AM341_RS00015	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AM341_RS00015	PWY-6164	3-dehydroquinate biosynthesis I
AM341_RS00015	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AM341_RS00030	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS00080	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AM341_RS00080	PWY-6416	quinate degradation II
AM341_RS00080	PWY-6707	gallate biosynthesis
AM341_RS00085	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AM341_RS00085	PWY-6454	vancomycin resistance I
AM341_RS00085	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS00120	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AM341_RS00150	PWY-6823	molybdenum cofactor biosynthesis
AM341_RS00150	PWY-6891	thiazole biosynthesis II (Bacillus)
AM341_RS00150	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS00150	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AM341_RS00170	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS00170	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS00170	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS00170	PWY-5723	Rubisco shunt
AM341_RS00170	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS00170	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS00170	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS00170	PWY-7003	glycerol degradation to butanol
AM341_RS00170	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS00170	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS00240	PWY-6167	flavin biosynthesis II (archaea)
AM341_RS00240	PWY-6168	flavin biosynthesis III (fungi)
AM341_RS00240	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS00280	PWY-6854	ethylene biosynthesis III (microbes)
AM341_RS00305	PWY-5386	methylglyoxal degradation I
AM341_RS00330	PWY-6854	ethylene biosynthesis III (microbes)
AM341_RS00370	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AM341_RS00370	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AM341_RS00380	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AM341_RS00380	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AM341_RS00460	PWY-6609	adenine and adenosine salvage III
AM341_RS00460	PWY-6611	adenine and adenosine salvage V
AM341_RS00460	PWY-7179	purine deoxyribonucleosides degradation I
AM341_RS00460	PWY-7179-1	purine deoxyribonucleosides degradation
AM341_RS00465	PWY-6936	seleno-amino acid biosynthesis
AM341_RS00470	PWY-6619	adenine and adenosine salvage VI
AM341_RS00490	PWY-6807	xyloglucan degradation II (exoglucanase)
AM341_RS00510	PWY-3861	mannitol degradation II
AM341_RS00510	PWY-3881	mannitol biosynthesis
AM341_RS00510	PWY-5659	GDP-mannose biosynthesis
AM341_RS00510	PWY-6992	1,5-anhydrofructose degradation
AM341_RS00510	PWY-7456	mannan degradation
AM341_RS00510	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AM341_RS00510	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AM341_RS00515	PWY-5392	reductive TCA cycle II
AM341_RS00515	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS00515	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS00515	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS00515	PWY-6728	methylaspartate cycle
AM341_RS00515	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS00515	PWY-7254	TCA cycle VII (acetate-producers)
AM341_RS00515	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS00520	PWY-5392	reductive TCA cycle II
AM341_RS00520	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS00520	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS00520	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS00520	PWY-6728	methylaspartate cycle
AM341_RS00520	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS00520	PWY-7254	TCA cycle VII (acetate-producers)
AM341_RS00520	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS00630	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AM341_RS00695	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS00695	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS00695	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS00695	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS00695	PWY-5723	Rubisco shunt
AM341_RS00695	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS00695	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS00695	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS00695	PWY-7003	glycerol degradation to butanol
AM341_RS00695	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS00695	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS00710	PWY-6531	mannitol cycle
AM341_RS00840	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AM341_RS00840	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AM341_RS00840	PWY-6936	seleno-amino acid biosynthesis
AM341_RS00840	PWY-702	L-methionine biosynthesis II
AM341_RS00880	PWY-4261	glycerol degradation I
AM341_RS00970	PWY-4321	L-glutamate degradation IV
AM341_RS00995	PWY-6454	vancomycin resistance I
AM341_RS00995	PWY-6455	vancomycin resistance II
AM341_RS01245	PWY-2	putrescine degradation IV
AM341_RS01245	PWY-3	putrescine degradation V
AM341_RS01435	PWY-5667	CDP-diacylglycerol biosynthesis I
AM341_RS01435	PWY-5981	CDP-diacylglycerol biosynthesis III
AM341_RS01435	PWY-7817	AM341_RS01435
AM341_RS01490	PWY-1341	phenylacetate degradation II (anaerobic)
AM341_RS01490	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AM341_RS01490	PWY-7716	AM341_RS01490
AM341_RS01495	PWY-1361	benzoyl-CoA degradation I (aerobic)
AM341_RS01495	PWY-2361	3-oxoadipate degradation
AM341_RS01495	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AM341_RS01505	PWY-1361	benzoyl-CoA degradation I (aerobic)
AM341_RS01505	PWY-5109	2-methylbutanoate biosynthesis
AM341_RS01505	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AM341_RS01505	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AM341_RS01505	PWY-5177	glutaryl-CoA degradation
AM341_RS01505	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AM341_RS01505	PWY-6435	4-hydroxybenzoate biosynthesis V
AM341_RS01505	PWY-6583	pyruvate fermentation to butanol I
AM341_RS01505	PWY-6863	pyruvate fermentation to hexanol
AM341_RS01505	PWY-6883	pyruvate fermentation to butanol II
AM341_RS01505	PWY-6944	androstenedione degradation
AM341_RS01505	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AM341_RS01505	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AM341_RS01505	PWY-7007	methyl ketone biosynthesis
AM341_RS01505	PWY-7046	4-coumarate degradation (anaerobic)
AM341_RS01505	PWY-7094	fatty acid salvage
AM341_RS01505	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AM341_RS01505	PWY-735	jasmonic acid biosynthesis
AM341_RS01505	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AM341_RS01505	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AM341_RS01505	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AM341_RS01505	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AM341_RS01505	PWY-7726	AM341_RS01505
AM341_RS01505	PWY-7778	AM341_RS01505
AM341_RS01505	PWY-7779	AM341_RS01505
AM341_RS01505	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AM341_RS01540	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AM341_RS01730	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS01730	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS01730	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS01730	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS01730	PWY-5723	Rubisco shunt
AM341_RS01730	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS01730	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS01730	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS01730	PWY-7003	glycerol degradation to butanol
AM341_RS01730	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS01730	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS01770	PWY-2721	trehalose degradation III
AM341_RS01770	PWY-2722	trehalose degradation IV
AM341_RS01770	PWY-7459	kojibiose degradation
AM341_RS01810	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AM341_RS01815	PWY-5350	thiosulfate disproportionation III (rhodanese)
AM341_RS01875	PWY-381	nitrate reduction II (assimilatory)
AM341_RS01875	PWY-5675	nitrate reduction V (assimilatory)
AM341_RS01875	PWY-6549	L-glutamine biosynthesis III
AM341_RS01875	PWY-6963	ammonia assimilation cycle I
AM341_RS01875	PWY-6964	ammonia assimilation cycle II
AM341_RS01925	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AM341_RS01925	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AM341_RS01925	PWY-5989	stearate biosynthesis II (bacteria and plants)
AM341_RS01925	PWY-6113	superpathway of mycolate biosynthesis
AM341_RS01925	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AM341_RS01925	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AM341_RS01925	PWY-7663	gondoate biosynthesis (anaerobic)
AM341_RS01925	PWY-7664	oleate biosynthesis IV (anaerobic)
AM341_RS01925	PWY-7858	AM341_RS01925
AM341_RS01925	PWYG-321	mycolate biosynthesis
AM341_RS01970	PWY-5686	UMP biosynthesis
AM341_RS01970	PWY-7790	AM341_RS01970
AM341_RS01970	PWY-7791	AM341_RS01970
AM341_RS01990	PWY-6168	flavin biosynthesis III (fungi)
AM341_RS01990	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AM341_RS02060	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AM341_RS02060	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AM341_RS02060	PWY-6268	adenosylcobalamin salvage from cobalamin
AM341_RS02060	PWY-6269	adenosylcobalamin salvage from cobinamide II
AM341_RS02090	PWY-5958	acridone alkaloid biosynthesis
AM341_RS02090	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AM341_RS02090	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AM341_RS02095	PWY-5958	acridone alkaloid biosynthesis
AM341_RS02095	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AM341_RS02095	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AM341_RS02220	PWY-3162	L-tryptophan degradation V (side chain pathway)
AM341_RS02220	PWY-5057	L-valine degradation II
AM341_RS02220	PWY-5076	L-leucine degradation III
AM341_RS02220	PWY-5078	L-isoleucine degradation II
AM341_RS02220	PWY-5079	L-phenylalanine degradation III
AM341_RS02220	PWY-5082	L-methionine degradation III
AM341_RS02220	PWY-5480	pyruvate fermentation to ethanol I
AM341_RS02220	PWY-5486	pyruvate fermentation to ethanol II
AM341_RS02220	PWY-5751	phenylethanol biosynthesis
AM341_RS02220	PWY-6313	serotonin degradation
AM341_RS02220	PWY-6333	acetaldehyde biosynthesis I
AM341_RS02220	PWY-6342	noradrenaline and adrenaline degradation
AM341_RS02220	PWY-6587	pyruvate fermentation to ethanol III
AM341_RS02220	PWY-6802	salidroside biosynthesis
AM341_RS02220	PWY-6871	3-methylbutanol biosynthesis
AM341_RS02220	PWY-7013	L-1,2-propanediol degradation
AM341_RS02220	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AM341_RS02220	PWY-7118	chitin degradation to ethanol
AM341_RS02220	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AM341_RS02230	PWY-7199	pyrimidine deoxyribonucleosides salvage
AM341_RS02240	PWY-3801	sucrose degradation II (sucrose synthase)
AM341_RS02240	PWY-6527	stachyose degradation
AM341_RS02240	PWY-7238	sucrose biosynthesis II
AM341_RS02240	PWY-7343	UDP-glucose biosynthesis
AM341_RS02240	PWY-7817	AM341_RS02240
AM341_RS02260	PWY-2201	folate transformations I
AM341_RS02260	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS02380	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AM341_RS02380	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AM341_RS02405	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AM341_RS02415	PWY-7560	methylerythritol phosphate pathway II
AM341_RS02445	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AM341_RS02540	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS02725	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS02725	PWY-6549	L-glutamine biosynthesis III
AM341_RS02725	PWY-6728	methylaspartate cycle
AM341_RS02725	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS02725	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS02725	PWY-7254	TCA cycle VII (acetate-producers)
AM341_RS02725	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AM341_RS02750	PWY-6123	inosine-5'-phosphate biosynthesis I
AM341_RS02750	PWY-6124	inosine-5'-phosphate biosynthesis II
AM341_RS02750	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS02750	PWY-7234	inosine-5'-phosphate biosynthesis III
AM341_RS03155	PWY-6517	<i>N</i>-acetylglucosamine degradation II
AM341_RS03155	PWY-6906	chitin derivatives degradation
AM341_RS03220	PWY-6902	chitin degradation II
AM341_RS03220	PWY-7822	AM341_RS03220
AM341_RS03225	PWY-6896	thiamin salvage I
AM341_RS03265	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AM341_RS03265	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS03265	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS03265	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AM341_RS03265	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AM341_RS03265	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AM341_RS03275	PWY-6543	4-aminobenzoate biosynthesis
AM341_RS03290	PWY-5367	petroselinate biosynthesis
AM341_RS03290	PWY-5515	L-arabinose degradation II
AM341_RS03290	PWY-5525	D-glucuronate degradation I
AM341_RS03290	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AM341_RS03290	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AM341_RS03290	PWY-5989	stearate biosynthesis II (bacteria and plants)
AM341_RS03290	PWY-5994	palmitate biosynthesis I (animals and fungi)
AM341_RS03290	PWY-6113	superpathway of mycolate biosynthesis
AM341_RS03290	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AM341_RS03290	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AM341_RS03290	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AM341_RS03290	PWY-7663	gondoate biosynthesis (anaerobic)
AM341_RS03290	PWY-7664	oleate biosynthesis IV (anaerobic)
AM341_RS03290	PWY-7858	AM341_RS03290
AM341_RS03290	PWYG-321	mycolate biosynthesis
AM341_RS03295	PWY-4381	fatty acid biosynthesis initiation I
