransferase activity
AM341_RS06675	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM341_RS06680	COG5507	3-demethylubiquinone-9 3-methyltransferase
AM341_RS06690	COG3695	enzyme binding
AM341_RS06695	COG3126	Type III secretion system lipoprotein chaperone (YscW)
AM341_RS06700	COG1946	Acyl-CoA thioesterase
AM341_RS06705	COG0004	ammonium transporteR
AM341_RS06710	COG0347	Belongs to the P(II) protein family
AM341_RS06715	COG1132	(ABC) transporter
AM341_RS06720	COG1132	(ABC) transporter
AM341_RS06725	COG1522	sequence-specific DNA binding
AM341_RS06735	COG4533	DNA binding
AM341_RS06745	COG0824	Thioesterase
AM341_RS06750	COG1555	photosystem II stabilization
AM341_RS06755	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM341_RS06760	COG0776	regulation of translation
AM341_RS06765	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AM341_RS06790	COG0271	Belongs to the BolA IbaG family
AM341_RS06800	COG3056	Lipoprotein
AM341_RS06805	COG2223	nitrite transmembrane transporter activity
AM341_RS06810	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AM341_RS06815	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AM341_RS06820	COG1845	cytochrome c oxidase, subunit III
AM341_RS06825	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AM341_RS06835	COG2814	Major facilitator Superfamily
AM341_RS06845	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AM341_RS06850	COG0693	protein deglycase activity
AM341_RS06865	COG0142	geranyltranstransferase activity
AM341_RS06875	COG0667	Aldo Keto reductase
AM341_RS06880	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AM341_RS06885	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AM341_RS06900	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM341_RS06900	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM341_RS06910	COG4238	major outer membrane lipoprotein
AM341_RS06920	COG3248	Nucleoside-binding outer membrane protein
AM341_RS06925	COG1403	HNH endonuclease
AM341_RS06930	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM341_RS06935	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM341_RS06940	COG1862	Preprotein translocase
AM341_RS06960	COG0366	Alpha amylase catalytic
AM341_RS06965	COG1113	amino acid transport
AM341_RS06970	COG1114	Component of the transport system for branched-chain amino acids
AM341_RS06975	COG5002	protein histidine kinase activity
AM341_RS06980	COG0745	RESPONSE REGULATOR receiver
AM341_RS06985	COG0420	3'-5' exonuclease activity
AM341_RS06990	COG0419	ATPase involved in DNA repair
AM341_RS06995	COG2814	Major facilitator Superfamily
AM341_RS07000	COG1940	carbohydrate kinase activity
AM341_RS07025	COG4126	flavin adenine dinucleotide binding
AM341_RS07050	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AM341_RS07055	COG3706	GGDEF domain
AM341_RS07065	COG1785	Belongs to the alkaline phosphatase family
AM341_RS07080	COG1181	Belongs to the D-alanine--D-alanine ligase family
AM341_RS07100	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AM341_RS07110	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM341_RS07115	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM341_RS07120	COG3468	outer membrane autotransporter barrel domain protein
AM341_RS07130	COG0113	porphobilinogen synthase activity
AM341_RS07135	COG2175	clavaminate synthase activity
AM341_RS07140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM341_RS07150	COG4521	taurine ABC transporter
AM341_RS07170	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AM341_RS07175	COG1215	transferase activity, transferring glycosyl groups
AM341_RS07205	COG3122	Protein conserved in bacteria
AM341_RS07210	COG2814	Major facilitator Superfamily
AM341_RS07225	COG3971	2-oxopent-4-enoate hydratase activity
AM341_RS07245	COG1414	Transcriptional regulator
AM341_RS07250	COG1609	Transcriptional regulator
AM341_RS07260	COG3250	beta-galactosidase activity
AM341_RS07265	COG2223	nitrite transmembrane transporter activity
AM341_RS07270	COG0110	maltose O-acetyltransferase activity
AM341_RS07275	COG2807	transmembrane transport
AM341_RS07285	COG0288	reversible hydration of carbon dioxide
AM341_RS07290	COG0583	DNA-binding transcription factor activity
AM341_RS07295	COG0402	S-adenosylhomocysteine deaminase activity
AM341_RS07300	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AM341_RS07305	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AM341_RS07310	COG2079	MmgE PrpD family protein
AM341_RS07315	COG0372	Belongs to the citrate synthase family
AM341_RS07320	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AM341_RS07325	COG3829	transcription factor binding
AM341_RS07335	COG1280	lysine exporter protein (LysE YggA)
AM341_RS07350	COG1064	alcohol dehydrogenase
AM341_RS07355	COG0402	S-adenosylhomocysteine deaminase activity
AM341_RS07360	COG0549	Belongs to the carbamate kinase family
AM341_RS07370	COG1304	FMN binding
AM341_RS07375	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM341_RS07385	COG0666	response to abiotic stimulus
AM341_RS07400	COG0583	DNA-binding transcription factor activity
AM341_RS07405	COG2771	luxR family
AM341_RS07405	COG2200	EAL domain
AM341_RS07420	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM341_RS07460	COG1556	Lactate utilization protein
AM341_RS07465	COG1139	Iron-sulfur cluster binding protein
AM341_RS07470	COG0247	lactate metabolic process
AM341_RS07475	COG2207	Transcriptional regulator
AM341_RS07480	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM341_RS07490	COG3059	membrane
AM341_RS07495	COG2207	Transcriptional regulator
AM341_RS07495	COG3708	Transcriptional regulator
AM341_RS07510	COG1388	LysM domain
AM341_RS07565	COG3188	usher protein
AM341_RS07575	COG3121	Chaperone
AM341_RS07580	COG0727	PFAM Uncharacterised protein family (UPF0153)
AM341_RS07590	COG3477	response to acidic pH
AM341_RS07600	COG2080	2 iron, 2 sulfur cluster binding
AM341_RS07605	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AM341_RS07610	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AM341_RS07615	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AM341_RS07620	COG0583	DNA-binding transcription factor activity
AM341_RS07645	COG2003	Belongs to the UPF0758 family
AM341_RS07675	COG2020	methyltransferase activity
AM341_RS07785	COG3436	PFAM IS66 Orf2 family protein
AM341_RS07790	COG4372	Transposase
AM341_RS07815	COG3344	reverse transcriptase
AM341_RS07890	COG3811	Belongs to the UPF0386 family
AM341_RS07935	COG0582	viral genome integration into host DNA
AM341_RS07955	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM341_RS07975	COG2195	Cleaves the N-terminal amino acid of tripeptides
AM341_RS07980	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AM341_RS07985	COG1690	Belongs to the RtcB family
AM341_RS07995	COG0454	-acetyltransferase
AM341_RS08005	COG2161	toxin-antitoxin pair type II binding
AM341_RS08025	COG1943	Transposase
AM341_RS08030	COG0791	NLP P60 protein
AM341_RS08035	COG3077	Addiction module antitoxin, RelB DinJ family
AM341_RS08040	COG3041	Addiction module toxin RelE StbE family
AM341_RS08045	COG3034	peptidoglycan biosynthetic process
AM341_RS08050	COG0121	glutamine amidotransferase
AM341_RS08060	COG1960	acyl-CoA dehydrogenase activity
AM341_RS08070	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM341_RS08075	COG5433	transposase activity
AM341_RS08085	COG3209	COG3209 Rhs family protein
AM341_RS08180	COG3157	Type VI secretion system effector, Hcp
AM341_RS08185	COG4104	PAAR repeat-containing protein
AM341_RS08210	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM341_RS08220	COG2226	methyltransferase
AM341_RS08230	COG0741	lytic transglycosylase activity
AM341_RS08230	COG1388	LysM domain
AM341_RS08235	COG2226	methyltransferase
AM341_RS08245	COG0583	DNA-binding transcription factor activity
AM341_RS08250	COG0656	L-ascorbic acid biosynthetic process
AM341_RS08285	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AM341_RS08290	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AM341_RS08295	COG2011	ABC-type metal ion transport system permease component
AM341_RS08300	COG1464	Belongs to the NlpA lipoprotein family
AM341_RS08310	COG1720	tRNA m6t6A37 methyltransferase activity
AM341_RS08320	COG0791	NLP P60 protein
AM341_RS08325	COG3015	lipoprotein NlpE involved in copper resistance
AM341_RS08330	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AM341_RS08335	COG4681	YaeQ
AM341_RS08345	COG4568	rho-dependent transcription termination
AM341_RS08350	COG0037	tRNA processing
AM341_RS08355	COG0346	lactoylglutathione lyase activity
AM341_RS08360	COG1982	Orn Lys Arg decarboxylase major
AM341_RS08370	COG0587	DNA-directed DNA polymerase activity
AM341_RS08395	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AM341_RS08400	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
AM341_RS08410	COG0750	zinc metalloprotease
AM341_RS08415	COG0575	Belongs to the CDS family
AM341_RS08420	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AM341_RS08425	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AM341_RS08460	COG0024	Methionine aminopeptidase
AM341_RS08475	COG1408	metallophosphoesterase
AM341_RS08485	COG3835	regulator
AM341_RS08490	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM341_RS08510	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM341_RS08515	COG2860	membrane
AM341_RS08535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM341_RS08540	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM341_RS08545	COG1120	ATPase activity
AM341_RS08550	COG4774	siderophore transport
AM341_RS08555	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AM341_RS08565	COG1643	Atp-dependent helicase
AM341_RS08570	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AM341_RS08580	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM341_RS08590	COG0617	tRNA 3'-terminal CCA addition
AM341_RS08595	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AM341_RS08600	COG3539	Fimbrial protein
AM341_RS08605	COG3121	Chaperone
AM341_RS08610	COG3188	usher protein
AM341_RS08615	COG3539	Fimbrial protein
AM341_RS08620	COG3539	Fimbrial protein
AM341_RS08625	COG3539	Fimbrial protein
AM341_RS08630	COG3539	Fimbrial protein
AM341_RS08645	COG5464	transposase or invertase
AM341_RS08665	COG0726	polysaccharide deacetylase
AM341_RS08670	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS08675	COG0842	Transport permease protein
AM341_RS08680	COG1131	(ABC) transporter
AM341_RS08685	COG0288	reversible hydration of carbon dioxide
AM341_RS08690	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AM341_RS08695	COG4993	Dehydrogenase
AM341_RS08700	COG2132	Multicopper oxidase
AM341_RS08725	COG1049	propionate catabolic process, 2-methylcitrate cycle
AM341_RS08735	COG3064	Membrane
AM341_RS08740	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM341_RS08745	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM341_RS08750	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AM341_RS08760	COG2186	Transcriptional regulator
AM341_RS08765	COG1113	amino acid transport
AM341_RS08770	COG3725	Membrane protein required for beta-lactamase induction
AM341_RS08775	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM341_RS08780	COG0157	Belongs to the NadC ModD family
AM341_RS08790	COG4969	Belongs to the N-Me-Phe pilin family
AM341_RS08795	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AM341_RS08800	COG1459	type II secretion system
AM341_RS08810	COG0237	dephospho-CoA kinase activity
AM341_RS08825	COG0494	nUDIX hydrolase
AM341_RS08845	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AM341_RS08850	COG0849	cell division
AM341_RS08855	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AM341_RS08860	COG1181	Belongs to the D-alanine--D-alanine ligase family
AM341_RS08875	COG0772	Belongs to the SEDS family
AM341_RS08880	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AM341_RS08890	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AM341_RS08895	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AM341_RS08900	COG0768	penicillin binding
AM341_RS08905	COG3116	cell division
AM341_RS08915	COG2001	Belongs to the MraZ family
AM341_RS08925	COG1609	Transcriptional regulator
AM341_RS08935	COG0440	acetolactate synthase activity
AM341_RS08940	COG0028	Belongs to the TPP enzyme family
AM341_RS08945	COG0583	DNA-binding transcription factor activity
AM341_RS08960	COG0473	3-isopropylmalate dehydrogenase activity
AM341_RS08975	COG2814	Major facilitator Superfamily
AM341_RS08985	COG4533	DNA binding
AM341_RS08990	COG4143	(ABC) transporter
AM341_RS08995	COG1178	ABC-type Fe3 transport system permease component
AM341_RS09000	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
AM341_RS09005	COG0586	Pfam SNARE associated Golgi protein
AM341_RS09010	COG4977	sequence-specific DNA binding
AM341_RS09020	COG1069	ribulokinase activity
AM341_RS09025	COG2160	L-arabinose isomerase activity
AM341_RS09030	COG0235	Class ii aldolase
AM341_RS09035	COG0417	DNA replication proofreading
AM341_RS09045	COG0564	pseudouridine synthase activity
AM341_RS09055	COG1357	PFAM Pentapeptide repeats (8 copies)
AM341_RS09060	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AM341_RS09065	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AM341_RS09070	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM341_RS09095	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AM341_RS09110	COG2271	Major facilitator Superfamily
AM341_RS09115	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
AM341_RS09120	COG0644	oxidoreductase
AM341_RS09175	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AM341_RS09180	COG0505	Belongs to the CarA family
AM341_RS09205	COG1047	Peptidyl-prolyl cis-trans
AM341_RS09220	COG0196	riboflavin kinase activity
AM341_RS09250	COG0583	DNA-binding transcription factor activity
AM341_RS09270	COG3385	transposase activity
AM341_RS09295	COG4735	regulation of single-species biofilm formation
AM341_RS09300	COG1584	GPR1 FUN34 yaaH family protein
AM341_RS09305	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM341_RS09310	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM341_RS09315	COG1115	amino acid carrier protein
