AM341_RS00005	PF02696	AM341_RS00005
AM341_RS00010	PF10636	Hemin uptake protein hemP
AM341_RS00015	PF00793	DAHP synthetase I family
AM341_RS00020	PF03618	AM341_RS00020
AM341_RS00030	PF00391	PEP-utilising enzyme, mobile domain
AM341_RS00030	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AM341_RS00030	PF02896	PEP-utilising enzyme, TIM barrel domain
AM341_RS00035	PF00501	AMP-binding enzyme
AM341_RS00035	PF13193	AMP-binding enzyme C-terminal domain
AM341_RS00045	PF01494	FAD binding domain
AM341_RS00050	PF00766	Electron transfer flavoprotein FAD-binding domain
AM341_RS00050	PF01012	Electron transfer flavoprotein domain
AM341_RS00055	PF01012	Electron transfer flavoprotein domain
AM341_RS00065	PF02311	AraC-like ligand binding domain
AM341_RS00065	PF12833	Helix-turn-helix domain
AM341_RS00070	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AM341_RS00070	PF02770	Acyl-CoA dehydrogenase, middle domain
AM341_RS00070	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AM341_RS00075	PF01144	Coenzyme A transferase
AM341_RS00080	PF01487	Type I 3-dehydroquinase
AM341_RS00085	PF08501	Shikimate dehydrogenase substrate binding domain
AM341_RS00090	PF07690	Major Facilitator Superfamily
AM341_RS00095	PF07690	Major Facilitator Superfamily
AM341_RS00100	PF08965	Domain of unknown function (DUF1870)
AM341_RS00110	PF01594	AM341_RS00110
AM341_RS00115	PF01565	FAD binding domain
AM341_RS00115	PF02913	FAD linked oxidases, C-terminal domain
AM341_RS00115	PF13183	4Fe-4S dicluster domain
AM341_RS00120	PF03061	Thioesterase superfamily
AM341_RS00125	PF15930	AM341_RS00125
AM341_RS00130	PF01521	Iron-sulphur cluster biosynthesis
AM341_RS00135	PF01458	Uncharacterized protein family (UPF0051)
AM341_RS00140	PF00005	ABC transporter
AM341_RS00145	PF01458	Uncharacterized protein family (UPF0051)
AM341_RS00150	PF00266	Aminotransferase class-V
AM341_RS00155	PF02657	Fe-S metabolism associated domain
AM341_RS00160	PF01476	LysM domain
AM341_RS00160	PF03734	L,D-transpeptidase catalytic domain
AM341_RS00165	PF04728	Lipoprotein leucine-zipper
AM341_RS00170	PF00224	Pyruvate kinase, barrel domain
AM341_RS00170	PF02887	Pyruvate kinase, alpha/beta domain
AM341_RS00175	PF10965	AM341_RS00175
AM341_RS00180	PF12800	4Fe-4S binding domain
AM341_RS00180	PF13247	4Fe-4S dicluster domain
AM341_RS00185	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
AM341_RS00185	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
AM341_RS00195	PF13247	4Fe-4S dicluster domain
AM341_RS00200	PF01292	Prokaryotic cytochrome b561
AM341_RS00210	PF13454	FAD-NAD(P)-binding
AM341_RS00215	PF08803	Putative mono-oxygenase ydhR
AM341_RS00230	PF03212	Pertactin
AM341_RS00230	PF16168	AM341_RS00230
AM341_RS00235	PF01554	MatE
AM341_RS00240	PF00677	Lumazine binding domain
AM341_RS00245	PF02353	Mycolic acid cyclopropane synthetase
AM341_RS00250	PF07690	Major Facilitator Superfamily
AM341_RS00255	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS00255	PF03466	LysR substrate binding domain
AM341_RS00260	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS00260	PF13377	Periplasmic binding protein-like domain
AM341_RS00275	PF07690	Major Facilitator Superfamily
AM341_RS00280	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AM341_RS00280	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AM341_RS00285	PF00877	NlpC/P60 family
AM341_RS00290	PF00462	Glutaredoxin
AM341_RS00295	PF00270	DEAD/DEAH box helicase
AM341_RS00295	PF00271	Helicase conserved C-terminal domain
AM341_RS00295	PF08494	AM341_RS00295
AM341_RS00300	PF00929	Exonuclease
AM341_RS00305	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AM341_RS00310	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AM341_RS00315	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS00315	PF16925	AM341_RS00315
AM341_RS00320	PF06945	AM341_RS00320
AM341_RS00325	PF00248	Aldo/keto reductase family
AM341_RS00330	PF00080	Copper/zinc superoxide dismutase (SODC)
AM341_RS00335	PF04632	AM341_RS00335
AM341_RS00340	PF00529	HlyD family secretion protein
AM341_RS00340	PF16576	AM341_RS00340
AM341_RS00345	PF07869	AM341_RS00345
AM341_RS00350	PF01047	MarR family
AM341_RS00355	PF05433	AM341_RS00355
AM341_RS00360	PF03702	Uncharacterised protein family (UPF0075)
AM341_RS00365	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
AM341_RS00370	PF01243	Pyridoxamine 5'-phosphate oxidase
AM341_RS00370	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AM341_RS00375	PF00579	tRNA synthetases class I (W and Y)
AM341_RS00375	PF01479	S4 domain
AM341_RS00380	PF08543	Phosphomethylpyrimidine kinase
AM341_RS00385	PF00043	Glutathione S-transferase, C-terminal domain
AM341_RS00385	PF13409	Glutathione S-transferase, N-terminal domain
AM341_RS00390	PF00854	POT family
AM341_RS00400	PF00633	Helix-hairpin-helix motif
AM341_RS00400	PF00730	HhH-GPD superfamily base excision DNA repair protein
AM341_RS00400	PF10576	Iron-sulfur binding domain of endonuclease III
AM341_RS00405	PF02508	AM341_RS00405
AM341_RS00410	PF04205	FMN-binding domain
AM341_RS00415	PF03116	AM341_RS00415
AM341_RS00420	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AM341_RS00420	PF10531	SLBB domain
AM341_RS00420	PF12838	4Fe-4S dicluster domain
AM341_RS00420	PF13375	RnfC Barrel sandwich hybrid domain
AM341_RS00425	PF04060	Putative Fe-S cluster
AM341_RS00425	PF14697	4Fe-4S dicluster domain
AM341_RS00430	PF02508	AM341_RS00430
AM341_RS00435	PF10754	AM341_RS00435
AM341_RS00440	PF05321	Haemolysin expression modulating protein
AM341_RS00455	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AM341_RS00455	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AM341_RS00460	PF00962	Adenosine/AMP deaminase
AM341_RS00465	PF00155	Aminotransferase class I and II
AM341_RS00470	PF00367	phosphotransferase system, EIIB
AM341_RS00470	PF02378	Phosphotransferase system, EIIC
AM341_RS00475	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS00475	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AM341_RS00480	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS00485	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS00490	PF00703	Glycosyl hydrolases family 2
AM341_RS00490	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AM341_RS00490	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AM341_RS00495	PF13347	MFS/sugar transport protein
AM341_RS00500	PF03573	outer membrane porin, OprD family
AM341_RS00505	PF06097	AM341_RS00505
AM341_RS00510	PF01238	Phosphomannose isomerase type I
AM341_RS00515	PF05681	AM341_RS00515
AM341_RS00515	PF05683	Fumarase C-terminus
AM341_RS00520	PF00206	Lyase
AM341_RS00520	PF10415	Fumarase C C-terminus
AM341_RS00525	PF05472	DNA replication terminus site-binding protein (Ter protein)
AM341_RS00530	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS00530	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS00535	PF00072	Response regulator receiver domain
AM341_RS00535	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS00540	PF06942	AM341_RS00540
AM341_RS00545	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS00550	PF13520	Amino acid permease
AM341_RS00560	PF07338	Protein of unknown function (DUF1471)
AM341_RS00565	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AM341_RS00565	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AM341_RS00565	PF12769	Domain of unknown function (DUF3814)
AM341_RS00570	PF02233	NAD(P) transhydrogenase beta subunit
AM341_RS00575	PF01594	AM341_RS00575
AM341_RS00585	PF00893	Small Multidrug Resistance protein
AM341_RS00590	PF00893	Small Multidrug Resistance protein
AM341_RS00595	PF00089	Trypsin
AM341_RS00615	PF07690	Major Facilitator Superfamily
AM341_RS00620	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS00620	PF03466	LysR substrate binding domain
AM341_RS00625	PF00480	ROK family
AM341_RS00630	PF13500	AAA domain
AM341_RS00635	PF00654	Voltage gated chloride channel
AM341_RS00640	PF02613	Nitrate reductase delta subunit
AM341_RS00645	PF04976	AM341_RS00645
AM341_RS00650	PF12800	4Fe-4S binding domain
AM341_RS00650	PF13247	4Fe-4S dicluster domain
AM341_RS00655	PF00384	Molybdopterin oxidoreductase
AM341_RS00655	PF01568	Molydopterin dinucleotide binding domain
AM341_RS00655	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AM341_RS00660	PF00384	Molybdopterin oxidoreductase
AM341_RS00660	PF01568	Molydopterin dinucleotide binding domain
AM341_RS00660	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AM341_RS00665	PF06649	AM341_RS00665
AM341_RS00670	PF06788	AM341_RS00670
AM341_RS00675	PF13302	Acetyltransferase (GNAT) domain
AM341_RS00680	PF06932	AM341_RS00680
AM341_RS00685	PF02694	AM341_RS00685
AM341_RS00695	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AM341_RS00695	PF13378	Enolase C-terminal domain-like
AM341_RS00700	PF00107	Zinc-binding dehydrogenase
AM341_RS00700	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS00705	PF07690	Major Facilitator Superfamily
AM341_RS00710	PF01232	Mannitol dehydrogenase Rossmann domain
AM341_RS00710	PF08125	Mannitol dehydrogenase C-terminal domain
AM341_RS00715	PF14001	AM341_RS00715
AM341_RS00720	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS00720	PF07729	FCD domain
AM341_RS00725	PF00106	short chain dehydrogenase
AM341_RS00730	PF01432	Peptidase family M3
AM341_RS00735	PF02464	Competence-damaged protein
AM341_RS00740	PF04076	Bacterial OB fold (BOF) protein
AM341_RS00745	PF00990	GGDEF domain
AM341_RS00755	PF07690	Major Facilitator Superfamily
AM341_RS00760	PF00892	EamA-like transporter family
AM341_RS00765	PF13999	AM341_RS00765
AM341_RS00770	PF12833	Helix-turn-helix domain
AM341_RS00775	PF01047	MarR family
AM341_RS00780	PF01914	AM341_RS00780
AM341_RS00785	PF07690	Major Facilitator Superfamily
AM341_RS00795	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS00795	PF03466	LysR substrate binding domain
AM341_RS00800	PF00171	Aldehyde dehydrogenase family
AM341_RS00805	PF04960	Glutaminase
AM341_RS00810	PF13811	AM341_RS00810
AM341_RS00815	PF00990	GGDEF domain
AM341_RS00825	PF01232	Mannitol dehydrogenase Rossmann domain
AM341_RS00825	PF08125	Mannitol dehydrogenase C-terminal domain
AM341_RS00835	PF01062	AM341_RS00835
AM341_RS00840	PF13649	Methyltransferase domain
AM341_RS00845	PF03992	Antibiotic biosynthesis monooxygenase
AM341_RS00850	PF01791	DeoC/LacD family aldolase
AM341_RS00855	PF13407	Periplasmic binding protein domain
AM341_RS00860	PF02653	AM341_RS00860
AM341_RS00865	PF02653	AM341_RS00865
AM341_RS00870	PF00005	ABC transporter
AM341_RS00875	PF04198	Putative sugar-binding domain
AM341_RS00880	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS00880	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS00885	PF13018	AM341_RS00885
AM341_RS00890	PF03212	Pertactin
AM341_RS00890	PF03797	Autotransporter beta-domain
AM341_RS00895	PF01381	Helix-turn-helix
AM341_RS00900	PF07804	HipA-like C-terminal domain
AM341_RS00900	PF13657	HipA N-terminal domain
AM341_RS00910	PF00577	Outer membrane usher protein
AM341_RS00910	PF13953	PapC C-terminal domain
AM341_RS00915	PF00419	Fimbrial protein
AM341_RS00925	PF09160	FimH, mannose binding
AM341_RS00930	PF00384	Molybdopterin oxidoreductase
AM341_RS00930	PF01568	Molydopterin dinucleotide binding domain
AM341_RS00935	PF17073	AM341_RS00935
AM341_RS00940	PF12833	Helix-turn-helix domain
AM341_RS00945	PF00884	Sulfatase
AM341_RS00950	PF04055	Radical SAM superfamily
AM341_RS00950	PF13186	Iron-sulfur cluster-binding domain
AM341_RS00950	PF13353	4Fe-4S single cluster domain
AM341_RS00955	PF00005	ABC transporter
AM341_RS00955	PF06472	AM341_RS00955
AM341_RS00960	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS00965	PF00675	Insulinase (Peptidase family M16)
AM341_RS00965	PF05193	Peptidase M16 inactive domain
AM341_RS00970	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AM341_RS00975	PF13520	Amino acid permease
AM341_RS00980	PF02638	AM341_RS00980
AM341_RS00985	PF00990	GGDEF domain
AM341_RS00985	PF11563	Protoglobin
AM341_RS00990	PF00563	EAL domain
AM341_RS00990	PF00990	GGDEF domain
AM341_RS00990	PF13426	PAS domain
AM341_RS00995	PF01427	D-ala-D-ala dipeptidase
AM341_RS01000	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS01005	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS01010	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS01010	PF12911	AM341_RS01010
AM341_RS01015	PF00005	ABC transporter
AM341_RS01015	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AM341_RS01020	PF00005	ABC transporter
AM341_RS01020	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AM341_RS01025	PF02566	OsmC-like protein
AM341_RS01035	PF10684	AM341_RS01035
AM341_RS01040	PF08136	AM341_RS01040
AM341_RS01045	PF00390	Malic enzyme, N-terminal domain
AM341_RS01045	PF03949	Malic enzyme, NAD binding domain
AM341_RS01050	PF00107	Zinc-binding dehydrogenase
AM341_RS01050	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS01055	PF01381	Helix-turn-helix
AM341_RS01060	PF01292	Prokaryotic cytochrome b561
AM341_RS01065	PF09163	Formate dehydrogenase N, transmembrane
AM341_RS01065	PF12800	4Fe-4S binding domain
AM341_RS01065	PF13247	4Fe-4S dicluster domain
AM341_RS01075	PF00892	EamA-like transporter family
AM341_RS01080	PF00267	Gram-negative porin
AM341_RS01095	PF07690	Major Facilitator Superfamily
AM341_RS01105	PF13247	4Fe-4S dicluster domain
AM341_RS01105	PF14711	Respiratory nitrate reductase beta C-terminal
AM341_RS01110	PF02613	Nitrate reductase delta subunit
AM341_RS01115	PF02665	Nitrate reductase gamma subunit
AM341_RS01120	PF02567	Phenazine biosynthesis-like protein
AM341_RS01125	PF00797	N-acetyltransferase
AM341_RS01130	PF01613	Flavin reductase like domain
AM341_RS01135	PF01361	Tautomerase enzyme
AM341_RS01140	PF01609	Transposase DDE domain
AM341_RS01140	PF13808	AM341_RS01140
AM341_RS01155	PF03527	AM341_RS01155
AM341_RS01155	PF05593	AM341_RS01155
AM341_RS01160	PF05954	Phage late control gene D protein (GPD)
AM341_RS01165	PF17520	AM341_RS01165
AM341_RS01170	PF13417	Glutathione S-transferase, N-terminal domain
AM341_RS01175	PF00324	Amino acid permease
AM341_RS01195	PF00593	TonB dependent receptor
AM341_RS01195	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS01200	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS01200	PF07729	FCD domain
AM341_RS01205	PF00107	Zinc-binding dehydrogenase
AM341_RS01205	PF16884	AM341_RS01205
AM341_RS01215	PF13420	Acetyltransferase (GNAT) domain
AM341_RS01220	PF04657	AM341_RS01220
AM341_RS01225	PF10735	AM341_RS01225
AM341_RS01230	PF10753	AM341_RS01230
AM341_RS01245	PF00171	Aldehyde dehydrogenase family
AM341_RS01250	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS01255	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS01260	PF00005	ABC transporter
AM341_RS01260	PF08402	TOBE domain
AM341_RS01265	PF13416	Bacterial extracellular solute-binding protein
AM341_RS01270	PF00155	Aminotransferase class I and II
AM341_RS01270	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS01275	PF01381	Helix-turn-helix
AM341_RS01275	PF15919	AM341_RS01275
AM341_RS01280	PF07927	YcfA-like protein
AM341_RS01285	PF10829	AM341_RS01285
AM341_RS01290	PF01136	AM341_RS01290
AM341_RS01290	PF12392	AM341_RS01290
AM341_RS01295	PF01381	Helix-turn-helix
AM341_RS01295	PF07883	Cupin domain
AM341_RS01300	PF03594	AM341_RS01300
AM341_RS01305	PF01385	AM341_RS01305
AM341_RS01305	PF07282	AM341_RS01305
AM341_RS01305	PF12323	AM341_RS01305
AM341_RS01315	PF11769	AM341_RS01315
AM341_RS01320	PF03848	Tellurite resistance protein TehB
AM341_RS01325	PF03595	Voltage-dependent anion channel
AM341_RS01335	PF13302	Acetyltransferase (GNAT) domain
AM341_RS01340	PF04325	Protein of unknown function (DUF465)
AM341_RS01350	PF04349	Periplasmic glucan biosynthesis protein, MdoG
AM341_RS01360	PF07063	Domain of unknown function (DUF1338)
AM341_RS01365	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS01365	PF03466	LysR substrate binding domain
AM341_RS01370	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AM341_RS01370	PF00672	HAMP domain
AM341_RS01370	PF02203	Tar ligand binding domain homologue
AM341_RS01375	PF01848	AM341_RS01375
AM341_RS01385	PF01292	Prokaryotic cytochrome b561
AM341_RS01390	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM341_RS01405	PF00171	Aldehyde dehydrogenase family
AM341_RS01410	PF02698	DUF218 domain
AM341_RS01415	PF00270	DEAD/DEAH box helicase
AM341_RS01415	PF00271	Helicase conserved C-terminal domain
AM341_RS01415	PF04408	Helicase associated domain (HA2)
AM341_RS01415	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AM341_RS01415	PF11898	AM341_RS01415
AM341_RS01420	PF02525	Flavodoxin-like fold
AM341_RS01425	PF00782	Dual specificity phosphatase, catalytic domain
AM341_RS01430	PF12146	Putative lysophospholipase
AM341_RS01430	PF12147	AM341_RS01430
AM341_RS01435	PF01148	Cytidylyltransferase family
AM341_RS01440	PF01066	CDP-alcohol phosphatidyltransferase
AM341_RS01445	PF10971	AM341_RS01445
AM341_RS01450	PF00248	Aldo/keto reductase family
AM341_RS01455	PF03797	Autotransporter beta-domain
AM341_RS01480	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS01485	PF07848	PaaX-like protein
AM341_RS01485	PF08223	PaaX-like protein C-terminal domain
AM341_RS01490	PF00501	AMP-binding enzyme
AM341_RS01490	PF14535	AMP-binding enzyme C-terminal domain
AM341_RS01495	PF00108	Thiolase, N-terminal domain
AM341_RS01495	PF02803	Thiolase, C-terminal domain
AM341_RS01500	PF03061	Thioesterase superfamily
AM341_RS01505	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AM341_RS01505	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AM341_RS01510	PF00378	Enoyl-CoA hydratase/isomerase family
AM341_RS01515	PF00378	Enoyl-CoA hydratase/isomerase family
AM341_RS01520	PF00111	2Fe-2S iron-sulfur cluster binding domain
AM341_RS01520	PF00175	Oxidoreductase NAD-binding domain
AM341_RS01520	PF00970	Oxidoreductase FAD-binding domain
AM341_RS01525	PF01883	Domain of unknown function DUF59
AM341_RS01530	PF05138	Phenylacetic acid catabolic protein
AM341_RS01535	PF06243	Phenylacetic acid degradation B
AM341_RS01540	PF05138	Phenylacetic acid catabolic protein
AM341_RS01545	PF00171	Aldehyde dehydrogenase family
AM341_RS01545	PF01575	MaoC like domain
AM341_RS01550	PF01179	Copper amine oxidase, enzyme domain
AM341_RS01550	PF02727	Copper amine oxidase, N2 domain
AM341_RS01550	PF02728	Copper amine oxidase, N3 domain
AM341_RS01550	PF07833	Copper amine oxidase N-terminal domain
AM341_RS01555	PF00171	Aldehyde dehydrogenase family
AM341_RS01560	PF12833	Helix-turn-helix domain
AM341_RS01560	PF14525	AM341_RS01560
AM341_RS01565	PF07027	AM341_RS01565
AM341_RS01570	PF13617	AM341_RS01570
AM341_RS01575	PF11739	AM341_RS01575
AM341_RS01580	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AM341_RS01580	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AM341_RS01585	PF03724	META domain
AM341_RS01590	PF03891	AM341_RS01590
AM341_RS01595	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
AM341_RS01595	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
AM341_RS01595	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AM341_RS01595	PF10371	Domain of unknown function
AM341_RS01595	PF13484	AM341_RS01595
AM341_RS01595	PF17147	AM341_RS01595
AM341_RS01605	PF00267	Gram-negative porin
AM341_RS01610	PF00582	Universal stress protein family
AM341_RS01615	PF01171	PP-loop family
AM341_RS01620	PF00270	DEAD/DEAH box helicase
AM341_RS01620	PF00271	Helicase conserved C-terminal domain
AM341_RS01620	PF03880	DbpA RNA binding domain
AM341_RS01630	PF01544	CorA-like Mg2+ transporter protein
AM341_RS01635	PF00990	GGDEF domain
AM341_RS01635	PF08448	PAS fold
AM341_RS01640	PF01713	Smr domain
AM341_RS01650	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS01650	PF03466	LysR substrate binding domain
AM341_RS01655	PF01546	Peptidase family M20/M25/M40
AM341_RS01655	PF07687	Peptidase dimerisation domain
AM341_RS01660	PF01546	Peptidase family M20/M25/M40
AM341_RS01670	PF03806	AM341_RS01670
AM341_RS01675	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AM341_RS01675	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AM341_RS01680	PF00027	Cyclic nucleotide-binding domain
AM341_RS01680	PF13545	Crp-like helix-turn-helix domain
AM341_RS01685	PF00582	Universal stress protein family
AM341_RS01690	PF10749	AM341_RS01690
AM341_RS01695	PF00924	Mechanosensitive ion channel
AM341_RS01700	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS01705	PF13737	AM341_RS01705
AM341_RS01710	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS01710	PF03466	LysR substrate binding domain
AM341_RS01715	PF12146	Putative lysophospholipase
AM341_RS01725	PF00246	Zinc carboxypeptidase
AM341_RS01730	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AM341_RS01730	PF13378	Enolase C-terminal domain-like
AM341_RS01735	PF08534	Redoxin
AM341_RS01740	PF00158	Sigma-54 interaction domain
AM341_RS01740	PF13188	PAS domain
AM341_RS01745	PF05128	AM341_RS01745
AM341_RS01750	PF04317	AM341_RS01750
AM341_RS01755	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS01755	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AM341_RS01760	PF09381	Outer membrane protein G (OmpG)
AM341_RS01765	PF00005	ABC transporter
AM341_RS01765	PF08402	TOBE domain
AM341_RS01770	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS01775	PF03632	Glycosyl hydrolase family 65 central catalytic domain
AM341_RS01775	PF03633	Glycosyl hydrolase family 65, C-terminal domain
AM341_RS01775	PF03636	Glycosyl hydrolase family 65, N-terminal domain
AM341_RS01780	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AM341_RS01780	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AM341_RS01785	PF01261	Xylose isomerase-like TIM barrel
AM341_RS01790	PF00107	Zinc-binding dehydrogenase
AM341_RS01795	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS01800	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS01810	PF00128	Alpha amylase, catalytic domain
AM341_RS01815	PF00581	Rhodanese-like domain
AM341_RS01820	PF09584	AM341_RS01820
AM341_RS01825	PF04024	AM341_RS01825
AM341_RS01830	PF06667	AM341_RS01830
AM341_RS01835	PF04012	AM341_RS01835
AM341_RS01840	PF00158	Sigma-54 interaction domain
AM341_RS01840	PF02954	Bacterial regulatory protein, Fis family
AM341_RS01845	PF00202	Aminotransferase class-III
AM341_RS01850	PF01266	FAD dependent oxidoreductase
AM341_RS01855	PF00171	Aldehyde dehydrogenase family
AM341_RS01865	PF01381	Helix-turn-helix
AM341_RS01865	PF07883	Cupin domain
AM341_RS01870	PF07722	Peptidase C26
AM341_RS01875	PF00120	Glutamine synthetase, catalytic domain
AM341_RS01880	PF00324	Amino acid permease
AM341_RS01885	PF10820	AM341_RS01885
AM341_RS01895	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS01900	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS01905	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS01905	PF12911	AM341_RS01905
AM341_RS01910	PF00005	ABC transporter
AM341_RS01910	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AM341_RS01915	PF00005	ABC transporter
AM341_RS01920	PF04480	Protein of unknown function (DUF559)
AM341_RS01925	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS01935	PF00575	S1 RNA binding domain
AM341_RS01935	PF00773	RNB domain
AM341_RS01935	PF08206	Ribonuclease B OB domain
AM341_RS01945	PF00563	EAL domain
AM341_RS01945	PF00990	GGDEF domain
AM341_RS01945	PF13426	PAS domain
AM341_RS01955	PF00455	AM341_RS01955
AM341_RS01955	PF08220	DeoR-like helix-turn-helix domain
AM341_RS01960	PF05433	AM341_RS01960
AM341_RS01965	PF01253	Translation initiation factor SUI1
AM341_RS01970	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM341_RS01975	PF14559	Tetratricopeptide repeat
AM341_RS01980	PF06305	AM341_RS01980
AM341_RS01985	PF01569	PAP2 superfamily
AM341_RS01990	PF00925	GTP cyclohydrolase II
AM341_RS01995	PF00330	Aconitase family (aconitate hydratase)
AM341_RS01995	PF00694	Aconitase C-terminal domain
AM341_RS02025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS02025	PF03466	LysR substrate binding domain
AM341_RS02035	PF01131	DNA topoisomerase
AM341_RS02035	PF01396	AM341_RS02035
AM341_RS02035	PF01751	Toprim domain
AM341_RS02035	PF08272	Topoisomerase I zinc-ribbon-like
AM341_RS02045	PF10692	Protein of unknown function (DUF2498)
AM341_RS02050	PF01343	Peptidase family S49
AM341_RS02050	PF08496	AM341_RS02050
AM341_RS02055	PF00106	short chain dehydrogenase
AM341_RS02060	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
AM341_RS02060	PF12557	Cob(I)alamin adenosyltransferase N terminal
AM341_RS02065	PF00849	RNA pseudouridylate synthase
AM341_RS02065	PF01479	S4 domain
AM341_RS02070	PF09972	AM341_RS02070
AM341_RS02075	PF01300	Telomere recombination
AM341_RS02080	PF02811	PHP domain
AM341_RS02085	PF08255	AM341_RS02085
AM341_RS02090	PF00425	chorismate binding enzyme
AM341_RS02090	PF04715	Anthranilate synthase component I, N terminal region
AM341_RS02095	PF00117	Glutamine amidotransferase class-I
AM341_RS02095	PF00591	Glycosyl transferase family, a/b domain
AM341_RS02095	PF02885	Glycosyl transferase family, helical bundle domain
AM341_RS02100	PF00218	Indole-3-glycerol phosphate synthase
AM341_RS02100	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AM341_RS02105	PF00291	Pyridoxal-phosphate dependent enzyme
AM341_RS02110	PF00290	Tryptophan synthase alpha chain
AM341_RS02115	PF10685	AM341_RS02115
AM341_RS02120	PF05974	Domain of unknown function (DUF892)
AM341_RS02125	PF05974	Domain of unknown function (DUF892)
AM341_RS02130	PF03922	OmpW family
AM341_RS02140	PF06790	AM341_RS02140
AM341_RS02145	PF04279	AM341_RS02145
AM341_RS02150	PF03061	Thioesterase superfamily
AM341_RS02155	PF03544	Gram-negative bacterial TonB protein C-terminal
AM341_RS02155	PF16031	AM341_RS02155
AM341_RS02160	PF03795	YCII-related domain
AM341_RS02165	PF02254	TrkA-N domain
AM341_RS02165	PF07885	Ion channel
AM341_RS02175	PF13091	PLD-like domain
AM341_RS02175	PF13396	AM341_RS02175
AM341_RS02180	PF04269	Protein of unknown function, DUF440
AM341_RS02185	PF00005	ABC transporter
AM341_RS02185	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AM341_RS02190	PF00005	ABC transporter
AM341_RS02190	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AM341_RS02195	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS02195	PF12911	AM341_RS02195
AM341_RS02200	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS02205	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS02215	PF01914	AM341_RS02215
AM341_RS02220	PF00171	Aldehyde dehydrogenase family
AM341_RS02220	PF00465	Iron-containing alcohol dehydrogenase
AM341_RS02230	PF00265	Thymidine kinase
AM341_RS02235	PF00816	H-NS histone family
AM341_RS02240	PF00483	Nucleotidyl transferase
AM341_RS02245	PF00072	Response regulator receiver domain
AM341_RS02250	PF01734	Patatin-like phospholipase
AM341_RS02255	PF02810	SEC-C motif
AM341_RS02260	PF00551	Formyl transferase
AM341_RS02260	PF01842	ACT domain
AM341_RS02295	PF02665	Nitrate reductase gamma subunit
AM341_RS02300	PF02613	Nitrate reductase delta subunit
AM341_RS02305	PF13247	4Fe-4S dicluster domain
AM341_RS02305	PF14711	Respiratory nitrate reductase beta C-terminal
AM341_RS02310	PF00384	Molybdopterin oxidoreductase
AM341_RS02310	PF01568	Molydopterin dinucleotide binding domain
AM341_RS02310	PF14710	Respiratory nitrate reductase alpha N-terminal
AM341_RS02315	PF07690	Major Facilitator Superfamily
AM341_RS02325	PF00672	HAMP domain
AM341_RS02325	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS02325	PF07730	Histidine kinase
AM341_RS02325	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AM341_RS02330	PF00072	Response regulator receiver domain
AM341_RS02330	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS02335	PF11924	Protein of unknown function (DUF3442)
AM341_RS02340	PF02635	DsrE/DsrF-like family
AM341_RS02345	PF04752	AM341_RS02345
AM341_RS02350	PF06150	ChaB
AM341_RS02355	PF01699	Sodium/calcium exchanger protein
AM341_RS02360	PF13940	AM341_RS02360
AM341_RS02365	PF13940	AM341_RS02365
AM341_RS02380	PF00793	DAHP synthetase I family
AM341_RS02385	PF13369	AM341_RS02385
AM341_RS02385	PF13371	Tetratricopeptide repeat
AM341_RS02390	PF04247	AM341_RS02390
AM341_RS02395	PF13847	Methyltransferase domain
AM341_RS02400	PF00472	RF-1 domain
AM341_RS02400	PF03462	PCRF domain
AM341_RS02405	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AM341_RS02405	PF01488	Shikimate / quinate 5-dehydrogenase
AM341_RS02405	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AM341_RS02410	PF03550	Outer membrane lipoprotein LolB
AM341_RS02415	PF00288	GHMP kinases N terminal domain
AM341_RS02415	PF08544	GHMP kinases C terminal
AM341_RS02425	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AM341_RS02425	PF14572	Phosphoribosyl synthetase-associated domain
AM341_RS02435	PF00916	AM341_RS02435
AM341_RS02435	PF01740	STAS domain
AM341_RS02440	PF10762	AM341_RS02440
AM341_RS02445	PF01195	Peptidyl-tRNA hydrolase
AM341_RS02450	PF01926	50S ribosome-binding GTPase
AM341_RS02450	PF06071	Protein of unknown function (DUF933)
AM341_RS02465	PF03212	Pertactin
AM341_RS02465	PF03797	Autotransporter beta-domain
AM341_RS02470	PF00158	Sigma-54 interaction domain
AM341_RS02470	PF00989	PAS fold
AM341_RS02470	PF02954	Bacterial regulatory protein, Fis family
AM341_RS02475	PF02733	Dak1 domain
AM341_RS02480	PF02734	DAK2 domain
AM341_RS02485	PF00381	PTS HPr component phosphorylation site
AM341_RS02485	PF00391	PEP-utilising enzyme, mobile domain
AM341_RS02485	PF03610	PTS system fructose IIA component
AM341_RS02485	PF05524	PEP-utilising enzyme, N-terminal
AM341_RS02495	PF01204	Trehalase
AM341_RS02505	PF04226	AM341_RS02505
AM341_RS02510	PF07238	PilZ domain
AM341_RS02510	PF07317	Flagellar regulator YcgR
AM341_RS02515	PF01464	Transglycosylase SLT domain
AM341_RS02525	PF02016	LD-carboxypeptidase
AM341_RS02530	PF00999	Sodium/hydrogen exchanger family
AM341_RS02530	PF02080	TrkA-C domain
AM341_RS02530	PF03471	Transporter associated domain
AM341_RS02540	PF00842	Alanine racemase, C-terminal domain
AM341_RS02540	PF01168	Alanine racemase, N-terminal domain
AM341_RS02545	PF01266	FAD dependent oxidoreductase
AM341_RS02550	PF04293	AM341_RS02550
AM341_RS02555	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS02555	PF07840	FadR C-terminal domain
AM341_RS02560	PF06450	AM341_RS02560
AM341_RS02565	PF02600	Disulfide bond formation protein DsbB
AM341_RS02570	PF00817	impB/mucB/samB family
AM341_RS02570	PF11798	IMS family HHH motif
AM341_RS02570	PF11799	impB/mucB/samB family C-terminal domain
AM341_RS02570	PF13438	AM341_RS02570
AM341_RS02575	PF00717	Peptidase S24-like
AM341_RS02580	PF06109	Haemolysin E (HlyE)
AM341_RS02585	PF03692	AM341_RS02585
AM341_RS02590	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AM341_RS02595	PF05166	YcgL domain
AM341_RS02600	PF04151	Bacterial pre-peptidase C-terminal domain
AM341_RS02605	PF05666	AM341_RS02605
AM341_RS02615	PF03775	Septum formation inhibitor MinC, C-terminal domain
AM341_RS02615	PF05209	Septum formation inhibitor MinC, N-terminal domain
AM341_RS02620	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AM341_RS02625	PF03776	Septum formation topological specificity factor MinE
AM341_RS02650	PF13436	AM341_RS02650
AM341_RS02650	PF13488	AM341_RS02650
AM341_RS02680	PF00563	EAL domain
AM341_RS02680	PF12792	AM341_RS02680
AM341_RS02690	PF10798	Biofilm development protein YmgB/AriR
AM341_RS02700	PF10798	Biofilm development protein YmgB/AriR
AM341_RS02705	PF00563	EAL domain
AM341_RS02705	PF04940	Sensors of blue-light using FAD
AM341_RS02710	PF13411	MerR HTH family regulatory protein
AM341_RS02715	PF07166	Protein of unknown function (DUF1398)
AM341_RS02725	PF00180	Isocitrate/isopropylmalate dehydrogenase
AM341_RS02730	PF00849	RNA pseudouridylate synthase
AM341_RS02735	PF00293	NUDIX domain
AM341_RS02740	PF03054	tRNA methyl transferase
AM341_RS02745	PF04356	Protein of unknown function (DUF489)
AM341_RS02750	PF00206	Lyase
AM341_RS02750	PF08328	Adenylosuccinate lyase C-terminal
AM341_RS02755	PF00072	Response regulator receiver domain
AM341_RS02755	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS02760	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS02760	PF08918	PhoQ Sensor
AM341_RS02765	PF08007	Cupin superfamily protein
AM341_RS02770	PF01546	Peptidase family M20/M25/M40
AM341_RS02770	PF07687	Peptidase dimerisation domain
AM341_RS02780	PF00005	ABC transporter
AM341_RS02780	PF08402	TOBE domain
AM341_RS02785	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS02795	PF08242	Methyltransferase domain
AM341_RS02810	PF13884	Chaperone of endosialidase
AM341_RS02825	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AM341_RS02825	PF08388	AM341_RS02825
AM341_RS02845	PF06316	Enterobacterial Ail/Lom protein
AM341_RS02850	PF09327	AM341_RS02850
AM341_RS02850	PF12421	AM341_RS02850
AM341_RS02850	PF13550	AM341_RS02850
AM341_RS02855	PF06805	AM341_RS02855
AM341_RS02860	PF00877	NlpC/P60 family
AM341_RS02860	PF14464	Prokaryotic homologs of the JAB domain
AM341_RS02865	PF05100	AM341_RS02865
AM341_RS02870	PF05939	AM341_RS02870
AM341_RS02875	PF06120	AM341_RS02875
AM341_RS02875	PF09718	AM341_RS02875
AM341_RS02880	PF13227	AM341_RS02880
AM341_RS02885	PF06222	Phage tail assembly chaperone
AM341_RS02895	PF11367	Protein of unknown function (DUF3168)
AM341_RS02900	PF04883	AM341_RS02900