AM341_RS03295	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AM341_RS03295	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AM341_RS03300	PWY-4381	fatty acid biosynthesis initiation I
AM341_RS03450	PWY-5686	UMP biosynthesis
AM341_RS03450	PWY-7790	AM341_RS03450
AM341_RS03450	PWY-7791	AM341_RS03450
AM341_RS03615	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS03720	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AM341_RS03720	PWY-6853	ethylene biosynthesis II (microbes)
AM341_RS03720	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AM341_RS03755	PWY-7723	AM341_RS03755
AM341_RS03775	PWY-7731	AM341_RS03775
AM341_RS03970	PWY-2201	folate transformations I
AM341_RS04040	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AM341_RS04040	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AM341_RS04040	PWY-5989	stearate biosynthesis II (bacteria and plants)
AM341_RS04040	PWY-5994	palmitate biosynthesis I (animals and fungi)
AM341_RS04040	PWY-6113	superpathway of mycolate biosynthesis
AM341_RS04040	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AM341_RS04040	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AM341_RS04040	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AM341_RS04040	PWY-7663	gondoate biosynthesis (anaerobic)
AM341_RS04040	PWY-7664	oleate biosynthesis IV (anaerobic)
AM341_RS04040	PWY-7858	AM341_RS04040
AM341_RS04040	PWYG-321	mycolate biosynthesis
AM341_RS04070	PWY-6825	phosphatidylcholine biosynthesis V
AM341_RS04085	PWY-5686	UMP biosynthesis
AM341_RS04130	PWY-7723	AM341_RS04130
AM341_RS04160	PWY-5381	pyridine nucleotide cycling (plants)
AM341_RS04180	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS04180	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AM341_RS04180	PWY-6638	sulfolactate degradation III
AM341_RS04180	PWY-6642	(<i>R</i>)-cysteate degradation
AM341_RS04180	PWY-6643	coenzyme M biosynthesis II
AM341_RS04180	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AM341_RS04180	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AM341_RS04180	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS04240	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AM341_RS04280	PWY-7205	CMP phosphorylation
AM341_RS04290	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AM341_RS04315	PWY-5480	pyruvate fermentation to ethanol I
AM341_RS04315	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS04315	PWY-5493	reductive monocarboxylic acid cycle
AM341_RS04365	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AM341_RS04410	PWY-7801	AM341_RS04410
AM341_RS04650	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AM341_RS04650	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AM341_RS04710	PWY-6823	molybdenum cofactor biosynthesis
AM341_RS04715	PWY-6823	molybdenum cofactor biosynthesis
AM341_RS04720	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS04720	PWY-5723	Rubisco shunt
AM341_RS04730	PWY-5480	pyruvate fermentation to ethanol I
AM341_RS04730	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS04730	PWY-5493	reductive monocarboxylic acid cycle
AM341_RS04940	PWY-6823	molybdenum cofactor biosynthesis
AM341_RS04975	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AM341_RS04980	PWY-2201	folate transformations I
AM341_RS04980	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AM341_RS04985	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AM341_RS04985	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AM341_RS04985	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AM341_RS04990	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AM341_RS05010	PWY-1081	homogalacturonan degradation
AM341_RS05010	PWY-7246	pectin degradation II
AM341_RS05010	PWY-7248	pectin degradation III
AM341_RS05080	PWY-3821	galactose degradation III
AM341_RS05080	PWY-6317	galactose degradation I (Leloir pathway)
AM341_RS05080	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AM341_RS05080	PWY-6527	stachyose degradation
AM341_RS05080	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AM341_RS05080	PWY-7344	UDP-D-galactose biosynthesis
AM341_RS05085	PWY-6317	galactose degradation I (Leloir pathway)
AM341_RS05085	PWY-6527	stachyose degradation
AM341_RS05090	PWY-3821	galactose degradation III
AM341_RS05090	PWY-6317	galactose degradation I (Leloir pathway)
AM341_RS05090	PWY-6527	stachyose degradation
AM341_RS05095	PWY-6317	galactose degradation I (Leloir pathway)
AM341_RS05100	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS05100	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS05105	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AM341_RS05105	PWY-6164	3-dehydroquinate biosynthesis I
AM341_RS05105	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AM341_RS05130	PWY-5316	nicotine biosynthesis
AM341_RS05130	PWY-7342	superpathway of nicotine biosynthesis
AM341_RS05215	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AM341_RS05240	PWY-6619	adenine and adenosine salvage VI
AM341_RS05250	PWY-5392	reductive TCA cycle II
AM341_RS05250	PWY-5537	pyruvate fermentation to acetate V
AM341_RS05250	PWY-5538	pyruvate fermentation to acetate VI
AM341_RS05250	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS05250	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS05250	PWY-6728	methylaspartate cycle
AM341_RS05250	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS05250	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS05255	PWY-5392	reductive TCA cycle II
AM341_RS05255	PWY-5537	pyruvate fermentation to acetate V
AM341_RS05255	PWY-5538	pyruvate fermentation to acetate VI
AM341_RS05255	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS05255	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS05255	PWY-6728	methylaspartate cycle
AM341_RS05255	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS05255	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS05260	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AM341_RS05265	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AM341_RS05270	PWY-3781	aerobic respiration I (cytochrome c)
AM341_RS05270	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AM341_RS05270	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS05270	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS05270	PWY-6728	methylaspartate cycle
AM341_RS05270	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS05270	PWY-7254	TCA cycle VII (acetate-producers)
AM341_RS05270	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AM341_RS05275	PWY-3781	aerobic respiration I (cytochrome c)
AM341_RS05275	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AM341_RS05275	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS05275	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS05275	PWY-6728	methylaspartate cycle
AM341_RS05275	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS05275	PWY-7254	TCA cycle VII (acetate-producers)
AM341_RS05275	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AM341_RS05470	PWY-2723	trehalose degradation V
AM341_RS05470	PWY-3801	sucrose degradation II (sucrose synthase)
AM341_RS05470	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AM341_RS05470	PWY-5661	GDP-glucose biosynthesis
AM341_RS05470	PWY-5940	streptomycin biosynthesis
AM341_RS05470	PWY-5941	glycogen degradation II (eukaryotic)
AM341_RS05470	PWY-622	starch biosynthesis
AM341_RS05470	PWY-6317	galactose degradation I (Leloir pathway)
AM341_RS05470	PWY-6731	starch degradation III
AM341_RS05470	PWY-6737	starch degradation V
AM341_RS05470	PWY-6749	CMP-legionaminate biosynthesis I
AM341_RS05470	PWY-7238	sucrose biosynthesis II
AM341_RS05470	PWY-7343	UDP-glucose biosynthesis
AM341_RS05515	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AM341_RS05525	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AM341_RS05525	PWY-6855	chitin degradation I (archaea)
AM341_RS05525	PWY-6906	chitin derivatives degradation
AM341_RS05530	PWY-6906	chitin derivatives degradation
AM341_RS05530	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AM341_RS05530	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AM341_RS05705	PWY-5381	pyridine nucleotide cycling (plants)
AM341_RS05705	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AM341_RS05705	PWY-7761	AM341_RS05705
AM341_RS05710	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AM341_RS05710	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AM341_RS05710	PWY-6269	adenosylcobalamin salvage from cobinamide II
AM341_RS05720	PWY-6825	phosphatidylcholine biosynthesis V
AM341_RS05740	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AM341_RS05740	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AM341_RS05750	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AM341_RS05750	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AM341_RS05770	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AM341_RS05770	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AM341_RS05830	PWY-5392	reductive TCA cycle II
AM341_RS05830	PWY-6038	citrate degradation
AM341_RS05835	PWY-6038	citrate degradation
AM341_RS05845	PWY-5796	malonate decarboxylase activation
AM341_RS05960	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AM341_RS05965	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AM341_RS05975	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AM341_RS05975	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AM341_RS05975	PWY-6406	salicylate biosynthesis I
AM341_RS06035	PWY-6012	acyl carrier protein metabolism I
AM341_RS06035	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AM341_RS06065	PWY-6840	homoglutathione biosynthesis
AM341_RS06065	PWY-7255	ergothioneine biosynthesis I (bacteria)
AM341_RS06145	PWY-3821	galactose degradation III
AM341_RS06145	PWY-6317	galactose degradation I (Leloir pathway)
AM341_RS06145	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AM341_RS06145	PWY-6527	stachyose degradation
AM341_RS06145	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AM341_RS06145	PWY-7344	UDP-D-galactose biosynthesis
AM341_RS06150	PWY-3801	sucrose degradation II (sucrose synthase)
AM341_RS06150	PWY-6527	stachyose degradation
AM341_RS06150	PWY-7238	sucrose biosynthesis II
AM341_RS06150	PWY-7343	UDP-glucose biosynthesis
AM341_RS06150	PWY-7817	AM341_RS06150
AM341_RS06290	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AM341_RS06290	PWY-2201	folate transformations I
AM341_RS06290	PWY-3841	folate transformations II
AM341_RS06290	PWY-5030	L-histidine degradation III
AM341_RS06290	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS06290	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AM341_RS06325	PWY-6123	inosine-5'-phosphate biosynthesis I
AM341_RS06325	PWY-7234	inosine-5'-phosphate biosynthesis III
AM341_RS06350	PWY-5392	reductive TCA cycle II
AM341_RS06350	PWY-5537	pyruvate fermentation to acetate V
AM341_RS06350	PWY-5538	pyruvate fermentation to acetate VI
AM341_RS06350	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS06350	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS06350	PWY-6728	methylaspartate cycle
AM341_RS06350	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS06350	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS06355	PWY-1361	benzoyl-CoA degradation I (aerobic)
AM341_RS06355	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AM341_RS06355	PWY-5177	glutaryl-CoA degradation
AM341_RS06355	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AM341_RS06355	PWY-6435	4-hydroxybenzoate biosynthesis V
AM341_RS06355	PWY-6583	pyruvate fermentation to butanol I
AM341_RS06355	PWY-6863	pyruvate fermentation to hexanol
AM341_RS06355	PWY-6883	pyruvate fermentation to butanol II
AM341_RS06355	PWY-6944	androstenedione degradation
AM341_RS06355	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AM341_RS06355	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AM341_RS06355	PWY-7007	methyl ketone biosynthesis
AM341_RS06355	PWY-7094	fatty acid salvage
AM341_RS06355	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AM341_RS06355	PWY-735	jasmonic acid biosynthesis
AM341_RS06355	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AM341_RS06355	PWY-7778	AM341_RS06355
AM341_RS06355	PWY-7779	AM341_RS06355
AM341_RS06355	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AM341_RS06365	PWY-5692	allantoin degradation to glyoxylate II
AM341_RS06365	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AM341_RS06380	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
AM341_RS06380	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AM341_RS06410	PWY-5694	allantoin degradation to glyoxylate I
AM341_RS06410	PWY-5705	allantoin degradation to glyoxylate III
AM341_RS06575	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS06605	PWY-6605	adenine and adenosine salvage II
AM341_RS06605	PWY-6610	adenine and adenosine salvage IV
AM341_RS06605	PWY-7805	AM341_RS06605
AM341_RS06605	PWY-7807	AM341_RS06605
AM341_RS06740	PWY-6703	preQ<sub>0</sub> biosynthesis
AM341_RS06815	PWY-3781	aerobic respiration I (cytochrome c)
AM341_RS06815	PWY-4521	arsenite oxidation I (respiratory)
AM341_RS06815	PWY-6692	Fe(II) oxidation
AM341_RS06815	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AM341_RS06815	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AM341_RS06845	PWY-6654	phosphopantothenate biosynthesis III
AM341_RS06845	PWY-7862	AM341_RS06845
AM341_RS06870	PWY-6891	thiazole biosynthesis II (Bacillus)
AM341_RS06870	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS06870	PWY-7560	methylerythritol phosphate pathway II
AM341_RS06880	PWY-5269	cardiolipin biosynthesis II
AM341_RS06880	PWY-5668	cardiolipin biosynthesis I
AM341_RS06880	PWY-7817	AM341_RS06880
AM341_RS06885	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AM341_RS06885	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AM341_RS06885	PWY-6896	thiamin salvage I
AM341_RS06885	PWY-6897	thiamin salvage II
AM341_RS06895	PWY-6167	flavin biosynthesis II (archaea)
AM341_RS06895	PWY-6168	flavin biosynthesis III (fungi)
AM341_RS06900	PWY-5525	D-glucuronate degradation I
AM341_RS06945	PWY-6700	queuosine biosynthesis
AM341_RS06950	PWY-6700	queuosine biosynthesis