AM341_RS09330	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AM341_RS09340	COG0460	homoserine dehydrogenase
AM341_RS09340	COG0527	aspartate kinase activity
AM341_RS09350	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AM341_RS09360	COG0745	RESPONSE REGULATOR receiver
AM341_RS09365	COG4452	Inner membrane protein CreD
AM341_RS09370	COG2205	protein histidine kinase activity
AM341_RS09375	COG0745	RESPONSE REGULATOR receiver
AM341_RS09380	COG3045	CreA protein
AM341_RS09385	COG2207	Transcriptional regulator
AM341_RS09385	COG3708	Transcriptional regulator
AM341_RS09405	COG0741	lytic transglycosylase activity
AM341_RS09415	COG0488	(ABC) transporter
AM341_RS09420	COG1056	cytidyltransferase-related domain
AM341_RS09420	COG3172	ATPase kinase involved in NAD metabolism
AM341_RS09425	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AM341_RS09430	COG0560	Phosphoserine phosphatase
AM341_RS09435	COG3726	membrane protein affecting hemolysin expression
AM341_RS09465	COG1328	CTP reductase activity
AM341_RS09470	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM341_RS09475	COG0084	hydrolase, TatD family'
AM341_RS09480	COG4667	esterase of the alpha-beta hydrolase superfamily
AM341_RS09490	COG2823	Periplasmic or secreted lipoprotein
AM341_RS09500	COG1011	Hydrolase
AM341_RS09505	COG0456	acetyltransferase
AM341_RS09510	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
AM341_RS09540	COG4114	ferric iron reductase
AM341_RS09545	COG2197	response regulator
AM341_RS09550	COG2197	response regulator
AM341_RS09555	COG2966	Psort location CytoplasmicMembrane, score
AM341_RS09570	COG1484	DNA-dependent DNA replication
AM341_RS09585	COG1063	alcohol dehydrogenase
AM341_RS09590	COG1802	Transcriptional regulator
AM341_RS09595	COG2271	Major facilitator Superfamily
AM341_RS09600	COG0840	transmembrane signaling receptor activity
AM341_RS09610	COG1966	Carbon starvation protein
AM341_RS09615	COG2879	small protein
AM341_RS09620	COG0523	cobalamin synthesis protein
AM341_RS09640	COG2814	Major facilitator Superfamily
AM341_RS09645	COG2733	membrane
AM341_RS09650	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AM341_RS09655	COG1924	4 iron, 4 sulfur cluster binding
AM341_RS09670	COG0477	Major facilitator Superfamily
AM341_RS09680	COG3366	ferrous iron transmembrane transporter activity
AM341_RS09685	COG0700	Nucleoside recognition
AM341_RS09690	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM341_RS09695	COG0583	DNA-binding transcription factor activity
AM341_RS09715	COG2186	Transcriptional regulator
AM341_RS09725	COG0246	Mannitol dehydrogenase
AM341_RS09740	COG2610	gluconate transmembrane transporter activity
AM341_RS09765	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AM341_RS09795	COG3436	PFAM IS66 Orf2 family protein
AM341_RS09800	COG4372	Transposase
AM341_RS09850	COG1595	DNA-templated transcription, initiation
AM341_RS09855	COG3712	iron ion homeostasis
AM341_RS09860	COG4772	TonB-dependent receptor
AM341_RS09865	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
AM341_RS09870	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM341_RS09875	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM341_RS09880	COG1120	ATPase activity
AM341_RS09885	COG2085	NADP oxidoreductase coenzyme F420-dependent
AM341_RS09895	COG3344	reverse transcriptase
AM341_RS09910	COG0726	polysaccharide deacetylase
AM341_RS09915	COG0297	glycogen (starch) synthase activity
AM341_RS09920	COG2990	Protein conserved in bacteria
AM341_RS09935	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM341_RS09955	COG1309	transcriptional regulator
AM341_RS09975	COG3344	reverse transcriptase
AM341_RS10055	COG0582	viral genome integration into host DNA
AM341_RS10065	COG1064	alcohol dehydrogenase
AM341_RS10070	COG0433	COG0433 Predicted ATPase
AM341_RS10075	COG0795	lipopolysaccharide-transporting ATPase activity
AM341_RS10080	COG0795	lipopolysaccharide-transporting ATPase activity
AM341_RS10090	COG2927	DNA polymerase III (CHI subunit)
AM341_RS10105	COG0456	acetyltransferase
AM341_RS10110	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
AM341_RS10125	COG2731	YhcH YjgK YiaL family protein
AM341_RS10130	COG1309	transcriptional regulator
AM341_RS10135	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS10140	COG0251	oxidation-reduction process
AM341_RS10165	COG0251	oxidation-reduction process
AM341_RS10170	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AM341_RS10180	COG1609	Transcriptional regulator
AM341_RS10185	COG1263	PTS System
AM341_RS10185	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS10190	COG0366	Alpha amylase catalytic
AM341_RS10195	COG1328	CTP reductase activity
AM341_RS10200	COG0602	queuosine metabolic process
AM341_RS10205	COG3783	Cytochrome b(562)
AM341_RS10210	COG0312	modulator of DNA gyrase
AM341_RS10220	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AM341_RS10230	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM341_RS10235	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM341_RS10240	COG1129	ABC transporter
AM341_RS10245	COG1879	ABC-type sugar transport system periplasmic component
AM341_RS10250	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AM341_RS10255	COG2337	Toxic component of a toxin-antitoxin (TA) module
AM341_RS10260	COG2336	PFAM SpoVT AbrB
AM341_RS10265	COG2105	PFAM AIG2 family protein
AM341_RS10270	COG2911	Protein conserved in bacteria
AM341_RS10275	COG0729	surface antigen
AM341_RS10290	COG1253	flavin adenine dinucleotide binding
AM341_RS10300	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AM341_RS10315	COG1218	3'(2'),5'-bisphosphate nucleotidase
AM341_RS10320	COG0737	Belongs to the 5'-nucleotidase family
AM341_RS10325	COG1733	regulation of RNA biosynthetic process
AM341_RS10330	COG0702	epimerase
AM341_RS10335	COG0697	spore germination
AM341_RS10345	COG1113	amino acid transport
AM341_RS10350	COG0545	Peptidyl-prolyl cis-trans isomerase
AM341_RS10360	COG3061	Opacity-associated protein A
AM341_RS10370	COG0675	Transposase, IS605 OrfB family
AM341_RS10395	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AM341_RS10415	COG3477	response to acidic pH
AM341_RS10420	COG0235	Class ii aldolase
AM341_RS10435	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS10440	COG3414	Phosphotransferase system galactitol-specific IIB component
AM341_RS10460	COG1073	alpha beta
AM341_RS10465	COG3650	response to hydrogen peroxide
AM341_RS10480	COG1960	acyl-CoA dehydrogenase activity
AM341_RS10485	COG0754	glutathionylspermidine amidase activity
AM341_RS10490	COG5463	Belongs to the UPF0441 family
AM341_RS10495	COG3766	membrane
AM341_RS10515	COG2721	sulfolactate sulfo-lyase activity
AM341_RS10520	COG2271	Major facilitator Superfamily
AM341_RS10525	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AM341_RS10530	COG1414	Transcriptional regulator
AM341_RS10535	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM341_RS10545	COG0557	exoribonuclease II activity
AM341_RS10560	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AM341_RS10565	COG0330	HflC and HflK could
AM341_RS10570	COG0330	HflC and HflK could
AM341_RS10575	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AM341_RS10595	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM341_RS10600	COG0802	atpase or kinase
AM341_RS10605	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AM341_RS10605	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AM341_RS10610	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AM341_RS10650	COG1511	domain protein
AM341_RS10650	COG3264	Mechanosensitive ion channel
AM341_RS10665	COG0531	amino acid
AM341_RS10675	COG1053	succinate dehydrogenase
AM341_RS10680	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM341_RS10695	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM341_RS10700	COG3040	lipid binding
AM341_RS10705	COG2076	Multidrug Resistance protein
AM341_RS10710	COG5510	response to toxic substance
AM341_RS10715	COG5510	response to toxic substance
AM341_RS10725	COG1509	lysine 2,3-aminomutase activity
AM341_RS10750	COG0531	amino acid
AM341_RS10755	COG3030	protein affecting phage T7 exclusion by the F plasmid
AM341_RS10760	COG1027	Aspartate ammonia-lyase
AM341_RS10765	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM341_RS10775	COG4232	protein-disulfide reductase activity
AM341_RS10780	COG1309	transcriptional regulator
AM341_RS10795	COG3710	Transcriptional regulator
AM341_RS10800	COG0531	amino acid
AM341_RS10805	COG1982	Orn Lys Arg decarboxylase major
AM341_RS10810	COG3104	oligopeptide transport
AM341_RS10815	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AM341_RS10835	COG2388	GCN5-related N-acetyl-transferase
AM341_RS10840	COG3592	Divergent 4Fe-4S mono-cluster
AM341_RS10845	COG3290	protein histidine kinase activity
AM341_RS10850	COG4565	transcriptional regulatory protein
AM341_RS10860	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM341_RS10865	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM341_RS10865	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM341_RS10870	COG3647	Membrane
AM341_RS10875	COG2211	Major facilitator Superfamily
AM341_RS10880	COG1486	melibiose metabolic process
AM341_RS10885	COG2169	Transcriptional regulator
AM341_RS10890	COG1982	Orn Lys Arg decarboxylase major
AM341_RS10895	COG2207	Transcriptional regulator
AM341_RS10900	COG0531	amino acid
AM341_RS10905	COG2194	sulfuric ester hydrolase activity
AM341_RS10910	COG0745	RESPONSE REGULATOR receiver
AM341_RS10915	COG0642	Histidine kinase
AM341_RS10925	COG0477	Major facilitator Superfamily
AM341_RS10945	COG2824	Alkylphosphonate utilization operon protein PhnA
AM341_RS10950	COG2764	glyoxalase bleomycin resistance protein dioxygenase
AM341_RS10955	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AM341_RS10960	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
AM341_RS10970	COG2188	Transcriptional regulator
AM341_RS10975	COG3624	Phosphonate C-P lyase system protein PhnG
AM341_RS10980	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AM341_RS10985	COG3626	phosphonate metabolism
AM341_RS10990	COG3627	carbon phosphorus lyase activity
AM341_RS10995	COG4107	phosphonate C-P lyase system protein PhnK
AM341_RS11000	COG4778	phosphonate C-P lyase system protein PhnL
AM341_RS11005	COG3454	Phosphonate metabolism
AM341_RS11010	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AM341_RS11015	COG0456	acetyltransferase
AM341_RS11020	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AM341_RS11030	COG0698	ribose 5-phosphate isomerase
AM341_RS11040	COG1737	Transcriptional regulator
AM341_RS11045	COG1879	ABC-type sugar transport system periplasmic component
AM341_RS11050	COG1129	ABC transporter
AM341_RS11055	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM341_RS11060	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM341_RS11065	COG1940	carbohydrate kinase activity
AM341_RS11070	COG2015	COG2015, Alkyl sulfatase and related hydrolases
AM341_RS11080	COG1566	PFAM secretion protein HlyD family protein
AM341_RS11085	COG1289	transmembrane transporter activity
AM341_RS11090	COG1538	Outer membrane efflux protein
AM341_RS11100	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM341_RS11105	COG1301	dicarboxylic acid transport
AM341_RS11115	COG4235	cytochrome complex assembly
AM341_RS11120	COG3088	subunit of a heme lyase
AM341_RS11125	COG1138	Cytochrome C-type biogenesis protein
AM341_RS11130	COG3301	Polysulphide reductase, NrfD
AM341_RS11135	COG0437	4 iron, 4 sulfur cluster binding
AM341_RS11140	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AM341_RS11155	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AM341_RS11160	COG3162	membrane
AM341_RS11170	COG1357	PFAM Pentapeptide repeats (8 copies)
AM341_RS11175	COG0025	NhaP-type Na H and K H
AM341_RS11180	COG2252	PERMEase
AM341_RS11200	COG0789	Transcriptional regulator
AM341_RS11205	COG2207	Transcriptional regulator
AM341_RS11210	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM341_RS11260	COG0629	single-stranded DNA binding
AM341_RS11265	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AM341_RS11270	COG2315	Protein conserved in bacteria
AM341_RS11275	COG0432	Pfam Uncharacterised protein family UPF0047
AM341_RS11280	COG3700	Belongs to the class B bacterial acid phosphatase family
AM341_RS11290	COG1448	Aminotransferase
AM341_RS11295	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AM341_RS11300	COG0305	Participates in initiation and elongation during chromosome replication
AM341_RS11305	COG0604	alcohol dehydrogenase
AM341_RS11315	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM341_RS11335	COG5301	cellulose 1,4-beta-cellobiosidase activity
AM341_RS11410	COG0740	serine-type endopeptidase activity
AM341_RS11455	COG3772	lysozyme
AM341_RS11495	COG1403	HNH endonuclease
AM341_RS11505	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
AM341_RS11520	COG1846	Transcriptional regulator
AM341_RS11560	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AM341_RS11600	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM341_RS11615	COG0735	belongs to the Fur family
AM341_RS11620	COG3237	CsbD-like
AM341_RS11625	COG0534	Mate efflux family protein
AM341_RS11635	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AM341_RS11660	COG1357	PFAM Pentapeptide repeats (8 copies)
AM341_RS11680	COG3842	ATPase activity
AM341_RS11690	COG2182	Extracellular solute-binding protein
AM341_RS11695	COG1175	transmembrane transport
AM341_RS11700	COG3833	ABC-type maltose transport systems, permease component
AM341_RS11705	COG0477	Major facilitator Superfamily
AM341_RS11705	COG2814	Major facilitator Superfamily
AM341_RS11720	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM341_RS11750	COG0527	aspartate kinase activity
AM341_RS11760	COG1187	pseudouridine synthase activity
AM341_RS11770	COG1283	sodium-dependent phosphate transmembrane transporter activity
AM341_RS11775	COG1410	methionine synthase
AM341_RS11775	COG0646	methionine synthase
AM341_RS11780	COG1414	Transcriptional regulator
AM341_RS11795	COG2224	Isocitrate lyase
AM341_RS11800	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AM341_RS11810	COG0456	acetyltransferase
AM341_RS11850	COG0151	Belongs to the GarS family