AM341_RS02905	PF05521	Phage head-tail joining protein
AM341_RS02910	PF05135	Phage gp6-like head-tail connector protein
AM341_RS02915	PF05065	Phage capsid family
AM341_RS02920	PF04586	AM341_RS02920
AM341_RS02925	PF04860	Phage portal protein
AM341_RS02930	PF03354	AM341_RS02930
AM341_RS02935	PF05119	AM341_RS02935
AM341_RS02940	PF01844	HNH endonuclease
AM341_RS02950	PF06291	AM341_RS02950
AM341_RS02955	PF06085	AM341_RS02955
AM341_RS02965	PF00959	Phage lysozyme
AM341_RS02970	PF07041	AM341_RS02970
AM341_RS02975	PF04971	AM341_RS02975
AM341_RS02985	PF08410	AM341_RS02985
AM341_RS03010	PF03589	Antitermination protein
AM341_RS03015	PF05866	Endodeoxyribonuclease RusA
AM341_RS03020	PF06147	AM341_RS03020
AM341_RS03030	PF01848	AM341_RS03030
AM341_RS03060	PF06163	AM341_RS03060
AM341_RS03070	PF06254	Protein of unknown function (DUF1019)
AM341_RS03075	PF14549	DNA-binding transcriptional regulator Cro
AM341_RS03080	PF00717	Peptidase S24-like
AM341_RS03105	PF05358	AM341_RS03105
AM341_RS03110	PF07358	AM341_RS03110
AM341_RS03115	PF06630	AM341_RS03115
AM341_RS03115	PF16473	AM341_RS03115
AM341_RS03120	PF07825	Excisionase-like protein
AM341_RS03125	PF00589	Phage integrase family
AM341_RS03125	PF09003	Bacteriophage lambda integrase, N-terminal domain
AM341_RS03130	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS03135	PF13416	Bacterial extracellular solute-binding protein
AM341_RS03140	PF12158	AM341_RS03140
AM341_RS03145	PF04536	TLP18
AM341_RS03150	PF02146	Sir2 family
AM341_RS03155	PF00480	ROK family
AM341_RS03160	PF02687	AM341_RS03160
AM341_RS03160	PF12704	MacB-like periplasmic core domain
AM341_RS03165	PF00005	ABC transporter
AM341_RS03170	PF02687	AM341_RS03170
AM341_RS03170	PF12704	MacB-like periplasmic core domain
AM341_RS03175	PF01757	AM341_RS03175
AM341_RS03180	PF00270	DEAD/DEAH box helicase
AM341_RS03180	PF00271	Helicase conserved C-terminal domain
AM341_RS03180	PF02559	CarD-like/TRCF domain
AM341_RS03180	PF03461	TRCF domain
AM341_RS03185	PF01476	LysM domain
AM341_RS03185	PF03734	L,D-transpeptidase catalytic domain
AM341_RS03190	PF07338	Protein of unknown function (DUF1471)
AM341_RS03195	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS03200	PF05433	AM341_RS03200
AM341_RS03205	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS03215	PF05728	Uncharacterised protein family (UPF0227)
AM341_RS03220	PF00933	Glycosyl hydrolase family 3 N terminal domain
AM341_RS03225	PF01636	Phosphotransferase enzyme family
AM341_RS03230	PF13036	Protein of unknown function (DUF3897)
AM341_RS03235	PF07233	Protein of unknown function (DUF1425)
AM341_RS03240	PF01230	HIT domain
AM341_RS03245	PF00593	TonB dependent receptor
AM341_RS03245	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS03250	PF00367	phosphotransferase system, EIIB
AM341_RS03250	PF02378	Phosphotransferase system, EIIC
AM341_RS03255	PF01026	TatD related DNase
AM341_RS03260	PF09115	DNA polymerase III, delta subunit, C terminal
AM341_RS03260	PF13177	DNA polymerase III, delta subunit
AM341_RS03265	PF02223	Thymidylate kinase
AM341_RS03270	PF02618	YceG-like family
AM341_RS03275	PF01063	Aminotransferase class IV
AM341_RS03280	PF00109	Beta-ketoacyl synthase, N-terminal domain
AM341_RS03280	PF02801	Beta-ketoacyl synthase, C-terminal domain
AM341_RS03285	PF00550	Phosphopantetheine attachment site
AM341_RS03290	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS03295	PF00698	Acyl transferase domain
AM341_RS03300	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
AM341_RS03300	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AM341_RS03305	PF02504	Fatty acid synthesis protein
AM341_RS03310	PF01783	Ribosomal L32p protein family
AM341_RS03315	PF02620	AM341_RS03315
AM341_RS03320	PF02545	Maf-like protein
AM341_RS03325	PF00849	RNA pseudouridylate synthase
AM341_RS03325	PF01479	S4 domain
AM341_RS03335	PF10848	AM341_RS03335
AM341_RS03340	PF00575	S1 RNA binding domain
AM341_RS03340	PF10150	Ribonuclease E/G family
AM341_RS03340	PF12111	Polyribonucleotide phosphorylase C terminal
AM341_RS03345	PF00669	Bacterial flagellin N-terminal helical region
AM341_RS03350	PF00460	Flagella basal body rod protein
AM341_RS03350	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AM341_RS03355	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AM341_RS03355	PF10135	AM341_RS03355
AM341_RS03360	PF02119	AM341_RS03360
AM341_RS03365	PF02107	AM341_RS03365
AM341_RS03370	PF00460	Flagella basal body rod protein
AM341_RS03370	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AM341_RS03375	PF00460	Flagella basal body rod protein
AM341_RS03375	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AM341_RS03380	PF00460	Flagella basal body rod protein
AM341_RS03380	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AM341_RS03380	PF07559	Flagellar basal body protein FlaE
AM341_RS03385	PF03963	AM341_RS03385
AM341_RS03385	PF13860	FlgD Ig-like domain
AM341_RS03385	PF13861	FlgD Tudor-like domain
AM341_RS03390	PF00460	Flagella basal body rod protein
AM341_RS03390	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AM341_RS03395	PF00460	Flagella basal body rod protein
AM341_RS03400	PF13144	SAF-like
AM341_RS03405	PF04316	Anti-sigma-28 factor, FlgM
AM341_RS03410	PF05130	FlgN protein
AM341_RS03415	PF03023	AM341_RS03415
AM341_RS03420	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AM341_RS03425	PF04337	Protein of unknown function, DUF480
AM341_RS03430	PF13302	Acetyltransferase (GNAT) domain
AM341_RS03435	PF07690	Major Facilitator Superfamily
AM341_RS03440	PF04399	Glutaredoxin 2, C terminal domain
AM341_RS03440	PF13417	Glutathione S-transferase, N-terminal domain
AM341_RS03445	PF07273	Protein of unknown function (DUF1439)
AM341_RS03450	PF01979	Amidohydrolase family
AM341_RS03455	PF06183	DinI-like family
AM341_RS03465	PF13991	AM341_RS03465
AM341_RS03470	PF01266	FAD dependent oxidoreductase
AM341_RS03475	PF10968	AM341_RS03475
AM341_RS03480	PF01292	Prokaryotic cytochrome b561
AM341_RS03485	PF04264	YceI-like domain
AM341_RS03490	PF00581	Rhodanese-like domain
AM341_RS03490	PF12368	AM341_RS03490
AM341_RS03495	PF03279	AM341_RS03495
AM341_RS03500	PF07690	Major Facilitator Superfamily
AM341_RS03505	PF13984	AM341_RS03505
AM341_RS03510	PF07119	AM341_RS03510
AM341_RS03515	PF00535	Glycosyl transferase family 2
AM341_RS03520	PF04349	Periplasmic glucan biosynthesis protein, MdoG
AM341_RS03535	PF01757	AM341_RS03535
AM341_RS03540	PF13091	PLD-like domain
AM341_RS03545	PF01661	Macro domain
AM341_RS03555	PF10610	Thin aggregative fimbriae synthesis protein
AM341_RS03560	PF07012	AM341_RS03560
AM341_RS03565	PF07012	AM341_RS03565
AM341_RS03580	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS03585	PF10627	AM341_RS03585
AM341_RS03590	PF10614	AM341_RS03590
AM341_RS03595	PF03783	Curli production assembly/transport component CsgG
AM341_RS03600	PF06496	AM341_RS03600
AM341_RS03605	PF02613	Nitrate reductase delta subunit
AM341_RS03610	PF02811	PHP domain
AM341_RS03615	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AM341_RS03645	PF00990	GGDEF domain
AM341_RS03645	PF17158	AM341_RS03645
AM341_RS03655	PF01522	Polysaccharide deacetylase
AM341_RS03655	PF14883	Hypothetical glycosyl hydrolase family 13
AM341_RS03660	PF00535	Glycosyl transferase family 2
AM341_RS03665	PF13994	AM341_RS03665
AM341_RS03670	PF02562	PhoH-like protein
AM341_RS03680	PF04261	Dyp-type peroxidase family
AM341_RS03685	PF09375	Imelysin
AM341_RS03685	PF13473	Cupredoxin-like domain
AM341_RS03690	PF03239	AM341_RS03690
AM341_RS03705	PF00474	Sodium:solute symporter family
AM341_RS03720	PF00171	Aldehyde dehydrogenase family
AM341_RS03720	PF01619	Proline dehydrogenase
AM341_RS03720	PF14850	DNA-binding domain of Proline dehydrogenase
AM341_RS03725	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS03725	PF08362	YcdC-like protein, C-terminal region
AM341_RS03730	PF00296	Luciferase-like monooxygenase
AM341_RS03735	PF00857	Isochorismatase family
AM341_RS03740	PF01042	Endoribonuclease L-PSP
AM341_RS03745	PF00561	alpha/beta hydrolase fold
AM341_RS03750	PF00881	Nitroreductase family
AM341_RS03755	PF01613	Flavin reductase like domain
AM341_RS03760	PF00860	Permease family
AM341_RS03765	PF10685	AM341_RS03765
AM341_RS03775	PF03358	NADPH-dependent FMN reductase
AM341_RS03780	PF13993	AM341_RS03780
AM341_RS03785	PF00328	Histidine phosphatase superfamily (branch 2)
AM341_RS03795	PF00226	DnaJ domain
AM341_RS03795	PF01556	DnaJ C terminal domain
AM341_RS03800	PF13591	MerR HTH family regulatory protein
AM341_RS03805	PF02613	Nitrate reductase delta subunit
AM341_RS03810	PF00384	Molybdopterin oxidoreductase
AM341_RS03810	PF01568	Molydopterin dinucleotide binding domain
AM341_RS03815	PF03264	NapC/NirT cytochrome c family, N-terminal region
AM341_RS03820	PF00072	Response regulator receiver domain
AM341_RS03820	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS03825	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AM341_RS03830	PF00072	Response regulator receiver domain
AM341_RS03830	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS03830	PF01627	Hpt domain
AM341_RS03830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS03835	PF12801	AM341_RS03835
AM341_RS03840	PF08178	AM341_RS03840
AM341_RS03845	PF15939	AM341_RS03845
AM341_RS03855	PF00313	'Cold-shock' DNA-binding domain
AM341_RS03860	PF00313	'Cold-shock' DNA-binding domain
AM341_RS03870	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
AM341_RS03875	PF06251	Capsule biosynthesis GfcC
AM341_RS03880	PF06082	AM341_RS03880
AM341_RS03885	PF02563	Polysaccharide biosynthesis/export protein
AM341_RS03885	PF10531	SLBB domain
AM341_RS03890	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AM341_RS03895	PF02706	Chain length determinant protein
AM341_RS03895	PF13614	AAA domain
AM341_RS03895	PF13807	AM341_RS03895
AM341_RS03900	PF00328	Histidine phosphatase superfamily (branch 2)
AM341_RS03905	PF08173	AM341_RS03905
AM341_RS03910	PF02322	AM341_RS03910
AM341_RS03915	PF01654	AM341_RS03915
AM341_RS03920	PF04809	HupH hydrogenase expression protein, C-terminal conserved region
AM341_RS03925	PF07449	Hydrogenase-1 expression protein HyaE
AM341_RS03930	PF01750	Hydrogenase maturation protease
AM341_RS03935	PF01292	Prokaryotic cytochrome b561
AM341_RS03940	PF00374	Nickel-dependent hydrogenase
AM341_RS03945	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AM341_RS03945	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
AM341_RS03955	PF01027	Inhibitor of apoptosis-promoting Bax1
AM341_RS03960	PF04358	DsrC like protein
AM341_RS03965	PF00708	Acylphosphatase
AM341_RS03970	PF10672	S-adenosylmethionine-dependent methyltransferase
AM341_RS03975	PF08755	Hemimethylated DNA-binding protein YccV like
AM341_RS03980	PF13380	CoA binding domain
AM341_RS03985	PF09829	AM341_RS03985
AM341_RS03990	PF02142	MGS-like domain
AM341_RS03995	PF00580	UvrD/REP helicase N-terminal domain
AM341_RS03995	PF12462	AM341_RS03995
AM341_RS03995	PF13361	UvrD-like helicase C-terminal domain
AM341_RS04000	PF03733	AM341_RS04000
AM341_RS04005	PF12805	AM341_RS04005
AM341_RS04005	PF13515	AM341_RS04005
AM341_RS04010	PF04993	TfoX N-terminal domain
AM341_RS04010	PF04994	TfoX C-terminal domain
AM341_RS04015	PF03846	Cell division inhibitor SulA
AM341_RS04025	PF00691	OmpA family
AM341_RS04025	PF01389	OmpA-like transmembrane domain
AM341_RS04030	PF06303	Organiser of macrodomain of Terminus of chromosome
AM341_RS04030	PF17414	AM341_RS04030
AM341_RS04035	PF05362	Lon protease (S16) C-terminal proteolytic domain
AM341_RS04035	PF13654	AAA domain
AM341_RS04040	PF07977	FabA-like domain
AM341_RS04045	PF04957	Ribosome modulation factor
AM341_RS04050	PF03886	Protein of unknown function (DUF330)
AM341_RS04055	PF02470	AM341_RS04055
AM341_RS04060	PF04403	AM341_RS04060
AM341_RS04065	PF00005	ABC transporter
AM341_RS04065	PF12848	ABC transporter
AM341_RS04065	PF16326	AM341_RS04065
AM341_RS04070	PF01170	Putative RNA methylase family UPF0020
AM341_RS04070	PF02926	THUMP domain
AM341_RS04070	PF10672	S-adenosylmethionine-dependent methyltransferase
AM341_RS04075	PF00111	2Fe-2S iron-sulfur cluster binding domain
AM341_RS04075	PF03473	MOSC domain
AM341_RS04075	PF03476	MOSC N-terminal beta barrel domain
AM341_RS04080	PF07126	AM341_RS04080
AM341_RS04085	PF01180	Dihydroorotate dehydrogenase
AM341_RS04090	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS04090	PF02753	Pili assembly chaperone PapD, C-terminal domain
AM341_RS04095	PF00419	Fimbrial protein
AM341_RS04100	PF00419	Fimbrial protein
AM341_RS04105	PF00419	Fimbrial protein
AM341_RS04110	PF00577	Outer membrane usher protein
AM341_RS04110	PF13953	PapC C-terminal domain
AM341_RS04110	PF13954	PapC N-terminal domain
AM341_RS04115	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS04115	PF02753	Pili assembly chaperone PapD, C-terminal domain
AM341_RS04120	PF00419	Fimbrial protein
AM341_RS04130	PF03358	NADPH-dependent FMN reductase
AM341_RS04135	PF09084	NMT1/THI5 like
AM341_RS04140	PF00296	Luciferase-like monooxygenase
AM341_RS04145	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS04150	PF00005	ABC transporter
AM341_RS04155	PF01433	Peptidase family M1
AM341_RS04155	PF11940	Domain of unknown function (DUF3458)
AM341_RS04155	PF17432	AM341_RS04155
AM341_RS04160	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AM341_RS04165	PF00152	tRNA synthetases class II (D, K and N)
AM341_RS04165	PF01336	OB-fold nucleic acid binding domain
AM341_RS04170	PF00267	Gram-negative porin
AM341_RS04180	PF00155	Aminotransferase class I and II
AM341_RS04185	PF00753	Metallo-beta-lactamase superfamily
AM341_RS04190	PF05951	AM341_RS04190
AM341_RS04200	PF01471	Putative peptidoglycan binding domain
AM341_RS04200	PF03734	L,D-transpeptidase catalytic domain
AM341_RS04205	PF04310	MukB N-terminal
AM341_RS04205	PF13558	Putative exonuclease SbcCD, C subunit
AM341_RS04205	PF16330	AM341_RS04205
AM341_RS04210	PF04288	MukE-like family
AM341_RS04215	PF03882	KicB killing factor
AM341_RS04215	PF17192	AM341_RS04215
AM341_RS04215	PF17193	AM341_RS04215
AM341_RS04220	PF13847	Methyltransferase domain
AM341_RS04230	PF02698	DUF218 domain
AM341_RS04235	PF01636	Phosphotransferase enzyme family
AM341_RS04240	PF02348	Cytidylyltransferase
AM341_RS04245	PF03966	Trm112p-like protein
AM341_RS04250	PF06224	AM341_RS04250
AM341_RS04255	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AM341_RS04260	PF00005	ABC transporter
AM341_RS04260	PF00664	ABC transporter transmembrane region
AM341_RS04265	PF00753	Metallo-beta-lactamase superfamily
AM341_RS04265	PF03772	AM341_RS04265
AM341_RS04270	PF00216	Bacterial DNA-binding protein
AM341_RS04275	PF00575	S1 RNA binding domain
AM341_RS04280	PF02224	Cytidylate kinase
AM341_RS04285	PF01435	Peptidase family M48
AM341_RS04290	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AM341_RS04295	PF00266	Aminotransferase class-V
AM341_RS04300	PF04239	Protein of unknown function (DUF421)
AM341_RS04305	PF02624	YcaO-like family
AM341_RS04310	PF01226	Formate/nitrite transporter
AM341_RS04315	PF01228	Glycine radical
AM341_RS04315	PF02901	Pyruvate formate lyase
AM341_RS04320	PF04055	Radical SAM superfamily
AM341_RS04320	PF13353	4Fe-4S single cluster domain
AM341_RS04325	PF02525	Flavodoxin-like fold
AM341_RS04330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS04330	PF03466	LysR substrate binding domain
AM341_RS04335	PF13520	Amino acid permease
AM341_RS04340	PF07690	Major Facilitator Superfamily
AM341_RS04345	PF00857	Isochorismatase family
AM341_RS04350	PF04976	AM341_RS04350
AM341_RS04355	PF12800	4Fe-4S binding domain
AM341_RS04355	PF13247	4Fe-4S dicluster domain
AM341_RS04360	PF00384	Molybdopterin oxidoreductase
AM341_RS04360	PF01568	Molydopterin dinucleotide binding domain
AM341_RS04360	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AM341_RS04365	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AM341_RS04365	PF02403	Seryl-tRNA synthetase N-terminal domain
AM341_RS04370	PF00004	ATPase family associated with various cellular activities (AAA)
AM341_RS04370	PF12002	MgsA AAA+ ATPase C terminal
AM341_RS04370	PF16193	AM341_RS04370
AM341_RS04375	PF03548	Outer membrane lipoprotein carrier protein LolA
AM341_RS04380	PF01580	FtsK/SpoIIIE family
AM341_RS04380	PF09397	Ftsk gamma domain
AM341_RS04380	PF13491	AM341_RS04380
AM341_RS04385	PF01037	AsnC family
AM341_RS04385	PF13412	Winged helix-turn-helix DNA-binding
AM341_RS04395	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS04400	PF00005	ABC transporter
AM341_RS04400	PF00664	ABC transporter transmembrane region
AM341_RS04405	PF00005	ABC transporter
AM341_RS04405	PF00664	ABC transporter transmembrane region
AM341_RS04410	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AM341_RS04415	PF01176	Translation initiation factor 1A / IF-1
AM341_RS04425	PF00004	ATPase family associated with various cellular activities (AAA)
AM341_RS04425	PF02861	Clp amino terminal domain
AM341_RS04425	PF07724	AAA domain (Cdc48 subfamily)
AM341_RS04425	PF10431	C-terminal, D2-small domain, of ClpB protein
AM341_RS04430	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AM341_RS04435	PF00313	'Cold-shock' DNA-binding domain
AM341_RS04440	PF00005	ABC transporter
AM341_RS04440	PF02687	AM341_RS04440
AM341_RS04440	PF12704	MacB-like periplasmic core domain
AM341_RS04445	PF16576	AM341_RS04445
AM341_RS04450	PF04393	AM341_RS04450
AM341_RS04455	PF11398	Protein of unknown function (DUF2813)
AM341_RS04460	PF00230	Major intrinsic protein
AM341_RS04470	PF03956	AM341_RS04470
AM341_RS04475	PF03063	Prismane/CO dehydrogenase family
AM341_RS04480	PF00111	2Fe-2S iron-sulfur cluster binding domain
AM341_RS04480	PF00175	Oxidoreductase NAD-binding domain
AM341_RS04480	PF00970	Oxidoreductase FAD-binding domain
AM341_RS04485	PF00205	Thiamine pyrophosphate enzyme, central domain
AM341_RS04485	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AM341_RS04485	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AM341_RS04490	PF01212	Beta-eliminating lyase
AM341_RS04495	PF11066	AM341_RS04495
AM341_RS04495	PF13460	NADH(P)-binding
AM341_RS04500	PF01370	NAD dependent epimerase/dehydratase family
AM341_RS04505	PF01510	N-acetylmuramoyl-L-alanine amidase
AM341_RS04510	PF01906	Putative heavy-metal-binding
AM341_RS04515	PF12883	Protein of unknown function (DUF3828)
AM341_RS04520	PF00005	ABC transporter
AM341_RS04525	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS04530	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS04535	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS04540	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS04545	PF05958	tRNA (Uracil-5-)-methyltransferase
AM341_RS04550	PF10767	AM341_RS04550
AM341_RS04555	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS04560	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS04565	PF00005	ABC transporter
AM341_RS04565	PF08402	TOBE domain
AM341_RS04570	PF13416	Bacterial extracellular solute-binding protein
AM341_RS04580	PF10722	Putative bacterial sensory transduction regulator
AM341_RS04585	PF08443	RimK-like ATP-grasp domain
AM341_RS04590	PF00881	Nitroreductase family
AM341_RS04595	PF07214	AM341_RS04595
AM341_RS04600	PF00462	Glutaredoxin
AM341_RS04605	PF11045	AM341_RS04605
AM341_RS04610	PF02080	TrkA-C domain
AM341_RS04610	PF06826	AM341_RS04610
AM341_RS04615	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS04620	PF07690	Major Facilitator Superfamily
AM341_RS04625	PF08282	haloacid dehalogenase-like hydrolase
AM341_RS04635	PF07690	Major Facilitator Superfamily
AM341_RS04640	PF01569	PAP2 superfamily
AM341_RS04645	PF00455	AM341_RS04645
AM341_RS04645	PF08220	DeoR-like helix-turn-helix domain
AM341_RS04650	PF00768	D-alanyl-D-alanine carboxypeptidase
AM341_RS04650	PF07943	Penicillin-binding protein 5, C-terminal domain
AM341_RS04655	PF00043	Glutathione S-transferase, C-terminal domain
AM341_RS04655	PF02798	Glutathione S-transferase, N-terminal domain
AM341_RS04660	PF07995	Glucose / Sorbosone dehydrogenase
AM341_RS04665	PF10799	AM341_RS04665
AM341_RS04670	PF00919	Uncharacterized protein family UPF0004
AM341_RS04670	PF04055	Radical SAM superfamily
AM341_RS04675	PF00990	GGDEF domain
AM341_RS04675	PF17156	AM341_RS04675
AM341_RS04680	PF00563	EAL domain
AM341_RS04680	PF17153	AM341_RS04680
AM341_RS04685	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS04685	PF12911	AM341_RS04685
AM341_RS04690	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS04695	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS04700	PF00005	ABC transporter
AM341_RS04700	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AM341_RS04705	PF01112	Asparaginase
AM341_RS04710	PF00994	Probable molybdopterin binding domain
AM341_RS04710	PF03453	MoeA N-terminal region (domain I and II)
AM341_RS04710	PF03454	MoeA C-terminal region (domain IV)
AM341_RS04715	PF00899	ThiF family
AM341_RS04720	PF00923	Transaldolase
AM341_RS04725	PF04055	Radical SAM superfamily
AM341_RS04725	PF13353	4Fe-4S single cluster domain
AM341_RS04730	PF01228	Glycine radical
AM341_RS04730	PF02901	Pyruvate formate lyase
AM341_RS04735	PF08282	haloacid dehalogenase-like hydrolase
AM341_RS04740	PF07350	Protein of unknown function (DUF1479)
AM341_RS04745	PF00005	ABC transporter
AM341_RS04745	PF12848	ABC transporter
AM341_RS04750	PF03734	L,D-transpeptidase catalytic domain
AM341_RS04755	PF03600	Citrate transporter
AM341_RS04760	PF01325	Iron dependent repressor, N-terminal DNA binding domain
AM341_RS04760	PF02742	Iron dependent repressor, metal binding and dimerisation domain
AM341_RS04770	PF00884	Sulfatase
AM341_RS04775	PF13505	Outer membrane protein beta-barrel domain
AM341_RS04780	PF00892	EamA-like transporter family
AM341_RS04790	PF00210	Ferritin-like domain
AM341_RS04805	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS04810	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS04815	PF00005	ABC transporter
AM341_RS04820	PF00924	Mechanosensitive ion channel
AM341_RS04825	PF05971	Protein of unknown function (DUF890)
AM341_RS04830	PF07338	Protein of unknown function (DUF1471)
AM341_RS04835	PF00593	TonB dependent receptor
AM341_RS04835	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS04840	PF13640	2OG-Fe(II) oxygenase superfamily
AM341_RS04845	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AM341_RS04850	PF07338	Protein of unknown function (DUF1471)
AM341_RS04855	PF02615	Malate/L-lactate dehydrogenase
AM341_RS04860	PF02885	Glycosyl transferase family, helical bundle domain
AM341_RS04865	PF00270	DEAD/DEAH box helicase
AM341_RS04865	PF06733	DEAD_2
AM341_RS04865	PF13307	Helicase C-terminal domain
AM341_RS04875	PF08719	Domain of unknown function (DUF1768)
AM341_RS04880	PF00270	DEAD/DEAH box helicase
AM341_RS04880	PF00271	Helicase conserved C-terminal domain
AM341_RS04885	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS04885	PF09209	Domain of unknown function (DUF1956)
AM341_RS04890	PF16576	AM341_RS04890
AM341_RS04895	PF00005	ABC transporter
AM341_RS04900	PF12698	ABC-2 family transporter protein
AM341_RS04905	PF12698	ABC-2 family transporter protein
AM341_RS04910	PF11076	AM341_RS04910
AM341_RS04915	PF03372	Endonuclease/Exonuclease/phosphatase family
AM341_RS04920	PF13091	PLD-like domain
AM341_RS04925	PF03706	AM341_RS04925
AM341_RS04930	PF01027	Inhibitor of apoptosis-promoting Bax1
AM341_RS04935	PF01027	Inhibitor of apoptosis-promoting Bax1
AM341_RS04940	PF02391	MoaE protein
AM341_RS04945	PF02597	ThiS family
AM341_RS04950	PF01967	MoaC family
AM341_RS04955	PF00994	Probable molybdopterin binding domain
AM341_RS04960	PF04055	Radical SAM superfamily
AM341_RS04960	PF06463	Molybdenum Cofactor Synthesis C
AM341_RS04960	PF13353	4Fe-4S single cluster domain
AM341_RS04965	PF01933	Uncharacterised protein family UPF0052
AM341_RS04970	PF00271	Helicase conserved C-terminal domain
AM341_RS04970	PF02151	UvrB/uvrC motif
AM341_RS04970	PF04851	Type III restriction enzyme, res subunit
AM341_RS04970	PF12344	Ultra-violet resistance protein B
AM341_RS04975	PF13500	AAA domain
AM341_RS04980	PF08241	Methyltransferase domain
AM341_RS04985	PF00155	Aminotransferase class I and II
AM341_RS04990	PF04055	Radical SAM superfamily
AM341_RS04990	PF06968	Biotin and Thiamin Synthesis associated domain
AM341_RS04995	PF00202	Aminotransferase class-III
AM341_RS05000	PF01161	Phosphatidylethanolamine-binding protein
AM341_RS05010	PF01095	Pectinesterase
AM341_RS05015	PF00330	Aconitase family (aconitate hydratase)
AM341_RS05015	PF00694	Aconitase C-terminal domain
AM341_RS05020	PF00939	Sodium:sulfate symporter transmembrane region
AM341_RS05025	PF04303	PrpF protein
AM341_RS05030	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS05030	PF03466	LysR substrate binding domain
AM341_RS05035	PF10282	Lactonase, 7-bladed beta-propeller
AM341_RS05040	PF08282	haloacid dehalogenase-like hydrolase
AM341_RS05045	PF00005	ABC transporter
AM341_RS05045	PF03459	TOBE domain
AM341_RS05050	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS05055	PF13531	Bacterial extracellular solute-binding protein
AM341_RS05065	PF10766	Protein of unknown function (DUF2592)
AM341_RS05070	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS05070	PF03459	TOBE domain
AM341_RS05075	PF00005	ABC transporter
AM341_RS05080	PF16363	AM341_RS05080
AM341_RS05085	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AM341_RS05085	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AM341_RS05090	PF00288	GHMP kinases N terminal domain
AM341_RS05090	PF08544	GHMP kinases C terminal
AM341_RS05090	PF10509	Galactokinase galactose-binding signature
AM341_RS05095	PF01263	Aldose 1-epimerase
AM341_RS05100	PF00300	Histidine phosphatase superfamily (branch 1)
AM341_RS05105	PF00793	DAHP synthetase I family
AM341_RS05115	PF13985	AM341_RS05115
AM341_RS05120	PF01545	Cation efflux family
AM341_RS05125	PF04973	AM341_RS05125
AM341_RS05130	PF02445	Quinolinate synthetase A protein
AM341_RS05175	PF13174	Tetratricopeptide repeat
AM341_RS05175	PF13432	Tetratricopeptide repeat
AM341_RS05175	PF16331	AM341_RS05175
AM341_RS05180	PF00691	OmpA family
AM341_RS05185	PF04052	TolB amino-terminal domain
AM341_RS05185	PF07676	WD40-like Beta Propeller Repeat
AM341_RS05190	PF06519	TolA C-terminal
AM341_RS05195	PF02472	Biopolymer transport protein ExbD/TolR
AM341_RS05200	PF01618	AM341_RS05200
AM341_RS05205	PF03061	Thioesterase superfamily
AM341_RS05210	PF09600	AM341_RS05210
AM341_RS05215	PF08173	AM341_RS05215
AM341_RS05220	PF02322	AM341_RS05220
AM341_RS05225	PF01654	AM341_RS05225
AM341_RS05235	PF01074	Glycosyl hydrolases family 38 N-terminal domain
AM341_RS05235	PF07748	Glycosyl hydrolases family 38 C-terminal domain
AM341_RS05235	PF09261	Alpha mannosidase, middle domain
AM341_RS05240	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS05240	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS05240	PF02378	Phosphotransferase system, EIIC
AM341_RS05245	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS05245	PF07702	UTRA domain
AM341_RS05250	PF00549	CoA-ligase
AM341_RS05250	PF02629	CoA binding domain
AM341_RS05255	PF00549	CoA-ligase
AM341_RS05255	PF08442	ATP-grasp domain
AM341_RS05260	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AM341_RS05260	PF00364	Biotin-requiring enzyme
AM341_RS05260	PF02817	e3 binding domain
AM341_RS05265	PF00676	Dehydrogenase E1 component
AM341_RS05265	PF02779	Transketolase, pyrimidine binding domain
AM341_RS05265	PF16078	AM341_RS05265
AM341_RS05265	PF16870	AM341_RS05265
AM341_RS05270	PF13085	2Fe-2S iron-sulfur cluster binding domain
AM341_RS05270	PF13534	4Fe-4S dicluster domain
AM341_RS05275	PF00890	FAD binding domain
AM341_RS05275	PF02910	Fumarate reductase flavoprotein C-term
AM341_RS05280	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AM341_RS05285	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AM341_RS05300	PF00285	Citrate synthase
AM341_RS05305	PF00419	Fimbrial protein
AM341_RS05310	PF00577	Outer membrane usher protein
AM341_RS05310	PF13953	PapC C-terminal domain
AM341_RS05310	PF13954	PapC N-terminal domain
AM341_RS05315	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS05315	PF02753	Pili assembly chaperone PapD, C-terminal domain
AM341_RS05320	PF00419	Fimbrial protein
AM341_RS05325	PF05145	AM341_RS05325
AM341_RS05330	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM341_RS05330	PF06827	Zinc finger found in FPG and IleRS
AM341_RS05330	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AM341_RS05335	PF03746	LamB/YcsF family
AM341_RS05340	PF02626	Allophanate hydrolase subunit 2
AM341_RS05345	PF02682	Allophanate hydrolase subunit 1
AM341_RS05350	PF01784	NIF3 (NGG1p interacting factor 3)
AM341_RS05355	PF00854	POT family
AM341_RS05360	PF00875	DNA photolyase
AM341_RS05360	PF03441	FAD binding domain of DNA photolyase
AM341_RS05365	PF08349	AM341_RS05365
AM341_RS05400	PF03527	AM341_RS05400
AM341_RS05400	PF05593	AM341_RS05400
AM341_RS05405	PF10725	AM341_RS05405
AM341_RS05410	PF09604	AM341_RS05410
AM341_RS05415	PF03814	AM341_RS05415
AM341_RS05420	PF00122	E1-E2 ATPase
AM341_RS05420	PF00702	haloacid dehalogenase-like hydrolase
AM341_RS05425	PF02669	AM341_RS05425
AM341_RS05430	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS05430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS05430	PF02702	Osmosensitive K+ channel His kinase sensor domain
AM341_RS05430	PF13492	GAF domain
AM341_RS05430	PF13493	Domain of unknown function (DUF4118)
AM341_RS05435	PF00072	Response regulator receiver domain
AM341_RS05435	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS05450	PF13520	Amino acid permease
AM341_RS05460	PF10946	AM341_RS05460
AM341_RS05470	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AM341_RS05470	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AM341_RS05470	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AM341_RS05470	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AM341_RS05475	PF03925	SeqA protein
AM341_RS05475	PF17206	AM341_RS05475
AM341_RS05480	PF12697	Alpha/beta hydrolase family
AM341_RS05485	PF01402	Ribbon-helix-helix protein, copG family
AM341_RS05490	PF00258	Flavodoxin
AM341_RS05500	PF01475	Ferric uptake regulator family
AM341_RS05505	PF13982	AM341_RS05505
AM341_RS05510	PF03573	outer membrane porin, OprD family
AM341_RS05515	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AM341_RS05515	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AM341_RS05520	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AM341_RS05520	PF00367	phosphotransferase system, EIIB
AM341_RS05520	PF02378	Phosphotransferase system, EIIC
AM341_RS05525	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AM341_RS05530	PF01979	Amidohydrolase family
AM341_RS05535	PF00480	ROK family
AM341_RS05535	PF01047	MarR family
AM341_RS05540	PF13242	HAD-hyrolase-like
AM341_RS05540	PF13344	Haloacid dehalogenase-like hydrolase
AM341_RS05550	PF00733	Asparagine synthase
AM341_RS05550	PF13537	Glutamine amidotransferase domain
AM341_RS05595	PF01494	FAD binding domain
AM341_RS05600	PF00919	Uncharacterized protein family UPF0004
AM341_RS05600	PF01938	TRAM domain
AM341_RS05600	PF04055	Radical SAM superfamily
AM341_RS05605	PF02562	PhoH-like protein
AM341_RS05610	PF02130	Uncharacterized protein family UPF0054
AM341_RS05615	PF00571	CBS domain
AM341_RS05615	PF03471	Transporter associated domain
AM341_RS05620	PF00795	Carbon-nitrogen hydrolase
AM341_RS05625	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS05630	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS05635	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS05640	PF00005	ABC transporter
AM341_RS05645	PF01156	Inosine-uridine preferring nucleoside hydrolase
AM341_RS05650	PF00012	Hsp70 protein
AM341_RS05660	PF06889	AM341_RS05660
AM341_RS05665	PF08238	Sel1 repeat
AM341_RS05675	PF06889	AM341_RS05675
AM341_RS05680	PF08238	Sel1 repeat
AM341_RS05685	PF07295	AM341_RS05685
AM341_RS05690	PF00133	tRNA synthetases class I (I, L, M and V)
AM341_RS05690	PF08264	Anticodon-binding domain of tRNA
AM341_RS05690	PF13603	Leucyl-tRNA synthetase, Domain 2
AM341_RS05695	PF04390	Lipopolysaccharide-assembly
AM341_RS05700	PF06144	DNA polymerase III, delta subunit
AM341_RS05700	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
AM341_RS05705	PF01467	Cytidylyltransferase
AM341_RS05710	PF00300	Histidine phosphatase superfamily (branch 1)
AM341_RS05715	PF02410	Oligomerisation domain
AM341_RS05720	PF02590	Predicted SPOUT methyltransferase
AM341_RS05725	PF00905	Penicillin binding protein transpeptidase domain
AM341_RS05725	PF03717	Penicillin-binding Protein dimerisation domain
AM341_RS05730	PF01098	AM341_RS05730
AM341_RS05735	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
AM341_RS05735	PF05036	Sporulation related domain
AM341_RS05740	PF00768	D-alanyl-D-alanine carboxypeptidase
AM341_RS05740	PF07943	Penicillin-binding protein 5, C-terminal domain
AM341_RS05745	PF04359	Protein of unknown function (DUF493)
AM341_RS05750	PF03099	Biotin/lipoate A/B protein ligase family
AM341_RS05760	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS05760	PF03466	LysR substrate binding domain
AM341_RS05770	PF04055	Radical SAM superfamily
AM341_RS05770	PF16881	AM341_RS05770
AM341_RS05775	PF02416	mttA/Hcf106 family
AM341_RS05785	PF02537	AM341_RS05785