AM341_RS06955	PWY-6012	acyl carrier protein metabolism I
AM341_RS06960	PWY-842	starch degradation I
AM341_RS07040	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AM341_RS07050	PWY-3341	L-proline biosynthesis III
AM341_RS07050	PWY-4981	L-proline biosynthesis II (from arginine)
AM341_RS07050	PWY-6344	L-ornithine degradation II (Stickland reaction)
AM341_RS07065	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AM341_RS07065	PWY-5491	diethylphosphate degradation
AM341_RS07080	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AM341_RS07080	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AM341_RS07130	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AM341_RS07130	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AM341_RS07195	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AM341_RS07195	PWY-3162	L-tryptophan degradation V (side chain pathway)
AM341_RS07195	PWY-5057	L-valine degradation II
AM341_RS07195	PWY-5076	L-leucine degradation III
AM341_RS07195	PWY-5078	L-isoleucine degradation II
AM341_RS07195	PWY-5079	L-phenylalanine degradation III
AM341_RS07195	PWY-5082	L-methionine degradation III
AM341_RS07195	PWY-5480	pyruvate fermentation to ethanol I
AM341_RS07195	PWY-5486	pyruvate fermentation to ethanol II
AM341_RS07195	PWY-5751	phenylethanol biosynthesis
AM341_RS07195	PWY-6313	serotonin degradation
AM341_RS07195	PWY-6333	acetaldehyde biosynthesis I
AM341_RS07195	PWY-6342	noradrenaline and adrenaline degradation
AM341_RS07195	PWY-6454	vancomycin resistance I
AM341_RS07195	PWY-6587	pyruvate fermentation to ethanol III
AM341_RS07195	PWY-6802	salidroside biosynthesis
AM341_RS07195	PWY-6871	3-methylbutanol biosynthesis
AM341_RS07195	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS07195	PWY-7013	L-1,2-propanediol degradation
AM341_RS07195	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AM341_RS07195	PWY-7118	chitin degradation to ethanol
AM341_RS07195	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AM341_RS07195	PWY-7798	AM341_RS07195
AM341_RS07200	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AM341_RS07215	PWY-5162	2-oxopentenoate degradation
AM341_RS07220	PWY-5162	2-oxopentenoate degradation
AM341_RS07220	PWY-5436	L-threonine degradation IV
AM341_RS07220	PWY-5480	pyruvate fermentation to ethanol I
AM341_RS07220	PWY-6587	pyruvate fermentation to ethanol III
AM341_RS07220	PWY-7085	triethylamine degradation
AM341_RS07220	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AM341_RS07225	PWY-5162	2-oxopentenoate degradation
AM341_RS07225	PWY-5645	4-chloronitrobenzene degradation
AM341_RS07230	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
AM341_RS07235	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
AM341_RS07240	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
AM341_RS07260	PWY-6807	xyloglucan degradation II (exoglucanase)
AM341_RS07280	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AM341_RS07280	PWY-6416	quinate degradation II
AM341_RS07280	PWY-6707	gallate biosynthesis
AM341_RS07285	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AM341_RS07285	PWY-5743	3-hydroxypropanoate cycle
AM341_RS07285	PWY-5744	glyoxylate assimilation
AM341_RS07285	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AM341_RS07285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS07285	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AM341_RS07285	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AM341_RS07305	PWY-3941	&beta;-alanine biosynthesis II
AM341_RS07305	PWY-5104	L-isoleucine biosynthesis IV
AM341_RS07305	PWY-5132	humulone biosynthesis
AM341_RS07305	PWY-5133	cohumulone biosynthesis
AM341_RS07305	PWY-5747	2-methylcitrate cycle II
AM341_RS07305	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AM341_RS07305	PWY-7118	chitin degradation to ethanol
AM341_RS07305	PWY-7857	AM341_RS07305
AM341_RS07320	PWY-5747	2-methylcitrate cycle II
AM341_RS07375	PWY-5392	reductive TCA cycle II
AM341_RS07375	PWY-5537	pyruvate fermentation to acetate V
AM341_RS07375	PWY-5538	pyruvate fermentation to acetate VI
AM341_RS07375	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS07375	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS07375	PWY-6728	methylaspartate cycle
AM341_RS07375	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS07375	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS07435	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AM341_RS07435	PWY-7494	choline degradation IV
AM341_RS07440	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AM341_RS07440	PWY-7494	choline degradation IV
AM341_RS07840	PWY-4261	glycerol degradation I
AM341_RS07880	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS07880	PWY-5723	Rubisco shunt
AM341_RS07945	PWY-3341	L-proline biosynthesis III
AM341_RS07945	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AM341_RS07950	PWY-3341	L-proline biosynthesis III
AM341_RS07950	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AM341_RS08055	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AM341_RS08225	PWY-5386	methylglyoxal degradation I
AM341_RS08365	PWY-6679	jadomycin biosynthesis
AM341_RS08365	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AM341_RS08380	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AM341_RS08380	PWY-622	starch biosynthesis
AM341_RS08390	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AM341_RS08390	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AM341_RS08390	PWY-5989	stearate biosynthesis II (bacteria and plants)
AM341_RS08390	PWY-5994	palmitate biosynthesis I (animals and fungi)
AM341_RS08390	PWY-6113	superpathway of mycolate biosynthesis
AM341_RS08390	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AM341_RS08390	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AM341_RS08390	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AM341_RS08390	PWY-7663	gondoate biosynthesis (anaerobic)
AM341_RS08390	PWY-7664	oleate biosynthesis IV (anaerobic)
AM341_RS08390	PWY-7858	AM341_RS08390
AM341_RS08390	PWYG-321	mycolate biosynthesis
AM341_RS08415	PWY-5667	CDP-diacylglycerol biosynthesis I
AM341_RS08415	PWY-5981	CDP-diacylglycerol biosynthesis III
AM341_RS08415	PWY-7817	AM341_RS08415
AM341_RS08425	PWY-7294	xylose degradation IV
AM341_RS08425	PWY-7295	L-arabinose degradation IV
AM341_RS08425	PWY-7560	methylerythritol phosphate pathway II
AM341_RS08460	PWY-7799	AM341_RS08460
AM341_RS08460	PWY-7800	AM341_RS08460
AM341_RS08505	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AM341_RS08505	PWY-6153	autoinducer AI-2 biosynthesis I
AM341_RS08505	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AM341_RS08530	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AM341_RS08555	PWY-1001	cellulose biosynthesis
AM341_RS08555	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AM341_RS08555	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AM341_RS08555	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AM341_RS08555	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AM341_RS08595	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AM341_RS08595	PWY-6148	tetrahydromethanopterin biosynthesis
AM341_RS08595	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AM341_RS08595	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AM341_RS08595	PWY-7852	AM341_RS08595
AM341_RS08595	PWY-7853	AM341_RS08595
AM341_RS08635	PWY-6654	phosphopantothenate biosynthesis III
AM341_RS08660	PWY-5155	&beta;-alanine biosynthesis III
AM341_RS08685	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AM341_RS08685	PWY-5743	3-hydroxypropanoate cycle
AM341_RS08685	PWY-5744	glyoxylate assimilation
AM341_RS08685	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AM341_RS08685	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS08685	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AM341_RS08685	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AM341_RS08690	PWY-6599	guanine and guanosine salvage II
AM341_RS08690	PWY-6609	adenine and adenosine salvage III
AM341_RS08690	PWY-6610	adenine and adenosine salvage IV
AM341_RS08690	PWY-6620	guanine and guanosine salvage
AM341_RS08715	PWY-6834	spermidine biosynthesis III
AM341_RS08725	PWY-5747	2-methylcitrate cycle II
AM341_RS08740	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AM341_RS08740	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AM341_RS08750	PWY-6891	thiazole biosynthesis II (Bacillus)
AM341_RS08750	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS08750	PWY-7560	methylerythritol phosphate pathway II
AM341_RS08780	PWY-5316	nicotine biosynthesis
AM341_RS08780	PWY-5381	pyridine nucleotide cycling (plants)
AM341_RS08780	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AM341_RS08780	PWY-7342	superpathway of nicotine biosynthesis
AM341_RS08810	PWY-7851	AM341_RS08810
AM341_RS08825	PWY-6502	oxidized GTP and dGTP detoxification
AM341_RS08840	PWY-2201	folate transformations I
AM341_RS08840	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS08860	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AM341_RS08860	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AM341_RS08865	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AM341_RS08865	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AM341_RS08870	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AM341_RS08870	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AM341_RS08870	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AM341_RS08870	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AM341_RS08880	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AM341_RS08880	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AM341_RS08885	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AM341_RS08885	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AM341_RS08885	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AM341_RS08890	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AM341_RS08890	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AM341_RS08910	PWY-2201	folate transformations I
AM341_RS08935	PWY-5101	L-isoleucine biosynthesis II
AM341_RS08935	PWY-5103	L-isoleucine biosynthesis III
AM341_RS08935	PWY-5104	L-isoleucine biosynthesis IV
AM341_RS08935	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AM341_RS08935	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AM341_RS08935	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AM341_RS08935	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AM341_RS08940	PWY-5101	L-isoleucine biosynthesis II
AM341_RS08940	PWY-5103	L-isoleucine biosynthesis III
AM341_RS08940	PWY-5104	L-isoleucine biosynthesis IV
AM341_RS08940	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AM341_RS08940	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AM341_RS08940	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AM341_RS08940	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AM341_RS08955	PWY-6871	3-methylbutanol biosynthesis
AM341_RS08960	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AM341_RS09030	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AM341_RS09075	PWY-7294	xylose degradation IV
AM341_RS09075	PWY-7295	L-arabinose degradation IV
AM341_RS09095	PWY-3841	folate transformations II
AM341_RS09095	PWY-6614	tetrahydrofolate biosynthesis
AM341_RS09105	PWY-7731	AM341_RS09105
AM341_RS09175	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS09175	PWY-5686	UMP biosynthesis
AM341_RS09175	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AM341_RS09175	PWY-7790	AM341_RS09175
AM341_RS09175	PWY-7791	AM341_RS09175
AM341_RS09180	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS09180	PWY-5686	UMP biosynthesis
AM341_RS09180	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AM341_RS09180	PWY-7790	AM341_RS09180
AM341_RS09180	PWY-7791	AM341_RS09180
AM341_RS09190	PWY-2941	L-lysine biosynthesis II
AM341_RS09190	PWY-2942	L-lysine biosynthesis III
AM341_RS09190	PWY-5097	L-lysine biosynthesis VI
AM341_RS09200	PWY-7560	methylerythritol phosphate pathway II
AM341_RS09220	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AM341_RS09220	PWY-6167	flavin biosynthesis II (archaea)
AM341_RS09220	PWY-6168	flavin biosynthesis III (fungi)
AM341_RS09220	PWY-7863	AM341_RS09220
AM341_RS09310	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS09310	PWY-5723	Rubisco shunt
AM341_RS09335	PWY-702	L-methionine biosynthesis II
AM341_RS09340	PWY-2941	L-lysine biosynthesis II
AM341_RS09340	PWY-2942	L-lysine biosynthesis III
AM341_RS09340	PWY-5097	L-lysine biosynthesis VI
AM341_RS09340	PWY-6559	spermidine biosynthesis II
AM341_RS09340	PWY-6562	norspermidine biosynthesis
AM341_RS09340	PWY-7153	grixazone biosynthesis
AM341_RS09350	PWY-6004	glycine betaine biosynthesis V (from glycine)
AM341_RS09445	PWY-4202	arsenate detoxification I (glutaredoxin)
AM341_RS09445	PWY-5532	adenosine nucleotides degradation IV
AM341_RS09445	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AM341_RS09445	PWY-6608	guanosine nucleotides degradation III
AM341_RS09445	PWY-6609	adenine and adenosine salvage III
AM341_RS09445	PWY-6611	adenine and adenosine salvage V
AM341_RS09445	PWY-6620	guanine and guanosine salvage
AM341_RS09445	PWY-6627	salinosporamide A biosynthesis
AM341_RS09445	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AM341_RS09445	PWY-7179	purine deoxyribonucleosides degradation I
AM341_RS09445	PWY-7179-1	purine deoxyribonucleosides degradation
AM341_RS09450	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AM341_RS09455	PWY-7181	pyrimidine deoxyribonucleosides degradation
AM341_RS09460	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AM341_RS09515	PWY-6825	phosphatidylcholine biosynthesis V
AM341_RS09725	PWY-6531	mannitol cycle
AM341_RS09730	PWY-7242	D-fructuronate degradation
AM341_RS10115	PWY-4981	L-proline biosynthesis II (from arginine)
AM341_RS10115	PWY-4984	urea cycle
AM341_RS10115	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AM341_RS10155	PWY-5686	UMP biosynthesis
AM341_RS10155	PWY-7790	AM341_RS10155
AM341_RS10155	PWY-7791	AM341_RS10155
AM341_RS10185	PWY-6619	adenine and adenosine salvage VI