AM341_RS11855	COG2204	response regulator
AM341_RS11860	COG4191	Histidine kinase
AM341_RS11870	COG3678	ATP-independent chaperone mediated protein folding
AM341_RS11885	COG3068	Protein conserved in bacteria
AM341_RS11920	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM341_RS11925	COG2104	thiamine diphosphate biosynthetic process
AM341_RS11935	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AM341_RS11980	COG0250	Participates in transcription elongation, termination and antitermination
AM341_RS11985	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AM341_RS12030	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AM341_RS12030	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AM341_RS12035	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AM341_RS12065	COG4206	TonB-dependent receptor
AM341_RS12095	COG0583	DNA-binding transcription factor activity
AM341_RS12110	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AM341_RS12130	COG2194	sulfuric ester hydrolase activity
AM341_RS12135	COG2207	Transcriptional regulator
AM341_RS12140	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS12145	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM341_RS12150	COG1882	Formate acetyltransferase
AM341_RS12155	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS12160	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS12165	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS12165	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM341_RS12165	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS12170	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM341_RS12175	COG0371	Dehydrogenase
AM341_RS12180	COG3738	Protein conserved in bacteria
AM341_RS12185	COG0697	spore germination
AM341_RS12195	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AM341_RS12200	COG0527	aspartate kinase activity
AM341_RS12200	COG0460	homoserine dehydrogenase
AM341_RS12205	COG0626	cystathionine gamma-synthase activity
AM341_RS12215	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
AM341_RS12225	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AM341_RS12230	COG1609	Transcriptional regulator
AM341_RS12235	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM341_RS12250	COG1575	Belongs to the MenA family. Type 1 subfamily
AM341_RS12265	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AM341_RS12275	COG1494	fructose-1,6-bisphosphatase
AM341_RS12280	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM341_RS12285	COG0589	response to stress
AM341_RS12290	COG3691	Protein conserved in bacteria
AM341_RS12295	COG3152	Membrane
AM341_RS12315	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AM341_RS12330	COG3678	ATP-independent chaperone mediated protein folding
AM341_RS12335	COG0745	RESPONSE REGULATOR receiver
AM341_RS12340	COG2205	protein histidine kinase activity
AM341_RS12345	COG2258	MOSC domain
AM341_RS12360	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AM341_RS12400	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS12405	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS12405	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS12410	COG1363	Peptidase, m42
AM341_RS12415	COG3711	transcriptional antiterminator
AM341_RS12415	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS12435	COG0243	molybdopterin cofactor binding
AM341_RS12435	COG3383	formate dehydrogenase (NAD+) activity
AM341_RS12440	COG3383	formate dehydrogenase (NAD+) activity
AM341_RS12440	COG0243	molybdopterin cofactor binding
AM341_RS12445	COG0437	4 iron, 4 sulfur cluster binding
AM341_RS12450	COG2864	formate dehydrogenase
AM341_RS12460	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM341_RS12465	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM341_RS12470	COG0456	acetyltransferase
AM341_RS12485	COG1011	Hydrolase
AM341_RS12490	COG1349	DNA-binding transcription factor activity
AM341_RS12495	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM341_RS12500	COG2084	Dehydrogenase
AM341_RS12505	COG3684	Belongs to the aldolase LacD family
AM341_RS12510	COG2942	2-epimerase
AM341_RS12515	COG2017	converts alpha-aldose to the beta-anomer
AM341_RS12520	COG1501	Belongs to the glycosyl hydrolase 31 family
AM341_RS12525	COG2211	Major facilitator Superfamily
AM341_RS12530	COG2211	Major facilitator Superfamily
AM341_RS12535	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AM341_RS12540	COG2271	Major facilitator Superfamily
AM341_RS12545	COG1082	Xylose isomerase domain protein TIM barrel
AM341_RS12550	COG2188	Transcriptional regulator
AM341_RS12555	COG1217	gtp-binding protein TYPA
AM341_RS12565	COG0174	glutamine synthetase
AM341_RS12570	COG3852	Histidine kinase
AM341_RS12575	COG2204	response regulator
AM341_RS12585	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM341_RS12605	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AM341_RS12605	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AM341_RS12615	COG0204	Acyl-transferase
AM341_RS12620	COG5339	Protein conserved in bacteria
AM341_RS12625	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM341_RS12630	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AM341_RS12635	COG3084	Protein conserved in bacteria
AM341_RS12640	COG0746	molybdenum cofactor guanylyltransferase activity
AM341_RS12645	COG1763	Mo-molybdopterin cofactor biosynthetic process
AM341_RS12675	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
AM341_RS12680	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AM341_RS12685	COG1739	Uncharacterized protein family UPF0029
AM341_RS12700	COG0183	Belongs to the thiolase family
AM341_RS12705	COG0543	2 iron, 2 sulfur cluster binding
AM341_RS12710	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM341_RS12715	COG0250	Participates in transcription elongation, termination and antitermination
AM341_RS12720	COG0084	hydrolase, TatD family'
AM341_RS12725	COG0805	protein transport
AM341_RS12730	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AM341_RS12735	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AM341_RS12745	COG3165	ubiquinone biosynthetic process from chorismate
AM341_RS12755	COG1322	Protein conserved in bacteria
AM341_RS12760	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
AM341_RS12765	COG0412	Dienelactone hydrolase
AM341_RS12775	COG0583	DNA-binding transcription factor activity
AM341_RS12780	COG0697	spore germination
AM341_RS12785	COG0561	phosphatase activity
AM341_RS12790	COG2267	carboxylic ester hydrolase activity
AM341_RS12795	COG1280	lysine exporter protein (LysE YggA)
AM341_RS12800	COG1280	lysine exporter protein (LysE YggA)
AM341_RS12805	COG0514	ATP-dependent DNA helicase (RecQ)
AM341_RS12810	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
AM341_RS12815	COG2050	protein possibly involved in aromatic compounds catabolism
AM341_RS12820	COG2962	Rard protein
AM341_RS12835	COG0598	Magnesium transport protein CorA
AM341_RS12840	COG3698	Phosphodiester glycosidase
AM341_RS12845	COG0210	DNA helicase
AM341_RS12850	COG1011	Hydrolase
AM341_RS12860	COG3159	Protein conserved in bacteria
AM341_RS12870	COG5567	small periplasmic lipoprotein
AM341_RS12880	COG3072	Adenylate cyclase
AM341_RS12895	COG1587	Uroporphyrinogen-III synthase
AM341_RS12900	COG2959	enzyme of heme biosynthesis
AM341_RS12905	COG3071	HemY protein
AM341_RS12910	COG3119	arylsulfatase activity
AM341_RS12915	COG0641	radical SAM
AM341_RS12940	COG1113	amino acid transport
AM341_RS12960	COG2244	polysaccharide biosynthetic process
AM341_RS12965	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AM341_RS12970	COG0456	acetyltransferase
AM341_RS12975	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AM341_RS12980	COG1088	dTDP-glucose 4,6-dehydratase activity
AM341_RS12985	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AM341_RS12990	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AM341_RS12995	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
AM341_RS13000	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AM341_RS13010	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AM341_RS13020	COG3118	belongs to the thioredoxin family
AM341_RS13040	COG0210	DNA helicase
AM341_RS13050	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM341_RS13060	COG0583	DNA-binding transcription factor activity
AM341_RS13065	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM341_RS13075	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AM341_RS13080	COG3978	acetolactate synthase activity
AM341_RS13100	COG0606	chelatase, subunit chli
AM341_RS13105	COG3085	chromosome segregation
AM341_RS13145	COG2186	Transcriptional regulator
AM341_RS13150	COG0477	Major facilitator Superfamily
AM341_RS13155	COG1609	Transcriptional regulator
AM341_RS13160	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM341_RS13165	COG1879	ABC-type sugar transport system periplasmic component
AM341_RS13170	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM341_RS13175	COG1129	ABC transporter
AM341_RS13205	COG1522	sequence-specific DNA binding
AM341_RS13210	COG0716	FMN binding
AM341_RS13225	COG3312	ion transport
AM341_RS13275	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AM341_RS13280	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AM341_RS13285	COG0573	inorganic phosphate transmembrane transporter activity
AM341_RS13290	COG0581	inorganic phosphate transmembrane transporter activity
AM341_RS13295	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AM341_RS13300	COG0704	Plays a role in the regulation of phosphate uptake
AM341_RS13305	COG3711	transcriptional antiterminator
AM341_RS13310	COG2190	(PTS) system
AM341_RS13310	COG1263	PTS System
AM341_RS13310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS13315	COG2723	6-phospho-beta-galactosidase activity
AM341_RS13325	COG2382	esterase
AM341_RS13330	COG0363	glucosamine-6-phosphate deaminase activity
AM341_RS13335	COG3196	Protein conserved in bacteria
AM341_RS13345	COG3436	PFAM IS66 Orf2 family protein
AM341_RS13350	COG4372	Transposase
AM341_RS13365	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM341_RS13370	COG2252	PERMEase
AM341_RS13375	COG0431	NADPH-dependent FMN reductase
AM341_RS13380	COG2091	lysine biosynthetic process via aminoadipic acid
AM341_RS13395	COG0814	amino acid
AM341_RS13445	COG0592	DNA-directed DNA polymerase activity
AM341_RS13455	COG0187	DNA topoisomerase II activity
AM341_RS13460	COG3753	Protein conserved in bacteria
AM341_RS13465	COG0561	phosphatase activity
AM341_RS13475	COG2186	Transcriptional regulator
AM341_RS13480	COG3734	2-keto-3-deoxy-galactonokinase
AM341_RS13485	COG0800	Aldolase
AM341_RS13495	COG2271	Major facilitator Superfamily
AM341_RS13500	COG0644	oxidoreductase
AM341_RS13505	COG0823	Involved in the tonB-independent uptake of proteins
AM341_RS13510	COG5645	(Lipo)protein
AM341_RS13530	COG2188	Transcriptional regulator
AM341_RS13545	COG2207	Transcriptional regulator
AM341_RS13550	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AM341_RS13555	COG3119	arylsulfatase activity
AM341_RS13565	COG2149	membrane
AM341_RS13575	COG0641	radical SAM
AM341_RS13580	COG2814	Major facilitator Superfamily
AM341_RS13620	COG0028	Belongs to the TPP enzyme family
AM341_RS13625	COG0440	acetolactate synthase activity
AM341_RS13630	COG2197	response regulator
AM341_RS13635	COG3851	Histidine kinase
AM341_RS13640	COG2271	Major facilitator Superfamily
AM341_RS13645	COG2271	Major facilitator Superfamily
AM341_RS13655	COG2252	PERMEase
AM341_RS13685	COG1464	Belongs to the NlpA lipoprotein family
AM341_RS13690	COG0697	spore germination
AM341_RS13695	COG2814	Major facilitator Superfamily
AM341_RS13710	COG2211	Major facilitator Superfamily
AM341_RS13715	COG1501	Belongs to the glycosyl hydrolase 31 family
AM341_RS13720	COG2982	Protein involved in outer membrane biogenesis
AM341_RS13725	COG2233	PERMEase
AM341_RS13730	COG0786	glutamate:sodium symporter activity
AM341_RS13735	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AM341_RS13740	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM341_RS13745	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM341_RS13755	COG0194	GDP metabolic process
AM341_RS13765	COG2860	membrane
AM341_RS13770	COG3645	SOS response
AM341_RS13780	COG1561	YicC-like family, N-terminal region
AM341_RS13810	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AM341_RS13840	COG1519	Transferase
AM341_RS13845	COG0859	PFAM glycosyl transferase family 9
AM341_RS13850	COG0438	transferase activity, transferring glycosyl groups
AM341_RS13855	COG0515	serine threonine protein kinase
AM341_RS13860	COG1442	glycosyl transferase family 8
AM341_RS13865	COG0438	transferase activity, transferring glycosyl groups
AM341_RS13870	COG1442	glycosyl transferase family 8
AM341_RS13875	COG1442	glycosyl transferase family 8
AM341_RS13880	COG3642	lipopolysaccharide core region biosynthetic process
AM341_RS13900	COG0859	PFAM glycosyl transferase family 9
AM341_RS13905	COG0859	PFAM glycosyl transferase family 9
AM341_RS13915	COG0156	8-amino-7-oxononanoate synthase activity
AM341_RS13925	COG1216	Glycosyl transferase, family 2
AM341_RS13930	COG2861	carbohydrate metabolic process
AM341_RS13935	COG4942	peptidase
AM341_RS13950	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM341_RS13955	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM341_RS13970	COG1045	serine acetyltransferase
AM341_RS13975	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AM341_RS13985	COG2186	Transcriptional regulator
AM341_RS13990	COG1620	l-lactate permease
AM341_RS14010	COG3722	fumarate hydratase activity
AM341_RS14020	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS14020	COG2213	PTS system mannitol-specific
AM341_RS14030	COG1566	PFAM secretion protein HlyD family protein
AM341_RS14050	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM341_RS14075	COG1413	lyase activity
AM341_RS14080	COG3209	COG3209 Rhs family protein
AM341_RS14085	COG0625	glutathione transferase activity
AM341_RS14095	COG3276	selenocysteine insertion sequence binding
AM341_RS14100	COG1454	alcohol dehydrogenase
AM341_RS14105	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS14125	COG1566	PFAM secretion protein HlyD family protein