AM341_RS05790	PF00313	'Cold-shock' DNA-binding domain
AM341_RS05795	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
AM341_RS05805	PF03606	AM341_RS05805
AM341_RS05810	PF00072	Response regulator receiver domain
AM341_RS05810	PF12431	AM341_RS05810
AM341_RS05815	PF00989	PAS fold
AM341_RS05815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS05815	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AM341_RS05815	PF17203	AM341_RS05815
AM341_RS05820	PF08218	Citrate lyase ligase C-terminal domain
AM341_RS05825	PF06857	AM341_RS05825
AM341_RS05830	PF03328	HpcH/HpaI aldolase/citrate lyase family
AM341_RS05835	PF04223	Citrate lyase, alpha subunit (CitF)
AM341_RS05840	PF03802	AM341_RS05840
AM341_RS05845	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
AM341_RS05850	PF00939	Sodium:sulfate symporter transmembrane region
AM341_RS05855	PF00445	Ribonuclease T2 family
AM341_RS05865	PF01272	Transcription elongation factor, GreA/GreB, C-term
AM341_RS05865	PF14760	Rnk N-terminus
AM341_RS05875	PF00107	Zinc-binding dehydrogenase
AM341_RS05875	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS05875	PF13823	Alcohol dehydrogenase GroES-associated
AM341_RS05895	PF00582	Universal stress protein family
AM341_RS05900	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS05900	PF13192	Thioredoxin domain
AM341_RS05905	PF00578	AhpC/TSA family
AM341_RS05905	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AM341_RS05910	PF13098	Thioredoxin-like domain
AM341_RS05920	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS05920	PF03466	LysR substrate binding domain
AM341_RS05925	PF01507	Phosphoadenosine phosphosulfate reductase family
AM341_RS05925	PF11922	AM341_RS05925
AM341_RS05930	PF02195	ParB-like nuclease domain
AM341_RS05935	PF00155	Aminotransferase class I and II
AM341_RS05940	PF00465	Iron-containing alcohol dehydrogenase
AM341_RS05945	PF04328	AM341_RS05945
AM341_RS05950	PF02554	AM341_RS05950
AM341_RS05950	PF13722	AM341_RS05950
AM341_RS05955	PF03061	Thioesterase superfamily
AM341_RS05960	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS05965	PF00550	Phosphopantetheine attachment site
AM341_RS05965	PF00857	Isochorismatase family
AM341_RS05970	PF00501	AMP-binding enzyme
AM341_RS05970	PF13193	AMP-binding enzyme C-terminal domain
AM341_RS05975	PF00425	chorismate binding enzyme
AM341_RS05985	PF01497	Periplasmic binding protein
AM341_RS05990	PF05977	Transmembrane secretion effector
AM341_RS05995	PF01032	FecCD transport family
AM341_RS06000	PF01032	FecCD transport family
AM341_RS06005	PF00005	ABC transporter
AM341_RS06010	PF02706	Chain length determinant protein
AM341_RS06015	PF00501	AMP-binding enzyme
AM341_RS06015	PF00550	Phosphopantetheine attachment site
AM341_RS06015	PF00668	Condensation domain
AM341_RS06015	PF00975	Thioesterase domain
AM341_RS06015	PF13193	AMP-binding enzyme C-terminal domain
AM341_RS06020	PF03621	MbtH-like protein
AM341_RS06025	PF00756	Putative esterase
AM341_RS06025	PF11806	Domain of unknown function (DUF3327)
AM341_RS06030	PF00593	TonB dependent receptor
AM341_RS06030	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS06035	PF01648	4'-phosphopantetheinyl transferase superfamily
AM341_RS06045	PF01609	Transposase DDE domain
AM341_RS06050	PF01848	AM341_RS06050
AM341_RS06065	PF04107	Glutamate-cysteine ligase family 2(GCS2)
AM341_RS06070	PF13610	AM341_RS06070
AM341_RS06085	PF00583	Acetyltransferase (GNAT) family
AM341_RS06090	PF13693	Winged helix-turn-helix DNA-binding
AM341_RS06100	PF13737	AM341_RS06100
AM341_RS06110	PF00534	Glycosyl transferases group 1
AM341_RS06110	PF00535	Glycosyl transferase family 2
AM341_RS06115	PF13847	Methyltransferase domain
AM341_RS06120	PF00534	Glycosyl transferases group 1
AM341_RS06120	PF13477	Glycosyl transferase 4-like
AM341_RS06125	PF00534	Glycosyl transferases group 1
AM341_RS06125	PF13439	Glycosyltransferase Family 4
AM341_RS06130	PF00005	ABC transporter
AM341_RS06135	PF01061	AM341_RS06135
AM341_RS06140	PF00534	Glycosyl transferases group 1
AM341_RS06145	PF16363	AM341_RS06145
AM341_RS06150	PF00483	Nucleotidyl transferase
AM341_RS06170	PF13610	AM341_RS06170
AM341_RS06175	PF00881	Nitroreductase family
AM341_RS06180	PF00924	Mechanosensitive ion channel
AM341_RS06185	PF00324	Amino acid permease
AM341_RS06190	PF00873	AcrB/AcrD/AcrF family
AM341_RS06195	PF00529	HlyD family secretion protein
AM341_RS06195	PF16576	AM341_RS06195
AM341_RS06200	PF11604	Copper binding periplasmic protein CusF
AM341_RS06205	PF02321	Outer membrane efflux protein
AM341_RS06215	PF00072	Response regulator receiver domain
AM341_RS06215	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS06220	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS06220	PF00672	HAMP domain
AM341_RS06220	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS06225	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AM341_RS06225	PF13632	Glycosyl transferase family group 2
AM341_RS06230	PF13283	AM341_RS06230
AM341_RS06230	PF13429	Tetratricopeptide repeat
AM341_RS06235	PF14488	Domain of unknown function (DUF4434)
AM341_RS06245	PF12833	Helix-turn-helix domain
AM341_RS06260	PF00072	Response regulator receiver domain
AM341_RS06260	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS06265	PF00419	Fimbrial protein
AM341_RS06270	PF00419	Fimbrial protein
AM341_RS06275	PF00577	Outer membrane usher protein
AM341_RS06275	PF13953	PapC C-terminal domain
AM341_RS06275	PF13954	PapC N-terminal domain
AM341_RS06280	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS06280	PF02753	Pili assembly chaperone PapD, C-terminal domain
AM341_RS06285	PF00419	Fimbrial protein
AM341_RS06290	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AM341_RS06290	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AM341_RS06295	PF13275	S4 domain
AM341_RS06300	PF04307	AM341_RS06300
AM341_RS06305	PF01406	tRNA synthetases class I (C) catalytic domain
AM341_RS06305	PF09190	DALR domain
AM341_RS06310	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AM341_RS06315	PF12850	Calcineurin-like phosphoesterase superfamily domain
AM341_RS06325	PF00731	AIR carboxylase
AM341_RS06330	PF02222	ATP-grasp domain
AM341_RS06335	PF00696	Amino acid kinase family
AM341_RS06340	PF11392	AM341_RS06340
AM341_RS06345	PF06545	Protein of unknown function (DUF1116)
AM341_RS06350	PF00549	CoA-ligase
AM341_RS06350	PF02629	CoA binding domain
AM341_RS06355	PF02615	Malate/L-lactate dehydrogenase
AM341_RS06360	PF01546	Peptidase family M20/M25/M40
AM341_RS06365	PF05899	Protein of unknown function (DUF861)
AM341_RS06365	PF07883	Cupin domain
AM341_RS06370	PF02595	Glycerate kinase family
AM341_RS06375	PF00860	Permease family
AM341_RS06380	PF01979	Amidohydrolase family
AM341_RS06385	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AM341_RS06390	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AM341_RS06390	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AM341_RS06395	PF01261	Xylose isomerase-like TIM barrel
AM341_RS06400	PF00205	Thiamine pyrophosphate enzyme, central domain
AM341_RS06400	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AM341_RS06400	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AM341_RS06405	PF01614	Bacterial transcriptional regulator
AM341_RS06405	PF09339	IclR helix-turn-helix domain
AM341_RS06410	PF04115	Ureidoglycolate hydrolase
AM341_RS06415	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS06415	PF03466	LysR substrate binding domain
AM341_RS06440	PF15631	AM341_RS06440
AM341_RS06455	PF00005	ABC transporter
AM341_RS06460	PF13472	GDSL-like Lipase/Acylhydrolase family
AM341_RS06465	PF00106	short chain dehydrogenase
AM341_RS06470	PF00085	Thioredoxin
AM341_RS06470	PF14559	Tetratricopeptide repeat
AM341_RS06470	PF14561	Tetratricopeptide repeat
AM341_RS06475	PF03649	AM341_RS06475
AM341_RS06480	PF00005	ABC transporter
AM341_RS06485	PF01145	SPFH domain / Band 7 family
AM341_RS06485	PF16200	AM341_RS06485
AM341_RS06490	PF01957	NfeD-like C-terminal, partner-binding
AM341_RS06495	PF13411	MerR HTH family regulatory protein
AM341_RS06500	PF13520	Amino acid permease
AM341_RS06505	PF04960	Glutaminase
AM341_RS06510	PF00122	E1-E2 ATPase
AM341_RS06510	PF00403	Heavy-metal-associated domain
AM341_RS06510	PF00702	haloacid dehalogenase-like hydrolase
AM341_RS06515	PF01381	Helix-turn-helix
AM341_RS06525	PF01963	AM341_RS06525
AM341_RS06535	PF04073	Aminoacyl-tRNA editing domain
AM341_RS06540	PF00149	Calcineurin-like phosphoesterase
AM341_RS06540	PF02872	5'-nucleotidase, C-terminal domain
AM341_RS06550	PF07690	Major Facilitator Superfamily
AM341_RS06555	PF00999	Sodium/hydrogen exchanger family
AM341_RS06555	PF02254	TrkA-N domain
AM341_RS06560	PF00294	pfkB family carbohydrate kinase
AM341_RS06565	PF07859	alpha/beta hydrolase fold
AM341_RS06570	PF00762	Ferrochelatase
AM341_RS06575	PF00406	Adenylate kinase
AM341_RS06575	PF05191	Adenylate kinase, active site lid
AM341_RS06585	PF00183	Hsp90 protein
AM341_RS06585	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS06590	PF02132	RecR protein
AM341_RS06590	PF13662	Toprim domain
AM341_RS06595	PF02575	YbaB/EbfC DNA-binding family
AM341_RS06600	PF12168	AM341_RS06600
AM341_RS06600	PF12169	DNA polymerase III subunits gamma and tau domain III
AM341_RS06600	PF12170	DNA polymerase III tau subunit V interacting with alpha
AM341_RS06600	PF13177	DNA polymerase III, delta subunit
AM341_RS06605	PF00156	Phosphoribosyl transferase domain
AM341_RS06615	PF04304	AM341_RS06615
AM341_RS06620	PF07445	Primosomal replication protein priB and priC
AM341_RS06625	PF10689	AM341_RS06625
AM341_RS06630	PF00924	Mechanosensitive ion channel
AM341_RS06630	PF12794	AM341_RS06630
AM341_RS06630	PF12795	AM341_RS06630
AM341_RS06640	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS06640	PF08361	MAATS-type transcriptional repressor, C-terminal region
AM341_RS06645	PF00529	HlyD family secretion protein
AM341_RS06645	PF16576	AM341_RS06645
AM341_RS06650	PF00873	AcrB/AcrD/AcrF family
AM341_RS06655	PF10757	AM341_RS06655
AM341_RS06660	PF05321	Haemolysin expression modulating protein
AM341_RS06665	PF12464	Maltose acetyltransferase
AM341_RS06665	PF14602	Hexapeptide repeat of succinyl-transferase
AM341_RS06670	PF10777	AM341_RS06670
AM341_RS06675	PF00563	EAL domain
AM341_RS06675	PF12792	AM341_RS06675
AM341_RS06680	PF07237	Protein of unknown function (DUF1428)
AM341_RS06690	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AM341_RS06695	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AM341_RS06700	PF13622	Thioesterase-like superfamily
AM341_RS06705	PF00909	Ammonium Transporter Family
AM341_RS06710	PF00543	Nitrogen regulatory protein P-II
AM341_RS06715	PF00005	ABC transporter
AM341_RS06715	PF00664	ABC transporter transmembrane region
AM341_RS06720	PF00005	ABC transporter
AM341_RS06720	PF00664	ABC transporter transmembrane region
AM341_RS06725	PF01037	AsnC family
AM341_RS06725	PF13404	AsnC-type helix-turn-helix domain
AM341_RS06730	PF08282	haloacid dehalogenase-like hydrolase
AM341_RS06735	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS06735	PF12793	AM341_RS06735
AM341_RS06740	PF06508	Queuosine biosynthesis protein QueC
AM341_RS06745	PF13279	Thioesterase-like superfamily
AM341_RS06750	PF12836	Helix-hairpin-helix motif
AM341_RS06755	PF13145	PPIC-type PPIASE domain
AM341_RS06755	PF13624	SurA N-terminal domain
AM341_RS06760	PF00216	Bacterial DNA-binding protein
AM341_RS06765	PF00004	ATPase family associated with various cellular activities (AAA)
AM341_RS06765	PF02190	ATP-dependent protease La (LON) domain
AM341_RS06765	PF05362	Lon protease (S16) C-terminal proteolytic domain
AM341_RS06770	PF06689	ClpX C4-type zinc finger
AM341_RS06770	PF07724	AAA domain (Cdc48 subfamily)
AM341_RS06770	PF10431	C-terminal, D2-small domain, of ClpB protein
AM341_RS06775	PF00574	Clp protease
AM341_RS06780	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AM341_RS06780	PF05697	Bacterial trigger factor protein (TF)
AM341_RS06780	PF05698	Bacterial trigger factor protein (TF) C-terminus
AM341_RS06790	PF01722	BolA-like protein
AM341_RS06800	PF03923	AM341_RS06800
AM341_RS06800	PF08139	AM341_RS06800
AM341_RS06805	PF07690	Major Facilitator Superfamily
AM341_RS06810	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AM341_RS06810	PF06481	COX Aromatic Rich Motif
AM341_RS06815	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AM341_RS06820	PF00510	Cytochrome c oxidase subunit III
AM341_RS06825	PF03626	AM341_RS06825
AM341_RS06830	PF01040	UbiA prenyltransferase family
AM341_RS06835	PF07690	Major Facilitator Superfamily
AM341_RS06840	PF04461	Protein of unknown function (DUF520)
AM341_RS06845	PF02558	Ketopantoate reductase PanE/ApbA
AM341_RS06845	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AM341_RS06850	PF01965	DJ-1/PfpI family
AM341_RS06855	PF02568	Thiamine biosynthesis protein (ThiI)
AM341_RS06855	PF02926	THUMP domain
AM341_RS06860	PF02609	Exonuclease VII small subunit
AM341_RS06865	PF00348	Polyprenyl synthetase
AM341_RS06870	PF02779	Transketolase, pyrimidine binding domain
AM341_RS06870	PF02780	Transketolase, C-terminal domain
AM341_RS06870	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AM341_RS06875	PF00248	Aldo/keto reductase family
AM341_RS06880	PF04608	Phosphatidylglycerophosphatase A
AM341_RS06885	PF00586	AIR synthase related protein, N-terminal domain
AM341_RS06885	PF02769	AIR synthase related protein, C-terminal domain
AM341_RS06890	PF01029	NusB family
AM341_RS06895	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AM341_RS06900	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AM341_RS06900	PF01872	RibD C-terminal domain
AM341_RS06905	PF03477	ATP cone domain
AM341_RS06910	PF11622	Protein of unknown function (DUF3251)
AM341_RS06920	PF03502	Nucleoside-specific channel-forming protein, Tsx
AM341_RS06925	PF01844	HNH endonuclease
AM341_RS06930	PF02355	Protein export membrane protein
AM341_RS06930	PF07549	SecD/SecF GG Motif
AM341_RS06935	PF02355	Protein export membrane protein
AM341_RS06935	PF07549	SecD/SecF GG Motif
AM341_RS06935	PF13721	SecD export protein N-terminal TM region
AM341_RS06940	PF02699	Preprotein translocase subunit
AM341_RS06945	PF01702	Queuine tRNA-ribosyltransferase
AM341_RS06950	PF02547	Queuosine biosynthesis protein
AM341_RS06955	PF04336	AM341_RS06955
AM341_RS06960	PF00128	Alpha amylase, catalytic domain
AM341_RS06960	PF02903	Alpha amylase, N-terminal ig-like domain
AM341_RS06965	PF00324	Amino acid permease
AM341_RS06970	PF05525	AM341_RS06970
AM341_RS06975	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS06975	PF00989	PAS fold
AM341_RS06975	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS06975	PF11808	AM341_RS06975
AM341_RS06980	PF00072	Response regulator receiver domain
AM341_RS06980	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS06985	PF00149	Calcineurin-like phosphoesterase
AM341_RS06985	PF12320	Type 5 capsule protein repressor C-terminal domain
AM341_RS06990	PF13476	AAA domain
AM341_RS06990	PF13558	Putative exonuclease SbcCD, C subunit
AM341_RS06995	PF07690	Major Facilitator Superfamily
AM341_RS07000	PF00480	ROK family
AM341_RS07005	PF04381	Putative exonuclease, RdgC
AM341_RS07010	PF10971	AM341_RS07010
AM341_RS07020	PF06865	Protein of unknown function (DUF1255)
AM341_RS07025	PF07302	AM341_RS07025
AM341_RS07035	PF16362	AM341_RS07035
AM341_RS07040	PF01202	Shikimate kinase
AM341_RS07045	PF02639	AM341_RS07045
AM341_RS07050	PF03807	NADP oxidoreductase coenzyme F420-dependent
AM341_RS07050	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AM341_RS07055	PF00990	GGDEF domain
AM341_RS07055	PF05230	AM341_RS07055
AM341_RS07060	PF07769	AM341_RS07060
AM341_RS07065	PF00245	Alkaline phosphatase
AM341_RS07070	PF10796	AM341_RS07070
AM341_RS07080	PF01820	D-ala D-ala ligase N-terminus
AM341_RS07080	PF07478	D-ala D-ala ligase C-terminus
AM341_RS07085	PF10953	AM341_RS07085
AM341_RS07090	PF10954	AM341_RS07090
AM341_RS07095	PF07759	AM341_RS07095
AM341_RS07100	PF05992	AM341_RS07100
AM341_RS07110	PF00144	Beta-lactamase
AM341_RS07115	PF15977	AM341_RS07115
AM341_RS07120	PF03212	Pertactin
AM341_RS07120	PF03797	Autotransporter beta-domain
AM341_RS07130	PF00490	Delta-aminolevulinic acid dehydratase
AM341_RS07135	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
AM341_RS07140	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS07145	PF00005	ABC transporter
AM341_RS07150	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AM341_RS07170	PF02585	GlcNAc-PI de-N-acetylase
AM341_RS07175	PF00535	Glycosyl transferase family 2
AM341_RS07180	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS07190	PF02583	Metal-sensitive transcriptional repressor
AM341_RS07195	PF00107	Zinc-binding dehydrogenase
AM341_RS07195	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS07200	PF00756	Putative esterase
AM341_RS07205	PF09831	AM341_RS07205
AM341_RS07210	PF07690	Major Facilitator Superfamily
AM341_RS07215	PF00682	HMGL-like
AM341_RS07215	PF07836	DmpG-like communication domain
AM341_RS07220	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AM341_RS07220	PF09290	Prokaryotic acetaldehyde dehydrogenase, dimerisation
AM341_RS07225	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AM341_RS07230	PF12697	Alpha/beta hydrolase family
AM341_RS07235	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
AM341_RS07240	PF01494	FAD binding domain
AM341_RS07245	PF01614	Bacterial transcriptional regulator
AM341_RS07245	PF09339	IclR helix-turn-helix domain
AM341_RS07250	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS07250	PF13377	Periplasmic binding protein-like domain
AM341_RS07260	PF00703	Glycosyl hydrolases family 2
AM341_RS07260	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AM341_RS07260	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AM341_RS07260	PF02929	Beta galactosidase small chain
AM341_RS07260	PF16353	AM341_RS07260
AM341_RS07265	PF01306	LacY proton/sugar symporter
AM341_RS07270	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS07270	PF12464	Maltose acetyltransferase
AM341_RS07270	PF14602	Hexapeptide repeat of succinyl-transferase
AM341_RS07275	PF07690	Major Facilitator Superfamily
AM341_RS07280	PF02560	Cyanate lyase C-terminal domain
AM341_RS07285	PF00484	Carbonic anhydrase
AM341_RS07290	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS07290	PF03466	LysR substrate binding domain
AM341_RS07295	PF07969	Amidohydrolase family
AM341_RS07300	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AM341_RS07305	PF00501	AMP-binding enzyme
AM341_RS07305	PF13193	AMP-binding enzyme C-terminal domain
AM341_RS07305	PF16177	AM341_RS07305
AM341_RS07310	PF03972	MmgE/PrpD family
AM341_RS07315	PF00285	Citrate synthase
AM341_RS07320	PF13714	Phosphoenolpyruvate phosphomutase
AM341_RS07325	PF00158	Sigma-54 interaction domain
AM341_RS07325	PF02954	Bacterial regulatory protein, Fis family
AM341_RS07325	PF06506	Propionate catabolism activator
AM341_RS07330	PF07338	Protein of unknown function (DUF1471)
AM341_RS07335	PF01810	AM341_RS07335
AM341_RS07350	PF00107	Zinc-binding dehydrogenase
AM341_RS07350	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS07355	PF07969	Amidohydrolase family
AM341_RS07360	PF00696	Amino acid kinase family
AM341_RS07370	PF06545	Protein of unknown function (DUF1116)
AM341_RS07375	PF00549	CoA-ligase
AM341_RS07375	PF02629	CoA binding domain
AM341_RS07380	PF11392	AM341_RS07380
AM341_RS07385	PF12796	Ankyrin repeats (3 copies)
AM341_RS07385	PF13637	Ankyrin repeats (many copies)
AM341_RS07395	PF06496	AM341_RS07395
AM341_RS07400	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS07400	PF03466	LysR substrate binding domain
AM341_RS07405	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS07405	PF00563	EAL domain
AM341_RS07420	PF02028	BCCT family transporter
AM341_RS07430	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS07430	PF13977	Bacterial transcriptional repressor
AM341_RS07435	PF00171	Aldehyde dehydrogenase family
AM341_RS07440	PF00732	GMC oxidoreductase
AM341_RS07440	PF05199	GMC oxidoreductase
AM341_RS07460	PF02589	Uncharacterised ACR, YkgG family COG1556
AM341_RS07465	PF02589	Uncharacterised ACR, YkgG family COG1556
AM341_RS07465	PF11870	AM341_RS07465
AM341_RS07465	PF13183	4Fe-4S dicluster domain
AM341_RS07470	PF02754	AM341_RS07470
AM341_RS07475	PF12833	Helix-turn-helix domain
AM341_RS07475	PF12852	Cupin
AM341_RS07480	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AM341_RS07480	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS07485	PF07338	Protein of unknown function (DUF1471)
AM341_RS07490	PF04224	AM341_RS07490
AM341_RS07495	PF06445	GyrI-like small molecule binding domain
AM341_RS07495	PF12833	Helix-turn-helix domain
AM341_RS07505	PF13737	AM341_RS07505
AM341_RS07510	PF02369	Bacterial Ig-like domain (group 1)
AM341_RS07510	PF09134	Invasin, domain 3
AM341_RS07510	PF11924	Protein of unknown function (DUF3442)
AM341_RS07530	PF01197	Ribosomal protein L31
AM341_RS07535	PF00444	Ribosomal protein L36
AM341_RS07550	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS07555	PF16449	AM341_RS07555
AM341_RS07565	PF15976	AM341_RS07565
AM341_RS07565	PF16967	AM341_RS07565
AM341_RS07580	PF03692	AM341_RS07580
AM341_RS07590	PF07274	AM341_RS07590
AM341_RS07600	PF00111	2Fe-2S iron-sulfur cluster binding domain
AM341_RS07600	PF01799	[2Fe-2S] binding domain
AM341_RS07605	PF00941	FAD binding domain in molybdopterin dehydrogenase
AM341_RS07605	PF03450	CO dehydrogenase flavoprotein C-terminal domain
AM341_RS07610	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM341_RS07610	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
AM341_RS07615	PF02625	XdhC and CoxI family
AM341_RS07615	PF13478	XdhC Rossmann domain
AM341_RS07620	PF03466	LysR substrate binding domain
AM341_RS07625	PF06755	AM341_RS07625
AM341_RS07630	PF06154	YagB/YeeU/YfjZ family
AM341_RS07640	PF06174	AM341_RS07640
AM341_RS07645	PF04002	RadC-like JAB domain
AM341_RS07650	PF03230	Antirestriction protein
AM341_RS07660	PF06067	AM341_RS07660
AM341_RS07685	PF01926	50S ribosome-binding GTPase
AM341_RS07690	PF11185	AM341_RS07690
AM341_RS07695	PF00583	Acetyltransferase (GNAT) family
AM341_RS07745	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AM341_RS07770	PF05321	Haemolysin expression modulating protein
AM341_RS07775	PF11726	AM341_RS07775
AM341_RS07780	PF01527	Transposase
AM341_RS07785	PF05717	AM341_RS07785
AM341_RS07790	PF03050	AM341_RS07790
AM341_RS07790	PF13005	AM341_RS07790
AM341_RS07790	PF13007	AM341_RS07790
AM341_RS07790	PF13817	AM341_RS07790
AM341_RS07800	PF11682	AM341_RS07800
AM341_RS07815	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AM341_RS07815	PF08388	AM341_RS07815
AM341_RS07835	PF07883	Cupin domain
AM341_RS07840	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS07840	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS07845	PF04198	Putative sugar-binding domain
AM341_RS07850	PF00005	ABC transporter
AM341_RS07855	PF02653	AM341_RS07855
AM341_RS07860	PF02653	AM341_RS07860
AM341_RS07865	PF13407	Periplasmic binding protein domain
AM341_RS07870	PF01791	DeoC/LacD family aldolase
AM341_RS07875	PF03992	Antibiotic biosynthesis monooxygenase
AM341_RS07880	PF00834	Ribulose-phosphate 3 epimerase family
AM341_RS07890	PF09857	AM341_RS07890
AM341_RS07930	PF02384	N-6 DNA Methylase
AM341_RS07935	PF00589	Phage integrase family
AM341_RS07935	PF13356	Domain of unknown function (DUF4102)
AM341_RS07945	PF00171	Aldehyde dehydrogenase family
AM341_RS07950	PF00696	Amino acid kinase family
AM341_RS07950	PF01472	PUA domain
AM341_RS07955	PF00267	Gram-negative porin
AM341_RS07960	PF07417	Transcriptional regulator Crl
AM341_RS07965	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
AM341_RS07970	PF00156	Phosphoribosyl transferase domain
AM341_RS07975	PF01546	Peptidase family M20/M25/M40
AM341_RS07975	PF07687	Peptidase dimerisation domain
AM341_RS07980	PF00472	RF-1 domain
AM341_RS07995	PF13673	Acetyltransferase (GNAT) domain
AM341_RS08000	PF13957	AM341_RS08000
AM341_RS08005	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AM341_RS08010	PF00817	impB/mucB/samB family
AM341_RS08010	PF11798	IMS family HHH motif
AM341_RS08010	PF11799	impB/mucB/samB family C-terminal domain
AM341_RS08015	PF00691	OmpA family
AM341_RS08020	PF00771	FHIPEP family
AM341_RS08030	PF00877	NlpC/P60 family
AM341_RS08035	PF04221	RelB antitoxin
AM341_RS08040	PF15738	AM341_RS08040
AM341_RS08045	PF03734	L,D-transpeptidase catalytic domain
AM341_RS08050	PF13230	Glutamine amidotransferases class-II
AM341_RS08055	PF13580	SIS domain
AM341_RS08060	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AM341_RS08060	PF02770	Acyl-CoA dehydrogenase, middle domain
AM341_RS08060	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AM341_RS08060	PF09317	AM341_RS08060
AM341_RS08065	PF08816	Inhibitor of vertebrate lysozyme (Ivy)
AM341_RS08070	PF00795	Carbon-nitrogen hydrolase
AM341_RS08075	PF01609	Transposase DDE domain
AM341_RS08075	PF13808	AM341_RS08075
AM341_RS08085	PF03527	AM341_RS08085
AM341_RS08085	PF05593	AM341_RS08085
AM341_RS08090	PF05954	Phage late control gene D protein (GPD)
AM341_RS08100	PF05638	Protein of unknown function (DUF796)
AM341_RS08105	PF05591	AM341_RS08105
AM341_RS08115	PF05943	AM341_RS08115
AM341_RS08120	PF04965	Gene 25-like lysozyme
AM341_RS08125	PF05947	AM341_RS08125
AM341_RS08130	PF06996	AM341_RS08130
AM341_RS08140	PF12790	Type VI secretion lipoprotein
AM341_RS08145	PF05936	AM341_RS08145
AM341_RS08150	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
AM341_RS08155	PF00004	ATPase family associated with various cellular activities (AAA)
AM341_RS08155	PF07724	AAA domain (Cdc48 subfamily)
AM341_RS08155	PF10431	C-terminal, D2-small domain, of ClpB protein
AM341_RS08160	PF11319	AM341_RS08160
AM341_RS08165	PF16989	AM341_RS08165
AM341_RS08170	PF06744	AM341_RS08170
AM341_RS08170	PF06761	AM341_RS08170
AM341_RS08170	PF14331	AM341_RS08170
AM341_RS08175	PF06812	AM341_RS08175
AM341_RS08175	PF12486	AM341_RS08175
AM341_RS08180	PF05638	Protein of unknown function (DUF796)
AM341_RS08210	PF00929	Exonuclease
AM341_RS08215	PF00075	RNase H
AM341_RS08220	PF08241	Methyltransferase domain
AM341_RS08225	PF00753	Metallo-beta-lactamase superfamily
AM341_RS08225	PF16123	AM341_RS08225
AM341_RS08230	PF01464	Transglycosylase SLT domain
AM341_RS08230	PF01476	LysM domain
AM341_RS08235	PF08241	Methyltransferase domain
AM341_RS08240	PF03372	Endonuclease/Exonuclease/phosphatase family
AM341_RS08245	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS08245	PF03466	LysR substrate binding domain
AM341_RS08250	PF00248	Aldo/keto reductase family
AM341_RS08285	PF13242	HAD-hyrolase-like
AM341_RS08290	PF00005	ABC transporter
AM341_RS08290	PF09383	NIL domain
AM341_RS08295	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS08300	PF03180	NLPA lipoprotein
AM341_RS08305	PF16358	AM341_RS08305
AM341_RS08310	PF01980	Uncharacterised protein family UPF0066
AM341_RS08315	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AM341_RS08315	PF03129	Anticodon binding domain
AM341_RS08315	PF04073	Aminoacyl-tRNA editing domain
AM341_RS08320	PF05708	Orthopoxvirus protein of unknown function (DUF830)
AM341_RS08325	PF04170	NlpE N-terminal domain
AM341_RS08325	PF17185	AM341_RS08325
AM341_RS08330	PF00472	RF-1 domain
AM341_RS08335	PF07152	YaeQ protein
AM341_RS08340	PF06786	AM341_RS08340
AM341_RS08345	PF07073	Modulator of Rho-dependent transcription termination (ROF)
AM341_RS08350	PF01171	PP-loop family
AM341_RS08350	PF09179	TilS substrate binding domain
AM341_RS08350	PF11734	TilS substrate C-terminal domain
AM341_RS08355	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AM341_RS08360	PF01276	Orn/Lys/Arg decarboxylase, major domain
AM341_RS08360	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AM341_RS08360	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AM341_RS08365	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AM341_RS08370	PF01336	OB-fold nucleic acid binding domain
AM341_RS08370	PF02811	PHP domain
AM341_RS08370	PF07733	Bacterial DNA polymerase III alpha subunit
AM341_RS08370	PF14579	Helix-hairpin-helix motif
AM341_RS08375	PF01351	Ribonuclease HII
AM341_RS08380	PF02684	AM341_RS08380
AM341_RS08385	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS08385	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AM341_RS08390	PF07977	FabA-like domain
AM341_RS08395	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS08395	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
AM341_RS08395	PF14602	Hexapeptide repeat of succinyl-transferase
AM341_RS08400	PF03938	Outer membrane protein (OmpH-like)
AM341_RS08405	PF01103	Surface antigen
AM341_RS08405	PF07244	Surface antigen variable number repeat
AM341_RS08410	PF00595	PDZ domain (Also known as DHR or GLGF)
AM341_RS08410	PF02163	Peptidase family M50
AM341_RS08415	PF01148	Cytidylyltransferase family
AM341_RS08420	PF01255	Putative undecaprenyl diphosphate synthase
AM341_RS08425	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AM341_RS08425	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
AM341_RS08425	PF13288	DXP reductoisomerase C-terminal domain
AM341_RS08430	PF01765	Ribosome recycling factor
AM341_RS08435	PF00696	Amino acid kinase family
AM341_RS08440	PF00889	Elongation factor TS
AM341_RS08450	PF00318	Ribosomal protein S2
AM341_RS08460	PF00557	Metallopeptidase family M24
AM341_RS08465	PF01842	ACT domain
AM341_RS08465	PF01909	Nucleotidyltransferase domain
AM341_RS08465	PF01966	HD domain
AM341_RS08465	PF08335	GlnD PII-uridylyltransferase
AM341_RS08470	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS08470	PF14602	Hexapeptide repeat of succinyl-transferase
AM341_RS08470	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
AM341_RS08475	PF00149	Calcineurin-like phosphoesterase
AM341_RS08480	PF11944	AM341_RS08480
AM341_RS08485	PF05651	AM341_RS08485
AM341_RS08485	PF13556	PucR C-terminal helix-turn-helix domain
AM341_RS08490	PF00595	PDZ domain (Also known as DHR or GLGF)
AM341_RS08490	PF13365	Trypsin-like peptidase domain
AM341_RS08500	PF01966	HD domain
AM341_RS08505	PF01048	Phosphorylase superfamily
AM341_RS08510	PF01497	Periplasmic binding protein
AM341_RS08515	PF03458	AM341_RS08515
AM341_RS08520	PF01521	Iron-sulphur cluster biosynthesis
AM341_RS08525	PF00654	Voltage gated chloride channel
AM341_RS08530	PF00202	Aminotransferase class-III
AM341_RS08535	PF01032	FecCD transport family
AM341_RS08540	PF01497	Periplasmic binding protein
AM341_RS08545	PF00005	ABC transporter
AM341_RS08550	PF00593	TonB dependent receptor
AM341_RS08550	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS08555	PF00905	Penicillin binding protein transpeptidase domain
AM341_RS08555	PF00912	Transglycosylase
AM341_RS08555	PF14812	AM341_RS08555
AM341_RS08555	PF14814	Bifunctional transglycosylase second domain
AM341_RS08565	PF00270	DEAD/DEAH box helicase
AM341_RS08565	PF00271	Helicase conserved C-terminal domain
AM341_RS08565	PF04408	Helicase associated domain (HA2)
AM341_RS08565	PF08482	AM341_RS08565
AM341_RS08570	PF02834	LigT like Phosphoesterase
AM341_RS08575	PF03749	Sugar fermentation stimulation protein
AM341_RS08580	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AM341_RS08585	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AM341_RS08590	PF01743	Poly A polymerase head domain
AM341_RS08590	PF12626	Polymerase A arginine-rich C-terminus
AM341_RS08590	PF12627	Probable RNA and SrmB- binding site of polymerase A
AM341_RS08595	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AM341_RS08600	PF00419	Fimbrial protein
AM341_RS08605	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS08605	PF02753	Pili assembly chaperone PapD, C-terminal domain
AM341_RS08610	PF00577	Outer membrane usher protein
AM341_RS08610	PF13953	PapC C-terminal domain
AM341_RS08610	PF13954	PapC N-terminal domain
AM341_RS08615	PF00419	Fimbrial protein
AM341_RS08620	PF00419	Fimbrial protein
AM341_RS08625	PF00419	Fimbrial protein
AM341_RS08630	PF00419	Fimbrial protein
AM341_RS08635	PF02548	Ketopantoate hydroxymethyltransferase
AM341_RS08640	PF02569	Pantoate-beta-alanine ligase
AM341_RS08645	PF04754	AM341_RS08645
AM341_RS08660	PF02261	Aspartate decarboxylase
AM341_RS08665	PF01522	Polysaccharide deacetylase
AM341_RS08670	PF03610	PTS system fructose IIA component
AM341_RS08675	PF01061	AM341_RS08675
AM341_RS08680	PF00005	ABC transporter
AM341_RS08685	PF00484	Carbonic anhydrase
AM341_RS08690	PF00156	Phosphoribosyl transferase domain
AM341_RS08695	PF01011	PQQ enzyme repeat
AM341_RS08700	PF00394	Multicopper oxidase
AM341_RS08700	PF07731	Multicopper oxidase
AM341_RS08700	PF07732	Multicopper oxidase
AM341_RS08705	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
AM341_RS08710	PF01564	Spermine/spermidine synthase
AM341_RS08710	PF17284	AM341_RS08710
AM341_RS08715	PF02675	S-adenosylmethionine decarboxylase
AM341_RS08720	PF06062	AM341_RS08720
AM341_RS08725	PF00330	Aconitase family (aconitate hydratase)
AM341_RS08725	PF06434	Aconitate hydratase 2 N-terminus
AM341_RS08725	PF11791	Aconitate B N-terminal domain
AM341_RS08735	PF11737	AM341_RS08735
AM341_RS08740	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AM341_RS08740	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS08745	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AM341_RS08745	PF00364	Biotin-requiring enzyme