AM341_RS10225	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS10250	PWY-7805	AM341_RS10250
AM341_RS10250	PWY-7807	AM341_RS10250
AM341_RS10420	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AM341_RS10425	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AM341_RS10430	PWY-5686	UMP biosynthesis
AM341_RS10430	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AM341_RS10430	PWY-7790	AM341_RS10430
AM341_RS10430	PWY-7791	AM341_RS10430
AM341_RS10525	PWY-2941	L-lysine biosynthesis II
AM341_RS10525	PWY-2942	L-lysine biosynthesis III
AM341_RS10525	PWY-5097	L-lysine biosynthesis VI
AM341_RS10555	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS10585	PWY-2781	<i>cis</i>-zeatin biosynthesis
AM341_RS10605	PWY-6938	NADH repair
AM341_RS10610	PWY-6700	queuosine biosynthesis
AM341_RS10645	PWY-5669	phosphatidylethanolamine biosynthesis I
AM341_RS10675	PWY-5392	reductive TCA cycle II
AM341_RS10675	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS10675	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS10680	PWY-3781	aerobic respiration I (cytochrome c)
AM341_RS10680	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AM341_RS10680	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS10680	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS10680	PWY-6728	methylaspartate cycle
AM341_RS10680	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS10680	PWY-7254	TCA cycle VII (acetate-producers)
AM341_RS10680	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AM341_RS10760	PWY-5392	reductive TCA cycle II
AM341_RS10760	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS10760	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS10760	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS10760	PWY-6728	methylaspartate cycle
AM341_RS10760	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS10760	PWY-7254	TCA cycle VII (acetate-producers)
AM341_RS10760	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS10865	PWY-5392	reductive TCA cycle II
AM341_RS10865	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS10865	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS10865	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS10865	PWY-6728	methylaspartate cycle
AM341_RS10865	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS10865	PWY-7254	TCA cycle VII (acetate-producers)
AM341_RS10865	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS10975	PWY-7399	methylphosphonate degradation II
AM341_RS10975	PWY-7805	AM341_RS10975
AM341_RS10975	PWY-7807	AM341_RS10975
AM341_RS10990	PWY-7399	methylphosphonate degradation II
AM341_RS10990	PWY-7805	AM341_RS10990
AM341_RS10990	PWY-7807	AM341_RS10990
AM341_RS11000	PWY-7399	methylphosphonate degradation II
AM341_RS11000	PWY-7805	AM341_RS11000
AM341_RS11000	PWY-7807	AM341_RS11000
AM341_RS11005	PWY-7399	methylphosphonate degradation II
AM341_RS11005	PWY-7805	AM341_RS11005
AM341_RS11005	PWY-7807	AM341_RS11005
AM341_RS11010	PWY-7805	AM341_RS11010
AM341_RS11010	PWY-7807	AM341_RS11010
AM341_RS11020	PWY-7805	AM341_RS11020
AM341_RS11020	PWY-7807	AM341_RS11020
AM341_RS11060	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS11060	PWY-5723	Rubisco shunt
AM341_RS11145	PWY-5674	nitrate reduction IV (dissimilatory)
AM341_RS11155	PWY-5132	humulone biosynthesis
AM341_RS11155	PWY-5133	cohumulone biosynthesis
AM341_RS11155	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AM341_RS11155	PWY-7118	chitin degradation to ethanol
AM341_RS11155	PWY-7857	AM341_RS11155
AM341_RS11280	PWY-6348	phosphate acquisition
AM341_RS11290	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS11290	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AM341_RS11290	PWY-6638	sulfolactate degradation III
AM341_RS11290	PWY-6642	(<i>R</i>)-cysteate degradation
AM341_RS11290	PWY-6643	coenzyme M biosynthesis II
AM341_RS11290	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AM341_RS11290	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AM341_RS11290	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS11295	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS11635	PWY-7039	phosphatidate metabolism, as a signaling molecule
AM341_RS11635	PWY-7817	AM341_RS11635
AM341_RS11640	PWY-5667	CDP-diacylglycerol biosynthesis I
AM341_RS11640	PWY-6453	stigma estolide biosynthesis
AM341_RS11640	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AM341_RS11640	PWY-7587	oleate biosynthesis III (cyanobacteria)
AM341_RS11650	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AM341_RS11650	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AM341_RS11650	PWY-6148	tetrahydromethanopterin biosynthesis
AM341_RS11650	PWY-7742	AM341_RS11650
AM341_RS11650	PWY-7745	AM341_RS11650
AM341_RS11740	PWY-3801	sucrose degradation II (sucrose synthase)
AM341_RS11740	PWY-5054	sorbitol biosynthesis I
AM341_RS11740	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AM341_RS11740	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AM341_RS11740	PWY-5659	GDP-mannose biosynthesis
AM341_RS11740	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS11740	PWY-621	sucrose degradation III (sucrose invertase)
AM341_RS11740	PWY-622	starch biosynthesis
AM341_RS11740	PWY-6981	chitin biosynthesis
AM341_RS11740	PWY-6992	1,5-anhydrofructose degradation
AM341_RS11740	PWY-7238	sucrose biosynthesis II
AM341_RS11740	PWY-7347	sucrose biosynthesis III
AM341_RS11740	PWY-7385	1,3-propanediol biosynthesis (engineered)
AM341_RS11750	PWY-2941	L-lysine biosynthesis II
AM341_RS11750	PWY-2942	L-lysine biosynthesis III
AM341_RS11750	PWY-5097	L-lysine biosynthesis VI
AM341_RS11750	PWY-6559	spermidine biosynthesis II
AM341_RS11750	PWY-6562	norspermidine biosynthesis
AM341_RS11750	PWY-7153	grixazone biosynthesis
AM341_RS11775	PWY-2201	folate transformations I
AM341_RS11775	PWY-3841	folate transformations II
AM341_RS11795	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS11800	PWY-6728	methylaspartate cycle
AM341_RS11800	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS11800	PWY-7118	chitin degradation to ethanol
AM341_RS11800	PWY-7294	xylose degradation IV
AM341_RS11800	PWY-7295	L-arabinose degradation IV
AM341_RS11800	PWY-7854	AM341_RS11800
AM341_RS11845	PWY-6123	inosine-5'-phosphate biosynthesis I
AM341_RS11845	PWY-6124	inosine-5'-phosphate biosynthesis II
AM341_RS11845	PWY-7234	inosine-5'-phosphate biosynthesis III
AM341_RS11850	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AM341_RS11850	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AM341_RS11850	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AM341_RS11895	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AM341_RS11895	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AM341_RS11895	PWY-7766	AM341_RS11895
AM341_RS11900	PWY-5381	pyridine nucleotide cycling (plants)
AM341_RS11900	PWY-7761	AM341_RS11900
AM341_RS11910	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AM341_RS11915	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AM341_RS11915	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AM341_RS11915	PWY-6897	thiamin salvage II
AM341_RS11915	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AM341_RS11915	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AM341_RS11915	PWY-7356	thiamin salvage IV (yeast)
AM341_RS11915	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AM341_RS11920	PWY-6891	thiazole biosynthesis II (Bacillus)
AM341_RS11920	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS11930	PWY-6891	thiazole biosynthesis II (Bacillus)
AM341_RS11930	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS11935	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS11935	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AM341_RS12025	PWY-3961	phosphopantothenate biosynthesis II
AM341_RS12035	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AM341_RS12035	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AM341_RS12060	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AM341_RS12060	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AM341_RS12090	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AM341_RS12100	PWY-4983	L-citrulline-nitric oxide cycle
AM341_RS12100	PWY-4984	urea cycle
AM341_RS12100	PWY-5	canavanine biosynthesis
AM341_RS12100	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS12100	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AM341_RS12105	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS12105	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AM341_RS12110	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS12110	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AM341_RS12115	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS12125	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS12125	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AM341_RS12125	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS12125	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS12125	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AM341_RS12125	PWY-6549	L-glutamine biosynthesis III
AM341_RS12125	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AM341_RS12125	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AM341_RS12125	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS12140	PWY-6619	adenine and adenosine salvage VI
AM341_RS12150	PWY-5480	pyruvate fermentation to ethanol I
AM341_RS12150	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS12150	PWY-5493	reductive monocarboxylic acid cycle
AM341_RS12155	PWY-6619	adenine and adenosine salvage VI
AM341_RS12170	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS12170	PWY-5723	Rubisco shunt
AM341_RS12190	PWY-5506	methanol oxidation to formaldehyde IV
AM341_RS12195	PWY-2201	folate transformations I
AM341_RS12195	PWY-3841	folate transformations II
AM341_RS12200	PWY-2941	L-lysine biosynthesis II
AM341_RS12200	PWY-2942	L-lysine biosynthesis III
AM341_RS12200	PWY-5097	L-lysine biosynthesis VI
AM341_RS12200	PWY-6559	spermidine biosynthesis II
AM341_RS12200	PWY-6562	norspermidine biosynthesis
AM341_RS12200	PWY-7153	grixazone biosynthesis
AM341_RS12205	PWY-801	L-homocysteine and L-cysteine interconversion
AM341_RS12250	PWY-5839	menaquinol-7 biosynthesis
AM341_RS12250	PWY-5851	demethylmenaquinol-9 biosynthesis
AM341_RS12250	PWY-5852	demethylmenaquinol-8 biosynthesis I
AM341_RS12250	PWY-5853	demethylmenaquinol-6 biosynthesis I
AM341_RS12250	PWY-5890	menaquinol-10 biosynthesis
AM341_RS12250	PWY-5891	menaquinol-11 biosynthesis
AM341_RS12250	PWY-5892	menaquinol-12 biosynthesis
AM341_RS12250	PWY-5895	menaquinol-13 biosynthesis
AM341_RS12270	PWY-4261	glycerol degradation I
AM341_RS12275	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS12305	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS12305	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS12305	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS12305	PWY-7003	glycerol degradation to butanol
AM341_RS12320	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS12320	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS12320	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS12320	PWY-7385	1,3-propanediol biosynthesis (engineered)
AM341_RS12360	PWY-6854	ethylene biosynthesis III (microbes)
AM341_RS12405	PWY-6619	adenine and adenosine salvage VI
AM341_RS12495	PWY-7446	sulfoglycolysis
AM341_RS12500	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS12500	PWY-5392	reductive TCA cycle II
AM341_RS12500	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS12500	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS12500	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS12500	PWY-6728	methylaspartate cycle
AM341_RS12500	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS12500	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AM341_RS12500	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS12500	PWY-7446	sulfoglycolysis
AM341_RS12505	PWY-7446	sulfoglycolysis
AM341_RS12510	PWY-7446	sulfoglycolysis
AM341_RS12565	PWY-381	nitrate reduction II (assimilatory)
AM341_RS12565	PWY-5675	nitrate reduction V (assimilatory)
AM341_RS12565	PWY-6549	L-glutamine biosynthesis III
AM341_RS12565	PWY-6963	ammonia assimilation cycle I
AM341_RS12565	PWY-6964	ammonia assimilation cycle II
AM341_RS12640	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AM341_RS12640	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AM341_RS12695	PWY-1361	benzoyl-CoA degradation I (aerobic)
AM341_RS12695	PWY-5109	2-methylbutanoate biosynthesis
AM341_RS12695	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AM341_RS12695	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AM341_RS12695	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AM341_RS12695	PWY-5177	glutaryl-CoA degradation
AM341_RS12695	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AM341_RS12695	PWY-6435	4-hydroxybenzoate biosynthesis V
AM341_RS12695	PWY-6583	pyruvate fermentation to butanol I
AM341_RS12695	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AM341_RS12695	PWY-6863	pyruvate fermentation to hexanol
AM341_RS12695	PWY-6883	pyruvate fermentation to butanol II
AM341_RS12695	PWY-6944	androstenedione degradation
AM341_RS12695	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AM341_RS12695	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AM341_RS12695	PWY-7007	methyl ketone biosynthesis
AM341_RS12695	PWY-7046	4-coumarate degradation (anaerobic)
AM341_RS12695	PWY-7094	fatty acid salvage
AM341_RS12695	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AM341_RS12695	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AM341_RS12695	PWY-735	jasmonic acid biosynthesis
AM341_RS12695	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AM341_RS12695	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AM341_RS12695	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AM341_RS12695	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AM341_RS12695	PWY-7726	AM341_RS12695
AM341_RS12695	PWY-7778	AM341_RS12695
AM341_RS12695	PWY-7779	AM341_RS12695