AM341_RS14130	COG0583	DNA-binding transcription factor activity
AM341_RS14135	COG3713	MltA-interacting MipA family protein
AM341_RS14145	COG0235	Class ii aldolase
AM341_RS14150	COG3623	hexulose-6-phosphate isomerase
AM341_RS14155	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
AM341_RS14160	COG1070	Carbohydrate kinase
AM341_RS14165	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AM341_RS14170	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AM341_RS14175	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AM341_RS14180	COG2731	YhcH YjgK YiaL family protein
AM341_RS14190	COG1414	Transcriptional regulator
AM341_RS14195	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS14200	COG3977	Valine--pyruvate aminotransferase
AM341_RS14205	COG0366	Alpha amylase catalytic
AM341_RS14210	COG2992	FlgJ-related protein
AM341_RS14215	COG1609	Transcriptional regulator
AM341_RS14215	COG2207	Transcriptional regulator
AM341_RS14220	COG4214	carbohydrate transport
AM341_RS14225	COG1129	ABC transporter
AM341_RS14230	COG4213	ABC transporter substrate-binding protein
AM341_RS14240	COG1070	Carbohydrate kinase
AM341_RS14245	COG4682	membrane
AM341_RS14250	COG4682	membrane
AM341_RS14255	COG3274	enterobacterial common antigen metabolic process
AM341_RS14285	COG1278	Cold shock
AM341_RS14290	COG2944	sequence-specific DNA binding
AM341_RS14305	COG2885	chlorophyll binding
AM341_RS14310	COG0243	molybdopterin cofactor binding
AM341_RS14315	COG0456	acetyltransferase
AM341_RS14320	COG2818	Glycosylase
AM341_RS14325	COG5571	outer membrane autotransporter
AM341_RS14335	COG2223	nitrite transmembrane transporter activity
AM341_RS14340	COG2194	sulfuric ester hydrolase activity
AM341_RS14360	COG0747	negative chemotaxis
AM341_RS14365	COG0601	transmembrane transport
AM341_RS14370	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM341_RS14375	COG0444	Belongs to the ABC transporter superfamily
AM341_RS14380	COG4608	Belongs to the ABC transporter superfamily
AM341_RS14385	COG0814	amino acid
AM341_RS14405	COG2194	sulfuric ester hydrolase activity
AM341_RS14430	COG1215	transferase activity, transferring glycosyl groups
AM341_RS14435	COG1215	transferase activity, transferring glycosyl groups
AM341_RS14440	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AM341_RS14445	COG3118	belongs to the thioredoxin family
AM341_RS14445	COG0457	Tetratricopeptide repeat
AM341_RS14450	COG2200	EAL domain
AM341_RS14450	COG2199	diguanylate cyclase activity
AM341_RS14465	COG0612	Peptidase, M16
AM341_RS14470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM341_RS14480	COG2200	EAL domain
AM341_RS14485	COG2982	Protein involved in outer membrane biogenesis
AM341_RS14490	COG0477	Major facilitator Superfamily
AM341_RS14495	COG1295	ribonuclease BN
AM341_RS14500	COG0583	DNA-binding transcription factor activity
AM341_RS14505	COG2197	response regulator
AM341_RS14515	COG1858	cytochrome C peroxidase
AM341_RS14520	COG0076	glutamate decarboxylase activity
AM341_RS14525	COG2207	Transcriptional regulator
AM341_RS14530	COG2207	Transcriptional regulator
AM341_RS14540	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM341_RS14545	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM341_RS14555	COG2771	luxR family
AM341_RS14560	COG3247	response to pH
AM341_RS14575	COG1285	pathogenesis
AM341_RS14580	COG2197	response regulator
AM341_RS14590	COG3065	identical protein binding
AM341_RS14600	COG1393	Belongs to the ArsC family
AM341_RS14605	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM341_RS14610	COG0640	Transcriptional regulator
AM341_RS14625	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM341_RS14630	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AM341_RS14635	COG0339	signal peptide processing
AM341_RS14645	COG3104	oligopeptide transport
AM341_RS14655	COG0589	response to stress
AM341_RS14665	COG0306	phosphate transporter
AM341_RS14670	COG2081	HI0933 family
AM341_RS14695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM341_RS14700	COG1129	ABC transporter
AM341_RS14700	COG0842	Transport permease protein
AM341_RS14705	COG0842	Transport permease protein
AM341_RS14710	COG5433	transposase activity
AM341_RS14715	COG1413	lyase activity
AM341_RS14725	COG3209	COG3209 Rhs family protein
AM341_RS14735	COG1124	(ABC) transporter
AM341_RS14740	COG0444	Belongs to the ABC transporter superfamily
AM341_RS14745	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM341_RS14750	COG0601	transmembrane transport
AM341_RS14755	COG0747	negative chemotaxis
AM341_RS14760	COG2091	lysine biosynthetic process via aminoadipic acid
AM341_RS14765	COG0628	permease
AM341_RS14770	COG0477	Major facilitator Superfamily
AM341_RS14780	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AM341_RS14790	COG2217	Heavy metal translocating P-type atpase
AM341_RS14795	COG3714	YhhN family
AM341_RS14805	COG3776	membrane
AM341_RS14810	COG0742	ribosomal rna small subunit methyltransferase
AM341_RS14815	COG0552	protein localization to endoplasmic reticulum
AM341_RS14820	COG2884	Cell division ATP-binding protein ftsE
AM341_RS14825	COG2177	Part of the ABC transporter FtsEX involved in
AM341_RS14830	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM341_RS14835	COG0683	leucine binding
AM341_RS14840	COG0456	acetyltransferase
AM341_RS14850	COG0683	leucine binding
AM341_RS14855	COG0559	Belongs to the binding-protein-dependent transport system permease family
AM341_RS14860	COG4177	L-phenylalanine transmembrane transporter activity
AM341_RS14865	COG0411	ABC transporter
AM341_RS14870	COG0410	ABC transporter
AM341_RS14875	COG1653	transport
AM341_RS14880	COG1175	transmembrane transport
AM341_RS14885	COG0395	ABC-type sugar transport system, permease component
AM341_RS14890	COG3842	ATPase activity
AM341_RS14895	COG0584	glycerophosphoryl diester phosphodiesterase
AM341_RS14905	COG0405	Gamma-glutamyltransferase
AM341_RS14925	COG3157	Type VI secretion system effector, Hcp
AM341_RS14930	COG1247	-acetyltransferase
AM341_RS14940	COG0673	inositol 2-dehydrogenase activity
AM341_RS14945	COG1741	Belongs to the pirin family
AM341_RS14950	COG1609	Transcriptional regulator
AM341_RS14955	COG3265	gluconokinase activity
AM341_RS14960	COG2610	gluconate transmembrane transporter activity
AM341_RS14965	COG2095	MarC family integral membrane protein
AM341_RS14970	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM341_RS14995	COG0058	SHG alpha-glucan phosphorylase activity
AM341_RS15000	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AM341_RS15005	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM341_RS15020	COG1349	DNA-binding transcription factor activity
AM341_RS15025	COG4650	regulator
AM341_RS15030	COG1690	Belongs to the RtcB family
AM341_RS15045	COG0058	SHG alpha-glucan phosphorylase activity
AM341_RS15050	COG1640	4-alpha-glucanotransferase
AM341_RS15055	COG2610	gluconate transmembrane transporter activity
AM341_RS15065	COG1040	competence protein
AM341_RS15075	COG5464	transposase or invertase
AM341_RS15090	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
AM341_RS15095	COG1918	ferrous iron import across plasma membrane
AM341_RS15105	COG2183	response to ionizing radiation
AM341_RS15110	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM341_RS15140	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AM341_RS15150	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AM341_RS15155	COG1011	Hydrolase
AM341_RS15165	COG0494	nUDIX hydrolase
AM341_RS15170	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AM341_RS15175	COG4972	Pilus assembly protein
AM341_RS15180	COG3166	PFAM Fimbrial assembly family protein
AM341_RS15195	COG4796	Type ii and iii secretion system protein
AM341_RS15210	COG3266	domain, Protein
AM341_RS15215	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AM341_RS15220	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM341_RS15225	COG0546	phosphoglycolate phosphatase activity
AM341_RS15230	COG0180	Tryptophanyl-tRNA synthetase
AM341_RS15240	COG2188	Transcriptional regulator
AM341_RS15250	COG3457	Alanine racemase
AM341_RS15255	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AM341_RS15260	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AM341_RS15275	COG0626	cystathionine gamma-synthase activity
AM341_RS15280	COG2188	Transcriptional regulator
AM341_RS15285	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM341_RS15290	COG1082	Xylose isomerase domain protein TIM barrel
AM341_RS15300	COG2222	sugar isomerase
AM341_RS15305	COG0531	amino acid
AM341_RS15320	COG2116	formate transmembrane transporter activity
AM341_RS15325	COG2146	nitrite reductase [NAD(P)H] activity
AM341_RS15330	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM341_RS15340	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AM341_RS15350	COG2184	nucleotidyltransferase activity
AM341_RS15355	COG0512	Glutamine amidotransferase of anthranilate synthase
AM341_RS15360	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AM341_RS15365	COG1289	transmembrane transporter activity
AM341_RS15370	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM341_RS15380	COG1765	OsmC-like protein
AM341_RS15385	COG3954	Phosphoribulokinase
AM341_RS15395	COG0429	hydrolase of the alpha beta-hydrolase fold
AM341_RS15400	COG0488	(ABC) transporter
AM341_RS15420	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AM341_RS15425	COG1047	Peptidyl-prolyl cis-trans
AM341_RS15435	COG0545	Peptidyl-prolyl cis-trans isomerase
AM341_RS15440	COG2964	Protein conserved in bacteria
AM341_RS15485	COG3979	chitinase
AM341_RS15490	COG2906	2 iron, 2 sulfur cluster binding
AM341_RS15495	COG2193	ferroxidase activity
AM341_RS15500	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AM341_RS15505	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AM341_RS15510	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AM341_RS15520	COG4795	General secretion pathway protein
AM341_RS15525	COG2165	general secretion pathway protein
AM341_RS15530	COG2165	general secretion pathway protein
AM341_RS15535	COG2165	general secretion pathway protein
AM341_RS15540	COG1459	type II secretion system
AM341_RS15545	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AM341_RS15550	COG1450	Type ii and iii secretion system protein
AM341_RS15555	COG3031	protein transport across the cell outer membrane
AM341_RS15560	COG3409	Peptidoglycan-binding domain 1 protein
AM341_RS15560	COG3267	Type II secretory pathway component ExeA
AM341_RS15590	COG0089	rRNA binding
AM341_RS15680	COG0201	protein transport
AM341_RS15720	COG0789	Transcriptional regulator
AM341_RS15725	COG3036	rescue of stalled ribosome
AM341_RS15735	COG0569	domain protein
AM341_RS15755	COG0758	DNA mediated transformation
AM341_RS15765	COG0551	DNA topoisomerase type I activity
AM341_RS15785	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM341_RS15825	COG1126	abc transporter atp-binding protein
AM341_RS15830	COG0765	amino acid transport
AM341_RS15835	COG4597	amino acid ABC transporter
AM341_RS15840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM341_RS15860	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM341_RS15875	COG2189	Belongs to the N(4) N(6)-methyltransferase family
AM341_RS15885	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM341_RS15895	COG4145	pantothenate transmembrane transporter activity
AM341_RS15900	COG3924	membrane
AM341_RS15905	COG0439	Biotin carboxylase
AM341_RS15910	COG0511	ligase activity, forming carbon-carbon bonds
AM341_RS15920	COG0604	alcohol dehydrogenase
AM341_RS15925	COG2200	EAL domain
AM341_RS15925	COG2199	diguanylate cyclase activity
AM341_RS15940	COG1077	Cell shape determining protein MreB Mrl
AM341_RS15945	COG1792	Involved in formation and maintenance of cell shape
AM341_RS15950	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AM341_RS15955	COG0424	maF-like protein
AM341_RS15960	COG1530	ribonuclease E activity
AM341_RS15965	COG3164	Protein of unknown function
AM341_RS15970	COG0312	modulator of DNA gyrase
AM341_RS15975	COG0583	DNA-binding transcription factor activity
AM341_RS15995	COG2732	(Barnase) inhibitor
AM341_RS16015	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM341_RS16020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM341_RS16025	COG3105	Protein conserved in bacteria
AM341_RS16030	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AM341_RS16050	COG0625	glutathione transferase activity
AM341_RS16055	COG2969	positive regulation of protein catabolic process
AM341_RS16060	COG3069	C4-dicarboxylate transmembrane transporter activity
AM341_RS16095	COG2731	YhcH YjgK YiaL family protein
AM341_RS16100	COG4804	nuclease activity
AM341_RS16115	COG3344	reverse transcriptase
AM341_RS16130	COG3539	Fimbrial protein
AM341_RS16140	COG3188	usher protein
AM341_RS16145	COG3121	Chaperone
AM341_RS16150	COG3539	Fimbrial protein
AM341_RS16160	COG0493	'glutamate synthase
AM341_RS16165	COG0070	glutamate synthase
AM341_RS16165	COG0067	glutamate synthase
AM341_RS16165	COG0069	glutamate synthase activity
AM341_RS16180	COG1242	4 iron, 4 sulfur cluster binding
AM341_RS16185	COG0784	Response regulator, receiver
AM341_RS16185	COG5002	protein histidine kinase activity
AM341_RS16185	COG2198	Histidine kinase
AM341_RS16190	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AM341_RS16200	COG0515	serine threonine protein kinase
AM341_RS16205	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS16220	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM341_RS16225	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AM341_RS16230	COG1137	ATPase activity
AM341_RS16235	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AM341_RS16240	COG3117	lipopolysaccharide transmembrane transporter activity
AM341_RS16245	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AM341_RS16250	COG0517	IMP dehydrogenase activity
AM341_RS16250	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AM341_RS16255	COG0530	calcium, potassium:sodium antiporter activity
AM341_RS16260	COG1127	ABC transporter
AM341_RS16265	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AM341_RS16270	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM341_RS16275	COG2854	intermembrane phospholipid transfer