AM341_RS08745	PF02817	e3 binding domain
AM341_RS08750	PF00456	Transketolase, thiamine diphosphate binding domain
AM341_RS08760	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS08760	PF07729	FCD domain
AM341_RS08765	PF00324	Amino acid permease
AM341_RS08770	PF17113	AM341_RS08770
AM341_RS08775	PF01510	N-acetylmuramoyl-L-alanine amidase
AM341_RS08780	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AM341_RS08780	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AM341_RS08790	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS08795	PF00437	Type II/IV secretion system protein
AM341_RS08795	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AM341_RS08800	PF00482	Type II secretion system (T2SS), protein F
AM341_RS08805	PF00478	IMP dehydrogenase / GMP reductase domain
AM341_RS08810	PF01121	Dephospho-CoA kinase
AM341_RS08815	PF07072	Protein of unknown function (DUF1342)
AM341_RS08820	PF03884	Domain of unknown function (DUF329)
AM341_RS08825	PF00293	NUDIX domain
AM341_RS08830	PF01043	SecA preprotein cross-linking domain
AM341_RS08830	PF02810	SEC-C motif
AM341_RS08830	PF07516	SecA Wing and Scaffold domain
AM341_RS08830	PF07517	SecA DEAD-like domain
AM341_RS08835	PF06558	AM341_RS08835
AM341_RS08840	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AM341_RS08845	PF00091	Tubulin/FtsZ family, GTPase domain
AM341_RS08845	PF12327	FtsZ family, C-terminal domain
AM341_RS08850	PF02491	SHS2 domain inserted in FTSA
AM341_RS08850	PF14450	Cell division protein FtsA
AM341_RS08855	PF03799	Cell division protein FtsQ
AM341_RS08855	PF08478	POTRA domain, FtsQ-type
AM341_RS08860	PF01820	D-ala D-ala ligase N-terminus
AM341_RS08860	PF07478	D-ala D-ala ligase C-terminus
AM341_RS08865	PF01225	Mur ligase family, catalytic domain
AM341_RS08865	PF02875	Mur ligase family, glutamate ligase domain
AM341_RS08865	PF08245	Mur ligase middle domain
AM341_RS08870	PF03033	Glycosyltransferase family 28 N-terminal domain
AM341_RS08870	PF04101	Glycosyltransferase family 28 C-terminal domain
AM341_RS08875	PF01098	AM341_RS08875
AM341_RS08880	PF02875	Mur ligase family, glutamate ligase domain
AM341_RS08880	PF08245	Mur ligase middle domain
AM341_RS08885	PF00953	Glycosyl transferase family 4
AM341_RS08885	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
AM341_RS08890	PF01225	Mur ligase family, catalytic domain
AM341_RS08890	PF02875	Mur ligase family, glutamate ligase domain
AM341_RS08890	PF08245	Mur ligase middle domain
AM341_RS08895	PF01225	Mur ligase family, catalytic domain
AM341_RS08895	PF02875	Mur ligase family, glutamate ligase domain
AM341_RS08895	PF08245	Mur ligase middle domain
AM341_RS08900	PF00905	Penicillin binding protein transpeptidase domain
AM341_RS08900	PF03717	Penicillin-binding Protein dimerisation domain
AM341_RS08905	PF04999	AM341_RS08905
AM341_RS08910	PF01795	MraW methylase family
AM341_RS08915	PF02381	MraZ protein
AM341_RS08925	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS08925	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AM341_RS08935	PF10369	Small subunit of acetolactate synthase
AM341_RS08935	PF13710	ACT domain
AM341_RS08940	PF00205	Thiamine pyrophosphate enzyme, central domain
AM341_RS08940	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AM341_RS08940	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AM341_RS08945	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS08945	PF03466	LysR substrate binding domain
AM341_RS08950	PF08054	AM341_RS08950
AM341_RS08955	PF00682	HMGL-like
AM341_RS08955	PF08502	LeuA allosteric (dimerisation) domain
AM341_RS08960	PF00180	Isocitrate/isopropylmalate dehydrogenase
AM341_RS08965	PF00330	Aconitase family (aconitate hydratase)
AM341_RS08970	PF00694	Aconitase C-terminal domain
AM341_RS08975	PF07690	Major Facilitator Superfamily
AM341_RS08980	PF15894	AM341_RS08980
AM341_RS08985	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS08985	PF12793	AM341_RS08985
AM341_RS08990	PF13343	Bacterial extracellular solute-binding protein
AM341_RS08995	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS09000	PF00005	ABC transporter
AM341_RS09005	PF09335	AM341_RS09005
AM341_RS09010	PF02311	AraC-like ligand binding domain
AM341_RS09010	PF12833	Helix-turn-helix domain
AM341_RS09020	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS09025	PF02610	L-arabinose isomerase
AM341_RS09025	PF11762	L-arabinose isomerase C-terminal domain
AM341_RS09030	PF00596	Class II Aldolase and Adducin N-terminal domain
AM341_RS09035	PF00136	DNA polymerase family B
AM341_RS09035	PF03104	DNA polymerase family B, exonuclease domain
AM341_RS09040	PF00176	SNF2 family N-terminal domain
AM341_RS09040	PF00271	Helicase conserved C-terminal domain
AM341_RS09040	PF12137	RNA polymerase recycling family C-terminal
AM341_RS09045	PF00849	RNA pseudouridylate synthase
AM341_RS09060	PF00226	DnaJ domain
AM341_RS09060	PF05099	Tellurite resistance protein TerB
AM341_RS09065	PF03968	OstA-like protein
AM341_RS09065	PF04453	Organic solvent tolerance protein
AM341_RS09070	PF00639	PPIC-type PPIASE domain
AM341_RS09070	PF09312	SurA N-terminal domain
AM341_RS09070	PF13616	PPIC-type PPIASE domain
AM341_RS09075	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AM341_RS09080	PF00398	Ribosomal RNA adenine dimethylase
AM341_RS09085	PF04379	Protein of unknown function (DUF525)
AM341_RS09090	PF00149	Calcineurin-like phosphoesterase
AM341_RS09095	PF00186	Dihydrofolate reductase
AM341_RS09100	PF00999	Sodium/hydrogen exchanger family
AM341_RS09100	PF02254	TrkA-N domain
AM341_RS09105	PF02525	Flavodoxin-like fold
AM341_RS09110	PF00083	Sugar (and other) transporter
AM341_RS09120	PF01494	FAD binding domain
AM341_RS09125	PF00766	Electron transfer flavoprotein FAD-binding domain
AM341_RS09125	PF01012	Electron transfer flavoprotein domain
AM341_RS09130	PF01012	Electron transfer flavoprotein domain
AM341_RS09135	PF02028	BCCT family transporter
AM341_RS09140	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AM341_RS09140	PF02770	Acyl-CoA dehydrogenase, middle domain
AM341_RS09140	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AM341_RS09145	PF02515	CoA-transferase family III
AM341_RS09150	PF00501	AMP-binding enzyme
AM341_RS09150	PF13193	AMP-binding enzyme C-terminal domain
AM341_RS09155	PF00378	Enoyl-CoA hydratase/isomerase family
AM341_RS09160	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS09165	PF07180	Protein of unknown function (DUF1401)
AM341_RS09175	PF02142	MGS-like domain
AM341_RS09175	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AM341_RS09175	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AM341_RS09180	PF00117	Glutamine amidotransferase class-I
AM341_RS09180	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AM341_RS09190	PF01113	Dihydrodipicolinate reductase, N-terminus
AM341_RS09190	PF05173	Dihydrodipicolinate reductase, C-terminus
AM341_RS09195	PF01156	Inosine-uridine preferring nucleoside hydrolase
AM341_RS09200	PF02401	LytB protein
AM341_RS09205	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AM341_RS09210	PF01252	AM341_RS09210
AM341_RS09215	PF00133	tRNA synthetases class I (I, L, M and V)
AM341_RS09215	PF06827	Zinc finger found in FPG and IleRS
AM341_RS09215	PF08264	Anticodon-binding domain of tRNA
AM341_RS09220	PF01687	Riboflavin kinase
AM341_RS09220	PF06574	FAD synthetase
AM341_RS09225	PF10837	AM341_RS09225
AM341_RS09230	PF01649	Ribosomal protein S20
AM341_RS09250	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS09250	PF03466	LysR substrate binding domain
AM341_RS09255	PF06965	Na+/H+ antiporter 1
AM341_RS09265	PF01848	AM341_RS09265
AM341_RS09270	PF01609	Transposase DDE domain
AM341_RS09280	PF00226	DnaJ domain
AM341_RS09280	PF00684	DnaJ central domain
AM341_RS09280	PF01556	DnaJ C terminal domain
AM341_RS09285	PF00012	Hsp70 protein
AM341_RS09290	PF10807	AM341_RS09290
AM341_RS09295	PF03981	AM341_RS09295
AM341_RS09295	PF13099	AM341_RS09295
AM341_RS09300	PF01184	AM341_RS09300
AM341_RS09305	PF00994	Probable molybdopterin binding domain
AM341_RS09310	PF00923	Transaldolase
AM341_RS09315	PF01235	AM341_RS09315
AM341_RS09320	PF03883	AM341_RS09320
AM341_RS09325	PF10697	AM341_RS09325
AM341_RS09330	PF00291	Pyridoxal-phosphate dependent enzyme
AM341_RS09330	PF14821	Threonine synthase N terminus
AM341_RS09335	PF00288	GHMP kinases N terminal domain
AM341_RS09335	PF08544	GHMP kinases C terminal
AM341_RS09340	PF00696	Amino acid kinase family
AM341_RS09340	PF00742	Homoserine dehydrogenase
AM341_RS09340	PF01842	ACT domain
AM341_RS09340	PF03447	Homoserine dehydrogenase, NAD binding domain
AM341_RS09340	PF13840	ACT domain
AM341_RS09345	PF08254	AM341_RS09345
AM341_RS09350	PF00588	SpoU rRNA Methylase family
AM341_RS09360	PF00072	Response regulator receiver domain
AM341_RS09360	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS09365	PF06123	AM341_RS09365
AM341_RS09370	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS09370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS09375	PF00072	Response regulator receiver domain
AM341_RS09375	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS09380	PF05981	AM341_RS09380
AM341_RS09385	PF06445	GyrI-like small molecule binding domain
AM341_RS09385	PF12833	Helix-turn-helix domain
AM341_RS09390	PF00300	Histidine phosphatase superfamily (branch 1)
AM341_RS09395	PF01931	Protein of unknown function DUF84
AM341_RS09400	PF01371	Trp repressor protein
AM341_RS09405	PF01464	Transglycosylase SLT domain
AM341_RS09405	PF14718	Soluble lytic murein transglycosylase L domain
AM341_RS09415	PF00005	ABC transporter
AM341_RS09415	PF12848	ABC transporter
AM341_RS09420	PF01381	Helix-turn-helix
AM341_RS09420	PF13521	AAA domain
AM341_RS09425	PF13481	AAA domain
AM341_RS09425	PF13541	Subunit ChlI of Mg-chelatase
AM341_RS09430	PF12710	haloacid dehalogenase-like hydrolase
AM341_RS09435	PF10144	AM341_RS09435
AM341_RS09440	PF03099	Biotin/lipoate A/B protein ligase family
AM341_RS09440	PF10437	Bacterial lipoate protein ligase C-terminus
AM341_RS09445	PF01048	Phosphorylase superfamily
AM341_RS09450	PF01676	Metalloenzyme superfamily
AM341_RS09455	PF00591	Glycosyl transferase family, a/b domain
AM341_RS09455	PF02885	Glycosyl transferase family, helical bundle domain
AM341_RS09455	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
AM341_RS09460	PF01791	DeoC/LacD family aldolase
AM341_RS09465	PF11230	AM341_RS09465
AM341_RS09470	PF04055	Radical SAM superfamily
AM341_RS09470	PF13353	4Fe-4S single cluster domain
AM341_RS09475	PF01026	TatD related DNase
AM341_RS09480	PF01734	Patatin-like phospholipase
AM341_RS09485	PF07043	AM341_RS09485
AM341_RS09490	PF04972	BON domain
AM341_RS09495	PF00009	Elongation factor Tu GTP binding domain
AM341_RS09495	PF03144	Elongation factor Tu domain 2
AM341_RS09495	PF16658	AM341_RS09495
AM341_RS09500	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS09505	PF00583	Acetyltransferase (GNAT) family
AM341_RS09510	PF03603	DNA polymerase III psi subunit
AM341_RS09515	PF05175	Methyltransferase small domain
AM341_RS09515	PF08468	Methyltransferase small domain N-terminal
AM341_RS09535	PF07256	AM341_RS09535
AM341_RS09540	PF06276	Ferric iron reductase FhuF-like transporter
AM341_RS09540	PF11575	AM341_RS09540
AM341_RS09545	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS09550	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS09555	PF06738	AM341_RS09555
AM341_RS09560	PF12821	AM341_RS09560
AM341_RS09570	PF01695	IstB-like ATP binding protein
AM341_RS09575	PF10696	AM341_RS09575
AM341_RS09580	PF00884	Sulfatase
AM341_RS09585	PF00107	Zinc-binding dehydrogenase
AM341_RS09585	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS09590	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS09590	PF07729	FCD domain
AM341_RS09595	PF07690	Major Facilitator Superfamily
AM341_RS09600	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AM341_RS09600	PF00672	HAMP domain
AM341_RS09600	PF02203	Tar ligand binding domain homologue
AM341_RS09610	PF02554	AM341_RS09610
AM341_RS09610	PF13722	AM341_RS09610
AM341_RS09615	PF04328	AM341_RS09615
AM341_RS09620	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AM341_RS09620	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AM341_RS09625	PF14384	AM341_RS09625
AM341_RS09630	PF04365	Protein of unknown function (DUF497)
AM341_RS09640	PF07690	Major Facilitator Superfamily
AM341_RS09645	PF04286	AM341_RS09645
AM341_RS09650	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component
AM341_RS09655	PF01869	BadF/BadG/BcrA/BcrD ATPase family
AM341_RS09660	PF11823	AM341_RS09660
AM341_RS09665	PF06977	SdiA-regulated
AM341_RS09670	PF06779	AM341_RS09670
AM341_RS09675	PF01885	RNA 2'-phosphotransferase, Tpt1 / KptA family
AM341_RS09680	PF07670	Nucleoside recognition
AM341_RS09685	PF07670	Nucleoside recognition
AM341_RS09690	PF01979	Amidohydrolase family
AM341_RS09695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS09695	PF03466	LysR substrate binding domain
AM341_RS09700	PF04965	Gene 25-like lysozyme
AM341_RS09715	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS09715	PF07729	FCD domain
AM341_RS09725	PF01232	Mannitol dehydrogenase Rossmann domain
AM341_RS09725	PF08125	Mannitol dehydrogenase C-terminal domain
AM341_RS09730	PF03786	D-mannonate dehydratase (UxuA)
AM341_RS09740	PF02447	AM341_RS09740
AM341_RS09765	PF06178	Oligogalacturonate-specific porin protein (KdgM)
AM341_RS09770	PF01344	Kelch motif
AM341_RS09775	PF03629	Domain of unknown function (DUF303)
AM341_RS09790	PF01527	Transposase
AM341_RS09795	PF05717	AM341_RS09795
AM341_RS09800	PF03050	AM341_RS09800
AM341_RS09800	PF13005	AM341_RS09800
AM341_RS09800	PF13007	AM341_RS09800
AM341_RS09800	PF13817	AM341_RS09800
AM341_RS09810	PF13449	Esterase-like activity of phytase
AM341_RS09825	PF10798	Biofilm development protein YmgB/AriR
AM341_RS09850	PF04542	Sigma-70 region 2
AM341_RS09850	PF08281	Sigma-70, region 4
AM341_RS09855	PF04773	FecR protein
AM341_RS09855	PF16220	AM341_RS09855
AM341_RS09855	PF16344	AM341_RS09855
AM341_RS09860	PF00593	TonB dependent receptor
AM341_RS09860	PF07660	Secretin and TonB N terminus short domain
AM341_RS09860	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS09865	PF01497	Periplasmic binding protein
AM341_RS09870	PF01032	FecCD transport family
AM341_RS09875	PF01032	FecCD transport family
AM341_RS09880	PF00005	ABC transporter
AM341_RS09895	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AM341_RS09895	PF08388	AM341_RS09895
AM341_RS09910	PF01522	Polysaccharide deacetylase
AM341_RS09915	PF00534	Glycosyl transferases group 1
AM341_RS09915	PF13439	Glycosyltransferase Family 4
AM341_RS09920	PF04393	AM341_RS09920
AM341_RS09925	PF03279	AM341_RS09925
AM341_RS09930	PF00665	Integrase core domain
AM341_RS09930	PF01527	Transposase
AM341_RS09930	PF13276	AM341_RS09930
AM341_RS09935	PF02028	BCCT family transporter
AM341_RS09945	PF10011	Predicted membrane protein (DUF2254)
AM341_RS09955	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS09955	PF02178	AT hook motif
AM341_RS09960	PF01695	IstB-like ATP binding protein
AM341_RS09975	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AM341_RS09975	PF08388	AM341_RS09975
AM341_RS09990	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AM341_RS10000	PF04606	AM341_RS10000
AM341_RS10005	PF07455	Phage polarity suppression protein (Psu)
AM341_RS10020	PF06048	AM341_RS10020
AM341_RS10020	PF08273	Zinc-binding domain of primase-helicase
AM341_RS10020	PF13362	Toprim domain
AM341_RS10025	PF17345	AM341_RS10025
AM341_RS10040	PF10554	AM341_RS10040
AM341_RS10045	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AM341_RS10055	PF00589	Phage integrase family
AM341_RS10055	PF13356	Domain of unknown function (DUF4102)
AM341_RS10065	PF00107	Zinc-binding dehydrogenase
AM341_RS10065	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS10070	PF05872	AM341_RS10070
AM341_RS10075	PF03739	AM341_RS10075
AM341_RS10080	PF03739	AM341_RS10080
AM341_RS10085	PF00883	Cytosol aminopeptidase family, catalytic domain
AM341_RS10085	PF02789	Cytosol aminopeptidase family, N-terminal domain
AM341_RS10090	PF04364	DNA polymerase III chi subunit, HolC
AM341_RS10095	PF00133	tRNA synthetases class I (I, L, M and V)
AM341_RS10095	PF08264	Anticodon-binding domain of tRNA
AM341_RS10095	PF10458	Valyl tRNA synthetase tRNA binding arm
AM341_RS10100	PF05987	AM341_RS10100
AM341_RS10105	PF00583	Acetyltransferase (GNAT) family
AM341_RS10110	PF06877	Regulator of ribonuclease activity B
AM341_RS10115	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AM341_RS10115	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AM341_RS10125	PF04074	Domain of unknown function (DUF386)
AM341_RS10130	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS10135	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS10140	PF01042	Endoribonuclease L-PSP
AM341_RS10150	PF08052	AM341_RS10150
AM341_RS10155	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AM341_RS10155	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AM341_RS10160	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
AM341_RS10160	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
AM341_RS10165	PF01042	Endoribonuclease L-PSP
AM341_RS10170	PF00122	E1-E2 ATPase
AM341_RS10170	PF00689	Cation transporting ATPase, C-terminus
AM341_RS10170	PF00690	Cation transporter/ATPase, N-terminus
AM341_RS10170	PF00702	haloacid dehalogenase-like hydrolase
AM341_RS10175	PF17059	AM341_RS10175
AM341_RS10180	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS10180	PF13377	Periplasmic binding protein-like domain
AM341_RS10185	PF00367	phosphotransferase system, EIIB
AM341_RS10185	PF02378	Phosphotransferase system, EIIC
AM341_RS10190	PF00128	Alpha amylase, catalytic domain
AM341_RS10190	PF11941	Domain of unknown function (DUF3459)
AM341_RS10195	PF03477	ATP cone domain
AM341_RS10195	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AM341_RS10200	PF13353	4Fe-4S single cluster domain
AM341_RS10205	PF07361	Cytochrome b562
AM341_RS10210	PF01523	Putative modulator of DNA gyrase
AM341_RS10215	PF04751	Protein of unknown function (DUF615)
AM341_RS10220	PF01225	Mur ligase family, catalytic domain
AM341_RS10220	PF02875	Mur ligase family, glutamate ligase domain
AM341_RS10220	PF08245	Mur ligase middle domain
AM341_RS10225	PF00316	Fructose-1-6-bisphosphatase
AM341_RS10230	PF02653	AM341_RS10230
AM341_RS10235	PF02653	AM341_RS10235
AM341_RS10240	PF00005	ABC transporter
AM341_RS10245	PF13407	Periplasmic binding protein domain
AM341_RS10250	PF00719	Inorganic pyrophosphatase
AM341_RS10255	PF02452	PemK-like protein
AM341_RS10260	PF04014	Antidote-toxin recognition MazE
AM341_RS10265	PF06094	AIG2-like family
AM341_RS10270	PF04357	AM341_RS10270
AM341_RS10275	PF01103	Surface antigen
AM341_RS10275	PF07244	Surface antigen variable number repeat
AM341_RS10275	PF17243	AM341_RS10275
AM341_RS10285	PF01625	Peptide methionine sulfoxide reductase
AM341_RS10290	PF00571	CBS domain
AM341_RS10290	PF01595	AM341_RS10290
AM341_RS10290	PF03471	Transporter associated domain
AM341_RS10295	PF06526	Protein of unknown function (DUF1107)
AM341_RS10300	PF09695	AM341_RS10300
AM341_RS10315	PF00459	Inositol monophosphatase family
AM341_RS10320	PF00149	Calcineurin-like phosphoesterase
AM341_RS10320	PF02872	5'-nucleotidase, C-terminal domain
AM341_RS10325	PF01638	HxlR-like helix-turn-helix
AM341_RS10330	PF05368	NmrA-like family
AM341_RS10335	PF00892	EamA-like transporter family
AM341_RS10340	PF01814	Hemerythrin HHE cation binding domain
AM341_RS10340	PF04405	AM341_RS10340
AM341_RS10345	PF00324	Amino acid permease
AM341_RS10350	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AM341_RS10350	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AM341_RS10360	PF04225	Opacity-associated protein A LysM-like domain
AM341_RS10360	PF08525	AM341_RS10360
AM341_RS10370	PF01385	AM341_RS10370
AM341_RS10370	PF07282	AM341_RS10370
AM341_RS10370	PF12323	AM341_RS10370
AM341_RS10375	PF01797	Transposase IS200 like
AM341_RS10385	PF10887	AM341_RS10385
AM341_RS10390	PF01281	Ribosomal protein L9, N-terminal domain
AM341_RS10390	PF03948	Ribosomal protein L9, C-terminal domain
AM341_RS10395	PF01084	Ribosomal protein S18
AM341_RS10400	PF00436	Single-strand binding protein family
AM341_RS10405	PF01250	Ribosomal protein S6
AM341_RS10410	PF07338	Protein of unknown function (DUF1471)
AM341_RS10415	PF07274	AM341_RS10415
AM341_RS10420	PF00596	Class II Aldolase and Adducin N-terminal domain
AM341_RS10425	PF01261	Xylose isomerase-like TIM barrel
AM341_RS10430	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM341_RS10435	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS10440	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS10455	PF00455	AM341_RS10455
AM341_RS10455	PF08220	DeoR-like helix-turn-helix domain
AM341_RS10460	PF00326	Prolyl oligopeptidase family
AM341_RS10465	PF07338	Protein of unknown function (DUF1471)
AM341_RS10470	PF07338	Protein of unknown function (DUF1471)
AM341_RS10480	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AM341_RS10480	PF02770	Acyl-CoA dehydrogenase, middle domain
AM341_RS10485	PF03738	Glutathionylspermidine synthase preATP-grasp
AM341_RS10490	PF06693	AM341_RS10490
AM341_RS10495	PF03994	AM341_RS10495
AM341_RS10500	PF10679	AM341_RS10500
AM341_RS10515	PF04295	AM341_RS10515
AM341_RS10515	PF08666	SAF domain
AM341_RS10520	PF07690	Major Facilitator Superfamily
AM341_RS10525	PF00701	Dihydrodipicolinate synthetase family
AM341_RS10530	PF01614	Bacterial transcriptional regulator
AM341_RS10530	PF09339	IclR helix-turn-helix domain
AM341_RS10535	PF00588	SpoU rRNA Methylase family
AM341_RS10535	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AM341_RS10545	PF00575	S1 RNA binding domain
AM341_RS10545	PF00773	RNB domain
AM341_RS10545	PF08206	Ribonuclease B OB domain
AM341_RS10545	PF08461	Ribonuclease R winged-helix domain
AM341_RS10550	PF02082	Transcriptional regulator
AM341_RS10555	PF00709	Adenylosuccinate synthetase
AM341_RS10560	PF09838	AM341_RS10560
AM341_RS10565	PF01145	SPFH domain / Band 7 family
AM341_RS10570	PF01145	SPFH domain / Band 7 family
AM341_RS10570	PF12221	AM341_RS10570
AM341_RS10575	PF01926	50S ribosome-binding GTPase
AM341_RS10575	PF13167	AM341_RS10575
AM341_RS10575	PF16360	AM341_RS10575
AM341_RS10580	PF17209	AM341_RS10580
AM341_RS10585	PF01715	IPP transferase
AM341_RS10590	PF01119	DNA mismatch repair protein, C-terminal domain
AM341_RS10590	PF08676	MutL C terminal dimerisation domain
AM341_RS10590	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS10595	PF01520	N-acetylmuramoyl-L-alanine amidase
AM341_RS10600	PF02367	Uncharacterised P-loop hydrolase UPF0079
AM341_RS10605	PF01256	Carbohydrate kinase
AM341_RS10605	PF03853	YjeF-related protein N-terminus
AM341_RS10610	PF08331	AM341_RS10610
AM341_RS10610	PF13484	AM341_RS10610
AM341_RS10630	PF00929	Exonuclease
AM341_RS10640	PF03193	Protein of unknown function, DUF258
AM341_RS10645	PF02666	AM341_RS10645
AM341_RS10650	PF00924	Mechanosensitive ion channel
AM341_RS10650	PF12794	AM341_RS10650
AM341_RS10650	PF12795	AM341_RS10650
AM341_RS10655	PF10840	AM341_RS10655
AM341_RS10665	PF13520	Amino acid permease
AM341_RS10670	PF00152	tRNA synthetases class II (D, K and N)
AM341_RS10675	PF00890	FAD binding domain
AM341_RS10675	PF02910	Fumarate reductase flavoprotein C-term
AM341_RS10680	PF13085	2Fe-2S iron-sulfur cluster binding domain
AM341_RS10680	PF13183	4Fe-4S dicluster domain
AM341_RS10685	PF02300	Fumarate reductase subunit C
AM341_RS10690	PF02313	Fumarate reductase subunit D
AM341_RS10695	PF00144	Beta-lactamase
AM341_RS10700	PF08212	Lipocalin-like domain
AM341_RS10705	PF00893	Small Multidrug Resistance protein
AM341_RS10710	PF08085	AM341_RS10710
AM341_RS10715	PF08085	AM341_RS10715
AM341_RS10720	PF01132	Elongation factor P (EF-P) OB domain
AM341_RS10720	PF08207	Elongation factor P (EF-P) KOW-like domain
AM341_RS10720	PF09285	Elongation factor P, C-terminal
AM341_RS10725	PF04055	Radical SAM superfamily
AM341_RS10725	PF13353	4Fe-4S single cluster domain
AM341_RS10730	PF15922	AM341_RS10730
AM341_RS10735	PF13698	AM341_RS10735
AM341_RS10740	PF00118	TCP-1/cpn60 chaperonin family
AM341_RS10745	PF00166	Chaperonin 10 Kd subunit
AM341_RS10750	PF13520	Amino acid permease
AM341_RS10755	PF04186	AM341_RS10755
AM341_RS10760	PF00206	Lyase
AM341_RS10760	PF10415	Fumarase C C-terminus
AM341_RS10765	PF03605	AM341_RS10765
AM341_RS10770	PF03091	CutA1 divalent ion tolerance protein
AM341_RS10775	PF02683	AM341_RS10775
AM341_RS10775	PF11412	Disulphide bond corrector protein DsbC
AM341_RS10775	PF13899	Thioredoxin-like
AM341_RS10795	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS10800	PF13520	Amino acid permease
AM341_RS10805	PF01276	Orn/Lys/Arg decarboxylase, major domain
AM341_RS10805	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AM341_RS10805	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AM341_RS10810	PF00854	POT family
AM341_RS10815	PF00152	tRNA synthetases class II (D, K and N)
AM341_RS10815	PF01336	OB-fold nucleic acid binding domain
AM341_RS10820	PF10753	AM341_RS10820
AM341_RS10825	PF11080	Protein of unknown function (DUF2622)
AM341_RS10835	PF14542	GCN5-related N-acetyl-transferase
AM341_RS10840	PF06902	Divergent 4Fe-4S mono-cluster
AM341_RS10845	PF00989	PAS fold
AM341_RS10845	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS10845	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
AM341_RS10845	PF17203	AM341_RS10845
AM341_RS10850	PF00072	Response regulator receiver domain
AM341_RS10860	PF03605	AM341_RS10860
AM341_RS10865	PF05681	AM341_RS10865
AM341_RS10865	PF05683	Fumarase C-terminus
AM341_RS10870	PF09997	AM341_RS10870
AM341_RS10875	PF13347	MFS/sugar transport protein
AM341_RS10880	PF02056	Family 4 glycosyl hydrolase
AM341_RS10880	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AM341_RS10885	PF12833	Helix-turn-helix domain
AM341_RS10890	PF01276	Orn/Lys/Arg decarboxylase, major domain
AM341_RS10890	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AM341_RS10890	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AM341_RS10895	PF12833	Helix-turn-helix domain
AM341_RS10900	PF13520	Amino acid permease
AM341_RS10905	PF00884	Sulfatase
AM341_RS10905	PF08019	AM341_RS10905
AM341_RS10910	PF00072	Response regulator receiver domain
AM341_RS10910	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS10915	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS10915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS10925	PF00083	Sugar (and other) transporter
AM341_RS10925	PF08946	Osmosensory transporter coiled coil
AM341_RS10930	PF13990	AM341_RS10930
AM341_RS10945	PF03831	PhnA protein
AM341_RS10945	PF08274	PhnA Zinc-Ribbon
AM341_RS10950	PF06983	3-demethylubiquinone-9 3-methyltransferase
AM341_RS10955	PF00005	ABC transporter
AM341_RS10960	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
AM341_RS10970	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS10970	PF07702	UTRA domain
AM341_RS10975	PF06754	AM341_RS10975
AM341_RS10980	PF05845	Bacterial phosphonate metabolism protein (PhnH)
AM341_RS10985	PF05861	AM341_RS10985
AM341_RS10990	PF06007	AM341_RS10990
AM341_RS10995	PF00005	ABC transporter
AM341_RS11000	PF00005	ABC transporter
AM341_RS11005	PF07969	Amidohydrolase family
AM341_RS11010	PF13238	AAA domain
AM341_RS11015	PF00583	Acetyltransferase (GNAT) family
AM341_RS11020	PF12706	Beta-lactamase superfamily domain
AM341_RS11030	PF02502	Ribose/Galactose Isomerase
AM341_RS11040	PF01380	SIS domain
AM341_RS11040	PF01418	Helix-turn-helix domain, rpiR family
AM341_RS11045	PF13407	Periplasmic binding protein domain
AM341_RS11050	PF00005	ABC transporter
AM341_RS11055	PF02653	AM341_RS11055
AM341_RS11060	PF00834	Ribulose-phosphate 3 epimerase family
AM341_RS11065	PF00480	ROK family
AM341_RS11070	PF00753	Metallo-beta-lactamase superfamily
AM341_RS11070	PF14863	Alkyl sulfatase dimerisation
AM341_RS11070	PF14864	Alkyl sulfatase C-terminal
AM341_RS11075	PF17090	AM341_RS11075
AM341_RS11080	PF13437	HlyD family secretion protein
AM341_RS11080	PF13533	Biotin-lipoyl like
AM341_RS11085	PF04632	AM341_RS11085
AM341_RS11090	PF02321	Outer membrane efflux protein
AM341_RS11100	PF08238	Sel1 repeat
AM341_RS11105	PF00375	Sodium:dicarboxylate symporter family
AM341_RS11120	PF03918	Cytochrome C biogenesis protein
AM341_RS11125	PF01578	AM341_RS11125
AM341_RS11125	PF16327	AM341_RS11125
AM341_RS11130	PF03916	AM341_RS11130
AM341_RS11135	PF00037	4Fe-4S binding domain
AM341_RS11135	PF13247	4Fe-4S dicluster domain
AM341_RS11140	PF09699	Doubled CXXCH motif (Paired_CXXCH_1)
AM341_RS11140	PF13435	Cytochrome c554 and c-prime
AM341_RS11145	PF02335	Cytochrome c552
AM341_RS11155	PF00501	AMP-binding enzyme
AM341_RS11155	PF13193	AMP-binding enzyme C-terminal domain
AM341_RS11155	PF16177	AM341_RS11155
AM341_RS11160	PF04341	AM341_RS11160
AM341_RS11165	PF00474	Sodium:solute symporter family
AM341_RS11170	PF00805	Pentapeptide repeats (8 copies)
AM341_RS11170	PF13599	Pentapeptide repeats (9 copies)
AM341_RS11175	PF00999	Sodium/hydrogen exchanger family
AM341_RS11180	PF00860	Permease family
AM341_RS11200	PF00376	MerR family regulatory protein
AM341_RS11200	PF09278	MerR, DNA binding
AM341_RS11205	PF12833	Helix-turn-helix domain
AM341_RS11210	PF00563	EAL domain
AM341_RS11210	PF12792	AM341_RS11210
AM341_RS11220	PF15940	AM341_RS11220
AM341_RS11225	PF10899	AM341_RS11225
AM341_RS11255	PF00589	Phage integrase family
AM341_RS11260	PF00436	Single-strand binding protein family
AM341_RS11265	PF00005	ABC transporter
AM341_RS11270	PF04237	YjbR
AM341_RS11275	PF01894	Uncharacterised protein family UPF0047
AM341_RS11280	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
AM341_RS11290	PF00155	Aminotransferase class I and II
AM341_RS11295	PF00842	Alanine racemase, C-terminal domain
AM341_RS11295	PF01168	Alanine racemase, N-terminal domain
AM341_RS11300	PF00772	DnaB-like helicase N terminal domain
AM341_RS11300	PF03796	DnaB-like helicase C terminal domain
AM341_RS11305	PF00107	Zinc-binding dehydrogenase
AM341_RS11305	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS11310	PF09583	AM341_RS11310
AM341_RS11315	PF01207	Dihydrouridine synthase (Dus)
AM341_RS11320	PF00589	Phage integrase family
AM341_RS11325	PF06183	DinI-like family
AM341_RS11330	PF02413	AM341_RS11330
AM341_RS11335	PF08400	AM341_RS11335
AM341_RS11335	PF13884	Chaperone of endosialidase
AM341_RS11340	PF06316	Enterobacterial Ail/Lom protein
AM341_RS11345	PF09327	AM341_RS11345
AM341_RS11345	PF12421	AM341_RS11345
AM341_RS11345	PF13550	AM341_RS11345
AM341_RS11350	PF06805	AM341_RS11350
AM341_RS11355	PF00877	NlpC/P60 family
AM341_RS11355	PF14464	Prokaryotic homologs of the JAB domain
AM341_RS11360	PF05100	AM341_RS11360
AM341_RS11365	PF05939	AM341_RS11365
AM341_RS11370	PF06791	AM341_RS11370
AM341_RS11370	PF09718	AM341_RS11370
AM341_RS11375	PF06223	AM341_RS11375
AM341_RS11380	PF06894	AM341_RS11380
AM341_RS11385	PF02368	Bacterial Ig-like domain (group 2)
AM341_RS11385	PF16461	AM341_RS11385
AM341_RS11390	PF06141	Phage minor tail protein U
AM341_RS11395	PF06763	AM341_RS11395
AM341_RS11400	PF13856	ATP-binding sugar transporter from pro-phage
AM341_RS11405	PF09956	AM341_RS11405
AM341_RS11410	PF00574	Clp protease
AM341_RS11410	PF10124	AM341_RS11410
AM341_RS11415	PF05136	AM341_RS11415
AM341_RS11425	PF05876	AM341_RS11425
AM341_RS11430	PF07278	AM341_RS11430
AM341_RS11450	PF03245	AM341_RS11450
AM341_RS11455	PF00959	Phage lysozyme
AM341_RS11460	PF04971	AM341_RS11460
AM341_RS11465	PF01555	DNA methylase
AM341_RS11475	PF03235	AM341_RS11475
AM341_RS11485	PF00145	C-5 cytosine-specific DNA methylase
AM341_RS11490	PF06530	AM341_RS11490
AM341_RS11495	PF06147	AM341_RS11495
AM341_RS11500	PF04383	KilA-N domain
AM341_RS11505	PF05866	Endodeoxyribonuclease RusA
AM341_RS11510	PF01726	LexA DNA binding domain
AM341_RS11520	PF13730	AM341_RS11520
AM341_RS11525	PF13973	AM341_RS11525
AM341_RS11535	PF01381	Helix-turn-helix
AM341_RS11545	PF00717	Peptidase S24-like
AM341_RS11545	PF13560	Helix-turn-helix domain
AM341_RS11575	PF13935	AM341_RS11575
AM341_RS11580	PF04448	AM341_RS11580
AM341_RS11585	PF16473	AM341_RS11585
AM341_RS11590	PF11112	AM341_RS11590
AM341_RS11605	PF10897	AM341_RS11605
AM341_RS11615	PF01475	Ferric uptake regulator family
AM341_RS11620	PF05532	CsbD-like
AM341_RS11625	PF01554	MatE
AM341_RS11630	PF00717	Peptidase S24-like
AM341_RS11630	PF01726	LexA DNA binding domain
AM341_RS11635	PF01219	Prokaryotic diacylglycerol kinase
AM341_RS11640	PF01553	Acyltransferase
AM341_RS11645	PF01040	UbiA prenyltransferase family
AM341_RS11650	PF04345	Chorismate lyase
AM341_RS11660	PF13599	Pentapeptide repeats (9 copies)
AM341_RS11660	PF13981	SopA-like central domain
AM341_RS11670	PF07148	AM341_RS11670
AM341_RS11675	PF02264	LamB porin
AM341_RS11680	PF00005	ABC transporter
AM341_RS11680	PF08402	TOBE domain
AM341_RS11690	PF13416	Bacterial extracellular solute-binding protein
AM341_RS11695	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS11695	PF14785	Maltose transport system permease protein MalF P2 domain
AM341_RS11700	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS11705	PF00083	Sugar (and other) transporter