AM341_RS12695	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AM341_RS12700	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AM341_RS12700	PWY-6435	4-hydroxybenzoate biosynthesis V
AM341_RS12700	PWY-6863	pyruvate fermentation to hexanol
AM341_RS12700	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AM341_RS12700	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AM341_RS12700	PWY-6948	sitosterol degradation to androstenedione
AM341_RS12700	PWY-7094	fatty acid salvage
AM341_RS12700	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AM341_RS12700	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AM341_RS12700	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AM341_RS12700	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AM341_RS12700	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AM341_RS12700	PWY-735	jasmonic acid biosynthesis
AM341_RS12700	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AM341_RS12700	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AM341_RS12700	PWY-7726	AM341_RS12700
AM341_RS12710	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AM341_RS12710	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AM341_RS12710	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AM341_RS12710	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AM341_RS12710	PWY-6978	plastoquinol-9 biosynthesis II
AM341_RS12750	PWY-5839	menaquinol-7 biosynthesis
AM341_RS12750	PWY-5844	menaquinol-9 biosynthesis
AM341_RS12750	PWY-5849	menaquinol-6 biosynthesis
AM341_RS12750	PWY-5890	menaquinol-10 biosynthesis
AM341_RS12750	PWY-5891	menaquinol-11 biosynthesis
AM341_RS12750	PWY-5892	menaquinol-12 biosynthesis
AM341_RS12750	PWY-5895	menaquinol-13 biosynthesis
AM341_RS12760	PWY-4202	arsenate detoxification I (glutaredoxin)
AM341_RS12760	PWY-5532	adenosine nucleotides degradation IV
AM341_RS12760	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AM341_RS12760	PWY-6608	guanosine nucleotides degradation III
AM341_RS12760	PWY-6609	adenine and adenosine salvage III
AM341_RS12760	PWY-6611	adenine and adenosine salvage V
AM341_RS12760	PWY-6620	guanine and guanosine salvage
AM341_RS12760	PWY-6627	salinosporamide A biosynthesis
AM341_RS12760	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AM341_RS12760	PWY-7179	purine deoxyribonucleosides degradation I
AM341_RS12760	PWY-7179-1	purine deoxyribonucleosides degradation
AM341_RS12770	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AM341_RS12770	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AM341_RS12770	PWY-6936	seleno-amino acid biosynthesis
AM341_RS12770	PWY-702	L-methionine biosynthesis II
AM341_RS12810	PWY-6803	phosphatidylcholine acyl editing
AM341_RS12810	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AM341_RS12810	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AM341_RS12810	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AM341_RS12810	PWY-7783	AM341_RS12810
AM341_RS12865	PWY-2941	L-lysine biosynthesis II
AM341_RS12865	PWY-5097	L-lysine biosynthesis VI
AM341_RS12890	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AM341_RS12890	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AM341_RS12895	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AM341_RS12895	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AM341_RS12945	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AM341_RS12945	PWY-622	starch biosynthesis
AM341_RS12965	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AM341_RS12970	PWY-6111	mitochondrial L-carnitine shuttle
AM341_RS12970	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AM341_RS12975	PWY-3221	dTDP-L-rhamnose biosynthesis II
AM341_RS12975	PWY-6808	dTDP-D-forosamine biosynthesis
AM341_RS12975	PWY-6942	dTDP-D-desosamine biosynthesis
AM341_RS12975	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AM341_RS12975	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AM341_RS12975	PWY-6974	dTDP-L-olivose biosynthesis
AM341_RS12975	PWY-6976	dTDP-L-mycarose biosynthesis
AM341_RS12975	PWY-7104	dTDP-L-megosamine biosynthesis
AM341_RS12975	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AM341_RS12975	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AM341_RS12975	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AM341_RS12975	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AM341_RS12975	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AM341_RS12975	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AM341_RS12975	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AM341_RS12975	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AM341_RS12975	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AM341_RS12975	PWY-7688	AM341_RS12975
AM341_RS12975	PWY-7814	AM341_RS12975
AM341_RS12980	PWY-3221	dTDP-L-rhamnose biosynthesis II
AM341_RS12980	PWY-6808	dTDP-D-forosamine biosynthesis
AM341_RS12980	PWY-6942	dTDP-D-desosamine biosynthesis
AM341_RS12980	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AM341_RS12980	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AM341_RS12980	PWY-6974	dTDP-L-olivose biosynthesis
AM341_RS12980	PWY-6976	dTDP-L-mycarose biosynthesis
AM341_RS12980	PWY-7104	dTDP-L-megosamine biosynthesis
AM341_RS12980	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AM341_RS12980	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AM341_RS12980	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AM341_RS12980	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AM341_RS12980	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AM341_RS12980	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AM341_RS12980	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AM341_RS12980	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AM341_RS12980	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AM341_RS12980	PWY-7688	AM341_RS12980
AM341_RS12980	PWY-7814	AM341_RS12980
AM341_RS12985	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
AM341_RS12990	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
AM341_RS12990	PWY-7815	AM341_RS12990
AM341_RS12990	PWY-7816	AM341_RS12990
AM341_RS12990	PWY-7819	AM341_RS12990
AM341_RS13000	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AM341_RS13000	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AM341_RS13000	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AM341_RS13000	PWY-7290	<i>Escherichia coli</i> serotype O86 <i>O</i>-antigen biosynthesis
AM341_RS13000	PWY-7530	&beta;-D-galactosaminyl-(1&rarr;3)-<i>N</i>-acetyl-&alpha;-D-galactosamine biosynthesis
AM341_RS13000	PWY-7815	AM341_RS13000
AM341_RS13000	PWY-7816	AM341_RS13000
AM341_RS13000	PWY-7819	AM341_RS13000
AM341_RS13010	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS13055	PWY-5103	L-isoleucine biosynthesis III
AM341_RS13055	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AM341_RS13070	PWY-5101	L-isoleucine biosynthesis II
AM341_RS13070	PWY-5103	L-isoleucine biosynthesis III
AM341_RS13070	PWY-5104	L-isoleucine biosynthesis IV
AM341_RS13070	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AM341_RS13075	PWY-5057	L-valine degradation II
AM341_RS13075	PWY-5076	L-leucine degradation III
AM341_RS13075	PWY-5078	L-isoleucine degradation II
AM341_RS13075	PWY-5101	L-isoleucine biosynthesis II
AM341_RS13075	PWY-5103	L-isoleucine biosynthesis III
AM341_RS13075	PWY-5104	L-isoleucine biosynthesis IV
AM341_RS13075	PWY-5108	L-isoleucine biosynthesis V
AM341_RS13075	PWY-7767	AM341_RS13075
AM341_RS13085	PWY-5101	L-isoleucine biosynthesis II
AM341_RS13085	PWY-5103	L-isoleucine biosynthesis III
AM341_RS13085	PWY-5104	L-isoleucine biosynthesis IV
AM341_RS13085	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AM341_RS13085	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AM341_RS13085	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AM341_RS13085	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AM341_RS13250	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS13260	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS13270	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AM341_RS13270	PWY-5667	CDP-diacylglycerol biosynthesis I
AM341_RS13270	PWY-6453	stigma estolide biosynthesis
AM341_RS13270	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AM341_RS13270	PWY-7587	oleate biosynthesis III (cyanobacteria)
AM341_RS13275	PWY-6749	CMP-legionaminate biosynthesis I
AM341_RS13330	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AM341_RS13330	PWY-6855	chitin degradation I (archaea)
AM341_RS13330	PWY-6906	chitin derivatives degradation
AM341_RS13380	PWY-6012	acyl carrier protein metabolism I
AM341_RS13380	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AM341_RS13480	PWY-7130	L-glucose degradation
AM341_RS13485	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS13485	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AM341_RS13485	PWY-7242	D-fructuronate degradation
AM341_RS13485	PWY-7310	D-glucosaminate degradation
AM341_RS13485	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AM341_RS13490	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS13490	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS13490	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS13490	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS13490	PWY-5723	Rubisco shunt
AM341_RS13490	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS13490	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS13490	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS13490	PWY-7003	glycerol degradation to butanol
AM341_RS13490	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS13490	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS13620	PWY-5101	L-isoleucine biosynthesis II
AM341_RS13620	PWY-5103	L-isoleucine biosynthesis III
AM341_RS13620	PWY-5104	L-isoleucine biosynthesis IV
AM341_RS13620	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AM341_RS13620	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AM341_RS13620	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AM341_RS13620	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AM341_RS13650	PWY-6610	adenine and adenosine salvage IV
AM341_RS13755	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS13795	PWY-5686	UMP biosynthesis
AM341_RS13795	PWY-7790	AM341_RS13795
AM341_RS13795	PWY-7791	AM341_RS13795
AM341_RS13810	PWY-7851	AM341_RS13810
AM341_RS13835	PWY-7851	AM341_RS13835
AM341_RS13840	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AM341_RS13920	PWY-5515	L-arabinose degradation II
AM341_RS13920	PWY-5525	D-glucuronate degradation I
AM341_RS13920	PWY-7378	aminopropanol phosphate biosynthesis II
AM341_RS13940	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS13940	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS13940	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS13940	PWY-5723	Rubisco shunt
AM341_RS13940	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS13940	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS13940	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS13940	PWY-7003	glycerol degradation to butanol
AM341_RS13940	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS13940	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS13965	PWY-5667	CDP-diacylglycerol biosynthesis I
AM341_RS13965	PWY-5981	CDP-diacylglycerol biosynthesis III
AM341_RS13970	PWY-6936	seleno-amino acid biosynthesis
AM341_RS13970	PWY-7274	D-cycloserine biosynthesis
AM341_RS13975	PWY-6004	glycine betaine biosynthesis V (from glycine)
AM341_RS14015	PWY-6531	mannitol cycle
AM341_RS14020	PWY-5723	Rubisco shunt
AM341_RS14145	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AM341_RS14150	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AM341_RS14155	PWY-5686	UMP biosynthesis
AM341_RS14155	PWY-7790	AM341_RS14155
AM341_RS14155	PWY-7791	AM341_RS14155
AM341_RS14160	PWY-4261	glycerol degradation I
AM341_RS14185	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AM341_RS14240	PWY-4261	glycerol degradation I
AM341_RS14300	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS14430	PWY-1001	cellulose biosynthesis
AM341_RS14440	PWY-6788	cellulose degradation II (fungi)
AM341_RS14520	PWY-4321	L-glutamate degradation IV
AM341_RS14600	PWY-4202	arsenate detoxification I (glutaredoxin)
AM341_RS14600	PWY-4621	arsenate detoxification II (glutaredoxin)
AM341_RS14625	PWY-4081	glutathione redox reactions I
AM341_RS14760	PWY-6012	acyl carrier protein metabolism I
AM341_RS14760	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AM341_RS14905	PWY-4041	&gamma;-glutamyl cycle
AM341_RS14905	PWY-5826	hypoglycin biosynthesis
AM341_RS14955	PWY-5530	sorbitol biosynthesis II
AM341_RS14955	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AM341_RS14970	PWY-2941	L-lysine biosynthesis II
AM341_RS14970	PWY-2942	L-lysine biosynthesis III
AM341_RS14970	PWY-5097	L-lysine biosynthesis VI
AM341_RS14970	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS14970	PWY-6559	spermidine biosynthesis II
AM341_RS14970	PWY-6562	norspermidine biosynthesis
AM341_RS14970	PWY-7153	grixazone biosynthesis
AM341_RS14970	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AM341_RS14975	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AM341_RS14975	PWY-622	starch biosynthesis
AM341_RS14985	PWY-622	starch biosynthesis
AM341_RS14990	PWY-622	starch biosynthesis
AM341_RS14995	PWY-5941	glycogen degradation II (eukaryotic)
AM341_RS14995	PWY-6731	starch degradation III
AM341_RS14995	PWY-6737	starch degradation V
AM341_RS14995	PWY-7238	sucrose biosynthesis II
AM341_RS15005	PWY-4261	glycerol degradation I
AM341_RS15005	PWY-6118	glycerol-3-phosphate shuttle
AM341_RS15005	PWY-6952	glycerophosphodiester degradation
AM341_RS15010	PWY-5350	thiosulfate disproportionation III (rhodanese)
AM341_RS15045	PWY-5941	glycogen degradation II (eukaryotic)
AM341_RS15045	PWY-6731	starch degradation III
AM341_RS15045	PWY-6737	starch degradation V
AM341_RS15045	PWY-7238	sucrose biosynthesis II
AM341_RS15050	PWY-5941	glycogen degradation II (eukaryotic)
AM341_RS15050	PWY-6724	starch degradation II