AM341_RS16280	COG3113	response to antibiotic
AM341_RS16285	COG5007	Belongs to the BolA IbaG family
AM341_RS16295	COG3423	Transcriptional regulator
AM341_RS16300	COG0142	geranyltranstransferase activity
AM341_RS16315	COG0697	spore germination
AM341_RS16325	COG2027	D-alanyl-D-alanine carboxypeptidase
AM341_RS16330	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM341_RS16335	COG1534	Rna-binding protein
AM341_RS16345	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AM341_RS16350	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AM341_RS16360	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AM341_RS16370	COG2194	sulfuric ester hydrolase activity
AM341_RS16390	COG0195	Participates in both transcription termination and antitermination
AM341_RS16430	COG0513	Belongs to the DEAD box helicase family
AM341_RS16435	COG0814	amino acid
AM341_RS16440	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM341_RS16445	COG0826	peptidase U32
AM341_RS16450	COG0826	peptidase U32
AM341_RS16455	COG3154	lipid carrier protein
AM341_RS16460	COG3153	acetyltransferase
AM341_RS16475	COG0693	protein deglycase activity
AM341_RS16480	COG0702	epimerase
AM341_RS16485	COG0701	Predicted permease
AM341_RS16490	COG2823	Periplasmic or secreted lipoprotein
AM341_RS16505	COG3107	peptidoglycan biosynthetic process
AM341_RS16510	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AM341_RS16515	COG3539	Fimbrial protein
AM341_RS16520	COG3188	usher protein
AM341_RS16525	COG3121	Chaperone
AM341_RS16530	COG3539	Fimbrial protein
AM341_RS16535	COG0363	glucosamine-6-phosphate deaminase activity
AM341_RS16540	COG3716	PTS system mannose fructose sorbose family IID component
AM341_RS16545	COG3715	PTS system
AM341_RS16560	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS16570	COG2222	sugar isomerase
AM341_RS16575	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM341_RS16580	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS16585	COG3716	PTS system mannose fructose sorbose family IID component
AM341_RS16595	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS16610	COG1349	DNA-binding transcription factor activity
AM341_RS16620	COG2002	toxin-antitoxin pair type II binding
AM341_RS16625	COG2721	sulfolactate sulfo-lyase activity
AM341_RS16630	COG2271	Major facilitator Superfamily
AM341_RS16640	COG2084	Dehydrogenase
AM341_RS16645	COG1929	Belongs to the glycerate kinase type-1 family
AM341_RS16670	COG0583	DNA-binding transcription factor activity
AM341_RS16680	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM341_RS16690	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AM341_RS16695	COG1882	Formate acetyltransferase
AM341_RS16700	COG0251	oxidation-reduction process
AM341_RS16705	COG1760	l-serine dehydratase
AM341_RS16715	COG0814	amino acid
AM341_RS16730	COG1741	Belongs to the pirin family
AM341_RS16735	COG0583	DNA-binding transcription factor activity
AM341_RS16745	COG3152	Membrane
AM341_RS16765	COG3152	Membrane
AM341_RS16770	COG0435	Glutathione S-transferase
AM341_RS16775	COG2259	Doxx family
AM341_RS16785	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
AM341_RS16790	COG4575	ribosome binding
AM341_RS16795	COG1422	Protein of unknown function (DUF1090)
AM341_RS16805	COG0586	Pfam SNARE associated Golgi protein
AM341_RS16810	COG2186	Transcriptional regulator
AM341_RS16815	COG2271	Major facilitator Superfamily
AM341_RS16825	COG2721	sulfolactate sulfo-lyase activity
AM341_RS16835	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
AM341_RS16840	COG0861	Integral membrane protein TerC family
AM341_RS16845	COG0673	inositol 2-dehydrogenase activity
AM341_RS16850	COG2949	membrane
AM341_RS16855	COG1451	nucleotide metabolic process
AM341_RS16870	COG4680	protein conserved in bacteria
AM341_RS16875	COG5499	transcription regulator containing HTH domain
AM341_RS16880	COG1902	pentaerythritol trinitrate reductase activity
AM341_RS16880	COG0446	pyridine nucleotide-disulphide oxidoreductase
AM341_RS16885	COG3408	Glycogen debranching enzyme
AM341_RS16885	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
AM341_RS16895	COG0531	amino acid
AM341_RS16900	COG2731	YhcH YjgK YiaL family protein
AM341_RS16905	COG3250	beta-galactosidase activity
AM341_RS16910	COG1609	Transcriptional regulator
AM341_RS16920	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AM341_RS16935	COG0840	transmembrane signaling receptor activity
AM341_RS16940	COG1695	Transcriptional regulator
AM341_RS16945	COG2375	cellular response to nickel ion
AM341_RS16960	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM341_RS16970	COG0358	DNA primase activity
AM341_RS16975	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AM341_RS16990	COG0471	metal ion transport
AM341_RS16995	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM341_RS17000	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM341_RS17010	COG0583	DNA-binding transcription factor activity
AM341_RS17020	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM341_RS17035	COG4991	sh3 domain protein
AM341_RS17045	COG3025	triphosphatase activity
AM341_RS17070	COG2268	Band 7 protein
AM341_RS17075	COG1585	Membrane protein implicated in regulation of membrane protease activity
AM341_RS17085	COG3539	Fimbrial protein
AM341_RS17090	COG3121	Chaperone
AM341_RS17095	COG3188	usher protein
AM341_RS17100	COG3539	Fimbrial protein
AM341_RS17105	COG2960	long-chain fatty acid transporting porin activity
AM341_RS17125	COG3384	dioxygenase
AM341_RS17130	COG0754	glutathionylspermidine amidase activity
AM341_RS17145	COG1538	Outer membrane efflux protein
AM341_RS17150	COG0494	nUDIX hydrolase
AM341_RS17155	COG3151	Protein conserved in bacteria
AM341_RS17160	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AM341_RS17165	COG3150	esterase
AM341_RS17170	COG0187	DNA topoisomerase II activity
AM341_RS17175	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AM341_RS17180	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM341_RS17195	COG0642	Histidine kinase
AM341_RS17200	COG0745	RESPONSE REGULATOR receiver
AM341_RS17205	COG3111	PFAM Bacterial OB fold (BOF) protein
AM341_RS17210	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AM341_RS17220	COG2944	sequence-specific DNA binding
AM341_RS17225	COG4166	transmembrane transport
AM341_RS17230	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AM341_RS17235	COG0204	Acyl-transferase
AM341_RS17240	COG2132	Multicopper oxidase
AM341_RS17245	COG1032	radical SAM domain protein
AM341_RS17250	COG4238	major outer membrane lipoprotein
AM341_RS17260	COG0656	L-ascorbic acid biosynthetic process
AM341_RS17265	COG1979	alcohol dehydrogenase
AM341_RS17270	COG2207	Transcriptional regulator
AM341_RS17275	COG0586	Pfam SNARE associated Golgi protein
AM341_RS17280	COG0626	cystathionine gamma-synthase activity
AM341_RS17290	COG0811	peptide transport
AM341_RS17295	COG0848	biopolymer transport protein
AM341_RS17300	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS17310	COG0667	Aldo Keto reductase
AM341_RS17335	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AM341_RS17340	COG0437	4 iron, 4 sulfur cluster binding
AM341_RS17345	COG5557	Pfam Polysulphide reductase, NrfD
AM341_RS17350	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AM341_RS17355	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM341_RS17360	COG1773	rubredoxin
AM341_RS17370	COG0298	carbon dioxide binding
AM341_RS17375	COG0625	glutathione transferase activity
AM341_RS17380	COG0754	glutathionylspermidine amidase activity
AM341_RS17385	COG0306	phosphate transporter
AM341_RS17390	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AM341_RS17395	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AM341_RS17400	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AM341_RS17405	COG2244	polysaccharide biosynthetic process
AM341_RS17415	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AM341_RS17420	COG0795	lipopolysaccharide-transporting ATPase activity
AM341_RS17430	COG0156	8-amino-7-oxononanoate synthase activity
AM341_RS17435	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AM341_RS17445	COG0318	PFAM AMP-dependent synthetase and ligase
AM341_RS17450	COG0456	acetyltransferase
AM341_RS17455	COG2186	Transcriptional regulator
AM341_RS17460	COG0277	FAD linked oxidase domain protein
AM341_RS17465	COG0277	FAD linked oxidase domain protein
AM341_RS17470	COG0247	lactate metabolic process
AM341_RS17475	COG3193	protein, possibly involved in utilization of glycolate and propanediol
AM341_RS17480	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AM341_RS17485	COG1620	l-lactate permease
AM341_RS17495	COG3064	Membrane
AM341_RS17500	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AM341_RS17510	COG3031	protein transport across the cell outer membrane
AM341_RS17525	COG1459	type II secretion system
AM341_RS17530	COG2165	general secretion pathway protein
AM341_RS17560	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AM341_RS17595	COG2003	Belongs to the UPF0758 family
AM341_RS17620	COG2378	regulation of single-species biofilm formation
AM341_RS17625	COG3596	GTP binding
AM341_RS17670	COG1309	transcriptional regulator
AM341_RS17690	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AM341_RS17695	COG2207	Transcriptional regulator
AM341_RS17700	COG2972	Histidine kinase
AM341_RS17710	COG3344	reverse transcriptase
AM341_RS17730	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM341_RS17735	COG1882	Formate acetyltransferase
AM341_RS17740	COG0693	protein deglycase activity
AM341_RS17750	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS17785	COG4820	ethanolamine utilization protein (EutJ)
AM341_RS17790	COG4869	propanediol catabolic process
AM341_RS17815	COG2831	hemolysin activation secretion protein
AM341_RS17880	COG0604	alcohol dehydrogenase
AM341_RS17895	COG0531	amino acid
AM341_RS17900	COG1982	Orn Lys Arg decarboxylase major
AM341_RS17905	COG0531	amino acid
AM341_RS17935	COG4372	Transposase
AM341_RS17940	COG3436	PFAM IS66 Orf2 family protein
AM341_RS17975	COG1811	Na channel or pump
AM341_RS17985	COG1982	Orn Lys Arg decarboxylase major
AM341_RS17990	COG2211	Major facilitator Superfamily
AM341_RS18005	COG1194	a g-specific adenine glycosylase
AM341_RS18020	COG3171	Protein conserved in bacteria
AM341_RS18030	COG0252	asparaginase activity
AM341_RS18040	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM341_RS18045	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AM341_RS18055	COG0762	integral membrane protein
AM341_RS18060	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AM341_RS18065	COG2805	Type II/IV secretion system protein
AM341_RS18080	COG0189	ligase activity
AM341_RS18085	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AM341_RS18090	COG2356	endonuclease I
AM341_RS18100	COG2814	Major facilitator Superfamily
AM341_RS18125	COG1166	arginine decarboxylase activity
AM341_RS18135	COG0501	Belongs to the peptidase M48B family
AM341_RS18140	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM341_RS18145	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS18150	COG2213	PTS system mannitol-specific
AM341_RS18155	COG1063	alcohol dehydrogenase
AM341_RS18160	COG1494	fructose-1,6-bisphosphatase
AM341_RS18165	COG3722	fumarate hydratase activity
AM341_RS18170	COG1072	(Pantothenic acid kinase))
AM341_RS18190	COG0191	fructose-bisphosphate aldolase activity
AM341_RS18200	COG0668	transmembrane transport
AM341_RS18205	COG1279	arginine transmembrane transporter activity
AM341_RS18220	COG0583	DNA-binding transcription factor activity
AM341_RS18225	COG0427	acetyl-CoA hydrolase
AM341_RS18230	COG1024	Enoyl-CoA hydratase
AM341_RS18235	COG1703	isobutyryl-CoA mutase activity
AM341_RS18240	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AM341_RS18240	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AM341_RS18260	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM341_RS18275	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AM341_RS18300	COG0006	proline dipeptidase activity
AM341_RS18305	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM341_RS18310	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM341_RS18330	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS18335	COG2723	6-phospho-beta-galactosidase activity
AM341_RS18345	COG1272	protein, Hemolysin III
AM341_RS18355	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AM341_RS18365	COG0716	FMN binding
AM341_RS18370	COG4974	Belongs to the 'phage' integrase family
AM341_RS18375	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM341_RS18380	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AM341_RS18390	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AM341_RS18405	COG2233	PERMEase
AM341_RS18415	COG0493	'glutamate synthase
AM341_RS18415	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS18420	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS18425	COG2252	PERMEase
AM341_RS18430	COG0402	S-adenosylhomocysteine deaminase activity
AM341_RS18435	COG2233	PERMEase
AM341_RS18440	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AM341_RS18440	COG2080	2 iron, 2 sulfur cluster binding
AM341_RS18445	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AM341_RS18450	COG0402	S-adenosylhomocysteine deaminase activity
AM341_RS18455	COG0493	'glutamate synthase
AM341_RS18455	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS18460	COG2068	MobA-Related Protein
AM341_RS18465	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AM341_RS18470	COG3608	succinylglutamate desuccinylase aspartoacylase
AM341_RS18470	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AM341_RS18475	COG0549	Belongs to the carbamate kinase family
AM341_RS18485	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AM341_RS18490	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AM341_RS18495	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AM341_RS18500	COG3829	transcription factor binding
AM341_RS18505	COG2080	2 iron, 2 sulfur cluster binding
AM341_RS18510	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AM341_RS18515	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AM341_RS18525	COG4942	peptidase