AM341_RS11710	PF06146	AM341_RS11710
AM341_RS11715	PF17089	AM341_RS11715
AM341_RS11720	PF06082	AM341_RS11720
AM341_RS11725	PF06251	Capsule biosynthesis GfcC
AM341_RS11730	PF11102	Group 4 capsule polysaccharide formation lipoprotein gfcB
AM341_RS11735	PF11106	AM341_RS11735
AM341_RS11740	PF00342	Phosphoglucose isomerase
AM341_RS11750	PF00696	Amino acid kinase family
AM341_RS11750	PF01842	ACT domain
AM341_RS11755	PF11656	AM341_RS11755
AM341_RS11760	PF00849	RNA pseudouridylate synthase
AM341_RS11760	PF01479	S4 domain
AM341_RS11765	PF03575	Peptidase family S51
AM341_RS11770	PF02690	AM341_RS11770
AM341_RS11775	PF00809	Pterin binding enzyme
AM341_RS11775	PF02310	B12 binding domain
AM341_RS11775	PF02574	Homocysteine S-methyltransferase
AM341_RS11775	PF02607	B12 binding domain
AM341_RS11775	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AM341_RS11780	PF01614	Bacterial transcriptional regulator
AM341_RS11780	PF09339	IclR helix-turn-helix domain
AM341_RS11785	PF07906	AM341_RS11785
AM341_RS11790	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
AM341_RS11795	PF00463	Isocitrate lyase family
AM341_RS11800	PF01274	Malate synthase
AM341_RS11805	PF04204	Homoserine O-succinyltransferase
AM341_RS11810	PF13673	Acetyltransferase (GNAT) domain
AM341_RS11845	PF01808	AICARFT/IMPCHase bienzyme
AM341_RS11845	PF02142	MGS-like domain
AM341_RS11850	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AM341_RS11850	PF02843	Phosphoribosylglycinamide synthetase, C domain
AM341_RS11850	PF02844	Phosphoribosylglycinamide synthetase, N domain
AM341_RS11855	PF00072	Response regulator receiver domain
AM341_RS11855	PF00158	Sigma-54 interaction domain
AM341_RS11855	PF02954	Bacterial regulatory protein, Fis family
AM341_RS11860	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS11860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS11870	PF13801	Heavy-metal resistance
AM341_RS11875	PF07356	AM341_RS11875
AM341_RS11875	PF08139	AM341_RS11875
AM341_RS11880	PF00216	Bacterial DNA-binding protein
AM341_RS11885	PF04222	Protein of unknown function (DUF416)
AM341_RS11890	PF04493	Endonuclease V
AM341_RS11895	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AM341_RS11900	PF00293	NUDIX domain
AM341_RS11900	PF09297	NADH pyrophosphatase zinc ribbon domain
AM341_RS11905	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
AM341_RS11910	PF01964	ThiC family
AM341_RS11910	PF13667	ThiC-associated domain
AM341_RS11915	PF02581	Thiamine monophosphate synthase/TENI
AM341_RS11920	PF00899	ThiF family
AM341_RS11925	PF02597	ThiS family
AM341_RS11930	PF05690	Thiazole biosynthesis protein ThiG
AM341_RS11935	PF04055	Radical SAM superfamily
AM341_RS11935	PF06968	Biotin and Thiamin Synthesis associated domain
AM341_RS11945	PF00623	RNA polymerase Rpb1, domain 2
AM341_RS11945	PF04983	RNA polymerase Rpb1, domain 3
AM341_RS11945	PF04997	RNA polymerase Rpb1, domain 1
AM341_RS11945	PF04998	RNA polymerase Rpb1, domain 5
AM341_RS11945	PF05000	RNA polymerase Rpb1, domain 4
AM341_RS11950	PF00562	RNA polymerase Rpb2, domain 6
AM341_RS11950	PF04560	RNA polymerase Rpb2, domain 7
AM341_RS11950	PF04561	RNA polymerase Rpb2, domain 2
AM341_RS11950	PF04563	RNA polymerase beta subunit
AM341_RS11950	PF04565	RNA polymerase Rpb2, domain 3
AM341_RS11950	PF10385	RNA polymerase beta subunit external 1 domain
AM341_RS11955	PF00542	Ribosomal protein L7/L12 C-terminal domain
AM341_RS11955	PF16320	AM341_RS11955
AM341_RS11960	PF00466	Ribosomal protein L10
AM341_RS11970	PF00687	Ribosomal protein L1p/L10e family
AM341_RS11975	PF00298	Ribosomal protein L11, RNA binding domain
AM341_RS11975	PF03946	Ribosomal protein L11, N-terminal domain
AM341_RS11980	PF00467	KOW motif
AM341_RS11980	PF02357	Transcription termination factor nusG
AM341_RS11985	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AM341_RS11990	PF00009	Elongation factor Tu GTP binding domain
AM341_RS11990	PF03143	Elongation factor Tu C-terminal domain
AM341_RS11990	PF03144	Elongation factor Tu domain 2
AM341_RS12025	PF00485	Phosphoribulokinase / Uridine kinase family
AM341_RS12030	PF02237	Biotin protein ligase C terminal domain
AM341_RS12030	PF03099	Biotin/lipoate A/B protein ligase family
AM341_RS12030	PF08279	HTH domain
AM341_RS12035	PF01565	FAD binding domain
AM341_RS12035	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AM341_RS12060	PF01177	Asp/Glu/Hydantoin racemase
AM341_RS12065	PF00593	TonB dependent receptor
AM341_RS12065	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS12070	PF05958	tRNA (Uracil-5-)-methyltransferase
AM341_RS12075	PF07226	AM341_RS12075
AM341_RS12080	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS12090	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AM341_RS12090	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS12095	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS12095	PF03466	LysR substrate binding domain
AM341_RS12100	PF00206	Lyase
AM341_RS12100	PF14698	Argininosuccinate lyase C-terminal
AM341_RS12105	PF00696	Amino acid kinase family
AM341_RS12110	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AM341_RS12110	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AM341_RS12115	PF01546	Peptidase family M20/M25/M40
AM341_RS12115	PF07687	Peptidase dimerisation domain
AM341_RS12125	PF00311	Phosphoenolpyruvate carboxylase
AM341_RS12130	PF00884	Sulfatase
AM341_RS12130	PF08019	AM341_RS12130
AM341_RS12135	PF12833	Helix-turn-helix domain
AM341_RS12140	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS12145	PF04055	Radical SAM superfamily
AM341_RS12145	PF13353	4Fe-4S single cluster domain
AM341_RS12150	PF01228	Glycine radical
AM341_RS12150	PF02901	Pyruvate formate lyase
AM341_RS12155	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS12165	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS12165	PF00381	PTS HPr component phosphorylation site
AM341_RS12165	PF00391	PEP-utilising enzyme, mobile domain
AM341_RS12165	PF02896	PEP-utilising enzyme, TIM barrel domain
AM341_RS12165	PF05524	PEP-utilising enzyme, N-terminal
AM341_RS12170	PF00923	Transaldolase
AM341_RS12175	PF00465	Iron-containing alcohol dehydrogenase
AM341_RS12180	PF06940	AM341_RS12180
AM341_RS12185	PF00892	EamA-like transporter family
AM341_RS12190	PF00141	Peroxidase
AM341_RS12195	PF02219	Methylenetetrahydrofolate reductase
AM341_RS12200	PF00696	Amino acid kinase family
AM341_RS12200	PF00742	Homoserine dehydrogenase
AM341_RS12200	PF03447	Homoserine dehydrogenase, NAD binding domain
AM341_RS12205	PF01053	Cys/Met metabolism PLP-dependent enzyme
AM341_RS12210	PF01340	Met Apo-repressor, MetJ
AM341_RS12215	PF05708	Orthopoxvirus protein of unknown function (DUF830)
AM341_RS12220	PF01197	Ribosomal protein L31
AM341_RS12225	PF00270	DEAD/DEAH box helicase
AM341_RS12225	PF00271	Helicase conserved C-terminal domain
AM341_RS12230	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS12230	PF13377	Periplasmic binding protein-like domain
AM341_RS12235	PF05036	Sporulation related domain
AM341_RS12240	PF00227	Proteasome subunit
AM341_RS12245	PF00004	ATPase family associated with various cellular activities (AAA)
AM341_RS12245	PF07724	AAA domain (Cdc48 subfamily)
AM341_RS12245	PF10431	C-terminal, D2-small domain, of ClpB protein
AM341_RS12250	PF01040	UbiA prenyltransferase family
AM341_RS12255	PF03737	Demethylmenaquinone methyltransferase
AM341_RS12260	PF06005	Protein of unknown function (DUF904)
AM341_RS12265	PF00230	Major intrinsic protein
AM341_RS12270	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS12270	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS12275	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AM341_RS12280	PF00175	Oxidoreductase NAD-binding domain
AM341_RS12280	PF00970	Oxidoreductase FAD-binding domain
AM341_RS12285	PF00582	Universal stress protein family
AM341_RS12290	PF04175	Protein of unknown function (DUF406)
AM341_RS12295	PF05656	AM341_RS12295
AM341_RS12300	PF07305	AM341_RS12300
AM341_RS12305	PF00121	Triosephosphate isomerase
AM341_RS12310	PF02611	CDP-diacylglycerol pyrophosphatase
AM341_RS12315	PF13531	Bacterial extracellular solute-binding protein
AM341_RS12320	PF00365	Phosphofructokinase
AM341_RS12325	PF01545	Cation efflux family
AM341_RS12325	PF16916	AM341_RS12325
AM341_RS12330	PF07813	LTXXQ motif family protein
AM341_RS12335	PF00072	Response regulator receiver domain
AM341_RS12335	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS12340	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS12340	PF00672	HAMP domain
AM341_RS12340	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS12340	PF16527	AM341_RS12340
AM341_RS12345	PF03473	MOSC domain
AM341_RS12345	PF03475	3-alpha domain
AM341_RS12350	PF03812	AM341_RS12350
AM341_RS12360	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AM341_RS12360	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AM341_RS12365	PF06379	AM341_RS12365
AM341_RS12370	PF02311	AraC-like ligand binding domain
AM341_RS12370	PF12833	Helix-turn-helix domain
AM341_RS12375	PF02311	AraC-like ligand binding domain
AM341_RS12375	PF12833	Helix-turn-helix domain
AM341_RS12380	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS12380	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS12385	PF06134	L-rhamnose isomerase (RhaA)
AM341_RS12390	PF00596	Class II Aldolase and Adducin N-terminal domain
AM341_RS12395	PF05336	Domain of unknown function (DUF718)
AM341_RS12400	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS12405	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS12405	PF02378	Phosphotransferase system, EIIC
AM341_RS12410	PF05343	M42 glutamyl aminopeptidase
AM341_RS12415	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS12415	PF08279	HTH domain
AM341_RS12420	PF12889	Protein of unknown function (DUF3829)
AM341_RS12425	PF02634	FdhD/NarQ family
AM341_RS12435	PF00384	Molybdopterin oxidoreductase
AM341_RS12435	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AM341_RS12440	PF00384	Molybdopterin oxidoreductase
AM341_RS12440	PF01568	Molydopterin dinucleotide binding domain
AM341_RS12445	PF09163	Formate dehydrogenase N, transmembrane
AM341_RS12445	PF13247	4Fe-4S dicluster domain
AM341_RS12450	PF01292	Prokaryotic cytochrome b561
AM341_RS12455	PF04216	Protein involved in formate dehydrogenase formation
AM341_RS12465	PF01402	Ribbon-helix-helix protein, copG family
AM341_RS12470	PF00583	Acetyltransferase (GNAT) family
AM341_RS12470	PF09500	Putative thioesterase (yiiD_Cterm)
AM341_RS12475	PF02580	D-Tyr-tRNA(Tyr) deacylase
AM341_RS12480	PF03631	AM341_RS12480
AM341_RS12485	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS12490	PF00455	AM341_RS12490
AM341_RS12490	PF08220	DeoR-like helix-turn-helix domain
AM341_RS12495	PF00294	pfkB family carbohydrate kinase
AM341_RS12500	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AM341_RS12500	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AM341_RS12505	PF01791	DeoC/LacD family aldolase
AM341_RS12510	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
AM341_RS12515	PF01263	Aldose 1-epimerase
AM341_RS12520	PF01055	Glycosyl hydrolases family 31
AM341_RS12525	PF13347	MFS/sugar transport protein
AM341_RS12530	PF13347	MFS/sugar transport protein
AM341_RS12535	PF06178	Oligogalacturonate-specific porin protein (KdgM)
AM341_RS12540	PF07690	Major Facilitator Superfamily
AM341_RS12545	PF01261	Xylose isomerase-like TIM barrel
AM341_RS12550	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS12550	PF07702	UTRA domain
AM341_RS12555	PF00009	Elongation factor Tu GTP binding domain
AM341_RS12555	PF00679	Elongation factor G C-terminus
AM341_RS12555	PF03144	Elongation factor Tu domain 2
AM341_RS12565	PF00120	Glutamine synthetase, catalytic domain
AM341_RS12565	PF03951	Glutamine synthetase, beta-Grasp domain
AM341_RS12570	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS12570	PF00989	PAS fold
AM341_RS12570	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS12575	PF00072	Response regulator receiver domain
AM341_RS12575	PF00158	Sigma-54 interaction domain
AM341_RS12575	PF02954	Bacterial regulatory protein, Fis family
AM341_RS12585	PF04055	Radical SAM superfamily
AM341_RS12585	PF06969	HemN C-terminal domain
AM341_RS12590	PF04220	AM341_RS12590
AM341_RS12600	PF01926	50S ribosome-binding GTPase
AM341_RS12605	PF00476	DNA polymerase family A
AM341_RS12605	PF01367	5'-3' exonuclease, C-terminal SAM fold
AM341_RS12605	PF01612	3'-5' exonuclease
AM341_RS12605	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AM341_RS12615	PF01553	Acyltransferase
AM341_RS12620	PF06097	AM341_RS12620
AM341_RS12625	PF01323	DSBA-like thioredoxin domain
AM341_RS12630	PF01636	Phosphotransferase enzyme family
AM341_RS12635	PF06288	Protein of unknown function (DUF1040)
AM341_RS12640	PF12804	MobA-like NTP transferase domain
AM341_RS12645	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AM341_RS12675	PF12724	Flavodoxin domain
AM341_RS12680	PF02386	Cation transport protein
AM341_RS12685	PF01205	Uncharacterized protein family UPF0029
AM341_RS12685	PF09186	Domain of unknown function (DUF1949)
AM341_RS12690	PF00557	Metallopeptidase family M24
AM341_RS12695	PF00378	Enoyl-CoA hydratase/isomerase family
AM341_RS12695	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AM341_RS12695	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AM341_RS12700	PF00108	Thiolase, N-terminal domain
AM341_RS12700	PF02803	Thiolase, C-terminal domain
AM341_RS12705	PF00175	Oxidoreductase NAD-binding domain
AM341_RS12705	PF00970	Oxidoreductase FAD-binding domain
AM341_RS12710	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AM341_RS12715	PF02357	Transcription termination factor nusG
AM341_RS12720	PF01026	TatD related DNase
AM341_RS12725	PF00902	Sec-independent protein translocase protein (TatC)
AM341_RS12735	PF02416	mttA/Hcf106 family
AM341_RS12740	PF03109	AM341_RS12740
AM341_RS12745	PF02036	SCP-2 sterol transfer family
AM341_RS12750	PF01209	ubiE/COQ5 methyltransferase family
AM341_RS12755	PF02646	AM341_RS12755
AM341_RS12760	PF01048	Phosphorylase superfamily
AM341_RS12765	PF01738	Dienelactone hydrolase family
AM341_RS12770	PF01717	Cobalamin-independent synthase, Catalytic domain
AM341_RS12770	PF08267	Cobalamin-independent synthase, N-terminal domain
AM341_RS12775	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS12775	PF03466	LysR substrate binding domain
AM341_RS12780	PF00892	EamA-like transporter family
AM341_RS12785	PF08282	haloacid dehalogenase-like hydrolase
AM341_RS12790	PF12146	Putative lysophospholipase
AM341_RS12795	PF01810	AM341_RS12795
AM341_RS12800	PF01810	AM341_RS12800
AM341_RS12805	PF00270	DEAD/DEAH box helicase
AM341_RS12805	PF00271	Helicase conserved C-terminal domain
AM341_RS12805	PF00570	HRDC domain
AM341_RS12805	PF09382	RQC domain
AM341_RS12805	PF16124	AM341_RS12805
AM341_RS12810	PF02253	Phospholipase A1
AM341_RS12815	PF03061	Thioesterase superfamily
AM341_RS12820	PF00892	EamA-like transporter family
AM341_RS12830	PF10947	AM341_RS12830
AM341_RS12835	PF01544	CorA-like Mg2+ transporter protein
AM341_RS12840	PF09992	Predicted periplasmic protein (DUF2233)
AM341_RS12845	PF00580	UvrD/REP helicase N-terminal domain
AM341_RS12845	PF13361	UvrD-like helicase C-terminal domain
AM341_RS12850	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS12855	PF00589	Phage integrase family
AM341_RS12855	PF02899	Phage integrase, N-terminal SAM-like domain
AM341_RS12860	PF04340	Protein of unknown function, DUF484
AM341_RS12865	PF01678	Diaminopimelate epimerase
AM341_RS12870	PF13627	AM341_RS12870
AM341_RS12875	PF01491	Frataxin-like domain
AM341_RS12880	PF01295	AM341_RS12880
AM341_RS12880	PF12633	AM341_RS12880
AM341_RS12890	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AM341_RS12890	PF03900	Porphobilinogen deaminase, C-terminal domain
AM341_RS12895	PF02602	Uroporphyrinogen-III synthase HemD
AM341_RS12900	PF04375	AM341_RS12900
AM341_RS12905	PF07219	AM341_RS12905
AM341_RS12905	PF07719	Tetratricopeptide repeat
AM341_RS12910	PF00884	Sulfatase
AM341_RS12915	PF04055	Radical SAM superfamily
AM341_RS12915	PF13186	Iron-sulfur cluster-binding domain
AM341_RS12915	PF13353	4Fe-4S single cluster domain
AM341_RS12940	PF00324	Amino acid permease
AM341_RS12945	PF03808	AM341_RS12945
AM341_RS12950	PF06899	AM341_RS12950
AM341_RS12955	PF07429	AM341_RS12955
AM341_RS12960	PF01943	AM341_RS12960
AM341_RS12965	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AM341_RS12975	PF00483	Nucleotidyl transferase
AM341_RS12980	PF16363	AM341_RS12980
AM341_RS12985	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AM341_RS12985	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AM341_RS12985	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AM341_RS12990	PF02350	UDP-N-acetylglucosamine 2-epimerase
AM341_RS12995	PF02706	Chain length determinant protein
AM341_RS13000	PF00953	Glycosyl transferase family 4
AM341_RS13010	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AM341_RS13010	PF07497	Rho termination factor, RNA-binding domain
AM341_RS13010	PF07498	Rho termination factor, N-terminal domain
AM341_RS13020	PF00085	Thioredoxin
AM341_RS13025	PF00270	DEAD/DEAH box helicase
AM341_RS13025	PF00271	Helicase conserved C-terminal domain
AM341_RS13035	PF02541	Ppx/GppA phosphatase family
AM341_RS13040	PF00580	UvrD/REP helicase N-terminal domain
AM341_RS13040	PF13361	UvrD-like helicase C-terminal domain
AM341_RS13050	PF13616	PPIC-type PPIASE domain
AM341_RS13055	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AM341_RS13055	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
AM341_RS13060	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS13060	PF03466	LysR substrate binding domain
AM341_RS13065	PF00291	Pyridoxal-phosphate dependent enzyme
AM341_RS13065	PF00585	C-terminal regulatory domain of Threonine dehydratase
AM341_RS13070	PF00920	Dehydratase family
AM341_RS13075	PF01063	Aminotransferase class IV
AM341_RS13080	PF13710	ACT domain
AM341_RS13085	PF00205	Thiamine pyrophosphate enzyme, central domain
AM341_RS13085	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AM341_RS13085	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AM341_RS13090	PF08046	AM341_RS13090
AM341_RS13100	PF01078	Magnesium chelatase, subunit ChlI
AM341_RS13100	PF13335	AM341_RS13100
AM341_RS13100	PF13541	Subunit ChlI of Mg-chelatase
AM341_RS13105	PF04219	AM341_RS13105
AM341_RS13110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS13110	PF03466	LysR substrate binding domain
AM341_RS13145	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS13145	PF07729	FCD domain
AM341_RS13150	PF07690	Major Facilitator Superfamily
AM341_RS13155	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS13155	PF13377	Periplasmic binding protein-like domain
AM341_RS13160	PF00294	pfkB family carbohydrate kinase
AM341_RS13165	PF13407	Periplasmic binding protein domain
AM341_RS13170	PF02653	AM341_RS13170
AM341_RS13175	PF00005	ABC transporter
AM341_RS13180	PF05025	RbsD / FucU transport protein family
AM341_RS13185	PF02705	AM341_RS13185
AM341_RS13190	PF07728	AAA domain (dynein-related subfamily)
AM341_RS13190	PF12592	Protein of unknown function (DUF3763)
AM341_RS13195	PF05762	VWA domain containing CoxE-like protein
AM341_RS13200	PF03590	Aspartate-ammonia ligase
AM341_RS13205	PF01037	AsnC family
AM341_RS13205	PF13412	Winged helix-turn-helix DNA-binding
AM341_RS13210	PF00258	Flavodoxin
AM341_RS13215	PF01134	Glucose inhibited division protein A
AM341_RS13215	PF13932	GidA associated domain 3
AM341_RS13220	PF02527	rRNA small subunit methyltransferase G
AM341_RS13225	PF03899	AM341_RS13225
AM341_RS13230	PF00119	ATP synthase A chain
AM341_RS13235	PF00137	ATP synthase subunit C
AM341_RS13240	PF00430	ATP synthase B/B' CF(0)
AM341_RS13245	PF00213	ATP synthase delta (OSCP) subunit
AM341_RS13250	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AM341_RS13250	PF00306	ATP synthase alpha/beta chain, C terminal domain
AM341_RS13250	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AM341_RS13255	PF00231	ATP synthase
AM341_RS13260	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AM341_RS13260	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AM341_RS13265	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
AM341_RS13265	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AM341_RS13270	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS13270	PF12804	MobA-like NTP transferase domain
AM341_RS13275	PF01380	SIS domain
AM341_RS13275	PF13522	Glutamine amidotransferase domain
AM341_RS13280	PF12849	PBP superfamily domain
AM341_RS13285	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS13290	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS13295	PF00005	ABC transporter
AM341_RS13300	PF01895	PhoU domain
AM341_RS13305	PF00874	PRD domain
AM341_RS13305	PF03123	CAT RNA binding domain
AM341_RS13310	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AM341_RS13310	PF00367	phosphotransferase system, EIIB
AM341_RS13310	PF02378	Phosphotransferase system, EIIC
AM341_RS13315	PF00232	Glycosyl hydrolase family 1
AM341_RS13325	PF00756	Putative esterase
AM341_RS13325	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AM341_RS13330	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AM341_RS13335	PF03691	AM341_RS13335
AM341_RS13340	PF01527	Transposase
AM341_RS13345	PF05717	AM341_RS13345
AM341_RS13350	PF03050	AM341_RS13350
AM341_RS13350	PF13005	AM341_RS13350
AM341_RS13350	PF13007	AM341_RS13350
AM341_RS13350	PF13817	AM341_RS13350
AM341_RS13365	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS13370	PF00860	Permease family
AM341_RS13375	PF03358	NADPH-dependent FMN reductase
AM341_RS13385	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS13385	PF03466	LysR substrate binding domain
AM341_RS13390	PF07690	Major Facilitator Superfamily
AM341_RS13395	PF03222	Tryptophan/tyrosine permease family
AM341_RS13400	PF01212	Beta-eliminating lyase
AM341_RS13405	PF08053	AM341_RS13405
AM341_RS13410	PF01926	50S ribosome-binding GTPase
AM341_RS13410	PF10396	GTP-binding protein TrmE N-terminus
AM341_RS13410	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
AM341_RS13415	PF02096	60Kd inner membrane protein
AM341_RS13415	PF14849	YidC periplasmic domain
AM341_RS13420	PF01809	AM341_RS13420
AM341_RS13425	PF00825	Ribonuclease P
AM341_RS13430	PF00468	Ribosomal protein L34
AM341_RS13440	PF00308	Bacterial dnaA  protein
AM341_RS13440	PF08299	Bacterial dnaA protein helix-turn-helix
AM341_RS13440	PF11638	DnaA N-terminal domain
AM341_RS13445	PF00712	DNA polymerase III beta subunit, N-terminal domain
AM341_RS13445	PF02767	DNA polymerase III beta subunit, central domain
AM341_RS13445	PF02768	DNA polymerase III beta subunit, C-terminal domain
AM341_RS13450	PF02463	RecF/RecN/SMC N terminal domain
AM341_RS13455	PF00204	DNA gyrase B
AM341_RS13455	PF00986	DNA gyrase B subunit, carboxyl terminus
AM341_RS13455	PF01751	Toprim domain
AM341_RS13455	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS13460	PF06078	Bacterial protein of unknown function (DUF937)
AM341_RS13465	PF08282	haloacid dehalogenase-like hydrolase
AM341_RS13475	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS13475	PF07729	FCD domain
AM341_RS13480	PF05035	2-keto-3-deoxy-galactonokinase
AM341_RS13485	PF01081	KDPG and KHG aldolase
AM341_RS13490	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AM341_RS13490	PF13378	Enolase C-terminal domain-like
AM341_RS13495	PF07690	Major Facilitator Superfamily
AM341_RS13500	PF01494	FAD binding domain
AM341_RS13505	PF07676	WD40-like Beta Propeller Repeat
AM341_RS13505	PF12566	AM341_RS13505
AM341_RS13510	PF07119	AM341_RS13510
AM341_RS13515	PF00011	Hsp20/alpha crystallin family
AM341_RS13520	PF00011	Hsp20/alpha crystallin family
AM341_RS13525	PF02080	TrkA-C domain
AM341_RS13525	PF06826	AM341_RS13525
AM341_RS13530	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS13530	PF07702	UTRA domain
AM341_RS13535	PF00367	phosphotransferase system, EIIB
AM341_RS13535	PF02378	Phosphotransferase system, EIIC
AM341_RS13545	PF02311	AraC-like ligand binding domain
AM341_RS13545	PF12833	Helix-turn-helix domain
AM341_RS13550	PF00474	Sodium:solute symporter family
AM341_RS13555	PF00884	Sulfatase
AM341_RS13555	PF16347	AM341_RS13555
AM341_RS13565	PF02656	AM341_RS13565
AM341_RS13570	PF02656	AM341_RS13570
AM341_RS13580	PF07690	Major Facilitator Superfamily
AM341_RS13590	PF13939	AM341_RS13590
AM341_RS13605	PF01610	AM341_RS13605
AM341_RS13605	PF13542	AM341_RS13605
AM341_RS13605	PF14690	AM341_RS13605
AM341_RS13615	PF08049	AM341_RS13615
AM341_RS13620	PF00205	Thiamine pyrophosphate enzyme, central domain
AM341_RS13620	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AM341_RS13620	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AM341_RS13625	PF01842	ACT domain
AM341_RS13630	PF00072	Response regulator receiver domain
AM341_RS13630	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS13635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS13635	PF05231	AM341_RS13635
AM341_RS13635	PF07730	Histidine kinase
AM341_RS13640	PF07690	Major Facilitator Superfamily
AM341_RS13645	PF07690	Major Facilitator Superfamily
AM341_RS13650	PF01979	Amidohydrolase family
AM341_RS13650	PF13382	Adenine deaminase C-terminal domain
AM341_RS13655	PF00860	Permease family
AM341_RS13660	PF06711	AM341_RS13660
AM341_RS13670	PF07690	Major Facilitator Superfamily
AM341_RS13685	PF03180	NLPA lipoprotein
AM341_RS13690	PF00892	EamA-like transporter family
AM341_RS13695	PF07690	Major Facilitator Superfamily
AM341_RS13710	PF13347	MFS/sugar transport protein
AM341_RS13715	PF01055	Glycosyl hydrolases family 31
AM341_RS13715	PF13802	Galactose mutarotase-like
AM341_RS13720	PF05170	AM341_RS13720
AM341_RS13725	PF00860	Permease family
AM341_RS13730	PF03616	AM341_RS13730
AM341_RS13735	PF00270	DEAD/DEAH box helicase
AM341_RS13735	PF00271	Helicase conserved C-terminal domain
AM341_RS13735	PF17191	AM341_RS13735
AM341_RS13740	PF00588	SpoU rRNA Methylase family
AM341_RS13740	PF12105	SpoU, rRNA methylase, C-terminal
AM341_RS13745	PF02824	TGS domain
AM341_RS13745	PF04607	Region found in RelA / SpoT proteins
AM341_RS13745	PF13291	ACT domain
AM341_RS13745	PF13328	HD domain
AM341_RS13750	PF01192	RNA polymerase Rpb6
AM341_RS13755	PF00625	Guanylate kinase
AM341_RS13760	PF01653	NAD-dependent DNA ligase adenylation domain
AM341_RS13760	PF03120	NAD-dependent DNA ligase OB-fold domain
AM341_RS13765	PF03458	AM341_RS13765
AM341_RS13775	PF01610	AM341_RS13775
AM341_RS13775	PF13542	AM341_RS13775
AM341_RS13775	PF14690	AM341_RS13775
AM341_RS13780	PF03755	AM341_RS13780
AM341_RS13780	PF08340	AM341_RS13780
AM341_RS13790	PF01138	3' exoribonuclease family, domain 1
AM341_RS13790	PF03725	3' exoribonuclease family, domain 2
AM341_RS13795	PF00156	Phosphoribosyl transferase domain
AM341_RS13800	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS13805	PF00692	dUTPase
AM341_RS13810	PF02441	Flavoprotein
AM341_RS13810	PF04127	DNA / pantothenate metabolism flavoprotein
AM341_RS13815	PF04002	RadC-like JAB domain
AM341_RS13820	PF00830	Ribosomal L28 family
AM341_RS13825	PF00471	Ribosomal protein L33
AM341_RS13830	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM341_RS13830	PF06827	Zinc finger found in FPG and IleRS
AM341_RS13830	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AM341_RS13835	PF01467	Cytidylyltransferase
AM341_RS13840	PF00534	Glycosyl transferases group 1
AM341_RS13840	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AM341_RS13845	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AM341_RS13850	PF00534	Glycosyl transferases group 1
AM341_RS13850	PF13439	Glycosyltransferase Family 4
AM341_RS13855	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
AM341_RS13860	PF01501	Glycosyl transferase family 8
AM341_RS13860	PF08437	AM341_RS13860
AM341_RS13865	PF00534	Glycosyl transferases group 1
AM341_RS13865	PF13439	Glycosyltransferase Family 4
AM341_RS13870	PF01501	Glycosyl transferase family 8
AM341_RS13870	PF08437	AM341_RS13870
AM341_RS13875	PF01501	Glycosyl transferase family 8
AM341_RS13875	PF08437	AM341_RS13875
AM341_RS13880	PF06176	Lipopolysaccharide core biosynthesis protein (WaaY)
AM341_RS13890	PF00534	Glycosyl transferases group 1
AM341_RS13895	PF04932	AM341_RS13895
AM341_RS13900	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AM341_RS13905	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AM341_RS13910	PF01370	NAD dependent epimerase/dehydratase family
AM341_RS13915	PF00155	Aminotransferase class I and II
AM341_RS13920	PF00107	Zinc-binding dehydrogenase
AM341_RS13920	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS13925	PF00535	Glycosyl transferase family 2
AM341_RS13930	PF04748	Divergent polysaccharide deacetylase
AM341_RS13935	PF01551	Peptidase family M23
AM341_RS13940	PF01676	Metalloenzyme superfamily
AM341_RS13940	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AM341_RS13950	PF00581	Rhodanese-like domain
AM341_RS13955	PF00462	Glutaredoxin
AM341_RS13960	PF02556	Preprotein translocase subunit SecB
AM341_RS13965	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AM341_RS13965	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AM341_RS13970	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS13970	PF06426	Serine acetyltransferase, N-terminal
AM341_RS13975	PF00588	SpoU rRNA Methylase family
AM341_RS13980	PF01070	FMN-dependent dehydrogenase
AM341_RS13985	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS13985	PF07729	FCD domain
AM341_RS13990	PF02652	AM341_RS13990
AM341_RS14000	PF10928	Protein of unknown function (DUF2810)
AM341_RS14010	PF05068	Mannitol repressor
AM341_RS14015	PF01232	Mannitol dehydrogenase Rossmann domain
AM341_RS14015	PF08125	Mannitol dehydrogenase C-terminal domain
AM341_RS14020	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS14020	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS14020	PF02378	Phosphotransferase system, EIIC
AM341_RS14025	PF11742	AM341_RS14025
AM341_RS14030	PF00529	HlyD family secretion protein
AM341_RS14030	PF16576	AM341_RS14030
AM341_RS14035	PF15596	AM341_RS14035
AM341_RS14075	PF13646	HEAT repeats
AM341_RS14080	PF03527	AM341_RS14080
AM341_RS14080	PF05593	AM341_RS14080
AM341_RS14080	PF15606	AM341_RS14080
AM341_RS14085	PF00043	Glutathione S-transferase, C-terminal domain
AM341_RS14085	PF13417	Glutathione S-transferase, N-terminal domain
AM341_RS14090	PF03841	L-seryl-tRNA selenium transferase
AM341_RS14090	PF12390	AM341_RS14090
AM341_RS14095	PF00009	Elongation factor Tu GTP binding domain
AM341_RS14095	PF03144	Elongation factor Tu domain 2
AM341_RS14095	PF09106	Elongation factor SelB, winged helix
AM341_RS14095	PF09107	Elongation factor SelB, winged helix
AM341_RS14100	PF00465	Iron-containing alcohol dehydrogenase
AM341_RS14105	PF00171	Aldehyde dehydrogenase family
AM341_RS14120	PF11742	AM341_RS14120
AM341_RS14125	PF00529	HlyD family secretion protein
AM341_RS14125	PF16576	AM341_RS14125
AM341_RS14130	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS14130	PF03466	LysR substrate binding domain
AM341_RS14135	PF06629	AM341_RS14135
AM341_RS14145	PF00596	Class II Aldolase and Adducin N-terminal domain
AM341_RS14150	PF01261	Xylose isomerase-like TIM barrel
AM341_RS14155	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM341_RS14160	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS14160	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS14165	PF03480	Bacterial extracellular solute-binding protein, family 7
AM341_RS14170	PF06808	AM341_RS14170
AM341_RS14175	PF04290	AM341_RS14175
AM341_RS14180	PF04074	Domain of unknown function (DUF386)
AM341_RS14185	PF02615	Malate/L-lactate dehydrogenase
AM341_RS14190	PF01614	Bacterial transcriptional regulator
AM341_RS14190	PF09339	IclR helix-turn-helix domain
AM341_RS14195	PF13247	4Fe-4S dicluster domain
AM341_RS14200	PF00155	Aminotransferase class I and II
AM341_RS14205	PF00128	Alpha amylase, catalytic domain
AM341_RS14210	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AM341_RS14215	PF12833	Helix-turn-helix domain
AM341_RS14215	PF13377	Periplasmic binding protein-like domain
AM341_RS14220	PF02653	AM341_RS14220
AM341_RS14225	PF00005	ABC transporter
AM341_RS14230	PF13407	Periplasmic binding protein domain
AM341_RS14240	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS14240	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS14245	PF05360	AM341_RS14245
AM341_RS14250	PF05360	AM341_RS14250
AM341_RS14255	PF01757	AM341_RS14255
AM341_RS14260	PF13983	AM341_RS14260
AM341_RS14265	PF02091	Glycyl-tRNA synthetase alpha subunit
AM341_RS14270	PF02092	AM341_RS14270
AM341_RS14270	PF05746	DALR anticodon binding domain
AM341_RS14280	PF01848	AM341_RS14280
AM341_RS14285	PF00313	'Cold-shock' DNA-binding domain
AM341_RS14290	PF01381	Helix-turn-helix
AM341_RS14295	PF11254	AM341_RS14295
AM341_RS14300	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AM341_RS14300	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AM341_RS14305	PF00691	OmpA family
AM341_RS14305	PF13488	AM341_RS14305
AM341_RS14310	PF00384	Molybdopterin oxidoreductase
AM341_RS14310	PF01568	Molydopterin dinucleotide binding domain
AM341_RS14315	PF13673	Acetyltransferase (GNAT) domain