AM341_RS15050	PWY-6737	starch degradation V
AM341_RS15050	PWY-7238	sucrose biosynthesis II
AM341_RS15070	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AM341_RS15130	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS15130	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AM341_RS15200	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AM341_RS15205	PWY-6164	3-dehydroquinate biosynthesis I
AM341_RS15220	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS15220	PWY-5723	Rubisco shunt
AM341_RS15225	PWY-181	photorespiration
AM341_RS15250	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS15255	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AM341_RS15315	PWY-5194	siroheme biosynthesis
AM341_RS15315	PWY-5196	factor 430 biosynthesis
AM341_RS15315	PWY-5441	S-methyl-L-methionine cycle
AM341_RS15315	PWY-702	L-methionine biosynthesis II
AM341_RS15315	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AM341_RS15330	PWY-6683	sulfate reduction III (assimilatory)
AM341_RS15355	PWY-5958	acridone alkaloid biosynthesis
AM341_RS15355	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AM341_RS15355	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AM341_RS15385	PWY-5723	Rubisco shunt
AM341_RS15410	PWY-7731	AM341_RS15410
AM341_RS15740	PWY-6825	phosphatidylcholine biosynthesis V
AM341_RS15775	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AM341_RS16010	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS16010	PWY-5392	reductive TCA cycle II
AM341_RS16010	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AM341_RS16010	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS16010	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS16010	PWY-6728	methylaspartate cycle
AM341_RS16010	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS16010	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AM341_RS16010	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS16075	PWY-2941	L-lysine biosynthesis II
AM341_RS16075	PWY-2942	L-lysine biosynthesis III
AM341_RS16075	PWY-5097	L-lysine biosynthesis VI
AM341_RS16075	PWY-7581	<i>N</i>-acetylneuraminate and <i>N</i>-acetylmannosamine degradation II
AM341_RS16090	PWY-6138	CMP-<i>N</i>-acetylneuraminate biosynthesis I (eukaryotes)
AM341_RS16245	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AM341_RS16245	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AM341_RS16290	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AM341_RS16290	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AM341_RS16325	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AM341_RS16325	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AM341_RS16350	PWY-6614	tetrahydrofolate biosynthesis
AM341_RS16355	PWY-6749	CMP-legionaminate biosynthesis I
AM341_RS16375	PWY-4983	L-citrulline-nitric oxide cycle
AM341_RS16375	PWY-4984	urea cycle
AM341_RS16375	PWY-5	canavanine biosynthesis
AM341_RS16375	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS16375	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AM341_RS16450	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AM341_RS16450	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AM341_RS16450	PWY-6897	thiamin salvage II
AM341_RS16450	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AM341_RS16450	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AM341_RS16450	PWY-7356	thiamin salvage IV (yeast)
AM341_RS16450	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AM341_RS16510	PWY-2201	folate transformations I
AM341_RS16535	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AM341_RS16535	PWY-6855	chitin degradation I (archaea)
AM341_RS16535	PWY-6906	chitin derivatives degradation
AM341_RS16565	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AM341_RS16565	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AM341_RS16575	PWY-6906	chitin derivatives degradation
AM341_RS16575	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AM341_RS16575	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AM341_RS16625	PWY-6497	D-galactarate degradation II
AM341_RS16690	PWY-5437	L-threonine degradation I
AM341_RS16690	PWY-5482	pyruvate fermentation to acetate II
AM341_RS16690	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS16690	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS16690	PWY-7013	L-1,2-propanediol degradation
AM341_RS16695	PWY-5480	pyruvate fermentation to ethanol I
AM341_RS16695	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS16695	PWY-5493	reductive monocarboxylic acid cycle
AM341_RS16770	PWY-4061	glutathione-mediated detoxification I
AM341_RS16770	PWY-6842	glutathione-mediated detoxification II
AM341_RS16770	PWY-7112	4-hydroxy-2-nonenal detoxification
AM341_RS16770	PWY-7533	gliotoxin biosynthesis
AM341_RS16820	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
AM341_RS16820	PWY-7248	pectin degradation III
AM341_RS16860	PWY-6825	phosphatidylcholine biosynthesis V
AM341_RS16905	PWY-6807	xyloglucan degradation II (exoglucanase)
AM341_RS16925	PWY-2	putrescine degradation IV
AM341_RS16925	PWY-6440	spermine and spermidine degradation II
AM341_RS16985	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AM341_RS16985	PWY-5368	dimorphecolate biosynthesis
AM341_RS16985	PWY-5995	linoleate biosynthesis I (plants)
AM341_RS16985	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AM341_RS16985	PWY-6803	phosphatidylcholine acyl editing
AM341_RS16985	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AM341_RS16985	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AM341_RS16985	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AM341_RS16985	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AM341_RS16985	PWY-7470	phosphatidylcholine biosynthesis VII
AM341_RS16985	PWY-7618	ricinoleate biosynthesis
AM341_RS17020	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AM341_RS17020	PWY-6148	tetrahydromethanopterin biosynthesis
AM341_RS17020	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AM341_RS17020	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AM341_RS17025	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AM341_RS17110	PWY-6167	flavin biosynthesis II (archaea)
AM341_RS17110	PWY-6168	flavin biosynthesis III (fungi)
AM341_RS17235	PWY-5667	CDP-diacylglycerol biosynthesis I
AM341_RS17235	PWY-5981	CDP-diacylglycerol biosynthesis III
AM341_RS17235	PWY-6453	stigma estolide biosynthesis
AM341_RS17235	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AM341_RS17235	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AM341_RS17235	PWY-7587	oleate biosynthesis III (cyanobacteria)
AM341_RS17235	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AM341_RS17235	PWY-7782	AM341_RS17235
AM341_RS17280	PWY-6936	seleno-amino acid biosynthesis
AM341_RS17480	PWY-6728	methylaspartate cycle
AM341_RS17480	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS17480	PWY-7118	chitin degradation to ethanol
AM341_RS17480	PWY-7294	xylose degradation IV
AM341_RS17480	PWY-7295	L-arabinose degradation IV
AM341_RS17480	PWY-7854	AM341_RS17480
AM341_RS17690	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AM341_RS17690	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AM341_RS17765	PWY-5482	pyruvate fermentation to acetate II
AM341_RS17765	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS17765	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS17790	PWY-5437	L-threonine degradation I
AM341_RS17790	PWY-7013	L-1,2-propanediol degradation
AM341_RS17790	PWY-7420	monoacylglycerol metabolism (yeast)
AM341_RS17985	PWY-46	putrescine biosynthesis III
AM341_RS17985	PWY-6305	putrescine biosynthesis IV
AM341_RS18060	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS18085	PWY-2201	folate transformations I
AM341_RS18105	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AM341_RS18105	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AM341_RS18125	PWY-40	putrescine biosynthesis I
AM341_RS18125	PWY-43	putrescine biosynthesis II
AM341_RS18125	PWY-6305	putrescine biosynthesis IV
AM341_RS18125	PWY-6834	spermidine biosynthesis III
AM341_RS18130	PWY-40	putrescine biosynthesis I
AM341_RS18130	PWY-6305	putrescine biosynthesis IV
AM341_RS18140	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS18140	PWY-5723	Rubisco shunt
AM341_RS18140	PWY-6891	thiazole biosynthesis II (Bacillus)
AM341_RS18140	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS18140	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS18140	PWY-7560	methylerythritol phosphate pathway II
AM341_RS18150	PWY-5723	Rubisco shunt
AM341_RS18160	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS18185	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS18185	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS18185	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS18185	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS18185	PWY-7003	glycerol degradation to butanol
AM341_RS18190	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS18190	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS18190	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS18190	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS18190	PWY-7385	1,3-propanediol biosynthesis (engineered)
AM341_RS18255	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS18255	PWY-5723	Rubisco shunt
AM341_RS18300	PWY-7799	AM341_RS18300
AM341_RS18300	PWY-7800	AM341_RS18300
AM341_RS18380	PWY-7805	AM341_RS18380
AM341_RS18380	PWY-7807	AM341_RS18380
AM341_RS18395	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AM341_RS18395	PWY-6174	mevalonate pathway II (archaea)
AM341_RS18395	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
AM341_RS18395	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AM341_RS18395	PWY-7102	bisabolene biosynthesis
AM341_RS18395	PWY-7391	isoprene biosynthesis II (engineered)
AM341_RS18395	PWY-7524	mevalonate pathway III (archaea)
AM341_RS18395	PWY-7560	methylerythritol phosphate pathway II
AM341_RS18395	PWY-922	mevalonate pathway I
AM341_RS18430	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS18430	PWY-6606	guanosine nucleotides degradation II
AM341_RS18430	PWY-6608	guanosine nucleotides degradation III
AM341_RS18430	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AM341_RS18460	PWY-6476	cytidylyl molybdenum cofactor biosynthesis
AM341_RS18495	PWY-5686	UMP biosynthesis
AM341_RS18495	PWY-7790	AM341_RS18495
AM341_RS18495	PWY-7791	AM341_RS18495
AM341_RS18745	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AM341_RS18750	PWY-5515	L-arabinose degradation II
AM341_RS18750	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AM341_RS18750	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AM341_RS18760	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AM341_RS18760	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AM341_RS18770	PWY-2941	L-lysine biosynthesis II
AM341_RS18770	PWY-2942	L-lysine biosynthesis III
AM341_RS18770	PWY-5097	L-lysine biosynthesis VI
AM341_RS18780	PWY-6622	heptadecane biosynthesis
AM341_RS18780	PWY-7032	alkane biosynthesis I
AM341_RS18825	PWY-3841	folate transformations II
AM341_RS18825	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS18825	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS18825	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AM341_RS18825	PWY-7199	pyrimidine deoxyribonucleosides salvage
AM341_RS18825	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AM341_RS18870	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS18920	PWY-6823	molybdenum cofactor biosynthesis
AM341_RS18920	PWY-6891	thiazole biosynthesis II (Bacillus)
AM341_RS18920	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS18920	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AM341_RS18955	PWY-4261	glycerol degradation I
AM341_RS18970	PWY-5197	lactate biosynthesis (archaea)
AM341_RS19000	PWY-6700	queuosine biosynthesis
AM341_RS19030	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS19030	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS19030	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS19030	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS19030	PWY-5723	Rubisco shunt
AM341_RS19030	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS19030	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS19030	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS19030	PWY-7003	glycerol degradation to butanol
AM341_RS19030	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS19030	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS19035	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS19035	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS19035	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS19035	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS19035	PWY-5723	Rubisco shunt
AM341_RS19035	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS19035	PWY-6499	D-glucarate degradation II
AM341_RS19035	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS19035	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS19035	PWY-7003	glycerol degradation to butanol
AM341_RS19035	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS19035	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS19070	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AM341_RS19070	PWY-7177	UTP and CTP dephosphorylation II
AM341_RS19070	PWY-7185	UTP and CTP dephosphorylation I
AM341_RS19075	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS19075	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS19075	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS19075	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS19075	PWY-5723	Rubisco shunt
AM341_RS19075	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS19075	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS19075	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS19075	PWY-7003	glycerol degradation to butanol
AM341_RS19075	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS19075	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS19090	PWY-6703	preQ<sub>0</sub> biosynthesis