AM341_RS18535	COG4974	Belongs to the 'phage' integrase family
AM341_RS18565	COG3387	PFAM Glycoside hydrolase 15-related
AM341_RS18570	COG3385	transposase activity
AM341_RS18670	COG2197	response regulator
AM341_RS18675	COG2197	response regulator
AM341_RS18690	COG3710	Transcriptional regulator
AM341_RS18690	COG0457	Tetratricopeptide repeat
AM341_RS18695	COG0457	Tetratricopeptide repeat
AM341_RS18725	COG3710	Transcriptional regulator
AM341_RS18730	COG2771	luxR family
AM341_RS18735	COG0814	amino acid
AM341_RS18740	COG0183	Belongs to the thiolase family
AM341_RS18750	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS18755	COG2814	Major facilitator Superfamily
AM341_RS18760	COG1794	racemase activity, acting on amino acids and derivatives
AM341_RS18765	COG0583	DNA-binding transcription factor activity
AM341_RS18775	COG1609	Transcriptional regulator
AM341_RS18790	COG0667	Aldo Keto reductase
AM341_RS18800	COG0861	Integral membrane protein TerC family
AM341_RS18815	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
AM341_RS18830	COG2165	general secretion pathway protein
AM341_RS18835	COG4795	General secretion pathway protein
AM341_RS18845	COG4967	type IV pilus modification protein PilV
AM341_RS18850	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AM341_RS18855	COG1025	Belongs to the peptidase M16 family
AM341_RS18860	COG1074	ATP-dependent DNA helicase activity
AM341_RS18865	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AM341_RS18870	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AM341_RS18870	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AM341_RS18880	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM341_RS18905	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AM341_RS18910	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AM341_RS18915	COG2166	iron-sulfur cluster assembly
AM341_RS18920	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AM341_RS18930	COG0583	DNA-binding transcription factor activity
AM341_RS18935	COG2363	Small membrane protein
AM341_RS18945	COG1349	DNA-binding transcription factor activity
AM341_RS18955	COG1070	Carbohydrate kinase
AM341_RS18965	COG0738	Major facilitator superfamily
AM341_RS18970	COG0235	Class ii aldolase
AM341_RS18975	COG1454	alcohol dehydrogenase
AM341_RS18985	COG1760	l-serine dehydratase
AM341_RS18990	COG0814	amino acid
AM341_RS18995	COG1611	Belongs to the LOG family
AM341_RS19010	COG3098	single-species biofilm formation
AM341_RS19015	COG0564	pseudouridine synthase activity
AM341_RS19020	COG0716	FMN binding
AM341_RS19025	COG2271	Major facilitator Superfamily
AM341_RS19030	COG4948	Mandelate Racemase Muconate Lactonizing
AM341_RS19035	COG4948	Mandelate Racemase Muconate Lactonizing
AM341_RS19040	COG4999	Histidine kinase
AM341_RS19040	COG3850	Histidine kinase
AM341_RS19040	COG3437	response regulator, receiver
AM341_RS19040	COG2205	protein histidine kinase activity
AM341_RS19045	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AM341_RS19050	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM341_RS19055	COG2336	PFAM SpoVT AbrB
AM341_RS19060	COG2337	Toxic component of a toxin-antitoxin (TA) module
AM341_RS19065	COG3956	TIGRFAM MazG family protein
AM341_RS19080	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AM341_RS19090	COG0602	queuosine metabolic process
AM341_RS19095	COG1070	Carbohydrate kinase
AM341_RS19100	COG2223	nitrite transmembrane transporter activity
AM341_RS19105	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS19110	COG0277	FAD linked oxidase domain protein
AM341_RS19115	COG0477	Major facilitator Superfamily
AM341_RS19120	COG2086	electron transfer activity
AM341_RS19125	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AM341_RS19130	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
AM341_RS19135	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
AM341_RS19140	COG0644	oxidoreductase
AM341_RS19145	COG0720	synthase
AM341_RS19170	COG1203	CRISPR-associated helicase, Cas3
AM341_RS19185	COG1857	crispr-associated protein
AM341_RS19200	COG1518	maintenance of DNA repeat elements
AM341_RS19205	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM341_RS19210	COG2234	aminopeptidase activity
AM341_RS19265	COG1388	LysM domain
AM341_RS19265	COG4942	peptidase
AM341_RS19270	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AM341_RS19275	COG2610	gluconate transmembrane transporter activity
AM341_RS19280	COG3622	Belongs to the hyi family
AM341_RS19285	COG0235	Class ii aldolase
AM341_RS19290	COG3395	kinase activity
AM341_RS19295	COG2084	Dehydrogenase
AM341_RS19300	COG1349	DNA-binding transcription factor activity
AM341_RS19305	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AM341_RS19320	COG3604	Transcriptional regulator
AM341_RS19325	COG0309	Hydrogenase expression formation protein (HypE)
AM341_RS19330	COG0409	Hydrogenase expression formation protein
AM341_RS19335	COG0298	carbon dioxide binding
AM341_RS19340	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AM341_RS19345	COG0375	protein maturation
AM341_RS19355	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS19360	COG0651	ATP synthesis coupled electron transport
AM341_RS19365	COG0650	Formate hydrogenlyase subunit 4
AM341_RS19370	COG3261	NADH dehydrogenase
AM341_RS19370	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AM341_RS19375	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM341_RS19380	COG3260	NADH ubiquinone oxidoreductase 20
AM341_RS19390	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM341_RS19395	COG2723	6-phospho-beta-galactosidase activity
AM341_RS19400	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS19400	COG1263	PTS System
AM341_RS19405	COG1609	Transcriptional regulator
AM341_RS19410	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS19415	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AM341_RS19435	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AM341_RS19435	COG0517	IMP dehydrogenase activity
AM341_RS19440	COG1349	DNA-binding transcription factor activity
AM341_RS19445	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS19450	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS19455	COG3731	PTS system glucitol sorbitol-specific IIA component
AM341_RS19460	COG3732	PTS system glucitol sorbitol-specific
AM341_RS19465	COG3730	PTS system glucitol sorbitol-specific
AM341_RS19470	COG2951	lytic endotransglycosylase activity
AM341_RS19475	COG1546	Belongs to the CinA family
AM341_RS19495	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AM341_RS19525	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM341_RS19530	COG1238	metal cluster binding
AM341_RS19545	COG2814	Major facilitator Superfamily
AM341_RS19550	COG1566	PFAM secretion protein HlyD family protein
AM341_RS19555	COG1846	Transcriptional regulator
AM341_RS19565	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AM341_RS19570	COG2814	Major facilitator Superfamily
AM341_RS19575	COG2113	Glycine betaine
AM341_RS19580	COG4176	ABC-type proline glycine betaine transport system permease component
AM341_RS19585	COG4175	Glycine betaine
AM341_RS19595	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM341_RS19600	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM341_RS19610	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM341_RS19615	COG4575	ribosome binding
AM341_RS19630	COG2916	Histone family protein nucleoid-structuring protein H-NS
AM341_RS19635	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM341_RS19640	COG0640	Transcriptional regulator
AM341_RS19645	COG0401	homolog of Blt101
AM341_RS19650	COG1652	LysM domain
AM341_RS19655	COG1802	Transcriptional regulator
AM341_RS19660	COG1113	amino acid transport
AM341_RS19665	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM341_RS19670	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS19675	COG0579	oxidoreductase
AM341_RS19695	COG0366	Alpha amylase catalytic
AM341_RS19730	COG3468	outer membrane autotransporter barrel domain protein
AM341_RS19745	COG2867	negative regulation of translational initiation
AM341_RS19755	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM341_RS19760	COG0497	DNA recombination
AM341_RS19780	COG4536	flavin adenine dinucleotide binding
AM341_RS19785	COG4137	Cytochrome C assembly protein
AM341_RS19790	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AM341_RS19815	COG2885	chlorophyll binding
AM341_RS19820	COG2199	diguanylate cyclase activity
AM341_RS19835	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM341_RS19840	COG0287	Prephenate dehydrogenase
AM341_RS19840	COG1605	Chorismate mutase
AM341_RS19845	COG1605	Chorismate mutase
AM341_RS19845	COG0077	Prephenate dehydratase
AM341_RS19850	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM341_RS19860	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM341_RS19865	COG0564	pseudouridine synthase activity
AM341_RS19870	COG1496	oxidoreductase activity
AM341_RS19875	COG0542	response to heat
AM341_RS19905	COG0477	Major facilitator Superfamily
AM341_RS19910	COG5544	Lipoprotein
AM341_RS19915	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM341_RS19920	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM341_RS19920	COG1042	CoA-binding domain protein
AM341_RS19920	COG0045	succinate-CoA ligase (ADP-forming) activity
AM341_RS19925	COG3148	PFAM DTW domain containing protein
AM341_RS19930	COG3118	belongs to the thioredoxin family
AM341_RS19940	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM341_RS19960	COG0583	DNA-binding transcription factor activity
AM341_RS19965	COG0513	Belongs to the DEAD box helicase family
AM341_RS19975	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AM341_RS19980	COG1595	DNA-templated transcription, initiation
AM341_RS19985	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
AM341_RS19990	COG3026	antisigma factor binding
AM341_RS19995	COG3086	response to oxidative stress
AM341_RS20005	COG0681	Belongs to the peptidase S26 family
AM341_RS20030	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AM341_RS20055	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS20060	COG1737	Transcriptional regulator
AM341_RS20065	COG0560	Phosphoserine phosphatase
AM341_RS20085	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AM341_RS20085	COG0047	phosphoribosylformylglycinamidine synthase activity
AM341_RS20090	COG2205	protein histidine kinase activity
AM341_RS20095	COG3170	Tfp pilus assembly protein FimV
AM341_RS20100	COG2204	response regulator
AM341_RS20105	COG0347	Belongs to the P(II) protein family
AM341_RS20110	COG1017	nitric oxide dioxygenase activity
AM341_RS20110	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM341_RS20120	COG1940	carbohydrate kinase activity
AM341_RS20125	COG0457	Tetratricopeptide repeat
AM341_RS20130	COG1879	ABC-type sugar transport system periplasmic component
AM341_RS20135	COG1129	ABC transporter
AM341_RS20140	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM341_RS20145	COG1063	alcohol dehydrogenase
AM341_RS20150	COG2017	converts alpha-aldose to the beta-anomer
AM341_RS20155	COG2259	Doxx family
AM341_RS20180	COG4638	Rieske (2fe-2S)
AM341_RS20185	COG0583	DNA-binding transcription factor activity
AM341_RS20190	COG2814	Major facilitator Superfamily
AM341_RS20195	COG3711	transcriptional antiterminator
AM341_RS20200	COG1073	alpha beta
AM341_RS20205	COG0483	inositol monophosphate 1-phosphatase activity
AM341_RS20225	COG0822	iron-sulfur transferase activity
AM341_RS20245	COG0633	Ferredoxin
AM341_RS20250	COG2975	iron-sulfur cluster assembly
AM341_RS20265	COG2897	thiosulfate sulfurtransferase activity
AM341_RS20270	COG2373	Large extracellular alpha-helical protein
AM341_RS20275	COG4953	penicillin-binding protein 1C
AM341_RS20310	COG2976	Protein conserved in bacteria
AM341_RS20325	COG1645	bacterial-type flagellum-dependent swarming motility
AM341_RS20335	COG0516	GMP reductase activity
AM341_RS20335	COG0517	IMP dehydrogenase activity
AM341_RS20350	COG3133	Outer membrane lipoprotein
AM341_RS20370	COG2200	EAL domain
AM341_RS20375	COG0248	Ppx GppA phosphatase
AM341_RS20380	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AM341_RS20385	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AM341_RS20405	COG2233	PERMEase
AM341_RS20415	COG1393	Belongs to the ArsC family
AM341_RS20420	COG4783	chaperone-mediated protein folding
AM341_RS20425	COG0628	permease
AM341_RS20435	COG2116	formate transmembrane transporter activity
AM341_RS20440	COG3604	Transcriptional regulator
AM341_RS20450	COG3260	NADH ubiquinone oxidoreductase 20
AM341_RS20455	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM341_RS20460	COG3261	NADH dehydrogenase
AM341_RS20460	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AM341_RS20465	COG0651	ATP synthesis coupled electron transport
AM341_RS20470	COG4237	Hydrogenase 4 membrane
AM341_RS20475	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AM341_RS20480	COG0650	Formate hydrogenlyase subunit 4
AM341_RS20485	COG0651	ATP synthesis coupled electron transport
AM341_RS20490	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS20495	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AM341_RS20500	COG2716	regulation of RNA biosynthetic process
AM341_RS20510	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AM341_RS20520	COG2321	neutral zinc metallopeptidase
AM341_RS20525	COG1444	tRNA N-acetyltransferase activity
AM341_RS20530	COG0400	carboxylic ester hydrolase activity
AM341_RS20545	COG1393	Belongs to the ArsC family
AM341_RS20555	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM341_RS20560	COG3850	Histidine kinase
AM341_RS20565	COG0493	'glutamate synthase
AM341_RS20565	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS20575	COG5342	invasion associated locus B
AM341_RS20580	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM341_RS20585	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM341_RS20590	COG0280	phosphate acetyltransferase
AM341_RS20590	COG0281	malic enzyme
AM341_RS20595	COG4810	utilization protein
AM341_RS20600	COG4917	ethanolamine utilization protein
AM341_RS20605	COG4766	ethanolamine catabolic process