AM341_RS14320	PF03352	Methyladenine glycosylase
AM341_RS14325	PF03797	Autotransporter beta-domain
AM341_RS14335	PF07690	Major Facilitator Superfamily
AM341_RS14340	PF00884	Sulfatase
AM341_RS14340	PF08019	AM341_RS14340
AM341_RS14360	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS14365	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS14370	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS14370	PF12911	AM341_RS14370
AM341_RS14375	PF00005	ABC transporter
AM341_RS14375	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AM341_RS14380	PF00005	ABC transporter
AM341_RS14380	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AM341_RS14385	PF03222	Tryptophan/tyrosine permease family
AM341_RS14400	PF13940	AM341_RS14400
AM341_RS14405	PF11658	AM341_RS14405
AM341_RS14410	PF11120	AM341_RS14410
AM341_RS14415	PF10995	AM341_RS14415
AM341_RS14420	PF10945	AM341_RS14420
AM341_RS14430	PF00535	Glycosyl transferase family 2
AM341_RS14430	PF03552	Cellulose synthase
AM341_RS14430	PF07238	PilZ domain
AM341_RS14435	PF03170	Bacterial cellulose synthase subunit
AM341_RS14440	PF01270	Glycosyl hydrolases family 8
AM341_RS14445	PF05420	AM341_RS14445
AM341_RS14445	PF13432	Tetratricopeptide repeat
AM341_RS14445	PF14559	Tetratricopeptide repeat
AM341_RS14450	PF00563	EAL domain
AM341_RS14450	PF00672	HAMP domain
AM341_RS14450	PF00990	GGDEF domain
AM341_RS14450	PF17154	AM341_RS14450
AM341_RS14460	PF00375	Sodium:dicarboxylate symporter family
AM341_RS14465	PF00675	Insulinase (Peptidase family M16)
AM341_RS14465	PF05193	Peptidase M16 inactive domain
AM341_RS14470	PF00294	pfkB family carbohydrate kinase
AM341_RS14480	PF00563	EAL domain
AM341_RS14485	PF05170	AM341_RS14485
AM341_RS14490	PF00083	Sugar (and other) transporter
AM341_RS14490	PF07690	Major Facilitator Superfamily
AM341_RS14495	PF03631	AM341_RS14495
AM341_RS14500	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS14500	PF03466	LysR substrate binding domain
AM341_RS14505	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS14510	PF01204	Trehalase
AM341_RS14515	PF00034	Cytochrome c
AM341_RS14515	PF03150	Di-haem cytochrome c peroxidase
AM341_RS14515	PF14376	AM341_RS14515
AM341_RS14520	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AM341_RS14525	PF12833	Helix-turn-helix domain
AM341_RS14530	PF12833	Helix-turn-helix domain
AM341_RS14540	PF00873	AcrB/AcrD/AcrF family
AM341_RS14545	PF00529	HlyD family secretion protein
AM341_RS14545	PF16576	AM341_RS14545
AM341_RS14555	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS14560	PF03729	AM341_RS14560
AM341_RS14565	PF06411	HdeA/HdeB family
AM341_RS14570	PF06411	HdeA/HdeB family
AM341_RS14575	PF02308	AM341_RS14575
AM341_RS14580	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS14590	PF03843	AM341_RS14590
AM341_RS14600	PF03960	ArsC family
AM341_RS14605	PF02040	AM341_RS14605
AM341_RS14610	PF01022	Bacterial regulatory protein, arsR family
AM341_RS14625	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AM341_RS14625	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS14630	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
AM341_RS14635	PF01432	Peptidase family M3
AM341_RS14640	PF04445	Putative SAM-dependent methyltransferase
AM341_RS14645	PF00854	POT family
AM341_RS14655	PF00582	Universal stress protein family
AM341_RS14660	PF10625	AM341_RS14660
AM341_RS14665	PF01384	AM341_RS14665
AM341_RS14670	PF03486	HI0933-like protein
AM341_RS14675	PF10951	AM341_RS14675
AM341_RS14685	PF13258	AM341_RS14685
AM341_RS14690	PF13258	AM341_RS14690
AM341_RS14695	PF13437	HlyD family secretion protein
AM341_RS14695	PF13533	Biotin-lipoyl like
AM341_RS14700	PF00005	ABC transporter
AM341_RS14700	PF12698	ABC-2 family transporter protein
AM341_RS14705	PF12698	ABC-2 family transporter protein
AM341_RS14710	PF01609	Transposase DDE domain
AM341_RS14710	PF13808	AM341_RS14710
AM341_RS14720	PF15631	AM341_RS14720
AM341_RS14725	PF03527	AM341_RS14725
AM341_RS14725	PF05593	AM341_RS14725
AM341_RS14725	PF14220	AM341_RS14725
AM341_RS14730	PF01402	Ribbon-helix-helix protein, copG family
AM341_RS14730	PF08753	NikR C terminal nickel binding domain
AM341_RS14735	PF00005	ABC transporter
AM341_RS14740	PF00005	ABC transporter
AM341_RS14745	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS14750	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS14755	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS14760	PF01648	4'-phosphopantetheinyl transferase superfamily
AM341_RS14765	PF01594	AM341_RS14765
AM341_RS14770	PF07690	Major Facilitator Superfamily
AM341_RS14775	PF08786	Domain of unknown function (DUF1795)
AM341_RS14780	PF02592	AM341_RS14780
AM341_RS14785	PF01206	Sulfurtransferase TusA
AM341_RS14790	PF00122	E1-E2 ATPase
AM341_RS14790	PF00403	Heavy-metal-associated domain
AM341_RS14790	PF00702	haloacid dehalogenase-like hydrolase
AM341_RS14795	PF07947	AM341_RS14795
AM341_RS14800	PF10694	Protein of unknown function (DUF2500)
AM341_RS14805	PF06611	AM341_RS14805
AM341_RS14810	PF03602	Conserved hypothetical protein 95
AM341_RS14815	PF00448	SRP54-type protein, GTPase domain
AM341_RS14815	PF02881	SRP54-type protein, helical bundle domain
AM341_RS14820	PF00005	ABC transporter
AM341_RS14825	PF02687	AM341_RS14825
AM341_RS14830	PF04542	Sigma-70 region 2
AM341_RS14830	PF04545	Sigma-70, region 4
AM341_RS14835	PF13458	Periplasmic binding protein
AM341_RS14840	PF12568	Acetyltransferase (GNAT) domain
AM341_RS14845	PF15945	AM341_RS14845
AM341_RS14850	PF13458	Periplasmic binding protein
AM341_RS14855	PF02653	AM341_RS14855
AM341_RS14860	PF02653	AM341_RS14860
AM341_RS14860	PF11862	AM341_RS14860
AM341_RS14865	PF00005	ABC transporter
AM341_RS14865	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AM341_RS14870	PF00005	ABC transporter
AM341_RS14875	PF13416	Bacterial extracellular solute-binding protein
AM341_RS14880	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS14885	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS14890	PF00005	ABC transporter
AM341_RS14890	PF08402	TOBE domain
AM341_RS14895	PF03009	Glycerophosphoryl diester phosphodiesterase family
AM341_RS14905	PF01019	Gamma-glutamyltranspeptidase
AM341_RS14910	PF15567	AM341_RS14910
AM341_RS14925	PF05638	Protein of unknown function (DUF796)
AM341_RS14925	PF12639	DNase/tRNase domain of colicin-like bacteriocin
AM341_RS14930	PF00583	Acetyltransferase (GNAT) family
AM341_RS14940	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AM341_RS14940	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AM341_RS14945	PF02678	Pirin
AM341_RS14950	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS14950	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AM341_RS14955	PF01202	Shikimate kinase
AM341_RS14960	PF02447	AM341_RS14960
AM341_RS14965	PF01914	AM341_RS14965
AM341_RS14970	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AM341_RS14970	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AM341_RS14975	PF00128	Alpha amylase, catalytic domain
AM341_RS14975	PF02806	Alpha amylase, C-terminal all-beta domain
AM341_RS14975	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AM341_RS14980	PF00128	Alpha amylase, catalytic domain
AM341_RS14980	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AM341_RS14985	PF00483	Nucleotidyl transferase
AM341_RS14990	PF00534	Glycosyl transferases group 1
AM341_RS14990	PF08323	Starch synthase catalytic domain
AM341_RS14995	PF00343	Carbohydrate phosphorylase
AM341_RS15005	PF01266	FAD dependent oxidoreductase
AM341_RS15005	PF16901	AM341_RS15005
AM341_RS15010	PF00581	Rhodanese-like domain
AM341_RS15015	PF01694	Rhomboid family
AM341_RS15015	PF12122	Protein of unknown function (DUF3582)
AM341_RS15020	PF00455	AM341_RS15020
AM341_RS15020	PF08220	DeoR-like helix-turn-helix domain
AM341_RS15025	PF00158	Sigma-54 interaction domain
AM341_RS15025	PF06956	AM341_RS15025
AM341_RS15030	PF01139	tRNA-splicing ligase RtcB
AM341_RS15035	PF01137	RNA 3'-terminal phosphate cyclase
AM341_RS15035	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain
AM341_RS15040	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS15045	PF00343	Carbohydrate phosphorylase
AM341_RS15050	PF02446	4-alpha-glucanotransferase
AM341_RS15055	PF02447	AM341_RS15055
AM341_RS15060	PF01106	NifU-like domain
AM341_RS15060	PF01521	Iron-sulphur cluster biosynthesis
AM341_RS15065	PF00156	Phosphoribosyl transferase domain
AM341_RS15070	PF00561	alpha/beta hydrolase fold
AM341_RS15075	PF04754	AM341_RS15075
AM341_RS15085	PF09012	FeoC like transcriptional regulator
AM341_RS15090	PF02421	Ferrous iron transport protein B
AM341_RS15090	PF07664	AM341_RS15090
AM341_RS15090	PF07670	Nucleoside recognition
AM341_RS15095	PF04023	FeoA domain
AM341_RS15105	PF00575	S1 RNA binding domain
AM341_RS15105	PF09371	Tex-like protein N-terminal domain
AM341_RS15105	PF12836	Helix-hairpin-helix motif
AM341_RS15105	PF16921	AM341_RS15105
AM341_RS15110	PF01272	Transcription elongation factor, GreA/GreB, C-term
AM341_RS15110	PF03449	Transcription elongation factor, N-terminal
AM341_RS15120	PF00072	Response regulator receiver domain
AM341_RS15120	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS15125	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS15125	PF00672	HAMP domain
AM341_RS15125	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS15130	PF01293	Phosphoenolpyruvate carboxykinase
AM341_RS15140	PF13687	AM341_RS15140
AM341_RS15145	PF01430	Hsp33 protein
AM341_RS15150	PF01479	S4 domain
AM341_RS15155	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS15160	PF07095	Intracellular growth attenuator protein IgaA
AM341_RS15165	PF00293	NUDIX domain
AM341_RS15170	PF00905	Penicillin binding protein transpeptidase domain
AM341_RS15170	PF00912	Transglycosylase
AM341_RS15170	PF17092	AM341_RS15170
AM341_RS15180	PF05137	AM341_RS15180
AM341_RS15190	PF10748	AM341_RS15190
AM341_RS15195	PF00263	AM341_RS15195
AM341_RS15195	PF03958	Bacterial type II/III secretion system short domain
AM341_RS15200	PF01202	Shikimate kinase
AM341_RS15205	PF01761	3-dehydroquinate synthase
AM341_RS15210	PF05036	Sporulation related domain
AM341_RS15215	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AM341_RS15220	PF00834	Ribulose-phosphate 3 epimerase family
AM341_RS15225	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS15230	PF00579	tRNA synthetases class I (W and Y)
AM341_RS15240	PF14502	Helix-turn-helix domain
AM341_RS15240	PF14503	YhfZ C-terminal domain
AM341_RS15250	PF01168	Alanine racemase, N-terminal domain
AM341_RS15255	PF01676	Metalloenzyme superfamily
AM341_RS15260	PF02126	Phosphotriesterase family
AM341_RS15265	PF10941	AM341_RS15265
AM341_RS15270	PF10797	AM341_RS15270
AM341_RS15275	PF00155	Aminotransferase class I and II
AM341_RS15280	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS15280	PF07702	UTRA domain
AM341_RS15285	PF00294	pfkB family carbohydrate kinase
AM341_RS15290	PF01261	Xylose isomerase-like TIM barrel
AM341_RS15300	PF01380	SIS domain
AM341_RS15305	PF13520	Amino acid permease
AM341_RS15310	PF13978	AM341_RS15310
AM341_RS15315	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AM341_RS15315	PF10414	Sirohaem synthase dimerisation region
AM341_RS15315	PF13241	Putative NAD(P)-binding
AM341_RS15315	PF14824	Sirohaem biosynthesis protein central
AM341_RS15320	PF01226	Formate/nitrite transporter
AM341_RS15325	PF13806	Rieske-like [2Fe-2S] domain
AM341_RS15330	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AM341_RS15330	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AM341_RS15330	PF04324	BFD-like [2Fe-2S] binding domain
AM341_RS15330	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS15335	PF07690	Major Facilitator Superfamily
AM341_RS15340	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AM341_RS15345	PF10832	AM341_RS15345
AM341_RS15350	PF02661	Fic/DOC family
AM341_RS15355	PF00117	Glutamine amidotransferase class-I
AM341_RS15360	PF00202	Aminotransferase class-III
AM341_RS15365	PF12805	AM341_RS15365
AM341_RS15365	PF13515	AM341_RS15365
AM341_RS15370	PF00027	Cyclic nucleotide-binding domain
AM341_RS15370	PF00325	Bacterial regulatory proteins, crp family
AM341_RS15380	PF02566	OsmC-like protein
AM341_RS15385	PF00485	Phosphoribulokinase / Uridine kinase family
AM341_RS15390	PF06794	Uncharacterised protein family (UPF0270)
AM341_RS15395	PF00561	alpha/beta hydrolase fold
AM341_RS15400	PF00005	ABC transporter
AM341_RS15400	PF12848	ABC transporter
AM341_RS15410	PF02525	Flavodoxin-like fold
AM341_RS15415	PF00999	Sodium/hydrogen exchanger family
AM341_RS15415	PF02254	TrkA-N domain
AM341_RS15420	PF09526	AM341_RS15420
AM341_RS15425	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AM341_RS15430	PF04102	SlyX
AM341_RS15435	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AM341_RS15435	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AM341_RS15440	PF08348	AM341_RS15440
AM341_RS15440	PF13309	AM341_RS15440
AM341_RS15445	PF02635	DsrE/DsrF-like family
AM341_RS15450	PF02635	DsrE/DsrF-like family
AM341_RS15455	PF04077	DsrH like protein
AM341_RS15460	PF00164	Ribosomal protein S12/S23
AM341_RS15465	PF00177	Ribosomal protein S7p/S5e
AM341_RS15470	PF00009	Elongation factor Tu GTP binding domain
AM341_RS15470	PF00679	Elongation factor G C-terminus
AM341_RS15470	PF03144	Elongation factor Tu domain 2
AM341_RS15470	PF03764	Elongation factor G, domain IV
AM341_RS15470	PF14492	Elongation Factor G, domain II
AM341_RS15475	PF00009	Elongation factor Tu GTP binding domain
AM341_RS15475	PF03143	Elongation factor Tu C-terminal domain
AM341_RS15475	PF03144	Elongation factor Tu domain 2
AM341_RS15485	PF02839	Carbohydrate binding domain
AM341_RS15490	PF04324	BFD-like [2Fe-2S] binding domain
AM341_RS15495	PF00210	Ferritin-like domain
AM341_RS15500	PF01478	Type IV leader peptidase family
AM341_RS15505	PF04612	Type II secretion system (T2SS), protein M
AM341_RS15510	PF05134	Type II secretion system (T2SS), protein L
AM341_RS15510	PF12693	GspL periplasmic domain
AM341_RS15520	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS15525	PF02501	Type II secretion system (T2SS), protein I
AM341_RS15525	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS15530	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS15530	PF12019	Type II transport protein GspH
AM341_RS15535	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS15535	PF08334	Type II secretion system (T2SS), protein G
AM341_RS15540	PF00482	Type II secretion system (T2SS), protein F
AM341_RS15545	PF00437	Type II/IV secretion system protein
AM341_RS15550	PF00263	AM341_RS15550
AM341_RS15550	PF03958	Bacterial type II/III secretion system short domain
AM341_RS15555	PF11356	Type IV pilus biogenesis
AM341_RS15560	PF01471	Putative peptidoglycan binding domain
AM341_RS15560	PF13401	AAA domain
AM341_RS15575	PF00338	Ribosomal protein S10p/S20e
AM341_RS15580	PF00297	Ribosomal protein L3
AM341_RS15585	PF00573	Ribosomal protein L4/L1 family
AM341_RS15590	PF00276	Ribosomal protein L23
AM341_RS15595	PF00181	Ribosomal Proteins L2, RNA binding domain
AM341_RS15595	PF03947	Ribosomal Proteins L2, C-terminal domain
AM341_RS15600	PF00203	Ribosomal protein S19
AM341_RS15605	PF00237	Ribosomal protein L22p/L17e
AM341_RS15610	PF00189	Ribosomal protein S3, C-terminal domain
AM341_RS15610	PF07650	KH domain
AM341_RS15615	PF00252	Ribosomal protein L16p/L10e
AM341_RS15620	PF00831	Ribosomal L29 protein
AM341_RS15625	PF00366	Ribosomal protein S17
AM341_RS15630	PF00238	Ribosomal protein L14p/L23e
AM341_RS15635	PF00467	KOW motif
AM341_RS15635	PF17136	AM341_RS15635
AM341_RS15640	PF00281	Ribosomal protein L5
AM341_RS15640	PF00673	ribosomal L5P family C-terminus
AM341_RS15645	PF00253	Ribosomal protein S14p/S29e
AM341_RS15650	PF00410	Ribosomal protein S8
AM341_RS15655	PF00347	Ribosomal protein L6
AM341_RS15660	PF00861	Ribosomal L18p/L5e family
AM341_RS15665	PF00333	Ribosomal protein S5, N-terminal domain
AM341_RS15665	PF03719	Ribosomal protein S5, C-terminal domain
AM341_RS15670	PF00327	Ribosomal protein L30p/L7e
AM341_RS15675	PF00828	Ribosomal protein L18e/L15
AM341_RS15680	PF00344	SecY translocase
AM341_RS15685	PF00444	Ribosomal protein L36
AM341_RS15690	PF00416	Ribosomal protein S13/S18
AM341_RS15695	PF00411	Ribosomal protein S11
AM341_RS15700	PF00163	Ribosomal protein S4/S9 N-terminal domain
AM341_RS15700	PF01479	S4 domain
AM341_RS15705	PF01000	RNA polymerase Rpb3/RpoA insert domain
AM341_RS15705	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AM341_RS15705	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AM341_RS15710	PF01196	Ribosomal protein L17
AM341_RS15715	PF09350	AM341_RS15715
AM341_RS15720	PF13411	MerR HTH family regulatory protein
AM341_RS15725	PF03889	AM341_RS15725
AM341_RS15730	PF01741	Large-conductance mechanosensitive channel, MscL
AM341_RS15735	PF02080	TrkA-C domain
AM341_RS15735	PF02254	TrkA-N domain
AM341_RS15740	PF01029	NusB family
AM341_RS15740	PF01189	NOL1/NOP2/sun family
AM341_RS15745	PF00551	Formyl transferase
AM341_RS15745	PF02911	Formyl transferase, C-terminal domain
AM341_RS15750	PF01327	Polypeptide deformylase
AM341_RS15755	PF02481	DNA recombination-mediator protein A
AM341_RS15760	PF04361	AM341_RS15760
AM341_RS15765	PF01396	AM341_RS15765
AM341_RS15770	PF01300	Telomere recombination
AM341_RS15775	PF01488	Shikimate / quinate 5-dehydrogenase
AM341_RS15775	PF08501	Shikimate dehydrogenase substrate binding domain
AM341_RS15780	PF07369	Protein of unknown function (DUF1488)
AM341_RS15785	PF00132	Bacterial transferase hexapeptide (six repeats)
AM341_RS15825	PF00005	ABC transporter
AM341_RS15830	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS15835	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS15840	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS15860	PF00873	AcrB/AcrD/AcrF family
AM341_RS15870	PF13737	AM341_RS15870
AM341_RS15875	PF01555	DNA methylase
AM341_RS15880	PF02954	Bacterial regulatory protein, Fis family
AM341_RS15885	PF01207	Dihydrouridine synthase (Dus)
AM341_RS15890	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
AM341_RS15895	PF00474	Sodium:solute symporter family
AM341_RS15900	PF06196	AM341_RS15900
AM341_RS15905	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
AM341_RS15905	PF02785	Biotin carboxylase C-terminal domain
AM341_RS15905	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AM341_RS15910	PF00364	Biotin-requiring enzyme
AM341_RS15920	PF00107	Zinc-binding dehydrogenase
AM341_RS15920	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS15925	PF00563	EAL domain
AM341_RS15925	PF00990	GGDEF domain
AM341_RS15925	PF17157	AM341_RS15925
AM341_RS15940	PF06723	MreB/Mbl protein
AM341_RS15945	PF04085	rod shape-determining protein MreC
AM341_RS15950	PF04093	AM341_RS15950
AM341_RS15955	PF02545	Maf-like protein
AM341_RS15960	PF00575	S1 RNA binding domain
AM341_RS15960	PF10150	Ribonuclease E/G family
AM341_RS15965	PF13116	AM341_RS15965
AM341_RS15965	PF13502	AM341_RS15965
AM341_RS15970	PF01523	Putative modulator of DNA gyrase
AM341_RS15975	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS15975	PF03466	LysR substrate binding domain
AM341_RS15980	PF07869	AM341_RS15980
AM341_RS15985	PF13437	HlyD family secretion protein
AM341_RS15985	PF13533	Biotin-lipoyl like
AM341_RS15990	PF04632	AM341_RS15990
AM341_RS15995	PF01337	Barstar (barnase inhibitor)
AM341_RS16000	PF07338	Protein of unknown function (DUF1471)
AM341_RS16005	PF01316	Arginine repressor, DNA binding domain
AM341_RS16005	PF02863	Arginine repressor, C-terminal domain
AM341_RS16010	PF00056	lactate/malate dehydrogenase, NAD binding domain
AM341_RS16010	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AM341_RS16015	PF13180	PDZ domain
AM341_RS16015	PF13365	Trypsin-like peptidase domain
AM341_RS16020	PF00595	PDZ domain (Also known as DHR or GLGF)
AM341_RS16020	PF13180	PDZ domain
AM341_RS16020	PF13365	Trypsin-like peptidase domain
AM341_RS16025	PF06295	AM341_RS16025
AM341_RS16030	PF03969	AFG1-like ATPase
AM341_RS16035	PF00572	Ribosomal protein L13
AM341_RS16040	PF00380	Ribosomal protein S9/S16
AM341_RS16050	PF00043	Glutathione S-transferase, C-terminal domain
AM341_RS16050	PF02798	Glutathione S-transferase, N-terminal domain
AM341_RS16055	PF04386	Stringent starvation protein B
AM341_RS16060	PF03606	AM341_RS16060
AM341_RS16070	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS16070	PF07729	FCD domain
AM341_RS16075	PF00701	Dihydrodipicolinate synthetase family
AM341_RS16080	PF07690	Major Facilitator Superfamily
AM341_RS16085	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
AM341_RS16090	PF00480	ROK family
AM341_RS16095	PF04074	Domain of unknown function (DUF386)
AM341_RS16100	PF06250	AM341_RS16100
AM341_RS16115	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AM341_RS16115	PF08388	AM341_RS16115
AM341_RS16130	PF06551	AM341_RS16130
AM341_RS16140	PF00577	Outer membrane usher protein
AM341_RS16140	PF13953	PapC C-terminal domain
AM341_RS16140	PF13954	PapC N-terminal domain
AM341_RS16145	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS16150	PF06551	AM341_RS16150
AM341_RS16160	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS16160	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AM341_RS16165	PF00310	Glutamine amidotransferases class-II
AM341_RS16165	PF01493	GXGXG motif
AM341_RS16165	PF01645	Conserved region in glutamate synthase
AM341_RS16165	PF04898	Glutamate synthase central domain
AM341_RS16180	PF04055	Radical SAM superfamily
AM341_RS16180	PF16199	AM341_RS16180
AM341_RS16185	PF00072	Response regulator receiver domain
AM341_RS16185	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS16185	PF00989	PAS fold
AM341_RS16185	PF01627	Hpt domain
AM341_RS16185	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS16195	PF00912	Transglycosylase
AM341_RS16200	PF10707	AM341_RS16200
AM341_RS16205	PF00381	PTS HPr component phosphorylation site
AM341_RS16210	PF03668	AM341_RS16210
AM341_RS16215	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS16220	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AM341_RS16225	PF00309	AM341_RS16225
AM341_RS16225	PF04552	Sigma-54, DNA binding domain
AM341_RS16225	PF04963	Sigma-54 factor, core binding domain
AM341_RS16230	PF00005	ABC transporter
AM341_RS16230	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AM341_RS16235	PF03968	OstA-like protein
AM341_RS16240	PF06835	Lipopolysaccharide-assembly, LptC-related
AM341_RS16245	PF08282	haloacid dehalogenase-like hydrolase
AM341_RS16250	PF00571	CBS domain
AM341_RS16250	PF01380	SIS domain
AM341_RS16255	PF01699	Sodium/calcium exchanger protein
AM341_RS16260	PF00005	ABC transporter
AM341_RS16265	PF02405	AM341_RS16265
AM341_RS16270	PF02470	AM341_RS16270
AM341_RS16275	PF05494	Toluene tolerance, Ttg2
AM341_RS16280	PF13466	STAS domain
AM341_RS16285	PF01722	BolA-like protein
AM341_RS16290	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AM341_RS16295	PF13693	Winged helix-turn-helix DNA-binding
AM341_RS16300	PF00348	Polyprenyl synthetase
AM341_RS16305	PF00829	Ribosomal prokaryotic L21 protein
AM341_RS16310	PF01016	Ribosomal L27 protein
AM341_RS16315	PF00892	EamA-like transporter family
AM341_RS16320	PF01018	GTP1/OBG
AM341_RS16320	PF01926	50S ribosome-binding GTPase
AM341_RS16325	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
AM341_RS16330	PF01272	Transcription elongation factor, GreA/GreB, C-term
AM341_RS16330	PF03449	Transcription elongation factor, N-terminal
AM341_RS16335	PF01985	CRS1 / YhbY (CRM) domain
AM341_RS16340	PF01728	FtsJ-like methyltransferase
AM341_RS16345	PF00004	ATPase family associated with various cellular activities (AAA)
AM341_RS16345	PF01434	Peptidase family M41
AM341_RS16345	PF06480	FtsH Extracellular
AM341_RS16350	PF00809	Pterin binding enzyme
AM341_RS16355	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AM341_RS16355	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AM341_RS16355	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AM341_RS16355	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AM341_RS16360	PF03840	Preprotein translocase SecG subunit
AM341_RS16370	PF00884	Sulfatase
AM341_RS16375	PF00764	Arginosuccinate synthase
AM341_RS16385	PF02576	Uncharacterised BCR, YhbC family COG0779
AM341_RS16385	PF17384	AM341_RS16385
AM341_RS16390	PF00575	S1 RNA binding domain
AM341_RS16390	PF08529	NusA N-terminal domain
AM341_RS16390	PF13184	NusA-like KH domain
AM341_RS16390	PF14520	Helix-hairpin-helix domain
AM341_RS16395	PF00009	Elongation factor Tu GTP binding domain
AM341_RS16395	PF04760	Translation initiation factor IF-2, N-terminal region
AM341_RS16395	PF08364	AM341_RS16395
AM341_RS16395	PF11987	Translation-initiation factor 2
AM341_RS16400	PF02033	Ribosome-binding factor A
AM341_RS16405	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AM341_RS16405	PF09157	Pseudouridine synthase II TruB, C-terminal
AM341_RS16405	PF16198	AM341_RS16405
AM341_RS16410	PF00312	Ribosomal protein S15
AM341_RS16415	PF00013	KH domain
AM341_RS16415	PF00575	S1 RNA binding domain
AM341_RS16415	PF01138	3' exoribonuclease family, domain 1
AM341_RS16415	PF03725	3' exoribonuclease family, domain 2
AM341_RS16415	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AM341_RS16420	PF07719	Tetratricopeptide repeat
AM341_RS16420	PF13181	Tetratricopeptide repeat
AM341_RS16430	PF00270	DEAD/DEAH box helicase
AM341_RS16430	PF00271	Helicase conserved C-terminal domain
AM341_RS16430	PF03880	DbpA RNA binding domain
AM341_RS16430	PF12343	AM341_RS16430
AM341_RS16435	PF03222	Tryptophan/tyrosine permease family
AM341_RS16440	PF00296	Luciferase-like monooxygenase
AM341_RS16445	PF01136	AM341_RS16445
AM341_RS16450	PF01136	AM341_RS16450
AM341_RS16455	PF02036	SCP-2 sterol transfer family
AM341_RS16460	PF13508	Acetyltransferase (GNAT) domain
AM341_RS16465	PF01541	GIY-YIG catalytic domain
AM341_RS16475	PF01965	DJ-1/PfpI family
AM341_RS16480	PF13460	NADH(P)-binding
AM341_RS16485	PF03773	AM341_RS16485
AM341_RS16490	PF04972	BON domain
AM341_RS16495	PF13580	SIS domain
AM341_RS16500	PF02021	Uncharacterised protein family UPF0102
AM341_RS16505	PF04348	LppC putative lipoprotein
AM341_RS16510	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AM341_RS16515	PF00419	Fimbrial protein
AM341_RS16520	PF00577	Outer membrane usher protein
AM341_RS16520	PF13953	PapC C-terminal domain
AM341_RS16520	PF13954	PapC N-terminal domain
AM341_RS16525	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS16525	PF02753	Pili assembly chaperone PapD, C-terminal domain
AM341_RS16530	PF00419	Fimbrial protein
AM341_RS16535	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AM341_RS16540	PF03613	AM341_RS16540
AM341_RS16545	PF03609	AM341_RS16545
AM341_RS16560	PF03830	PTS system sorbose subfamily IIB component
AM341_RS16565	PF01116	Fructose-bisphosphate aldolase class-II
AM341_RS16570	PF01380	SIS domain
AM341_RS16575	PF01979	Amidohydrolase family
AM341_RS16580	PF03610	PTS system fructose IIA component
AM341_RS16585	PF03613	AM341_RS16585
AM341_RS16590	PF03609	AM341_RS16590
AM341_RS16595	PF03830	PTS system sorbose subfamily IIB component
AM341_RS16600	PF08013	Tagatose 6 phosphate kinase
AM341_RS16610	PF00455	AM341_RS16610
AM341_RS16610	PF08220	DeoR-like helix-turn-helix domain
AM341_RS16615	PF11663	AM341_RS16615
AM341_RS16620	PF15937	AM341_RS16620
AM341_RS16625	PF04295	AM341_RS16625
AM341_RS16625	PF08666	SAF domain
AM341_RS16630	PF07690	Major Facilitator Superfamily
AM341_RS16635	PF03328	HpcH/HpaI aldolase/citrate lyase family
AM341_RS16640	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AM341_RS16640	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AM341_RS16645	PF02595	Glycerate kinase family
AM341_RS16670	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS16670	PF03466	LysR substrate binding domain
AM341_RS16680	PF00291	Pyridoxal-phosphate dependent enzyme
AM341_RS16685	PF03222	Tryptophan/tyrosine permease family
AM341_RS16690	PF00871	Acetokinase family
AM341_RS16695	PF01228	Glycine radical
AM341_RS16695	PF02901	Pyruvate formate lyase
AM341_RS16700	PF01042	Endoribonuclease L-PSP
AM341_RS16705	PF03313	AM341_RS16705
AM341_RS16705	PF03315	Serine dehydratase beta chain
AM341_RS16720	PF03313	AM341_RS16720
AM341_RS16730	PF02678	Pirin
AM341_RS16735	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS16735	PF03466	LysR substrate binding domain
AM341_RS16745	PF05656	AM341_RS16745
AM341_RS16765	PF05656	AM341_RS16765
AM341_RS16770	PF13409	Glutathione S-transferase, N-terminal domain
AM341_RS16770	PF13410	Glutathione S-transferase, C-terminal domain
AM341_RS16775	PF07681	AM341_RS16775
AM341_RS16780	PF13997	AM341_RS16780
AM341_RS16785	PF07332	AM341_RS16785
AM341_RS16790	PF05957	AM341_RS16790
AM341_RS16795	PF06476	AM341_RS16795
AM341_RS16800	PF13721	SecD export protein N-terminal TM region
AM341_RS16805	PF09335	AM341_RS16805
AM341_RS16810	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS16810	PF07729	FCD domain
AM341_RS16815	PF07690	Major Facilitator Superfamily
AM341_RS16820	PF02614	Glucuronate isomerase
AM341_RS16825	PF04295	AM341_RS16825
AM341_RS16825	PF08666	SAF domain
AM341_RS16830	PF10688	AM341_RS16830
AM341_RS16835	PF00375	Sodium:dicarboxylate symporter family
AM341_RS16840	PF03741	AM341_RS16840
AM341_RS16845	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AM341_RS16850	PF02698	DUF218 domain
AM341_RS16855	PF01863	Protein of unknown function DUF45
AM341_RS16860	PF05175	Methyltransferase small domain
AM341_RS16870	PF09907	AM341_RS16870
AM341_RS16875	PF01381	Helix-turn-helix
AM341_RS16880	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AM341_RS16880	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS16885	PF01204	Trehalase
AM341_RS16895	PF13520	Amino acid permease
AM341_RS16900	PF04074	Domain of unknown function (DUF386)
AM341_RS16905	PF00703	Glycosyl hydrolases family 2
AM341_RS16905	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AM341_RS16905	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AM341_RS16905	PF02929	Beta galactosidase small chain
AM341_RS16905	PF16353	AM341_RS16905
AM341_RS16910	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS16910	PF13377	Periplasmic binding protein-like domain
AM341_RS16920	PF01588	Putative tRNA binding domain
AM341_RS16925	PF00202	Aminotransferase class-III
AM341_RS16935	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AM341_RS16935	PF08447	PAS fold
AM341_RS16940	PF03551	Transcriptional regulator PadR-like family
AM341_RS16945	PF04954	Siderophore-interacting protein
AM341_RS16945	PF08021	Siderophore-interacting FAD-binding domain
AM341_RS16955	PF03167	Uracil DNA glycosylase superfamily
AM341_RS16960	PF00140	Sigma-70 factor, region 1
AM341_RS16960	PF03979	Sigma-70 factor, region 1
AM341_RS16960	PF04539	Sigma-70 region 3
AM341_RS16960	PF04542	Sigma-70 region 2
AM341_RS16960	PF04545	Sigma-70, region 4
AM341_RS16960	PF04546	Sigma-70, non-essential region
AM341_RS16970	PF01807	CHC2 zinc finger
AM341_RS16970	PF08275	DNA primase catalytic core, N-terminal domain
AM341_RS16970	PF08278	DNA primase DnaG DnaB-binding
AM341_RS16970	PF10410	DnaB-helicase binding domain of primase
AM341_RS16970	PF13155	Toprim-like
AM341_RS16975	PF01165	Ribosomal protein S21
AM341_RS16985	PF00814	Glycoprotease family
AM341_RS16990	PF00939	Sodium:sulfate symporter transmembrane region
AM341_RS16995	PF05683	Fumarase C-terminus
AM341_RS17000	PF05681	AM341_RS17000
AM341_RS17010	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS17010	PF03466	LysR substrate binding domain
AM341_RS17015	PF02660	AM341_RS17015
AM341_RS17020	PF02152	Dihydroneopterin aldolase
AM341_RS17025	PF02673	AM341_RS17025
AM341_RS17030	PF01743	Poly A polymerase head domain
AM341_RS17030	PF01966	HD domain
AM341_RS17030	PF12627	Probable RNA and SrmB- binding site of polymerase A
AM341_RS17035	PF08239	Bacterial SH3 domain
AM341_RS17045	PF01928	CYTH domain
AM341_RS17050	PF03710	Glutamate-ammonia ligase adenylyltransferase
AM341_RS17050	PF08335	GlnD PII-uridylyltransferase
AM341_RS17055	PF00294	pfkB family carbohydrate kinase
AM341_RS17055	PF01467	Cytidylyltransferase
AM341_RS17060	PF13956	AM341_RS17060
AM341_RS17070	PF01145	SPFH domain / Band 7 family
AM341_RS17070	PF15975	AM341_RS17070
AM341_RS17075	PF07290	AM341_RS17075
AM341_RS17080	PF08971	Glycogen synthesis protein
AM341_RS17090	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS17090	PF02753	Pili assembly chaperone PapD, C-terminal domain
AM341_RS17095	PF00577	Outer membrane usher protein
AM341_RS17095	PF13953	PapC C-terminal domain
AM341_RS17095	PF13954	PapC N-terminal domain
AM341_RS17100	PF00419	Fimbrial protein
AM341_RS17105	PF04380	AM341_RS17105
AM341_RS17110	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AM341_RS17115	PF13260	AM341_RS17115
AM341_RS17120	PF02535	AM341_RS17120
AM341_RS17125	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
AM341_RS17130	PF03738	Glutathionylspermidine synthase preATP-grasp
AM341_RS17135	PF06693	AM341_RS17135
AM341_RS17145	PF02321	Outer membrane efflux protein
AM341_RS17150	PF00293	NUDIX domain
AM341_RS17155	PF06853	AM341_RS17155
AM341_RS17160	PF00149	Calcineurin-like phosphoesterase
AM341_RS17165	PF05728	Uncharacterised protein family (UPF0227)
AM341_RS17170	PF00204	DNA gyrase B