AM341_RS19095	PWY-4261	glycerol degradation I
AM341_RS19150	PWY-6683	sulfate reduction III (assimilatory)
AM341_RS19155	PWY-6683	sulfate reduction III (assimilatory)
AM341_RS19215	PWY-5278	sulfite oxidation III
AM341_RS19215	PWY-5340	sulfate activation for sulfonation
AM341_RS19215	PWY-6683	sulfate reduction III (assimilatory)
AM341_RS19215	PWY-6932	selenate reduction
AM341_RS19220	PWY-5278	sulfite oxidation III
AM341_RS19220	PWY-5340	sulfate activation for sulfonation
AM341_RS19220	PWY-6683	sulfate reduction III (assimilatory)
AM341_RS19220	PWY-6932	selenate reduction
AM341_RS19225	PWY-5340	sulfate activation for sulfonation
AM341_RS19240	PWY-7560	methylerythritol phosphate pathway II
AM341_RS19245	PWY-7560	methylerythritol phosphate pathway II
AM341_RS19255	PWY-5381	pyridine nucleotide cycling (plants)
AM341_RS19255	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AM341_RS19255	PWY-6596	adenosine nucleotides degradation I
AM341_RS19255	PWY-6606	guanosine nucleotides degradation II
AM341_RS19255	PWY-6607	guanosine nucleotides degradation I
AM341_RS19255	PWY-6608	guanosine nucleotides degradation III
AM341_RS19255	PWY-7185	UTP and CTP dephosphorylation I
AM341_RS19255	PWY-7821	AM341_RS19255
AM341_RS19455	PWY-5723	Rubisco shunt
AM341_RS19460	PWY-5723	Rubisco shunt
AM341_RS19535	PWY-6840	homoglutathione biosynthesis
AM341_RS19535	PWY-7255	ergothioneine biosynthesis I (bacteria)
AM341_RS19540	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AM341_RS19540	PWY-6153	autoinducer AI-2 biosynthesis I
AM341_RS19540	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AM341_RS19595	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AM341_RS19595	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS19595	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AM341_RS19595	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AM341_RS19595	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS19595	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS19595	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS19595	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AM341_RS19600	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AM341_RS19600	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS19600	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AM341_RS19600	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AM341_RS19600	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS19600	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS19600	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS19600	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AM341_RS19675	PWY-181	photorespiration
AM341_RS19765	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AM341_RS19765	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AM341_RS19765	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AM341_RS19805	PWY-6829	tRNA methylation (yeast)
AM341_RS19805	PWY-7285	methylwyosine biosynthesis
AM341_RS19805	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AM341_RS19835	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AM341_RS19835	PWY-6164	3-dehydroquinate biosynthesis I
AM341_RS19835	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AM341_RS19840	PWY-3461	L-tyrosine biosynthesis II
AM341_RS19840	PWY-3462	L-phenylalanine biosynthesis II
AM341_RS19840	PWY-6120	L-tyrosine biosynthesis III
AM341_RS19840	PWY-6627	salinosporamide A biosynthesis
AM341_RS19840	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AM341_RS19840	PWY-7626	bacilysin biosynthesis
AM341_RS19845	PWY-3461	L-tyrosine biosynthesis II
AM341_RS19845	PWY-3462	L-phenylalanine biosynthesis II
AM341_RS19845	PWY-6120	L-tyrosine biosynthesis III
AM341_RS19845	PWY-6627	salinosporamide A biosynthesis
AM341_RS19845	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AM341_RS19845	PWY-7626	bacilysin biosynthesis
AM341_RS19920	PWY-5392	reductive TCA cycle II
AM341_RS19920	PWY-5537	pyruvate fermentation to acetate V
AM341_RS19920	PWY-5538	pyruvate fermentation to acetate VI
AM341_RS19920	PWY-5690	TCA cycle II (plants and fungi)
AM341_RS19920	PWY-5913	TCA cycle VI (obligate autotrophs)
AM341_RS19920	PWY-6728	methylaspartate cycle
AM341_RS19920	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AM341_RS19920	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AM341_RS19975	PWY-5316	nicotine biosynthesis
AM341_RS19975	PWY-7342	superpathway of nicotine biosynthesis
AM341_RS20035	PWY-6012	acyl carrier protein metabolism I
AM341_RS20035	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AM341_RS20065	PWY-5269	cardiolipin biosynthesis II
AM341_RS20065	PWY-5668	cardiolipin biosynthesis I
AM341_RS20065	PWY-7817	AM341_RS20065
AM341_RS20085	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AM341_RS20085	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AM341_RS20085	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AM341_RS20115	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS20115	PWY-181	photorespiration
AM341_RS20115	PWY-2161	folate polyglutamylation
AM341_RS20115	PWY-2201	folate transformations I
AM341_RS20115	PWY-3661	glycine betaine degradation I
AM341_RS20115	PWY-3661-1	glycine betaine degradation II (mammalian)
AM341_RS20115	PWY-3841	folate transformations II
AM341_RS20115	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS20165	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
AM341_RS20175	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
AM341_RS20180	PWY-6690	cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate
AM341_RS20205	PWY-2301	<i>myo</i>-inositol biosynthesis
AM341_RS20205	PWY-4702	phytate degradation I
AM341_RS20205	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AM341_RS20210	PWY-6004	glycine betaine biosynthesis V (from glycine)
AM341_RS20220	PWY-6823	molybdenum cofactor biosynthesis
AM341_RS20220	PWY-6891	thiazole biosynthesis II (Bacillus)
AM341_RS20220	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS20220	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AM341_RS20265	PWY-5350	thiosulfate disproportionation III (rhodanese)
AM341_RS20280	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AM341_RS20280	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AM341_RS20280	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS20280	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS20280	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AM341_RS20280	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AM341_RS20280	PWY-7205	CMP phosphorylation
AM341_RS20280	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AM341_RS20280	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS20280	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS20280	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS20280	PWY-7224	purine deoxyribonucleosides salvage
AM341_RS20280	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS20280	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AM341_RS20285	PWY-2201	folate transformations I
AM341_RS20335	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AM341_RS20335	PWY-6596	adenosine nucleotides degradation I
AM341_RS20335	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS20340	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS20385	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AM341_RS20385	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AM341_RS20390	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AM341_RS20390	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AM341_RS20390	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AM341_RS20400	PWY-7183	pyrimidine nucleobases salvage I
AM341_RS20415	PWY-4202	arsenate detoxification I (glutaredoxin)
AM341_RS20415	PWY-4621	arsenate detoxification II (glutaredoxin)
AM341_RS20505	PWY-2941	L-lysine biosynthesis II
AM341_RS20505	PWY-2942	L-lysine biosynthesis III
AM341_RS20505	PWY-5097	L-lysine biosynthesis VI
AM341_RS20515	PWY-6123	inosine-5'-phosphate biosynthesis I
AM341_RS20515	PWY-6124	inosine-5'-phosphate biosynthesis II
AM341_RS20515	PWY-7234	inosine-5'-phosphate biosynthesis III
AM341_RS20580	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS20580	PWY-5723	Rubisco shunt
AM341_RS20580	PWY-6891	thiazole biosynthesis II (Bacillus)
AM341_RS20580	PWY-6892	thiazole biosynthesis I (E. coli)
AM341_RS20580	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS20580	PWY-7560	methylerythritol phosphate pathway II
AM341_RS20585	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AM341_RS20585	PWY-5723	Rubisco shunt
AM341_RS20590	PWY-1281	sulfoacetaldehyde degradation I
AM341_RS20590	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AM341_RS20590	PWY-5482	pyruvate fermentation to acetate II
AM341_RS20590	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS20590	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS20590	PWY-6637	sulfolactate degradation II
AM341_RS20590	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AM341_RS20610	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AM341_RS20610	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AM341_RS20610	PWY-6268	adenosylcobalamin salvage from cobalamin
AM341_RS20610	PWY-6269	adenosylcobalamin salvage from cobinamide II
AM341_RS20615	PWY-1281	sulfoacetaldehyde degradation I
AM341_RS20615	PWY-5482	pyruvate fermentation to acetate II
AM341_RS20615	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS20615	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS20615	PWY-6637	sulfolactate degradation II
AM341_RS20680	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AM341_RS20760	PWY-6936	seleno-amino acid biosynthesis
AM341_RS20775	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AM341_RS20775	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AM341_RS20795	PWY-6936	seleno-amino acid biosynthesis
AM341_RS20835	PWY-4202	arsenate detoxification I (glutaredoxin)
AM341_RS20835	PWY-5532	adenosine nucleotides degradation IV
AM341_RS20835	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AM341_RS20835	PWY-6608	guanosine nucleotides degradation III
AM341_RS20835	PWY-6609	adenine and adenosine salvage III
AM341_RS20835	PWY-6611	adenine and adenosine salvage V
AM341_RS20835	PWY-6620	guanine and guanosine salvage
AM341_RS20835	PWY-6627	salinosporamide A biosynthesis
AM341_RS20835	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AM341_RS20835	PWY-7179	purine deoxyribonucleosides degradation I
AM341_RS20835	PWY-7179-1	purine deoxyribonucleosides degradation
AM341_RS20875	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AM341_RS20930	PWY-2722	trehalose degradation IV
AM341_RS20930	PWY-2723	trehalose degradation V
AM341_RS20930	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AM341_RS20930	PWY-5661	GDP-glucose biosynthesis
AM341_RS20930	PWY-621	sucrose degradation III (sucrose invertase)
AM341_RS20930	PWY-7238	sucrose biosynthesis II
AM341_RS20930	PWY-7385	1,3-propanediol biosynthesis (engineered)
AM341_RS20935	PWY-6619	adenine and adenosine salvage VI
AM341_RS20945	PWY-7799	AM341_RS20945
AM341_RS20945	PWY-7800	AM341_RS20945
AM341_RS21005	PWY-6695	oxalate degradation II
AM341_RS21010	PWY-6695	oxalate degradation II
AM341_RS21010	PWY-6696	oxalate degradation III
AM341_RS21120	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AM341_RS21120	PWY-6435	4-hydroxybenzoate biosynthesis V
AM341_RS21120	PWY-6863	pyruvate fermentation to hexanol
AM341_RS21120	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AM341_RS21120	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AM341_RS21120	PWY-6948	sitosterol degradation to androstenedione
AM341_RS21120	PWY-7094	fatty acid salvage
AM341_RS21120	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AM341_RS21120	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AM341_RS21120	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AM341_RS21120	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AM341_RS21120	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AM341_RS21120	PWY-735	jasmonic acid biosynthesis
AM341_RS21120	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AM341_RS21120	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AM341_RS21120	PWY-7726	AM341_RS21120
AM341_RS21125	PWY-1361	benzoyl-CoA degradation I (aerobic)
AM341_RS21125	PWY-5109	2-methylbutanoate biosynthesis
AM341_RS21125	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AM341_RS21125	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AM341_RS21125	PWY-5177	glutaryl-CoA degradation
AM341_RS21125	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AM341_RS21125	PWY-6435	4-hydroxybenzoate biosynthesis V
AM341_RS21125	PWY-6583	pyruvate fermentation to butanol I
AM341_RS21125	PWY-6863	pyruvate fermentation to hexanol
AM341_RS21125	PWY-6883	pyruvate fermentation to butanol II
AM341_RS21125	PWY-6944	androstenedione degradation
AM341_RS21125	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AM341_RS21125	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AM341_RS21125	PWY-7007	methyl ketone biosynthesis
AM341_RS21125	PWY-7046	4-coumarate degradation (anaerobic)
AM341_RS21125	PWY-7094	fatty acid salvage
AM341_RS21125	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AM341_RS21125	PWY-735	jasmonic acid biosynthesis
AM341_RS21125	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AM341_RS21125	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AM341_RS21125	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AM341_RS21125	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AM341_RS21125	PWY-7726	AM341_RS21125
AM341_RS21125	PWY-7778	AM341_RS21125
AM341_RS21125	PWY-7779	AM341_RS21125
AM341_RS21125	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
AM341_RS21180	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AM341_RS21230	PWY-181	photorespiration
AM341_RS21235	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AM341_RS21235	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AM341_RS21250	PWY-6679	jadomycin biosynthesis