AM341_RS20610	COG4812	Cobalamin adenosyltransferase
AM341_RS20615	COG0280	phosphate acetyltransferase
AM341_RS20620	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AM341_RS20625	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
AM341_RS20630	COG1012	belongs to the aldehyde dehydrogenase family
AM341_RS20635	COG4820	ethanolamine utilization protein (EutJ)
AM341_RS20640	COG1454	alcohol dehydrogenase
AM341_RS20645	COG3192	ethanolamine utilization protein
AM341_RS20650	COG4819	ethanolamine utilization protein
AM341_RS20655	COG4303	Ethanolamine ammonia lyase large subunit
AM341_RS20665	COG4816	utilization protein
AM341_RS20670	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
AM341_RS20675	COG2207	Transcriptional regulator
AM341_RS20685	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM341_RS20690	COG0456	acetyltransferase
AM341_RS20705	COG2837	iron assimilation
AM341_RS20710	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM341_RS20715	COG1263	PTS System
AM341_RS20715	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS20730	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS20740	COG4150	thiosulfate binding
AM341_RS20745	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AM341_RS20750	COG4208	sulfate ABC transporter
AM341_RS20755	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AM341_RS20760	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AM341_RS20765	COG3831	ATPase activity
AM341_RS20765	COG4884	unkown
AM341_RS20780	COG2190	(PTS) system
AM341_RS20785	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM341_RS20790	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS20795	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AM341_RS20815	COG3530	Putative quorum-sensing-regulated virulence factor
AM341_RS20820	COG0385	Bile acid
AM341_RS20825	COG0583	DNA-binding transcription factor activity
AM341_RS20835	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AM341_RS20840	COG2211	Major facilitator Superfamily
AM341_RS20850	COG0583	DNA-binding transcription factor activity
AM341_RS20880	COG3415	Transposase
AM341_RS20885	COG3415	Transposase
AM341_RS20900	COG2199	diguanylate cyclase activity
AM341_RS20900	COG2200	EAL domain
AM341_RS20905	COG3385	transposase activity
AM341_RS20910	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM341_RS20935	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS20940	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS20945	COG0006	proline dipeptidase activity
AM341_RS20950	COG1363	Peptidase, m42
AM341_RS20955	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM341_RS20955	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS20955	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS20965	COG3279	Response regulator of the LytR AlgR family
AM341_RS20970	COG3275	phosphorelay sensor kinase activity
AM341_RS20975	COG0436	Aminotransferase
AM341_RS20985	COG1560	Kdo2-lipid A biosynthetic process
AM341_RS21010	COG0028	Belongs to the TPP enzyme family
AM341_RS21015	COG0679	Auxin Efflux Carrier
AM341_RS21020	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AM341_RS21025	COG0784	Response regulator, receiver
AM341_RS21025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM341_RS21025	COG2198	Histidine kinase
AM341_RS21025	COG2205	protein histidine kinase activity
AM341_RS21030	COG2197	response regulator
AM341_RS21035	COG1566	PFAM secretion protein HlyD family protein
AM341_RS21040	COG0477	Major facilitator Superfamily
AM341_RS21080	COG2116	formate transmembrane transporter activity
AM341_RS21090	COG2853	Lipoprotein
AM341_RS21105	COG2067	long-chain fatty acid transport protein
AM341_RS21115	COG3691	Protein conserved in bacteria
AM341_RS21130	COG2062	phosphohistidine phosphatase, SixA
AM341_RS21135	COG3539	Fimbrial protein
AM341_RS21140	COG3188	usher protein
AM341_RS21145	COG3121	Chaperone
AM341_RS21150	COG3539	Fimbrial protein
AM341_RS21155	COG3539	Fimbrial protein
AM341_RS21160	COG3539	Fimbrial protein
AM341_RS21175	COG2890	protein-(glutamine-N5) methyltransferase activity
AM341_RS21190	COG0730	response to heat
AM341_RS21195	COG3101	peptidyl-lysine hydroxylation
AM341_RS21210	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM341_RS21220	COG2814	Major facilitator Superfamily
AM341_RS21235	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM341_RS21245	COG0586	Pfam SNARE associated Golgi protein
AM341_RS21255	COG0285	dihydrofolate synthase activity
AM341_RS21260	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AM341_RS21265	COG1286	toxin biosynthetic process
AM341_RS21270	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AM341_RS21275	COG0163	prenyltransferase activity
AM341_RS21280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM341_RS21285	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM341_RS21290	COG4215	(ABC) transporter
AM341_RS21295	COG4160	amino acid transport
AM341_RS21300	COG4598	ABC transporter
AM341_RS21305	COG5464	transposase or invertase
AM341_RS21310	COG1090	epimerase
AM341_RS21315	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM341_RS21320	COG0625	glutathione transferase activity
AM341_RS21325	COG0625	glutathione transferase activity
AM341_RS21330	COG0622	Phosphoesterase
AM341_RS21335	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AM341_RS21340	COG1288	antiporter activity
AM341_RS21345	COG0857	belongs to the CobB CobQ family
AM341_RS21345	COG0280	phosphate acetyltransferase
AM341_RS21350	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AM341_RS21365	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM341_RS21370	COG0490	domain, Protein
AM341_RS21370	COG0471	metal ion transport
AM341_RS21380	COG0436	Aminotransferase
AM341_RS21390	COG0583	DNA-binding transcription factor activity
AM341_RS21410	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
AM341_RS21415	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AM341_RS21420	COG1034	ATP synthesis coupled electron transport
AM341_RS21435	COG0839	Belongs to the complex I subunit 6 family
AM341_RS21445	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AM341_RS21450	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM341_RS21460	COG0457	Tetratricopeptide repeat
AM341_RS21480	COG2234	aminopeptidase activity
AM341_RS21485	COG2304	oxidoreductase activity
AM341_RS21490	COG5160	protein modification by small protein removal
AM341_RS21500	COG2153	protein acetylation
AM341_RS21505	COG4575	ribosome binding
AM341_RS21510	COG1169	isochorismate synthase
AM341_RS21525	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AM341_RS21535	COG0318	PFAM AMP-dependent synthetase and ligase
AM341_RS21610	COG2271	Major facilitator Superfamily
AM341_RS21625	COG5464	transposase or invertase
AM341_RS21630	COG0247	lactate metabolic process
AM341_RS21640	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM341_RS21645	COG2271	Major facilitator Superfamily
AM341_RS21650	COG0584	glycerophosphoryl diester phosphodiesterase
AM341_RS21655	COG0583	DNA-binding transcription factor activity
AM341_RS21660	COG3642	lipopolysaccharide core region biosynthetic process
AM341_RS21665	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM341_RS21670	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM341_RS21675	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM341_RS21685	COG3468	outer membrane autotransporter barrel domain protein
AM341_RS21695	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AM341_RS21700	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
AM341_RS21705	COG3234	Protein of unknown function (DUF1175)
AM341_RS21710	COG2373	Large extracellular alpha-helical protein
AM341_RS21715	COG5445	Predicted secreted protein (DUF2300)
AM341_RS21720	COG4676	Protein conserved in bacteria
AM341_RS21725	COG0183	Belongs to the thiolase family
AM341_RS21730	COG2031	fatty acid transporter
AM341_RS21735	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AM341_RS21740	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AM341_RS21745	COG2204	response regulator
AM341_RS21750	COG3852	Histidine kinase
AM341_RS21755	COG0784	Response regulator, receiver
AM341_RS21755	COG2205	protein histidine kinase activity
AM341_RS21760	COG2197	response regulator
AM341_RS21765	COG0642	Histidine kinase
AM341_RS21765	COG2198	Histidine kinase
AM341_RS21780	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM341_RS21785	COG1477	protein flavinylation
AM341_RS21790	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM341_RS21790	COG2169	Transcriptional regulator
AM341_RS21795	COG3145	DNA-N1-methyladenine dioxygenase activity
AM341_RS21800	COG4615	Cyclic peptide transporter
AM341_RS21820	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS21820	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM341_RS21825	COG3062	negative regulation of establishment of protein localization
AM341_RS21835	COG0437	4 iron, 4 sulfur cluster binding
AM341_RS21840	COG0348	domain, Protein
AM341_RS21845	COG3043	anaerobic respiration
AM341_RS21850	COG3005	denitrification pathway
AM341_RS21855	COG4133	protoheme IX ABC transporter activity
AM341_RS21860	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM341_RS21865	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM341_RS21870	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM341_RS21880	COG1138	Cytochrome C-type biogenesis protein
AM341_RS21885	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM341_RS21890	COG4235	cytochrome complex assembly
AM341_RS21890	COG3088	subunit of a heme lyase
AM341_RS21895	COG2197	response regulator
AM341_RS21905	COG3468	outer membrane autotransporter barrel domain protein
AM341_RS21920	COG3083	sulfuric ester hydrolase activity
AM341_RS21940	COG1061	Type III restriction enzyme res subunit
AM341_RS21950	COG1187	pseudouridine synthase activity
AM341_RS21955	COG2814	Major facilitator Superfamily
AM341_RS21970	COG4172	Belongs to the ABC transporter superfamily
AM341_RS21975	COG4239	(ABC) transporter, permease
AM341_RS21980	COG4174	ABC transporter (Permease)
AM341_RS21985	COG4166	transmembrane transport
AM341_RS21990	COG2200	EAL domain
AM341_RS21995	COG0791	NLP P60 protein
AM341_RS22000	COG0671	phosphoesterase, PA-phosphatase related
AM341_RS22005	COG0523	cobalamin synthesis protein
AM341_RS22010	COG0246	Mannitol dehydrogenase
AM341_RS22025	COG2814	Major facilitator Superfamily
AM341_RS22030	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS22030	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS22035	COG1105	Belongs to the carbohydrate kinase PfkB family
AM341_RS22040	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AM341_RS22040	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS22040	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM341_RS22045	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM341_RS22050	COG2313	pseudouridylate synthase activity
AM341_RS22055	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM341_RS22060	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM341_RS22070	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM341_RS22075	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM341_RS22075	COG1522	sequence-specific DNA binding
AM341_RS22085	COG2855	membrane
AM341_RS22090	COG0583	DNA-binding transcription factor activity
AM341_RS22100	COG0833	amino acid
AM341_RS22110	COG4771	TonB-dependent receptor
AM341_RS22135	COG2311	Membrane
AM341_RS22145	COG1609	Transcriptional regulator
AM341_RS22150	COG1879	ABC-type sugar transport system periplasmic component
AM341_RS22155	COG1129	ABC transporter
AM341_RS22160	COG4211	Belongs to the binding-protein-dependent transport system permease family
AM341_RS22165	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AM341_RS22165	COG0167	dihydroorotate dehydrogenase activity
AM341_RS22170	COG0493	'glutamate synthase
AM341_RS22180	COG2949	membrane
AM341_RS22190	COG1346	cytolysis
AM341_RS22200	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM341_RS22225	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS22230	COG0586	Pfam SNARE associated Golgi protein
AM341_RS22240	COG1686	Belongs to the peptidase S11 family
AM341_RS22245	COG0277	FAD linked oxidase domain protein
AM341_RS22250	COG1472	Belongs to the glycosyl hydrolase 3 family
AM341_RS22255	COG1732	Glycine betaine
AM341_RS22260	COG1174	glycine betaine transport
AM341_RS22265	COG1125	glycine betaine transport
AM341_RS22270	COG1174	glycine betaine transport
AM341_RS22280	COG0789	Transcriptional regulator
AM341_RS22285	COG3275	phosphorelay sensor kinase activity
AM341_RS22290	COG3279	Response regulator of the LytR AlgR family
AM341_RS22295	COG4807	Protein conserved in bacteria
AM341_RS22300	COG4808	Protein conserved in bacteria
AM341_RS22305	COG4715	Zinc finger, swim domain protein
AM341_RS22310	COG3552	Protein containing von Willebrand factor type A (VWA) domain
AM341_RS22315	COG2425	protein containing a von Willebrand factor type A (vWA) domain
AM341_RS22320	COG0714	Associated with various cellular activities
AM341_RS22330	COG3831	ATPase activity
AM341_RS22345	COG0489	protein tyrosine kinase activity
AM341_RS22360	COG3539	Fimbrial protein
AM341_RS22365	COG3121	Chaperone
AM341_RS22370	COG3188	usher protein
AM341_RS22375	COG3539	Fimbrial protein
AM341_RS22380	COG5455	response to cobalt ion
AM341_RS22400	COG0351	phosphomethylpyrimidine kinase
AM341_RS22405	COG3757	hydrolase, family 25
AM341_RS22410	COG2188	Transcriptional regulator
AM341_RS22415	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM341_RS22420	COG1397	ADP-ribosylglycohydrolase
AM341_RS22425	COG2211	Major facilitator Superfamily
AM341_RS22430	COG1830	Aldolase
AM341_RS22440	COG1069	ribulokinase activity
AM341_RS22465	COG1070	Carbohydrate kinase
AM341_RS22475	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM341_RS22495	COG0826	peptidase U32
AM341_RS22505	COG0745	RESPONSE REGULATOR receiver
AM341_RS22510	COG2205	protein histidine kinase activity
AM341_RS22540	COG4245	von Willebrand factor, type A
AM341_RS22545	COG0631	protein serine/threonine phosphatase activity
AM341_RS22550	COG3779	Protein conserved in bacteria
AM341_RS22555	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