AM341_RS17170	PF00986	DNA gyrase B subunit, carboxyl terminus
AM341_RS17170	PF01751	Toprim domain
AM341_RS17170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS17175	PF03992	Antibiotic biosynthesis monooxygenase
AM341_RS17180	PF02525	Flavodoxin-like fold
AM341_RS17190	PF10840	AM341_RS17190
AM341_RS17195	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS17195	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS17195	PF08521	AM341_RS17195
AM341_RS17200	PF00072	Response regulator receiver domain
AM341_RS17200	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS17205	PF04076	Bacterial OB fold (BOF) protein
AM341_RS17210	PF06445	GyrI-like small molecule binding domain
AM341_RS17215	PF15723	AM341_RS17215
AM341_RS17220	PF15731	AM341_RS17220
AM341_RS17225	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS17230	PF00521	DNA gyrase/topoisomerase IV, subunit A
AM341_RS17230	PF03989	DNA gyrase C-terminal domain, beta-propeller
AM341_RS17235	PF01553	Acyltransferase
AM341_RS17240	PF00394	Multicopper oxidase
AM341_RS17240	PF07731	Multicopper oxidase
AM341_RS17240	PF07732	Multicopper oxidase
AM341_RS17245	PF04055	Radical SAM superfamily
AM341_RS17245	PF08497	AM341_RS17245
AM341_RS17245	PF11842	AM341_RS17245
AM341_RS17250	PF04728	Lipoprotein leucine-zipper
AM341_RS17255	PF12883	Protein of unknown function (DUF3828)
AM341_RS17260	PF00248	Aldo/keto reductase family
AM341_RS17265	PF00465	Iron-containing alcohol dehydrogenase
AM341_RS17270	PF06719	AM341_RS17270
AM341_RS17270	PF12833	Helix-turn-helix domain
AM341_RS17275	PF09335	AM341_RS17275
AM341_RS17280	PF01053	Cys/Met metabolism PLP-dependent enzyme
AM341_RS17290	PF01618	AM341_RS17290
AM341_RS17295	PF02472	Biopolymer transport protein ExbD/TolR
AM341_RS17300	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS17305	PF03350	AM341_RS17305
AM341_RS17310	PF00248	Aldo/keto reductase family
AM341_RS17325	PF11115	AM341_RS17325
AM341_RS17335	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AM341_RS17335	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
AM341_RS17340	PF13247	4Fe-4S dicluster domain
AM341_RS17345	PF03916	AM341_RS17345
AM341_RS17350	PF00374	Nickel-dependent hydrogenase
AM341_RS17355	PF01750	Hydrogenase maturation protease
AM341_RS17360	PF11939	Protein of unknown function (DUF3457)
AM341_RS17365	PF01155	Hydrogenase expression/synthesis hypA family
AM341_RS17370	PF01455	HupF/HypC family
AM341_RS17375	PF02798	Glutathione S-transferase, N-terminal domain
AM341_RS17375	PF13410	Glutathione S-transferase, C-terminal domain
AM341_RS17380	PF03738	Glutathionylspermidine synthase preATP-grasp
AM341_RS17380	PF05257	CHAP domain
AM341_RS17385	PF01384	AM341_RS17385
AM341_RS17405	PF01943	AM341_RS17405
AM341_RS17415	PF09695	AM341_RS17415
AM341_RS17420	PF03739	AM341_RS17420
AM341_RS17425	PF03739	AM341_RS17425
AM341_RS17430	PF00155	Aminotransferase class I and II
AM341_RS17435	PF00550	Phosphopantetheine attachment site
AM341_RS17440	PF01370	NAD dependent epimerase/dehydratase family
AM341_RS17445	PF00501	AMP-binding enzyme
AM341_RS17455	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS17455	PF07729	FCD domain
AM341_RS17460	PF01565	FAD binding domain
AM341_RS17460	PF02913	FAD linked oxidases, C-terminal domain
AM341_RS17465	PF01565	FAD binding domain
AM341_RS17470	PF02754	AM341_RS17470
AM341_RS17470	PF13183	4Fe-4S dicluster domain
AM341_RS17475	PF03928	Domain of unknown function (DUF336)
AM341_RS17480	PF01274	Malate synthase
AM341_RS17485	PF02652	AM341_RS17485
AM341_RS17495	PF13322	AM341_RS17495
AM341_RS17495	PF13402	Peptidase M60-like family
AM341_RS17495	PF17291	AM341_RS17495
AM341_RS17500	PF01478	Type IV leader peptidase family
AM341_RS17500	PF06750	AM341_RS17500
AM341_RS17505	PF16549	AM341_RS17505
AM341_RS17510	PF11356	Type IV pilus biogenesis
AM341_RS17515	PF00263	AM341_RS17515
AM341_RS17515	PF03958	Bacterial type II/III secretion system short domain
AM341_RS17525	PF00482	Type II secretion system (T2SS), protein F
AM341_RS17530	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS17530	PF08334	Type II secretion system (T2SS), protein G
AM341_RS17535	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS17535	PF12019	Type II transport protein GspH
AM341_RS17540	PF02501	Type II secretion system (T2SS), protein I
AM341_RS17540	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS17545	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS17545	PF11612	Type II secretion system (T2SS), protein J
AM341_RS17550	PF03934	Type II secretion system (T2SS), protein K
AM341_RS17555	PF05134	Type II secretion system (T2SS), protein L
AM341_RS17555	PF12693	GspL periplasmic domain
AM341_RS17560	PF04612	Type II secretion system (T2SS), protein M
AM341_RS17565	PF13708	AM341_RS17565
AM341_RS17570	PF06117	AM341_RS17570
AM341_RS17580	PF06755	AM341_RS17580
AM341_RS17585	PF06154	YagB/YeeU/YfjZ family
AM341_RS17590	PF06174	AM341_RS17590
AM341_RS17595	PF04002	RadC-like JAB domain
AM341_RS17600	PF03230	Antirestriction protein
AM341_RS17605	PF06067	AM341_RS17605
AM341_RS17610	PF06006	Bacterial protein of unknown function (DUF905)
AM341_RS17620	PF08279	HTH domain
AM341_RS17620	PF13280	AM341_RS17620
AM341_RS17625	PF01926	50S ribosome-binding GTPase
AM341_RS17640	PF11726	AM341_RS17640
AM341_RS17650	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AM341_RS17670	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS17685	PF00936	BMC domain
AM341_RS17690	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AM341_RS17690	PF02772	S-adenosylmethionine synthetase, central domain
AM341_RS17690	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AM341_RS17695	PF00072	Response regulator receiver domain
AM341_RS17695	PF12833	Helix-turn-helix domain
AM341_RS17700	PF06580	AM341_RS17700
AM341_RS17700	PF10114	AM341_RS17700
AM341_RS17710	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AM341_RS17710	PF08388	AM341_RS17710
AM341_RS17730	PF04055	Radical SAM superfamily
AM341_RS17730	PF13353	4Fe-4S single cluster domain
AM341_RS17735	PF01228	Glycine radical
AM341_RS17735	PF02901	Pyruvate formate lyase
AM341_RS17740	PF01965	DJ-1/PfpI family
AM341_RS17745	PF00936	BMC domain
AM341_RS17750	PF00171	Aldehyde dehydrogenase family
AM341_RS17755	PF00936	BMC domain
AM341_RS17760	PF00936	BMC domain
AM341_RS17765	PF00871	Acetokinase family
AM341_RS17770	PF03928	Domain of unknown function (DUF336)
AM341_RS17775	PF03319	Ethanolamine utilisation protein EutN/carboxysome
AM341_RS17785	PF06723	MreB/Mbl protein
AM341_RS17790	PF06130	AM341_RS17790
AM341_RS17795	PF00465	Iron-containing alcohol dehydrogenase
AM341_RS17810	PF13973	AM341_RS17810
AM341_RS17815	PF08479	POTRA domain, ShlB-type
AM341_RS17820	PF12486	AM341_RS17820
AM341_RS17835	PF07693	AM341_RS17835
AM341_RS17850	PF01026	TatD related DNase
AM341_RS17880	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS17895	PF13520	Amino acid permease
AM341_RS17900	PF01276	Orn/Lys/Arg decarboxylase, major domain
AM341_RS17900	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AM341_RS17900	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AM341_RS17905	PF13520	Amino acid permease
AM341_RS17920	PF01047	MarR family
AM341_RS17935	PF03050	AM341_RS17935
AM341_RS17935	PF13005	AM341_RS17935
AM341_RS17935	PF13007	AM341_RS17935
AM341_RS17935	PF13817	AM341_RS17935
AM341_RS17940	PF05717	AM341_RS17940
AM341_RS17945	PF01527	Transposase
AM341_RS17975	PF04474	AM341_RS17975
AM341_RS17985	PF01276	Orn/Lys/Arg decarboxylase, major domain
AM341_RS17985	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AM341_RS17985	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AM341_RS17990	PF03825	AM341_RS17990
AM341_RS17995	PF01464	Transglycosylase SLT domain
AM341_RS17995	PF11873	Domain of unknown function (DUF3393)
AM341_RS18000	PF04362	Bacterial Fe(2+) trafficking
AM341_RS18005	PF00633	Helix-hairpin-helix motif
AM341_RS18005	PF00730	HhH-GPD superfamily base excision DNA repair protein
AM341_RS18005	PF10576	Iron-sulfur binding domain of endonuclease III
AM341_RS18005	PF14815	NUDIX domain
AM341_RS18015	PF02390	Putative methyltransferase
AM341_RS18020	PF04320	AM341_RS18020
AM341_RS18025	PF11101	AM341_RS18025
AM341_RS18030	PF00710	Asparaginase
AM341_RS18035	PF06717	AM341_RS18035
AM341_RS18040	PF04055	Radical SAM superfamily
AM341_RS18040	PF06969	HemN C-terminal domain
AM341_RS18045	PF01725	Ham1 family
AM341_RS18050	PF02594	Uncharacterised ACR, YggU family COG1872
AM341_RS18055	PF02325	AM341_RS18055
AM341_RS18060	PF01168	Alanine racemase, N-terminal domain
AM341_RS18065	PF00437	Type II/IV secretion system protein
AM341_RS18070	PF03652	Uncharacterised protein family (UPF0081)
AM341_RS18075	PF02622	Uncharacterized ACR, COG1678
AM341_RS18080	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AM341_RS18080	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AM341_RS18085	PF04452	RNA methyltransferase
AM341_RS18090	PF04231	Endonuclease I
AM341_RS18095	PF10263	AM341_RS18095
AM341_RS18095	PF17283	AM341_RS18095
AM341_RS18100	PF00083	Sugar (and other) transporter
AM341_RS18105	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AM341_RS18105	PF02772	S-adenosylmethionine synthetase, central domain
AM341_RS18105	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AM341_RS18110	PF10885	AM341_RS18110
AM341_RS18115	PF17430	AM341_RS18115
AM341_RS18120	PF11036	AM341_RS18120
AM341_RS18125	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AM341_RS18130	PF00491	Arginase family
AM341_RS18135	PF01435	Peptidase family M48
AM341_RS18140	PF00456	Transketolase, thiamine diphosphate binding domain
AM341_RS18140	PF02779	Transketolase, pyrimidine binding domain
AM341_RS18140	PF02780	Transketolase, C-terminal domain
AM341_RS18145	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS18150	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS18150	PF02378	Phosphotransferase system, EIIC
AM341_RS18155	PF00107	Zinc-binding dehydrogenase
AM341_RS18155	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS18160	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AM341_RS18165	PF05068	Mannitol repressor
AM341_RS18180	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM341_RS18180	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AM341_RS18185	PF00162	Phosphoglycerate kinase
AM341_RS18190	PF01116	Fructose-bisphosphate aldolase class-II
AM341_RS18200	PF00924	Mechanosensitive ion channel
AM341_RS18200	PF05552	Conserved TM helix
AM341_RS18205	PF01810	AM341_RS18205
AM341_RS18215	PF13737	AM341_RS18215
AM341_RS18220	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS18220	PF03466	LysR substrate binding domain
AM341_RS18225	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
AM341_RS18225	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
AM341_RS18230	PF00378	Enoyl-CoA hydratase/isomerase family
AM341_RS18235	PF03308	ArgK protein
AM341_RS18240	PF01642	Methylmalonyl-CoA mutase
AM341_RS18240	PF02310	B12 binding domain
AM341_RS18245	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS18245	PF03466	LysR substrate binding domain
AM341_RS18250	PF03466	LysR substrate binding domain
AM341_RS18255	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AM341_RS18260	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AM341_RS18260	PF01842	ACT domain
AM341_RS18260	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AM341_RS18270	PF13956	AM341_RS18270
AM341_RS18275	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AM341_RS18285	PF05164	Cell division protein ZapA
AM341_RS18295	PF03695	Uncharacterised protein family (UPF0149)
AM341_RS18300	PF00557	Metallopeptidase family M24
AM341_RS18300	PF05195	Aminopeptidase P, N-terminal domain
AM341_RS18305	PF01494	FAD binding domain
AM341_RS18310	PF01494	FAD binding domain
AM341_RS18315	PF01571	Aminomethyltransferase folate-binding domain
AM341_RS18315	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AM341_RS18320	PF01597	Glycine cleavage H-protein
AM341_RS18325	PF02347	Glycine cleavage system P-protein
AM341_RS18330	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS18335	PF00232	Glycosyl hydrolase family 1
AM341_RS18340	PF04266	ASCH domain
AM341_RS18345	PF03006	AM341_RS18345
AM341_RS18350	PF01571	Aminomethyltransferase folate-binding domain
AM341_RS18355	PF03937	Flavinator of succinate dehydrogenase
AM341_RS18360	PF07254	AM341_RS18360
AM341_RS18365	PF00258	Flavodoxin
AM341_RS18370	PF00589	Phage integrase family
AM341_RS18370	PF02899	Phage integrase, N-terminal SAM-like domain
AM341_RS18375	PF10411	Disulfide bond isomerase protein N-terminus
AM341_RS18375	PF13098	Thioredoxin-like domain
AM341_RS18380	PF01368	DHH family
AM341_RS18380	PF02272	DHHA1 domain
AM341_RS18390	PF00152	tRNA synthetases class II (D, K and N)
AM341_RS18390	PF01336	OB-fold nucleic acid binding domain
AM341_RS18395	PF00293	NUDIX domain
AM341_RS18405	PF00860	Permease family
AM341_RS18415	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS18415	PF13247	4Fe-4S dicluster domain
AM341_RS18415	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AM341_RS18420	PF13247	4Fe-4S dicluster domain
AM341_RS18425	PF00860	Permease family
AM341_RS18430	PF01979	Amidohydrolase family
AM341_RS18435	PF00860	Permease family
AM341_RS18440	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM341_RS18440	PF01799	[2Fe-2S] binding domain
AM341_RS18440	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
AM341_RS18445	PF00941	FAD binding domain in molybdopterin dehydrogenase
AM341_RS18445	PF03450	CO dehydrogenase flavoprotein C-terminal domain
AM341_RS18450	PF01979	Amidohydrolase family
AM341_RS18455	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS18455	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AM341_RS18460	PF12804	MobA-like NTP transferase domain
AM341_RS18470	PF02625	XdhC and CoxI family
AM341_RS18470	PF13478	XdhC Rossmann domain
AM341_RS18475	PF00696	Amino acid kinase family
AM341_RS18480	PF01979	Amidohydrolase family
AM341_RS18485	PF01546	Peptidase family M20/M25/M40
AM341_RS18485	PF07687	Peptidase dimerisation domain
AM341_RS18490	PF00291	Pyridoxal-phosphate dependent enzyme
AM341_RS18495	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AM341_RS18495	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AM341_RS18500	PF00158	Sigma-54 interaction domain
AM341_RS18500	PF02954	Bacterial regulatory protein, Fis family
AM341_RS18500	PF13188	PAS domain
AM341_RS18505	PF00111	2Fe-2S iron-sulfur cluster binding domain
AM341_RS18505	PF01799	[2Fe-2S] binding domain
AM341_RS18510	PF00941	FAD binding domain in molybdopterin dehydrogenase
AM341_RS18510	PF03450	CO dehydrogenase flavoprotein C-terminal domain
AM341_RS18515	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM341_RS18515	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
AM341_RS18525	PF01476	LysM domain
AM341_RS18525	PF01551	Peptidase family M23
AM341_RS18535	PF00589	Phage integrase family
AM341_RS18540	PF13643	AM341_RS18540
AM341_RS18570	PF01609	Transposase DDE domain
AM341_RS18580	PF01052	Surface presentation of antigens (SPOA)
AM341_RS18585	PF00813	AM341_RS18585
AM341_RS18590	PF01313	AM341_RS18590
AM341_RS18595	PF01311	AM341_RS18595
AM341_RS18600	PF01312	FlhB HrpN YscU SpaS Family
AM341_RS18605	PF01312	FlhB HrpN YscU SpaS Family
AM341_RS18610	PF04741	AM341_RS18610
AM341_RS18615	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS18625	PF13737	AM341_RS18625
AM341_RS18635	PF09480	Type III secretion system protein PrgH-EprH (PrgH)
AM341_RS18640	PF09392	Type III secretion needle MxiH like
AM341_RS18650	PF01514	Secretory protein of YscJ/FliF family
AM341_RS18655	PF09482	AM341_RS18655
AM341_RS18675	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS18680	PF01464	Transglycosylase SLT domain
AM341_RS18690	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS18695	PF07720	Tetratricopeptide repeat
AM341_RS18725	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS18730	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS18735	PF03222	Tryptophan/tyrosine permease family
AM341_RS18740	PF00108	Thiolase, N-terminal domain
AM341_RS18740	PF02803	Thiolase, C-terminal domain
AM341_RS18745	PF04962	KduI/IolB family
AM341_RS18750	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS18755	PF00083	Sugar (and other) transporter
AM341_RS18760	PF01177	Asp/Glu/Hydantoin racemase
AM341_RS18765	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS18765	PF03466	LysR substrate binding domain
AM341_RS18770	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AM341_RS18770	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AM341_RS18775	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS18775	PF13377	Periplasmic binding protein-like domain
AM341_RS18780	PF00501	AMP-binding enzyme
AM341_RS18780	PF01553	Acyltransferase
AM341_RS18785	PF07690	Major Facilitator Superfamily
AM341_RS18790	PF00248	Aldo/keto reductase family
AM341_RS18795	PF06004	Bacterial protein of unknown function (DUF903)
AM341_RS18800	PF03741	AM341_RS18800
AM341_RS18805	PF02976	DNA mismatch repair enzyme MutH
AM341_RS18810	PF00293	NUDIX domain
AM341_RS18815	PF00391	PEP-utilising enzyme, mobile domain
AM341_RS18815	PF01590	GAF domain
AM341_RS18815	PF02896	PEP-utilising enzyme, TIM barrel domain
AM341_RS18815	PF05524	PEP-utilising enzyme, N-terminal
AM341_RS18820	PF01790	AM341_RS18820
AM341_RS18825	PF00303	Thymidylate synthase
AM341_RS18830	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS18835	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS18840	PF10713	AM341_RS18840
AM341_RS18845	PF07963	Prokaryotic N-terminal methylation motif
AM341_RS18845	PF12528	AM341_RS18845
AM341_RS18850	PF04257	Exodeoxyribonuclease V, gamma subunit
AM341_RS18855	PF00675	Insulinase (Peptidase family M16)
AM341_RS18855	PF05193	Peptidase M16 inactive domain
AM341_RS18855	PF16187	AM341_RS18855
AM341_RS18860	PF00580	UvrD/REP helicase N-terminal domain
AM341_RS18860	PF12705	PD-(D/E)XK nuclease superfamily
AM341_RS18860	PF13361	UvrD-like helicase C-terminal domain
AM341_RS18865	PF13538	UvrD-like helicase C-terminal domain
AM341_RS18865	PF13604	AAA domain
AM341_RS18870	PF00583	Acetyltransferase (GNAT) family
AM341_RS18870	PF00696	Amino acid kinase family
AM341_RS18880	PF01520	N-acetylmuramoyl-L-alanine amidase
AM341_RS18880	PF11741	AMIN domain
AM341_RS18905	PF03562	MltA specific insert domain
AM341_RS18905	PF06725	3D domain
AM341_RS18910	PF00899	ThiF family
AM341_RS18915	PF02657	Fe-S metabolism associated domain
AM341_RS18920	PF00266	Aminotransferase class-V
AM341_RS18925	PF06004	Bacterial protein of unknown function (DUF903)
AM341_RS18930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS18930	PF03466	LysR substrate binding domain
AM341_RS18935	PF04241	AM341_RS18935
AM341_RS18940	PF01728	FtsJ-like methyltransferase
AM341_RS18945	PF00455	AM341_RS18945
AM341_RS18945	PF08220	DeoR-like helix-turn-helix domain
AM341_RS18950	PF05025	RbsD / FucU transport protein family
AM341_RS18955	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS18955	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS18960	PF02952	L-fucose isomerase, C-terminal domain
AM341_RS18960	PF07881	L-fucose isomerase, first N-terminal domain
AM341_RS18960	PF07882	L-fucose isomerase, second N-terminal domain
AM341_RS18965	PF07690	Major Facilitator Superfamily
AM341_RS18970	PF00596	Class II Aldolase and Adducin N-terminal domain
AM341_RS18975	PF00465	Iron-containing alcohol dehydrogenase
AM341_RS18980	PF01367	5'-3' exonuclease, C-terminal SAM fold
AM341_RS18980	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AM341_RS18985	PF03313	AM341_RS18985
AM341_RS18985	PF03315	Serine dehydratase beta chain
AM341_RS18995	PF03641	Possible lysine decarboxylase
AM341_RS18995	PF11892	Domain of unknown function (DUF3412)
AM341_RS18995	PF14793	Domain of unknown function (DUF4478)
AM341_RS19000	PF14489	QueF-like protein
AM341_RS19000	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AM341_RS19005	PF07348	Syd protein (SUKH-2)
AM341_RS19010	PF04287	tRNA pseudouridine synthase C
AM341_RS19015	PF00849	RNA pseudouridylate synthase
AM341_RS19020	PF00258	Flavodoxin
AM341_RS19025	PF07690	Major Facilitator Superfamily
AM341_RS19030	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AM341_RS19030	PF13378	Enolase C-terminal domain-like
AM341_RS19035	PF13378	Enolase C-terminal domain-like
AM341_RS19040	PF00072	Response regulator receiver domain
AM341_RS19040	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS19040	PF01627	Hpt domain
AM341_RS19040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS19040	PF09984	AM341_RS19040
AM341_RS19045	PF01938	TRAM domain
AM341_RS19045	PF05958	tRNA (Uracil-5-)-methyltransferase
AM341_RS19050	PF02824	TGS domain
AM341_RS19050	PF04607	Region found in RelA / SpoT proteins
AM341_RS19050	PF13291	ACT domain
AM341_RS19050	PF13328	HD domain
AM341_RS19055	PF04014	Antidote-toxin recognition MazE
AM341_RS19060	PF02452	PemK-like protein
AM341_RS19065	PF03819	MazG nucleotide pyrophosphohydrolase domain
AM341_RS19070	PF00117	Glutamine amidotransferase class-I
AM341_RS19070	PF06418	CTP synthase N-terminus
AM341_RS19075	PF00113	Enolase, C-terminal TIM barrel domain
AM341_RS19075	PF03952	Enolase, N-terminal domain
AM341_RS19080	PF04536	TLP18
AM341_RS19090	PF04055	Radical SAM superfamily
AM341_RS19090	PF13394	4Fe-4S single cluster domain
AM341_RS19095	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS19095	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS19100	PF07690	Major Facilitator Superfamily
AM341_RS19105	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS19110	PF01565	FAD binding domain
AM341_RS19110	PF02913	FAD linked oxidases, C-terminal domain
AM341_RS19115	PF00083	Sugar (and other) transporter
AM341_RS19120	PF01012	Electron transfer flavoprotein domain
AM341_RS19125	PF00766	Electron transfer flavoprotein FAD-binding domain
AM341_RS19125	PF01012	Electron transfer flavoprotein domain
AM341_RS19130	PF04309	Glycerol-3-phosphate responsive antiterminator
AM341_RS19140	PF12831	FAD dependent oxidoreductase
AM341_RS19145	PF01242	6-pyruvoyl tetrahydropterin synthase
AM341_RS19150	PF00175	Oxidoreductase NAD-binding domain
AM341_RS19150	PF00258	Flavodoxin
AM341_RS19150	PF00667	FAD binding domain
AM341_RS19155	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AM341_RS19155	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AM341_RS19160	PF01507	Phosphoadenosine phosphosulfate reductase family
AM341_RS19170	PF00270	DEAD/DEAH box helicase
AM341_RS19170	PF00271	Helicase conserved C-terminal domain
AM341_RS19175	PF09481	CRISPR-associated protein Cse1 (CRISPR_cse1)
AM341_RS19180	PF09485	CRISPR-associated protein Cse2 (CRISPR_cse2)
AM341_RS19185	PF09344	CT1975-like protein
AM341_RS19190	PF09704	CRISPR-associated protein (Cas_Cas5)
AM341_RS19195	PF08798	CRISPR associated protein
AM341_RS19200	PF01867	CRISPR associated protein Cas1
AM341_RS19205	PF09707	CRISPR-associated protein (Cas_Cas2CT1978)
AM341_RS19210	PF04389	Peptidase family M28
AM341_RS19215	PF01507	Phosphoadenosine phosphosulfate reductase family
AM341_RS19220	PF00009	Elongation factor Tu GTP binding domain
AM341_RS19225	PF01583	Adenylylsulphate kinase
AM341_RS19230	PF12084	AM341_RS19230
AM341_RS19235	PF04977	Septum formation initiator
AM341_RS19240	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AM341_RS19245	PF02542	YgbB family
AM341_RS19250	PF01142	tRNA pseudouridine synthase D (TruD)
AM341_RS19255	PF01975	Survival protein SurE
AM341_RS19260	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
AM341_RS19265	PF01476	LysM domain
AM341_RS19265	PF01551	Peptidase family M23
AM341_RS19270	PF00140	Sigma-70 factor, region 1
AM341_RS19270	PF04539	Sigma-70 region 3
AM341_RS19270	PF04542	Sigma-70 region 2
AM341_RS19270	PF04545	Sigma-70, region 4
AM341_RS19275	PF02447	AM341_RS19275
AM341_RS19280	PF01261	Xylose isomerase-like TIM barrel
AM341_RS19285	PF00596	Class II Aldolase and Adducin N-terminal domain
AM341_RS19290	PF07005	Protein of unknown function, DUF1537
AM341_RS19290	PF17042	AM341_RS19290
AM341_RS19295	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AM341_RS19295	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AM341_RS19300	PF00455	AM341_RS19300
AM341_RS19300	PF08220	DeoR-like helix-turn-helix domain
AM341_RS19305	PF00149	Calcineurin-like phosphoesterase
AM341_RS19310	PF00488	MutS domain V
AM341_RS19310	PF01624	MutS domain I
AM341_RS19310	PF05188	MutS domain II
AM341_RS19310	PF05190	MutS family domain IV
AM341_RS19310	PF05192	MutS domain III
AM341_RS19315	PF11756	AM341_RS19315
AM341_RS19320	PF00158	Sigma-54 interaction domain
AM341_RS19320	PF01590	GAF domain
AM341_RS19320	PF02954	Bacterial regulatory protein, Fis family
AM341_RS19325	PF00586	AIR synthase related protein, N-terminal domain
AM341_RS19325	PF02769	AIR synthase related protein, C-terminal domain
AM341_RS19330	PF01924	Hydrogenase formation hypA family
AM341_RS19335	PF01455	HupF/HypC family
AM341_RS19340	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AM341_RS19345	PF01155	Hydrogenase expression/synthesis hypA family
AM341_RS19350	PF11046	AM341_RS19350
AM341_RS19355	PF13247	4Fe-4S dicluster domain
AM341_RS19360	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AM341_RS19365	PF00146	NADH dehydrogenase
AM341_RS19370	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AM341_RS19370	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AM341_RS19370	PF00374	Nickel-dependent hydrogenase
AM341_RS19375	PF12838	4Fe-4S dicluster domain
AM341_RS19380	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AM341_RS19385	PF07450	AM341_RS19385
AM341_RS19390	PF01750	Hydrogenase maturation protease
AM341_RS19395	PF00232	Glycosyl hydrolase family 1
AM341_RS19400	PF00367	phosphotransferase system, EIIB
AM341_RS19400	PF02378	Phosphotransferase system, EIIC
AM341_RS19405	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS19405	PF13377	Periplasmic binding protein-like domain
AM341_RS19410	PF12798	4Fe-4S binding domain
AM341_RS19410	PF12800	4Fe-4S binding domain
AM341_RS19410	PF13247	4Fe-4S dicluster domain
AM341_RS19415	PF00708	Acylphosphatase
AM341_RS19415	PF01300	Telomere recombination
AM341_RS19415	PF07503	HypF finger
AM341_RS19420	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS19425	PF00258	Flavodoxin
AM341_RS19425	PF00301	Rubredoxin
AM341_RS19425	PF00753	Metallo-beta-lactamase superfamily
AM341_RS19430	PF00158	Sigma-54 interaction domain
AM341_RS19430	PF01590	GAF domain
AM341_RS19435	PF00571	CBS domain
AM341_RS19435	PF01380	SIS domain
AM341_RS19440	PF00455	AM341_RS19440
AM341_RS19440	PF08220	DeoR-like helix-turn-helix domain
AM341_RS19445	PF06923	AM341_RS19445
AM341_RS19450	PF00106	short chain dehydrogenase
AM341_RS19455	PF03829	PTS system glucitol/sorbitol-specific IIA component
AM341_RS19460	PF03612	AM341_RS19460
AM341_RS19460	PF07663	AM341_RS19460
AM341_RS19465	PF03608	AM341_RS19465
AM341_RS19470	PF13406	Transglycosylase SLT domain
AM341_RS19475	PF02464	Competence-damaged protein
AM341_RS19480	PF00154	recA bacterial DNA recombination protein
AM341_RS19485	PF02631	RecX family
AM341_RS19490	PF01411	tRNA synthetases class II (A)
AM341_RS19490	PF02272	DHHA1 domain
AM341_RS19490	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AM341_RS19495	PF02599	Global regulator protein family
AM341_RS19525	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS19530	PF09335	AM341_RS19530
AM341_RS19535	PF04262	Glutamate-cysteine ligase
AM341_RS19540	PF02664	S-Ribosylhomocysteinase (LuxS)
AM341_RS19545	PF07690	Major Facilitator Superfamily
AM341_RS19550	PF00529	HlyD family secretion protein
AM341_RS19550	PF16576	AM341_RS19550
AM341_RS19555	PF01047	MarR family
AM341_RS19560	PF05437	AM341_RS19560
AM341_RS19565	PF03591	AM341_RS19565
AM341_RS19570	PF07690	Major Facilitator Superfamily
AM341_RS19575	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AM341_RS19580	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS19585	PF00005	ABC transporter
AM341_RS19585	PF00571	CBS domain
AM341_RS19595	PF00268	Ribonucleotide reductase, small chain
AM341_RS19600	PF00317	Ribonucleotide reductase, all-alpha domain
AM341_RS19600	PF02867	Ribonucleotide reductase, barrel domain
AM341_RS19600	PF08343	Ribonucleotide reductase N-terminal
AM341_RS19605	PF07972	NrdI Flavodoxin like
AM341_RS19610	PF00462	Glutaredoxin
AM341_RS19615	PF05957	AM341_RS19615
AM341_RS19620	PF09400	Protein of unknown function (DUF2002)
AM341_RS19625	PF06610	AM341_RS19625
AM341_RS19630	PF00816	H-NS histone family
AM341_RS19635	PF00581	Rhodanese-like domain
AM341_RS19635	PF11127	Protein of unknown function (DUF2892)
AM341_RS19640	PF01022	Bacterial regulatory protein, arsR family
AM341_RS19645	PF01679	AM341_RS19645
AM341_RS19650	PF01476	LysM domain
AM341_RS19650	PF04972	BON domain
AM341_RS19655	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS19655	PF07729	FCD domain
AM341_RS19660	PF00324	Amino acid permease
AM341_RS19665	PF00202	Aminotransferase class-III
AM341_RS19670	PF00171	Aldehyde dehydrogenase family
AM341_RS19675	PF01266	FAD dependent oxidoreductase
AM341_RS19680	PF08943	CsiD
AM341_RS19705	PF17612	AM341_RS19705
AM341_RS19710	PF17621	AM341_RS19710
AM341_RS19720	PF00239	Resolvase, N terminal domain
AM341_RS19730	PF03212	Pertactin
AM341_RS19730	PF03797	Autotransporter beta-domain
AM341_RS19730	PF16168	AM341_RS19730
AM341_RS19740	PF01668	SmpB protein
AM341_RS19745	PF03364	Polyketide cyclase / dehydrase and lipid transport
AM341_RS19750	PF03658	RnfH family Ubiquitin
AM341_RS19755	PF04355	SmpA / OmlA family
AM341_RS19760	PF02463	RecF/RecN/SMC N terminal domain
AM341_RS19765	PF01513	ATP-NAD kinase
AM341_RS19775	PF01025	GrpE
AM341_RS19780	PF00571	CBS domain
AM341_RS19780	PF01595	AM341_RS19780
AM341_RS19780	PF03471	Transporter associated domain
AM341_RS19785	PF01578	AM341_RS19785
AM341_RS19790	PF00448	SRP54-type protein, GTPase domain
AM341_RS19790	PF02881	SRP54-type protein, helical bundle domain
AM341_RS19790	PF02978	Signal peptide binding domain
AM341_RS19795	PF00886	Ribosomal protein S16
AM341_RS19800	PF01782	RimM N-terminal domain
AM341_RS19800	PF05239	PRC-barrel domain
AM341_RS19805	PF01746	tRNA (Guanine-1)-methyltransferase
AM341_RS19810	PF01245	Ribosomal protein L19
AM341_RS19815	PF00691	OmpA family
AM341_RS19820	PF00990	GGDEF domain
AM341_RS19820	PF17152	AM341_RS19820
AM341_RS19825	PF13689	AM341_RS19825
AM341_RS19830	PF10973	AM341_RS19830
AM341_RS19835	PF00793	DAHP synthetase I family
AM341_RS19840	PF01817	Chorismate mutase type II
AM341_RS19840	PF02153	Prephenate dehydrogenase
AM341_RS19845	PF00800	Prephenate dehydratase
AM341_RS19845	PF01817	Chorismate mutase type II
AM341_RS19850	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AM341_RS19860	PF13525	Outer membrane lipoprotein
AM341_RS19865	PF00849	RNA pseudouridylate synthase
AM341_RS19865	PF01479	S4 domain
AM341_RS19870	PF02578	Multi-copper polyphenol oxidoreductase laccase
AM341_RS19875	PF00004	ATPase family associated with various cellular activities (AAA)
AM341_RS19875	PF02861	Clp amino terminal domain
AM341_RS19875	PF07724	AAA domain (Cdc48 subfamily)
AM341_RS19875	PF10431	C-terminal, D2-small domain, of ClpB protein
AM341_RS19905	PF00083	Sugar (and other) transporter
AM341_RS19910	PF10043	AM341_RS19910
AM341_RS19915	PF13091	PLD-like domain
AM341_RS19920	PF00583	Acetyltransferase (GNAT) family
AM341_RS19920	PF13380	CoA binding domain
AM341_RS19920	PF13549	ATP-grasp domain
AM341_RS19920	PF13607	Succinyl-CoA ligase like flavodoxin domain
AM341_RS19925	PF03942	AM341_RS19925
AM341_RS19930	PF00085	Thioredoxin
AM341_RS19940	PF00588	SpoU rRNA Methylase family
AM341_RS19940	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AM341_RS19945	PF03167	Uracil DNA glycosylase superfamily
AM341_RS19950	PF01228	Glycine radical
AM341_RS19955	PF01810	AM341_RS19955
AM341_RS19960	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS19960	PF03466	LysR substrate binding domain
AM341_RS19965	PF00270	DEAD/DEAH box helicase
AM341_RS19965	PF00271	Helicase conserved C-terminal domain
AM341_RS19970	PF05175	Methyltransferase small domain
AM341_RS19975	PF00890	FAD binding domain
AM341_RS19975	PF02910	Fumarate reductase flavoprotein C-term
AM341_RS19980	PF04542	Sigma-70 region 2
AM341_RS19980	PF08281	Sigma-70, region 4
AM341_RS19985	PF03872	Anti sigma-E protein RseA, N-terminal domain
AM341_RS19985	PF03873	Anti sigma-E protein RseA, C-terminal domain
AM341_RS19990	PF03888	MucB/RseB family
AM341_RS19990	PF17188	AM341_RS19990
AM341_RS19995	PF04246	AM341_RS19995
AM341_RS20000	PF00009	Elongation factor Tu GTP binding domain
AM341_RS20000	PF00679	Elongation factor G C-terminus
AM341_RS20000	PF03144	Elongation factor Tu domain 2
AM341_RS20000	PF06421	GTP-binding protein LepA C-terminus
AM341_RS20005	PF00717	Peptidase S24-like
AM341_RS20005	PF10502	Signal peptidase, peptidase S26
AM341_RS20015	PF00035	Double-stranded RNA binding motif
AM341_RS20015	PF14622	Ribonuclease-III-like
AM341_RS20020	PF01926	50S ribosome-binding GTPase
AM341_RS20020	PF07650	KH domain
AM341_RS20025	PF02565	Recombination protein O C terminal
AM341_RS20025	PF11967	Recombination protein O N terminal