AM341_RS21250	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AM341_RS21255	PWY-2161	folate polyglutamylation
AM341_RS21270	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AM341_RS21270	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AM341_RS21270	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AM341_RS21270	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AM341_RS21315	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AM341_RS21315	PWY-6148	tetrahydromethanopterin biosynthesis
AM341_RS21315	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AM341_RS21315	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AM341_RS21325	PWY-4061	glutathione-mediated detoxification I
AM341_RS21325	PWY-6842	glutathione-mediated detoxification II
AM341_RS21325	PWY-7112	4-hydroxy-2-nonenal detoxification
AM341_RS21325	PWY-7533	gliotoxin biosynthesis
AM341_RS21345	PWY-1281	sulfoacetaldehyde degradation I
AM341_RS21345	PWY-5482	pyruvate fermentation to acetate II
AM341_RS21345	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS21345	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS21345	PWY-6637	sulfolactate degradation II
AM341_RS21350	PWY-5482	pyruvate fermentation to acetate II
AM341_RS21350	PWY-5485	pyruvate fermentation to acetate IV
AM341_RS21350	PWY-5497	purine nucleobases degradation II (anaerobic)
AM341_RS21510	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AM341_RS21510	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AM341_RS21510	PWY-6406	salicylate biosynthesis I
AM341_RS21515	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AM341_RS21520	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AM341_RS21525	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AM341_RS21530	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS21530	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS21530	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS21530	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS21530	PWY-5723	Rubisco shunt
AM341_RS21530	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AM341_RS21530	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS21530	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS21530	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS21530	PWY-7003	glycerol degradation to butanol
AM341_RS21530	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS21530	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS21535	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AM341_RS21605	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS21605	PWY-1622	formaldehyde assimilation I (serine pathway)
AM341_RS21605	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS21605	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS21605	PWY-5723	Rubisco shunt
AM341_RS21605	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS21605	PWY-6713	L-rhamnose degradation II
AM341_RS21605	PWY-6714	L-rhamnose degradation III
AM341_RS21605	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS21605	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS21605	PWY-7003	glycerol degradation to butanol
AM341_RS21605	PWY-7124	ethylene biosynthesis V (engineered)
AM341_RS21605	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS21615	PWY-6713	L-rhamnose degradation II
AM341_RS21635	PWY-4261	glycerol degradation I
AM341_RS21635	PWY-6118	glycerol-3-phosphate shuttle
AM341_RS21635	PWY-6952	glycerophosphodiester degradation
AM341_RS21640	PWY-4261	glycerol degradation I
AM341_RS21640	PWY-6118	glycerol-3-phosphate shuttle
AM341_RS21640	PWY-6952	glycerophosphodiester degradation
AM341_RS21670	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AM341_RS21670	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS21670	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AM341_RS21670	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AM341_RS21670	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS21670	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS21670	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS21670	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AM341_RS21675	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AM341_RS21675	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS21675	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AM341_RS21675	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AM341_RS21675	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS21675	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS21675	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AM341_RS21675	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AM341_RS21690	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AM341_RS21690	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AM341_RS21690	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AM341_RS21690	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AM341_RS21690	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AM341_RS21690	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AM341_RS21690	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AM341_RS21690	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AM341_RS21690	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AM341_RS21690	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AM341_RS21805	PWY-7254	TCA cycle VII (acetate-producers)
AM341_RS22010	PWY-6531	mannitol cycle
AM341_RS22040	PWY-6619	adenine and adenosine salvage VI
AM341_RS22050	PWY-6019	pseudouridine degradation
AM341_RS22115	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AM341_RS22130	PWY-5663	tetrahydrobiopterin biosynthesis I
AM341_RS22130	PWY-5664	tetrahydrobiopterin biosynthesis II
AM341_RS22130	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AM341_RS22130	PWY-6703	preQ<sub>0</sub> biosynthesis
AM341_RS22130	PWY-6983	tetrahydrobiopterin biosynthesis III
AM341_RS22130	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AM341_RS22130	PWY-7852	AM341_RS22130
AM341_RS22185	PWY-6556	pyrimidine ribonucleosides salvage II
AM341_RS22185	PWY-7181	pyrimidine deoxyribonucleosides degradation
AM341_RS22185	PWY-7193	pyrimidine ribonucleosides salvage I
AM341_RS22185	PWY-7199	pyrimidine deoxyribonucleosides salvage
AM341_RS22245	PWY-6454	vancomycin resistance I
AM341_RS22245	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS22395	PWY-6897	thiamin salvage II
AM341_RS22395	PWY-7356	thiamin salvage IV (yeast)
AM341_RS22395	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AM341_RS22400	PWY-6910	hydroxymethylpyrimidine salvage
AM341_RS22400	PWY-7356	thiamin salvage IV (yeast)
AM341_RS22400	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AM341_RS22440	PWY-4261	glycerol degradation I
AM341_RS22460	PWY-6531	mannitol cycle
AM341_RS22465	PWY-4261	glycerol degradation I
AM341_RS22575	PWY-7193	pyrimidine ribonucleosides salvage I
AM341_RS22580	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AM341_RS22700	PWY-3221	dTDP-L-rhamnose biosynthesis II
AM341_RS22700	PWY-6808	dTDP-D-forosamine biosynthesis
AM341_RS22700	PWY-6942	dTDP-D-desosamine biosynthesis
AM341_RS22700	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AM341_RS22700	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AM341_RS22700	PWY-6974	dTDP-L-olivose biosynthesis
AM341_RS22700	PWY-6976	dTDP-L-mycarose biosynthesis
AM341_RS22700	PWY-7104	dTDP-L-megosamine biosynthesis
AM341_RS22700	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AM341_RS22700	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AM341_RS22700	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AM341_RS22700	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AM341_RS22700	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AM341_RS22700	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AM341_RS22700	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AM341_RS22700	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AM341_RS22700	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AM341_RS22700	PWY-7688	AM341_RS22700
AM341_RS22700	PWY-7814	AM341_RS22700
AM341_RS22705	PWY-3221	dTDP-L-rhamnose biosynthesis II
AM341_RS22705	PWY-6808	dTDP-D-forosamine biosynthesis
AM341_RS22705	PWY-6942	dTDP-D-desosamine biosynthesis
AM341_RS22705	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AM341_RS22705	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AM341_RS22705	PWY-6974	dTDP-L-olivose biosynthesis
AM341_RS22705	PWY-6976	dTDP-L-mycarose biosynthesis
AM341_RS22705	PWY-7104	dTDP-L-megosamine biosynthesis
AM341_RS22705	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AM341_RS22705	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AM341_RS22705	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AM341_RS22705	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AM341_RS22705	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AM341_RS22705	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AM341_RS22705	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AM341_RS22705	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AM341_RS22705	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AM341_RS22705	PWY-7688	AM341_RS22705
AM341_RS22705	PWY-7814	AM341_RS22705
AM341_RS22720	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AM341_RS22720	PWY-7820	AM341_RS22720
AM341_RS22870	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AM341_RS22870	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AM341_RS22965	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AM341_RS22965	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AM341_RS22965	PWY-6269	adenosylcobalamin salvage from cobinamide II
AM341_RS22970	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AM341_RS22970	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AM341_RS22970	PWY-6269	adenosylcobalamin salvage from cobinamide II
AM341_RS22975	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AM341_RS22975	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AM341_RS22975	PWY-6269	adenosylcobalamin salvage from cobinamide II
AM341_RS23240	PWY-3461	L-tyrosine biosynthesis II
AM341_RS23240	PWY-3462	L-phenylalanine biosynthesis II
AM341_RS23240	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AM341_RS23240	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AM341_RS23240	PWY-6120	L-tyrosine biosynthesis III
AM341_RS23240	PWY-6406	salicylate biosynthesis I
AM341_RS23240	PWY-6627	salinosporamide A biosynthesis
AM341_RS23240	PWY-7626	bacilysin biosynthesis
AM341_RS23290	PWY-6617	adenosine nucleotides degradation III
AM341_RS23350	PWY-5691	urate degradation to allantoin I
AM341_RS23350	PWY-7394	urate degradation to allantoin II
AM341_RS23350	PWY-7849	AM341_RS23350
AM341_RS23425	PWY-5656	mannosylglycerate biosynthesis I
AM341_RS23490	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AM341_RS23555	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AM341_RS23555	PWY-622	starch biosynthesis
AM341_RS23640	PWY-5269	cardiolipin biosynthesis II
AM341_RS23640	PWY-5668	cardiolipin biosynthesis I
AM341_RS23640	PWY-7817	AM341_RS23640
AM341_RS23875	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AM341_RS23935	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS23935	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS23935	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS23935	PWY-5723	Rubisco shunt
AM341_RS23935	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AM341_RS23935	PWY-6886	1-butanol autotrophic biosynthesis
AM341_RS23935	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS23935	PWY-7003	glycerol degradation to butanol
AM341_RS23935	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AM341_RS23935	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AM341_RS23945	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AM341_RS23950	PWY-5101	L-isoleucine biosynthesis II
AM341_RS23950	PWY-5103	L-isoleucine biosynthesis III
AM341_RS23950	PWY-5104	L-isoleucine biosynthesis IV
AM341_RS23950	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AM341_RS23955	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AM341_RS23955	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AM341_RS23955	PWY-7242	D-fructuronate degradation
AM341_RS23955	PWY-7310	D-glucosaminate degradation
AM341_RS23955	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AM341_RS24030	PWY-6825	phosphatidylcholine biosynthesis V
AM341_RS24170	PWY-5958	acridone alkaloid biosynthesis
AM341_RS24170	PWY-6543	4-aminobenzoate biosynthesis
AM341_RS24170	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AM341_RS24170	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AM341_RS24195	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AM341_RS24195	PWY-5368	dimorphecolate biosynthesis
AM341_RS24195	PWY-5995	linoleate biosynthesis I (plants)
AM341_RS24195	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AM341_RS24195	PWY-6803	phosphatidylcholine acyl editing
AM341_RS24195	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AM341_RS24195	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
AM341_RS24195	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AM341_RS24195	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AM341_RS24195	PWY-7470	phosphatidylcholine biosynthesis VII
AM341_RS24195	PWY-7618	ricinoleate biosynthesis
AM341_RS24345	PWY-1042	glycolysis IV (plant cytosol)
AM341_RS24345	PWY-5484	glycolysis II (from fructose 6-phosphate)
AM341_RS24345	PWY-6901	superpathway of glucose and xylose degradation
AM341_RS24345	PWY-7003	glycerol degradation to butanol
AM341_RS24430	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AM341_RS24465	PWY-5350	thiosulfate disproportionation III (rhodanese)
AM341_RS24570	PWY-6619	adenine and adenosine salvage VI
AM341_RS24710	PWY-4081	glutathione redox reactions I
AM341_RS24875	PWY-4981	L-proline biosynthesis II (from arginine)
AM341_RS24885	PWY-4981	L-proline biosynthesis II (from arginine)
AM341_RS24885	PWY-4984	urea cycle
AM341_RS24885	PWY-7400	L-arginine biosynthesis IV (archaebacteria)