AM341_RS22560	COG0443	Heat shock 70 kDa protein
AM341_RS22565	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AM341_RS22570	COG3447	MASE1 domain protein
AM341_RS22570	COG5001	Diguanylate cyclase
AM341_RS22570	COG5002	protein histidine kinase activity
AM341_RS22575	COG0572	uridine kinase
AM341_RS22585	COG2982	Protein involved in outer membrane biogenesis
AM341_RS22600	COG1253	flavin adenine dinucleotide binding
AM341_RS22700	COG1088	dTDP-glucose 4,6-dehydratase activity
AM341_RS22765	COG0438	transferase activity, transferring glycosyl groups
AM341_RS22775	COG0140	phosphoribosyl-ATP diphosphatase activity
AM341_RS22775	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AM341_RS22790	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AM341_RS22795	COG0131	Imidazoleglycerol-phosphate dehydratase
AM341_RS22795	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AM341_RS22805	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AM341_RS22825	COG2161	toxin-antitoxin pair type II binding
AM341_RS22830	COG4115	mRNA cleavage
AM341_RS22835	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM341_RS22840	COG0583	DNA-binding transcription factor activity
AM341_RS22850	COG0531	amino acid
AM341_RS22855	COG2391	methyltransferase activity
AM341_RS22860	COG0425	Belongs to the sulfur carrier protein TusA family
AM341_RS22865	COG2925	Exonuclease
AM341_RS22870	COG1686	Belongs to the peptidase S11 family
AM341_RS22885	COG1289	transmembrane transporter activity
AM341_RS22925	COG2003	Belongs to the UPF0758 family
AM341_RS22965	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
AM341_RS22980	COG1376	ErfK ybiS ycfS ynhG family protein
AM341_RS23060	COG2003	Belongs to the UPF0758 family
AM341_RS23115	COG3504	Conjugal transfer protein
AM341_RS23190	COG4771	TonB-dependent receptor
AM341_RS23195	COG1021	2,3-dihydroxybenzoate-AMP ligase
AM341_RS23215	COG3433	isochorismatase activity
AM341_RS23215	COG2226	methyltransferase
AM341_RS23215	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AM341_RS23230	COG1132	(ABC) transporter
AM341_RS23235	COG2814	Major facilitator Superfamily
AM341_RS23240	COG1169	isochorismate synthase
AM341_RS23245	COG0582	viral genome integration into host DNA
AM341_RS23255	COG0583	DNA-binding transcription factor activity
AM341_RS23260	COG0583	DNA-binding transcription factor activity
AM341_RS23270	COG0534	Mate efflux family protein
AM341_RS23285	COG0217	transcriptional regulatory protein
AM341_RS23290	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AM341_RS23295	COG0477	Major facilitator Superfamily
AM341_RS23305	COG1470	cell adhesion involved in biofilm formation
AM341_RS23305	COG1388	LysM domain
AM341_RS23330	COG3038	cytochrome b561
AM341_RS23335	COG3443	Belongs to the bacterial solute-binding protein 9 family
AM341_RS23350	COG2351	hydroxyisourate hydrolase activity
AM341_RS23355	COG0745	RESPONSE REGULATOR receiver
AM341_RS23360	COG2205	protein histidine kinase activity
AM341_RS23375	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM341_RS23385	COG1418	mRNA catabolic process
AM341_RS23390	COG0270	DNA (cytosine-5-)-methyltransferase activity
AM341_RS23395	COG3727	T/G mismatch-specific endonuclease activity
AM341_RS23400	COG0697	spore germination
AM341_RS23405	COG2354	Protein conserved in bacteria
AM341_RS23410	COG5475	Uncharacterized small protein (DUF2158)
AM341_RS23440	COG2197	response regulator
AM341_RS23445	COG1684	flagellar biosynthetic protein fliR
AM341_RS23450	COG1987	bacterial-type flagellum assembly
AM341_RS23455	COG1338	Plays a role in the flagellum-specific transport system
AM341_RS23460	COG3190	flagellar
AM341_RS23465	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AM341_RS23470	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AM341_RS23475	COG1580	Controls the rotational direction of flagella during chemotaxis
AM341_RS23480	COG3144	bacterial-type flagellum assembly
AM341_RS23485	COG2882	bacterial-type flagellum organization
AM341_RS23490	COG1157	protein secretion by the type III secretion system
AM341_RS23495	COG1317	bacterial-type flagellum organization
AM341_RS23500	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AM341_RS23505	COG1766	The M ring may be actively involved in energy transduction
AM341_RS23530	COG2135	peptidase activity
AM341_RS23535	COG0425	Belongs to the sulfur carrier protein TusA family
AM341_RS23540	COG2391	methyltransferase activity
AM341_RS23555	COG0366	Alpha amylase catalytic
AM341_RS23565	COG1516	flagellar protein fliS
AM341_RS23570	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
AM341_RS23585	COG1191	sigma factor activity
AM341_RS23595	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM341_RS23605	COG0765	amino acid transport
AM341_RS23610	COG1126	abc transporter atp-binding protein
AM341_RS23615	COG2197	response regulator
AM341_RS23630	COG2197	response regulator
AM341_RS23660	COG3318	Belongs to the UPF0149 family
AM341_RS23660	COG3012	SEC-C Motif Domain Protein
AM341_RS23665	COG0814	amino acid
AM341_RS23675	COG1528	Iron-storage protein
AM341_RS23695	COG1528	Iron-storage protein
AM341_RS23705	COG1879	ABC-type sugar transport system periplasmic component
AM341_RS23710	COG1129	ABC transporter
AM341_RS23715	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM341_RS23720	COG1877	trehalose-phosphatase activity
AM341_RS23730	COG0589	response to stress
AM341_RS23745	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AM341_RS23750	COG1360	Flagellar Motor Protein
AM341_RS23755	COG0643	Histidine kinase
AM341_RS23755	COG2198	Histidine kinase
AM341_RS23760	COG0835	chemotaxis
AM341_RS23765	COG0840	transmembrane signaling receptor activity
AM341_RS23770	COG0840	transmembrane signaling receptor activity
AM341_RS23775	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AM341_RS23780	COG2201	protein-glutamate methylesterase activity
AM341_RS23785	COG0745	RESPONSE REGULATOR receiver
AM341_RS23790	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
AM341_RS23795	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AM341_RS23800	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AM341_RS23810	COG3755	Protein conserved in bacteria
AM341_RS23825	COG3102	Protein conserved in bacteria
AM341_RS23835	COG3005	denitrification pathway
AM341_RS23840	COG0243	molybdopterin cofactor binding
AM341_RS23855	COG3788	relative of glutathione S-transferase, MAPEG superfamily
AM341_RS23860	COG1801	Protein of unknown function DUF72
AM341_RS23865	COG1335	isochorismatase
AM341_RS23875	COG0494	nUDIX hydrolase
AM341_RS23880	COG0217	transcriptional regulatory protein
AM341_RS23910	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM341_RS23920	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AM341_RS23925	COG0739	heme binding
AM341_RS23930	COG1560	Kdo2-lipid A biosynthetic process
AM341_RS23935	COG0469	pyruvate kinase activity
AM341_RS23940	COG1737	Transcriptional regulator
AM341_RS23945	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AM341_RS23950	COG0129	dihydroxy-acid dehydratase activity
AM341_RS23955	COG0800	Aldolase
AM341_RS23965	COG3141	response to X-ray
AM341_RS23975	COG2979	Protein of unknown function (DUF533)
AM341_RS23980	COG1770	oligopeptidase
AM341_RS23985	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM341_RS23990	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM341_RS24000	COG2372	response to copper ion
AM341_RS24005	COG1276	copper resistance
AM341_RS24015	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AM341_RS24035	COG3008	intermembrane lipid transfer
AM341_RS24040	COG2995	paraquat-inducible protein a
AM341_RS24045	COG1956	GAF domain-containing protein
AM341_RS24055	COG0793	Belongs to the peptidase S41A family
AM341_RS24065	COG2814	Major facilitator Superfamily
AM341_RS24070	COG1414	Transcriptional regulator
AM341_RS24105	COG2226	methyltransferase
AM341_RS24125	COG3716	PTS system mannose fructose sorbose family IID component
AM341_RS24130	COG3715	PTS system
AM341_RS24135	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM341_RS24135	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM341_RS24150	COG1253	flavin adenine dinucleotide binding
AM341_RS24155	COG2200	EAL domain
AM341_RS24160	COG1760	l-serine dehydratase
AM341_RS24170	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AM341_RS24185	COG0251	oxidation-reduction process
AM341_RS24190	COG1199	ATP-dependent helicase activity
AM341_RS24195	COG1214	PFAM Peptidase M22, glycoprotease
AM341_RS24200	COG3065	identical protein binding
AM341_RS24205	COG0318	PFAM AMP-dependent synthetase and ligase
AM341_RS24210	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AM341_RS24215	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM341_RS24220	COG4638	Rieske (2fe-2S)
AM341_RS24225	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM341_RS24230	COG0473	3-isopropylmalate dehydrogenase activity
AM341_RS24235	COG0583	DNA-binding transcription factor activity
AM341_RS24245	COG3615	Tellurite resistance protein tehB
AM341_RS24255	COG2261	transglycosylase associated protein
AM341_RS24270	COG2203	Gaf domain
AM341_RS24270	COG2199	diguanylate cyclase activity
AM341_RS24275	COG3042	response to heat
AM341_RS24280	COG3189	MarR family transcriptional regulator
AM341_RS24285	COG2807	transmembrane transport
AM341_RS24290	COG2207	Transcriptional regulator
AM341_RS24305	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM341_RS24310	COG2199	diguanylate cyclase activity
AM341_RS24315	COG2199	diguanylate cyclase activity
AM341_RS24325	COG2766	serine protein kinase
AM341_RS24330	COG3713	MltA-interacting MipA family protein
AM341_RS24335	COG0656	L-ascorbic acid biosynthetic process
AM341_RS24340	COG0676	glucose-6-phosphate 1-epimerase activity
AM341_RS24345	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AM341_RS24355	COG3139	Protein of unknown function (DUF1315)
AM341_RS24360	COG1063	alcohol dehydrogenase
AM341_RS24365	COG2271	Major facilitator Superfamily
AM341_RS24370	COG1063	alcohol dehydrogenase
AM341_RS24375	COG0191	fructose-bisphosphate aldolase activity
AM341_RS24380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM341_RS24385	COG0667	Aldo Keto reductase
AM341_RS24390	COG1349	DNA-binding transcription factor activity
AM341_RS24395	COG2814	Major facilitator Superfamily
AM341_RS24400	COG1335	isochorismatase
AM341_RS24405	COG0252	asparaginase activity
AM341_RS24410	COG0616	signal peptide processing
AM341_RS24420	COG0778	Nitroreductase
AM341_RS24435	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM341_RS24445	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AM341_RS24455	COG0494	nUDIX hydrolase
AM341_RS24460	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AM341_RS24465	COG2897	thiosulfate sulfurtransferase activity
AM341_RS24470	COG4136	ATPase activity
AM341_RS24475	COG4135	transport system, permease component
AM341_RS24480	COG4134	Bacterial extracellular solute-binding protein
AM341_RS24485	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM341_RS24490	COG0398	Pfam SNARE associated Golgi protein
AM341_RS24500	COG0398	Pfam SNARE associated Golgi protein
AM341_RS24505	COG0708	Exodeoxyribonuclease III
AM341_RS24540	COG3678	ATP-independent chaperone mediated protein folding
AM341_RS24550	COG0322	excinuclease ABC activity
AM341_RS24560	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM341_RS24570	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM341_RS24575	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM341_RS24580	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM341_RS24585	COG2169	Transcriptional regulator
AM341_RS24585	COG1917	Cupin 2, conserved barrel domain protein
AM341_RS24590	COG1486	melibiose metabolic process
AM341_RS24600	COG0753	catalase activity
AM341_RS24615	COG1823	symporter activity
AM341_RS24620	COG1988	membrane-bound metal-dependent
AM341_RS24625	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM341_RS24635	COG3001	Fructosamine kinase
AM341_RS24645	COG1105	Belongs to the carbohydrate kinase PfkB family
AM341_RS24650	COG3137	Salt-induced outer membrane protein
AM341_RS24695	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AM341_RS24695	COG0072	phenylalanine-tRNA ligase activity
AM341_RS24710	COG0386	Belongs to the glutathione peroxidase family
AM341_RS24720	COG0791	NLP P60 protein
AM341_RS24725	COG2200	EAL domain
AM341_RS24815	COG3436	PFAM IS66 Orf2 family protein
AM341_RS24820	COG4372	Transposase
AM341_RS24875	COG2235	arginine
AM341_RS24890	COG1288	antiporter activity
AM341_RS24895	COG1438	arginine binding
AM341_RS24910	COG3436	PFAM IS66 Orf2 family protein
AM341_RS24985	COG4644	lycopene metabolic process
AM341_RS25005	COG0697	spore germination
AM341_RS25050	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM341_RS25060	COG1902	pentaerythritol trinitrate reductase activity
AM341_RS25065	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AM341_RS25070	COG1028	Short-chain dehydrogenase reductase Sdr
AM341_RS25075	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AM341_RS25110	COG3344	reverse transcriptase
AM341_RS25180	COG0577	efflux transmembrane transporter activity
AM341_RS25180	COG1136	(ABC) transporter
AM341_RS25185	COG1136	(ABC) transporter
AM341_RS25185	COG0577	efflux transmembrane transporter activity
AM341_RS25190	COG0577	efflux transmembrane transporter activity
AM341_RS25190	COG1136	(ABC) transporter
AM341_RS25205	COG0672	)-iron permease
AM341_RS25215	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AM341_RS25220	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM341_RS25290	COG1660	Displays ATPase and GTPase activities
AM341_RS25325	COG3436	PFAM IS66 Orf2 family protein
AM341_RS25360	COG4771	TonB-dependent receptor
AM341_RS25440	COG1121	(ABC) transporter
AM341_RS25445	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM341_RS25450	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM341_RS25470	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AM341_RS25865	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM341_RS25930	COG3657	addiction module killer protein
AM341_RS26060	COG3504	Conjugal transfer protein