AM341_RS20030	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AM341_RS20035	PF01648	4'-phosphopantetheinyl transferase superfamily
AM341_RS20055	PF00037	4Fe-4S binding domain
AM341_RS20060	PF01380	SIS domain
AM341_RS20060	PF01418	Helix-turn-helix domain, rpiR family
AM341_RS20065	PF12710	haloacid dehalogenase-like hydrolase
AM341_RS20070	PF14437	AM341_RS20070
AM341_RS20075	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS20075	PF01464	Transglycosylase SLT domain
AM341_RS20085	PF02769	AIR synthase related protein, C-terminal domain
AM341_RS20085	PF13507	CobB/CobQ-like glutamine amidotransferase domain
AM341_RS20090	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS20090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS20095	PF13942	AM341_RS20095
AM341_RS20100	PF00072	Response regulator receiver domain
AM341_RS20100	PF00158	Sigma-54 interaction domain
AM341_RS20105	PF00543	Nitrogen regulatory protein P-II
AM341_RS20110	PF00042	Globin
AM341_RS20110	PF00175	Oxidoreductase NAD-binding domain
AM341_RS20110	PF00970	Oxidoreductase FAD-binding domain
AM341_RS20115	PF00464	Serine hydroxymethyltransferase
AM341_RS20120	PF00480	ROK family
AM341_RS20125	PF13181	Tetratricopeptide repeat
AM341_RS20125	PF13432	Tetratricopeptide repeat
AM341_RS20125	PF17128	AM341_RS20125
AM341_RS20130	PF13407	Periplasmic binding protein domain
AM341_RS20135	PF00005	ABC transporter
AM341_RS20140	PF02653	AM341_RS20140
AM341_RS20145	PF00107	Zinc-binding dehydrogenase
AM341_RS20145	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS20150	PF01263	Aldose 1-epimerase
AM341_RS20155	PF07681	AM341_RS20155
AM341_RS20160	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS20160	PF14759	Reductase C-terminal
AM341_RS20165	PF00106	short chain dehydrogenase
AM341_RS20170	PF00355	Rieske [2Fe-2S] domain
AM341_RS20175	PF00866	Ring hydroxylating beta subunit
AM341_RS20180	PF00355	Rieske [2Fe-2S] domain
AM341_RS20180	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
AM341_RS20185	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS20185	PF03466	LysR substrate binding domain
AM341_RS20190	PF12832	MFS_1 like family
AM341_RS20195	PF00874	PRD domain
AM341_RS20200	PF12146	Putative lysophospholipase
AM341_RS20205	PF00459	Inositol monophosphatase family
AM341_RS20210	PF00588	SpoU rRNA Methylase family
AM341_RS20215	PF02082	Transcriptional regulator
AM341_RS20220	PF00266	Aminotransferase class-V
AM341_RS20225	PF01592	NifU-like N terminal domain
AM341_RS20230	PF01521	Iron-sulphur cluster biosynthesis
AM341_RS20235	PF07743	HSCB C-terminal oligomerisation domain
AM341_RS20240	PF00012	Hsp70 protein
AM341_RS20245	PF00111	2Fe-2S iron-sulfur cluster binding domain
AM341_RS20250	PF04384	Iron-sulphur cluster assembly
AM341_RS20255	PF00883	Cytosol aminopeptidase family, catalytic domain
AM341_RS20255	PF12404	AM341_RS20255
AM341_RS20260	PF07179	AM341_RS20260
AM341_RS20260	PF14581	AM341_RS20260
AM341_RS20265	PF00581	Rhodanese-like domain
AM341_RS20270	PF00207	Alpha-2-macroglobulin family
AM341_RS20270	PF01835	MG2 domain
AM341_RS20270	PF07703	Alpha-2-macroglobulin family N-terminal region
AM341_RS20270	PF11974	Alpha-2-macroglobulin MG1 domain
AM341_RS20275	PF00905	Penicillin binding protein transpeptidase domain
AM341_RS20275	PF00912	Transglycosylase
AM341_RS20275	PF06832	AM341_RS20275
AM341_RS20280	PF00334	Nucleoside diphosphate kinase
AM341_RS20285	PF04055	Radical SAM superfamily
AM341_RS20295	PF13413	Helix-turn-helix domain
AM341_RS20295	PF13464	AM341_RS20295
AM341_RS20300	PF04551	GcpE protein
AM341_RS20305	PF03129	Anticodon binding domain
AM341_RS20305	PF13393	Histidyl-tRNA synthetase
AM341_RS20310	PF09976	Tetratricopeptide repeat
AM341_RS20315	PF13360	PQQ-like domain
AM341_RS20320	PF01926	50S ribosome-binding GTPase
AM341_RS20320	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AM341_RS20325	PF07191	zinc-ribbons
AM341_RS20330	PF02601	AM341_RS20330
AM341_RS20330	PF13742	AM341_RS20330
AM341_RS20335	PF00478	IMP dehydrogenase / GMP reductase domain
AM341_RS20335	PF00571	CBS domain
AM341_RS20340	PF00117	Glutamine amidotransferase class-I
AM341_RS20340	PF00958	GMP synthase C terminal domain
AM341_RS20340	PF02540	NAD synthase
AM341_RS20345	PF17358	AM341_RS20345
AM341_RS20350	PF05433	AM341_RS20350
AM341_RS20360	PF11119	AM341_RS20360
AM341_RS20370	PF00563	EAL domain
AM341_RS20370	PF05231	AM341_RS20370
AM341_RS20375	PF02541	Ppx/GppA phosphatase family
AM341_RS20380	PF02503	Polyphosphate kinase middle domain
AM341_RS20380	PF13089	Polyphosphate kinase N-terminal domain
AM341_RS20380	PF13090	Polyphosphate kinase C-terminal domain
AM341_RS20385	PF00551	Formyl transferase
AM341_RS20390	PF00586	AIR synthase related protein, N-terminal domain
AM341_RS20390	PF02769	AIR synthase related protein, C-terminal domain
AM341_RS20400	PF14681	Uracil phosphoribosyltransferase
AM341_RS20405	PF00860	Permease family
AM341_RS20410	PF00308	Bacterial dnaA  protein
AM341_RS20415	PF03960	ArsC family
AM341_RS20420	PF01435	Peptidase family M48
AM341_RS20420	PF14559	Tetratricopeptide repeat
AM341_RS20425	PF01594	AM341_RS20425
AM341_RS20435	PF01226	Formate/nitrite transporter
AM341_RS20440	PF00158	Sigma-54 interaction domain
AM341_RS20440	PF01590	GAF domain
AM341_RS20440	PF02954	Bacterial regulatory protein, Fis family
AM341_RS20445	PF07450	AM341_RS20445
AM341_RS20450	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AM341_RS20455	PF12838	4Fe-4S dicluster domain
AM341_RS20460	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AM341_RS20460	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AM341_RS20460	PF00374	Nickel-dependent hydrogenase
AM341_RS20465	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AM341_RS20465	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AM341_RS20470	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AM341_RS20475	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AM341_RS20475	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AM341_RS20480	PF00146	NADH dehydrogenase
AM341_RS20485	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AM341_RS20490	PF00037	4Fe-4S binding domain
AM341_RS20490	PF12798	4Fe-4S binding domain
AM341_RS20495	PF00578	AhpC/TSA family
AM341_RS20500	PF01842	ACT domain
AM341_RS20500	PF13740	ACT domain
AM341_RS20505	PF00701	Dihydrodipicolinate synthetase family
AM341_RS20510	PF06804	NlpB/DapX lipoprotein
AM341_RS20515	PF01259	SAICAR synthetase
AM341_RS20520	PF04228	AM341_RS20520
AM341_RS20525	PF05127	Helicase
AM341_RS20525	PF08351	Domain of unknown function (DUF1726)
AM341_RS20525	PF13718	GNAT acetyltransferase 2
AM341_RS20525	PF17176	AM341_RS20525
AM341_RS20530	PF02230	Phospholipase/Carboxylesterase
AM341_RS20535	PF13980	AM341_RS20535
AM341_RS20540	PF01546	Peptidase family M20/M25/M40
AM341_RS20540	PF07687	Peptidase dimerisation domain
AM341_RS20545	PF03960	ArsC family
AM341_RS20555	PF00873	AcrB/AcrD/AcrF family
AM341_RS20560	PF00672	HAMP domain
AM341_RS20560	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS20560	PF07730	Histidine kinase
AM341_RS20560	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AM341_RS20565	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS20565	PF13247	4Fe-4S dicluster domain
AM341_RS20565	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AM341_RS20570	PF00293	NUDIX domain
AM341_RS20575	PF06674	AM341_RS20575
AM341_RS20580	PF00456	Transketolase, thiamine diphosphate binding domain
AM341_RS20580	PF02779	Transketolase, pyrimidine binding domain
AM341_RS20580	PF02780	Transketolase, C-terminal domain
AM341_RS20585	PF00923	Transaldolase
AM341_RS20590	PF00390	Malic enzyme, N-terminal domain
AM341_RS20590	PF01515	Phosphate acetyl/butaryl transferase
AM341_RS20590	PF03949	Malic enzyme, NAD binding domain
AM341_RS20595	PF00936	BMC domain
AM341_RS20600	PF10662	Ethanolamine utilisation - propanediol utilisation
AM341_RS20605	PF06249	Ethanolamine utilisation protein EutQ
AM341_RS20610	PF01923	Cobalamin adenosyltransferase
AM341_RS20615	PF01515	Phosphate acetyl/butaryl transferase
AM341_RS20620	PF00936	BMC domain
AM341_RS20625	PF03319	Ethanolamine utilisation protein EutN/carboxysome
AM341_RS20630	PF00171	Aldehyde dehydrogenase family
AM341_RS20635	PF14450	Cell division protein FtsA
AM341_RS20640	PF00465	Iron-containing alcohol dehydrogenase
AM341_RS20645	PF04346	AM341_RS20645
AM341_RS20650	PF06277	Ethanolamine utilisation protein EutA
AM341_RS20655	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
AM341_RS20660	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
AM341_RS20665	PF00936	BMC domain
AM341_RS20670	PF00936	BMC domain
AM341_RS20670	PF16365	AM341_RS20670
AM341_RS20675	PF12833	Helix-turn-helix domain
AM341_RS20680	PF01218	Coproporphyrinogen III oxidase
AM341_RS20685	PF01520	N-acetylmuramoyl-L-alanine amidase
AM341_RS20690	PF00583	Acetyltransferase (GNAT) family
AM341_RS20695	PF11143	AM341_RS20695
AM341_RS20700	PF06572	Protein of unknown function (DUF1131)
AM341_RS20705	PF04261	Dyp-type peroxidase family
AM341_RS20710	PF00144	Beta-lactamase
AM341_RS20715	PF00367	phosphotransferase system, EIIB
AM341_RS20715	PF02378	Phosphotransferase system, EIIC
AM341_RS20720	PF01380	SIS domain
AM341_RS20725	PF01380	SIS domain
AM341_RS20725	PF01418	Helix-turn-helix domain, rpiR family
AM341_RS20730	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS20740	PF13531	Bacterial extracellular solute-binding protein
AM341_RS20745	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS20750	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS20755	PF00005	ABC transporter
AM341_RS20755	PF12857	AM341_RS20755
AM341_RS20760	PF00291	Pyridoxal-phosphate dependent enzyme
AM341_RS20765	PF05406	WGR domain
AM341_RS20770	PF17263	AM341_RS20770
AM341_RS20775	PF08543	Phosphomethylpyrimidine kinase
AM341_RS20780	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AM341_RS20785	PF00391	PEP-utilising enzyme, mobile domain
AM341_RS20785	PF02896	PEP-utilising enzyme, TIM barrel domain
AM341_RS20785	PF05524	PEP-utilising enzyme, N-terminal
AM341_RS20790	PF00381	PTS HPr component phosphorylation site
AM341_RS20795	PF00291	Pyridoxal-phosphate dependent enzyme
AM341_RS20800	PF07264	Etoposide-induced protein 2
AM341_RS20805	PF04354	ZipA, C-terminal FtsZ-binding domain
AM341_RS20810	PF00533	BRCA1 C Terminus (BRCT) domain
AM341_RS20810	PF01653	NAD-dependent DNA ligase adenylation domain
AM341_RS20810	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AM341_RS20810	PF03120	NAD-dependent DNA ligase OB-fold domain
AM341_RS20810	PF12826	Helix-hairpin-helix motif
AM341_RS20810	PF14520	Helix-hairpin-helix domain
AM341_RS20815	PF12843	AM341_RS20815
AM341_RS20820	PF13593	SBF-like CPA transporter family (DUF4137)
AM341_RS20825	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS20825	PF03466	LysR substrate binding domain
AM341_RS20830	PF03502	Nucleoside-specific channel-forming protein, Tsx
AM341_RS20835	PF01048	Phosphorylase superfamily
AM341_RS20840	PF03825	AM341_RS20840
AM341_RS20850	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS20850	PF03466	LysR substrate binding domain
AM341_RS20875	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AM341_RS20880	PF07037	AM341_RS20880
AM341_RS20885	PF07037	AM341_RS20885
AM341_RS20900	PF00563	EAL domain
AM341_RS20900	PF05231	AM341_RS20900
AM341_RS20905	PF01609	Transposase DDE domain
AM341_RS20910	PF01773	Na+ dependent nucleoside transporter N-terminus
AM341_RS20910	PF07662	Na+ dependent nucleoside transporter C-terminus
AM341_RS20910	PF07670	Nucleoside recognition
AM341_RS20915	PF01566	AM341_RS20915
AM341_RS20920	PF10697	AM341_RS20920
AM341_RS20925	PF00654	Voltage gated chloride channel
AM341_RS20930	PF02685	Glucokinase
AM341_RS20935	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS20940	PF02378	Phosphotransferase system, EIIC
AM341_RS20945	PF00557	Metallopeptidase family M24
AM341_RS20945	PF01321	Creatinase/Prolidase N-terminal domain
AM341_RS20950	PF05343	M42 glutamyl aminopeptidase
AM341_RS20955	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS20955	PF00381	PTS HPr component phosphorylation site
AM341_RS20955	PF00391	PEP-utilising enzyme, mobile domain
AM341_RS20955	PF02896	PEP-utilising enzyme, TIM barrel domain
AM341_RS20955	PF05524	PEP-utilising enzyme, N-terminal
AM341_RS20965	PF00072	Response regulator receiver domain
AM341_RS20965	PF04397	LytTr DNA-binding domain
AM341_RS20970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS20970	PF06580	AM341_RS20970
AM341_RS20970	PF07694	5TMR of 5TMR-LYT
AM341_RS20975	PF00155	Aminotransferase class I and II
AM341_RS20985	PF03279	AM341_RS20985
AM341_RS20990	PF10810	AM341_RS20990
AM341_RS21000	PF10938	YfdX protein
AM341_RS21005	PF02515	CoA-transferase family III
AM341_RS21010	PF00205	Thiamine pyrophosphate enzyme, central domain
AM341_RS21010	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AM341_RS21010	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AM341_RS21015	PF03547	AM341_RS21015
AM341_RS21020	PF02515	CoA-transferase family III
AM341_RS21025	PF00072	Response regulator receiver domain
AM341_RS21025	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS21025	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS21025	PF01627	Hpt domain
AM341_RS21025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS21030	PF00072	Response regulator receiver domain
AM341_RS21030	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS21035	PF00529	HlyD family secretion protein
AM341_RS21035	PF16576	AM341_RS21035
AM341_RS21040	PF07690	Major Facilitator Superfamily
AM341_RS21045	PF00291	Pyridoxal-phosphate dependent enzyme
AM341_RS21055	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS21055	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AM341_RS21060	PF00251	Glycosyl hydrolases family 32 N-terminal domain
AM341_RS21060	PF08244	Glycosyl hydrolases family 32 C terminal
AM341_RS21065	PF00294	pfkB family carbohydrate kinase
AM341_RS21070	PF01306	LacY proton/sugar symporter
AM341_RS21080	PF01226	Formate/nitrite transporter
AM341_RS21090	PF04333	AM341_RS21090
AM341_RS21105	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AM341_RS21115	PF04175	Protein of unknown function (DUF406)
AM341_RS21120	PF00108	Thiolase, N-terminal domain
AM341_RS21120	PF02803	Thiolase, C-terminal domain
AM341_RS21125	PF00378	Enoyl-CoA hydratase/isomerase family
AM341_RS21125	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AM341_RS21125	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AM341_RS21130	PF00300	Histidine phosphatase superfamily (branch 1)
AM341_RS21135	PF00419	Fimbrial protein
AM341_RS21140	PF00577	Outer membrane usher protein
AM341_RS21140	PF13953	PapC C-terminal domain
AM341_RS21140	PF13954	PapC N-terminal domain
AM341_RS21145	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS21145	PF02753	Pili assembly chaperone PapD, C-terminal domain
AM341_RS21150	PF00419	Fimbrial protein
AM341_RS21155	PF00419	Fimbrial protein
AM341_RS21160	PF00419	Fimbrial protein
AM341_RS21165	PF11245	AM341_RS21165
AM341_RS21170	PF01713	Smr domain
AM341_RS21175	PF05175	Methyltransferase small domain
AM341_RS21180	PF01264	Chorismate synthase
AM341_RS21185	PF03411	Penicillin-insensitive murein endopeptidase
AM341_RS21190	PF01925	AM341_RS21190
AM341_RS21195	PF04315	AM341_RS21195
AM341_RS21200	PF08891	AM341_RS21200
AM341_RS21205	PF01266	FAD dependent oxidoreductase
AM341_RS21205	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AM341_RS21210	PF00109	Beta-ketoacyl synthase, N-terminal domain
AM341_RS21210	PF02801	Beta-ketoacyl synthase, C-terminal domain
AM341_RS21220	PF07690	Major Facilitator Superfamily
AM341_RS21230	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AM341_RS21230	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AM341_RS21230	PF11890	Domain of unknown function (DUF3410)
AM341_RS21235	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AM341_RS21235	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AM341_RS21240	PF01416	tRNA pseudouridine synthase
AM341_RS21245	PF09335	AM341_RS21245
AM341_RS21250	PF01039	Carboxyl transferase domain
AM341_RS21255	PF02875	Mur ligase family, glutamate ligase domain
AM341_RS21255	PF08245	Mur ligase middle domain
AM341_RS21260	PF05036	Sporulation related domain
AM341_RS21265	PF02674	AM341_RS21265
AM341_RS21270	PF00156	Phosphoribosyl transferase domain
AM341_RS21270	PF13522	Glutamine amidotransferase domain
AM341_RS21275	PF02441	Flavoprotein
AM341_RS21280	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS21285	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS21290	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS21295	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS21300	PF00005	ABC transporter
AM341_RS21305	PF04754	AM341_RS21305
AM341_RS21310	PF01370	NAD dependent epimerase/dehydratase family
AM341_RS21310	PF08338	Domain of unknown function (DUF1731)
AM341_RS21315	PF02152	Dihydroneopterin aldolase
AM341_RS21320	PF00043	Glutathione S-transferase, C-terminal domain
AM341_RS21320	PF02798	Glutathione S-transferase, N-terminal domain
AM341_RS21325	PF13417	Glutathione S-transferase, N-terminal domain
AM341_RS21325	PF14834	Glutathione S-transferase, C-terminal domain
AM341_RS21330	PF12850	Calcineurin-like phosphoesterase superfamily domain
AM341_RS21335	PF00293	NUDIX domain
AM341_RS21340	PF03606	AM341_RS21340
AM341_RS21345	PF01515	Phosphate acetyl/butaryl transferase
AM341_RS21345	PF07085	DRTGG domain
AM341_RS21345	PF13500	AAA domain
AM341_RS21350	PF00871	Acetokinase family
AM341_RS21355	PF04217	AM341_RS21355
AM341_RS21360	PF03887	YfbU domain
AM341_RS21365	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS21370	PF02080	TrkA-C domain
AM341_RS21370	PF03600	Citrate transporter
AM341_RS21375	PF13023	HD domain
AM341_RS21380	PF00155	Aminotransferase class I and II
AM341_RS21390	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS21390	PF03466	LysR substrate binding domain
AM341_RS21395	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
AM341_RS21400	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AM341_RS21405	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AM341_RS21405	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AM341_RS21410	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
AM341_RS21415	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AM341_RS21415	PF10531	SLBB domain
AM341_RS21415	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AM341_RS21420	PF00384	Molybdopterin oxidoreductase
AM341_RS21420	PF01568	Molydopterin dinucleotide binding domain
AM341_RS21420	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AM341_RS21420	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AM341_RS21420	PF13510	2Fe-2S iron-sulfur cluster binding domain
AM341_RS21425	PF00146	NADH dehydrogenase
AM341_RS21430	PF12838	4Fe-4S dicluster domain
AM341_RS21435	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
AM341_RS21440	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AM341_RS21445	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AM341_RS21445	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AM341_RS21450	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AM341_RS21455	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
AM341_RS21475	PF08974	Domain of unknown function (DUF1877)
AM341_RS21480	PF04389	Peptidase family M28
AM341_RS21485	PF00092	von Willebrand factor type A domain
AM341_RS21485	PF12034	AM341_RS21485
AM341_RS21485	PF12450	AM341_RS21485
AM341_RS21490	PF02902	Ulp1 protease family, C-terminal catalytic domain
AM341_RS21495	PF12706	Beta-lactamase superfamily domain
AM341_RS21500	PF13673	Acetyltransferase (GNAT) domain
AM341_RS21505	PF05957	AM341_RS21505
AM341_RS21510	PF00425	chorismate binding enzyme
AM341_RS21515	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AM341_RS21515	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AM341_RS21515	PF16582	AM341_RS21515
AM341_RS21520	PF12697	Alpha/beta hydrolase family
AM341_RS21525	PF00378	Enoyl-CoA hydratase/isomerase family
AM341_RS21530	PF13378	Enolase C-terminal domain-like
AM341_RS21535	PF00501	AMP-binding enzyme
AM341_RS21535	PF13193	AMP-binding enzyme C-terminal domain
AM341_RS21540	PF11183	Polymyxin resistance protein PmrD
AM341_RS21550	PF00892	EamA-like transporter family
AM341_RS21555	PF02366	AM341_RS21555
AM341_RS21560	PF01522	Polysaccharide deacetylase
AM341_RS21565	PF00551	Formyl transferase
AM341_RS21565	PF01370	NAD dependent epimerase/dehydratase family
AM341_RS21565	PF02911	Formyl transferase, C-terminal domain
AM341_RS21570	PF00535	Glycosyl transferase family 2
AM341_RS21575	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AM341_RS21580	PF00300	Histidine phosphatase superfamily (branch 1)
AM341_RS21585	PF00293	NUDIX domain
AM341_RS21590	PF07437	AM341_RS21590
AM341_RS21595	PF00994	Probable molybdopterin binding domain
AM341_RS21605	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AM341_RS21605	PF13378	Enolase C-terminal domain-like
AM341_RS21610	PF07690	Major Facilitator Superfamily
AM341_RS21615	PF03328	HpcH/HpaI aldolase/citrate lyase family
AM341_RS21625	PF04754	AM341_RS21625
AM341_RS21630	PF02754	AM341_RS21630
AM341_RS21630	PF13183	4Fe-4S dicluster domain
AM341_RS21635	PF00890	FAD binding domain
AM341_RS21640	PF01266	FAD dependent oxidoreductase
AM341_RS21640	PF04324	BFD-like [2Fe-2S] binding domain
AM341_RS21645	PF07690	Major Facilitator Superfamily
AM341_RS21650	PF03009	Glycerophosphoryl diester phosphodiesterase family
AM341_RS21660	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
AM341_RS21665	PF00111	2Fe-2S iron-sulfur cluster binding domain
AM341_RS21670	PF00268	Ribonucleotide reductase, small chain
AM341_RS21675	PF00317	Ribonucleotide reductase, all-alpha domain
AM341_RS21675	PF02867	Ribonucleotide reductase, barrel domain
AM341_RS21675	PF03477	ATP cone domain
AM341_RS21685	PF02415	AM341_RS21685
AM341_RS21685	PF03797	Autotransporter beta-domain
AM341_RS21685	PF12951	AM341_RS21685
AM341_RS21690	PF13489	Methyltransferase domain
AM341_RS21695	PF00521	DNA gyrase/topoisomerase IV, subunit A
AM341_RS21695	PF03989	DNA gyrase C-terminal domain, beta-propeller
AM341_RS21700	PF09909	AM341_RS21700
AM341_RS21705	PF06672	AM341_RS21705
AM341_RS21710	PF00207	Alpha-2-macroglobulin family
AM341_RS21710	PF01835	MG2 domain
AM341_RS21710	PF07703	Alpha-2-macroglobulin family N-terminal region
AM341_RS21715	PF08486	AM341_RS21715
AM341_RS21715	PF10062	AM341_RS21715
AM341_RS21720	PF09906	AM341_RS21720
AM341_RS21725	PF00108	Thiolase, N-terminal domain
AM341_RS21725	PF02803	Thiolase, C-terminal domain
AM341_RS21730	PF02667	AM341_RS21730
AM341_RS21735	PF01144	Coenzyme A transferase
AM341_RS21740	PF01144	Coenzyme A transferase
AM341_RS21745	PF00072	Response regulator receiver domain
AM341_RS21745	PF00158	Sigma-54 interaction domain
AM341_RS21745	PF02954	Bacterial regulatory protein, Fis family
AM341_RS21750	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS21750	PF00989	PAS fold
AM341_RS21750	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS21755	PF00072	Response regulator receiver domain
AM341_RS21755	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS21755	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS21755	PF09456	RcsC Alpha-Beta-Loop (ABL)
AM341_RS21760	PF00072	Response regulator receiver domain
AM341_RS21760	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS21765	PF01627	Hpt domain
AM341_RS21765	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS21765	PF16359	AM341_RS21765
AM341_RS21780	PF00267	Gram-negative porin
AM341_RS21785	PF02424	ApbE family
AM341_RS21790	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AM341_RS21790	PF02805	Metal binding domain of Ada
AM341_RS21790	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AM341_RS21790	PF12833	Helix-turn-helix domain
AM341_RS21795	PF13532	2OG-Fe(II) oxygenase superfamily
AM341_RS21800	PF00005	ABC transporter
AM341_RS21805	PF06039	AM341_RS21805
AM341_RS21810	PF03974	Ecotin
AM341_RS21820	PF00037	4Fe-4S binding domain
AM341_RS21820	PF12800	4Fe-4S binding domain
AM341_RS21820	PF13187	4Fe-4S dicluster domain
AM341_RS21825	PF03927	NapD protein
AM341_RS21830	PF00384	Molybdopterin oxidoreductase
AM341_RS21830	PF01568	Molydopterin dinucleotide binding domain
AM341_RS21830	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AM341_RS21835	PF12800	4Fe-4S binding domain
AM341_RS21835	PF12838	4Fe-4S dicluster domain
AM341_RS21840	PF12801	AM341_RS21840
AM341_RS21840	PF13237	4Fe-4S dicluster domain
AM341_RS21845	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
AM341_RS21850	PF03264	NapC/NirT cytochrome c family, N-terminal region
AM341_RS21855	PF00005	ABC transporter
AM341_RS21860	PF03379	AM341_RS21860
AM341_RS21865	PF01578	AM341_RS21865
AM341_RS21870	PF04995	AM341_RS21870
AM341_RS21875	PF03100	CcmE
AM341_RS21880	PF01578	AM341_RS21880
AM341_RS21880	PF16327	AM341_RS21880
AM341_RS21885	PF08534	Redoxin
AM341_RS21890	PF03918	Cytochrome C biogenesis protein
AM341_RS21890	PF14559	Tetratricopeptide repeat
AM341_RS21895	PF00072	Response regulator receiver domain
AM341_RS21895	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS21905	PF03212	Pertactin
AM341_RS21905	PF03797	Autotransporter beta-domain
AM341_RS21905	PF16168	AM341_RS21905
AM341_RS21920	PF00884	Sulfatase
AM341_RS21920	PF11893	AM341_RS21920
AM341_RS21925	PF07208	Protein of unknown function (DUF1414)
AM341_RS21930	PF04245	AM341_RS21930
AM341_RS21935	PF01386	Ribosomal L25p family
AM341_RS21940	PF00271	Helicase conserved C-terminal domain
AM341_RS21940	PF04851	Type III restriction enzyme, res subunit
AM341_RS21950	PF00849	RNA pseudouridylate synthase
AM341_RS21950	PF01479	S4 domain
AM341_RS21955	PF07690	Major Facilitator Superfamily
AM341_RS21965	PF13989	AM341_RS21965
AM341_RS21970	PF00005	ABC transporter
AM341_RS21970	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AM341_RS21975	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS21975	PF12911	AM341_RS21975
AM341_RS21980	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS21985	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AM341_RS21990	PF00563	EAL domain
AM341_RS21990	PF12792	AM341_RS21990
AM341_RS21995	PF00877	NlpC/P60 family
AM341_RS22000	PF01569	PAP2 superfamily
AM341_RS22005	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AM341_RS22005	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AM341_RS22010	PF01232	Mannitol dehydrogenase Rossmann domain
AM341_RS22010	PF08125	Mannitol dehydrogenase C-terminal domain
AM341_RS22015	PF01132	Elongation factor P (EF-P) OB domain
AM341_RS22015	PF08207	Elongation factor P (EF-P) KOW-like domain
AM341_RS22015	PF09285	Elongation factor P, C-terminal
AM341_RS22020	PF03692	AM341_RS22020
AM341_RS22025	PF07690	Major Facilitator Superfamily
AM341_RS22030	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AM341_RS22030	PF00381	PTS HPr component phosphorylation site
AM341_RS22035	PF00294	pfkB family carbohydrate kinase
AM341_RS22040	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS22040	PF02378	Phosphotransferase system, EIIC
AM341_RS22045	PF00294	pfkB family carbohydrate kinase
AM341_RS22050	PF04227	Indigoidine synthase A like protein
AM341_RS22055	PF01773	Na+ dependent nucleoside transporter N-terminus
AM341_RS22055	PF07662	Na+ dependent nucleoside transporter C-terminus
AM341_RS22060	PF00027	Cyclic nucleotide-binding domain
AM341_RS22065	PF01156	Inosine-uridine preferring nucleoside hydrolase
AM341_RS22070	PF01773	Na+ dependent nucleoside transporter N-terminus
AM341_RS22070	PF07662	Na+ dependent nucleoside transporter C-terminus
AM341_RS22075	PF00294	pfkB family carbohydrate kinase
AM341_RS22075	PF13412	Winged helix-turn-helix DNA-binding
AM341_RS22080	PF01261	Xylose isomerase-like TIM barrel
AM341_RS22085	PF03601	AM341_RS22085
AM341_RS22090	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS22090	PF03466	LysR substrate binding domain
AM341_RS22100	PF00324	Amino acid permease
AM341_RS22110	PF00593	TonB dependent receptor
AM341_RS22110	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS22115	PF00756	Putative esterase
AM341_RS22130	PF01227	GTP cyclohydrolase I
AM341_RS22135	PF04235	AM341_RS22135
AM341_RS22145	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS22145	PF13377	Periplasmic binding protein-like domain
AM341_RS22150	PF13407	Periplasmic binding protein domain
AM341_RS22155	PF00005	ABC transporter
AM341_RS22160	PF02653	AM341_RS22160
AM341_RS22165	PF01180	Dihydroorotate dehydrogenase
AM341_RS22165	PF14697	4Fe-4S dicluster domain
AM341_RS22170	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AM341_RS22170	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AM341_RS22175	PF10808	AM341_RS22175
AM341_RS22180	PF02698	DUF218 domain
AM341_RS22185	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AM341_RS22185	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
AM341_RS22190	PF04172	AM341_RS22190
AM341_RS22195	PF03788	AM341_RS22195
AM341_RS22200	PF01207	Dihydrouridine synthase (Dus)
AM341_RS22220	PF02321	Outer membrane efflux protein
AM341_RS22225	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS22230	PF09335	AM341_RS22230
AM341_RS22235	PF06930	AM341_RS22235
AM341_RS22240	PF00768	D-alanyl-D-alanine carboxypeptidase
AM341_RS22245	PF01565	FAD binding domain
AM341_RS22245	PF09330	D-lactate dehydrogenase, membrane binding
AM341_RS22250	PF00933	Glycosyl hydrolase family 3 N terminal domain
AM341_RS22250	PF01915	Glycosyl hydrolase family 3 C-terminal domain
AM341_RS22250	PF14310	Fibronectin type III-like domain
AM341_RS22255	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AM341_RS22260	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS22265	PF00005	ABC transporter
AM341_RS22270	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS22280	PF13411	MerR HTH family regulatory protein
AM341_RS22285	PF06580	AM341_RS22285
AM341_RS22285	PF07694	5TMR of 5TMR-LYT
AM341_RS22290	PF00072	Response regulator receiver domain
AM341_RS22290	PF04397	LytTr DNA-binding domain
AM341_RS22295	PF07308	AM341_RS22295
AM341_RS22300	PF06998	Protein of unknown function (DUF1307)
AM341_RS22305	PF04434	AM341_RS22305
AM341_RS22310	PF05762	VWA domain containing CoxE-like protein
AM341_RS22320	PF07728	AAA domain (dynein-related subfamily)
AM341_RS22330	PF13569	AM341_RS22330
AM341_RS22340	PF01588	Putative tRNA binding domain
AM341_RS22340	PF09334	tRNA synthetases class I (M)
AM341_RS22345	PF10609	ParA/MinD ATPase like
AM341_RS22350	PF10836	AM341_RS22350
AM341_RS22360	PF00419	Fimbrial protein
AM341_RS22365	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AM341_RS22365	PF02753	Pili assembly chaperone PapD, C-terminal domain
AM341_RS22370	PF00577	Outer membrane usher protein
AM341_RS22370	PF13953	PapC C-terminal domain
AM341_RS22370	PF13954	PapC N-terminal domain
AM341_RS22375	PF00419	Fimbrial protein
AM341_RS22380	PF11776	Domain of unknown function (DUF3315)
AM341_RS22385	PF03824	AM341_RS22385
AM341_RS22390	PF02583	Metal-sensitive transcriptional repressor
AM341_RS22395	PF02110	Hydroxyethylthiazole kinase family
AM341_RS22400	PF08543	Phosphomethylpyrimidine kinase
AM341_RS22405	PF01183	Glycosyl hydrolases family 25
AM341_RS22410	PF00392	Bacterial regulatory proteins, gntR family
AM341_RS22410	PF07702	UTRA domain
AM341_RS22415	PF00294	pfkB family carbohydrate kinase
AM341_RS22420	PF03747	ADP-ribosylglycohydrolase
AM341_RS22425	PF03825	AM341_RS22425
AM341_RS22430	PF01791	DeoC/LacD family aldolase
AM341_RS22435	PF07690	Major Facilitator Superfamily
AM341_RS22440	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS22440	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS22445	PF00106	short chain dehydrogenase
AM341_RS22450	PF00356	Bacterial regulatory proteins, lacI family
AM341_RS22450	PF13407	Periplasmic binding protein domain
AM341_RS22455	PF04198	Putative sugar-binding domain
AM341_RS22460	PF01232	Mannitol dehydrogenase Rossmann domain
AM341_RS22460	PF08125	Mannitol dehydrogenase C-terminal domain
AM341_RS22465	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AM341_RS22465	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AM341_RS22470	PF07690	Major Facilitator Superfamily
AM341_RS22475	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS22480	PF00781	Diacylglycerol kinase catalytic domain
AM341_RS22495	PF01136	AM341_RS22495
AM341_RS22495	PF16325	AM341_RS22495
AM341_RS22500	PF07411	Domain of unknown function (DUF1508)
AM341_RS22505	PF00072	Response regulator receiver domain
AM341_RS22505	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS22510	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS22510	PF00672	HAMP domain
AM341_RS22510	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS22515	PF07690	Major Facilitator Superfamily
AM341_RS22520	PF00873	AcrB/AcrD/AcrF family
AM341_RS22525	PF00873	AcrB/AcrD/AcrF family
AM341_RS22530	PF13437	HlyD family secretion protein
AM341_RS22530	PF13533	Biotin-lipoyl like
AM341_RS22535	PF13956	AM341_RS22535
AM341_RS22540	PF00092	von Willebrand factor type A domain
AM341_RS22545	PF13672	Protein phosphatase 2C
AM341_RS22550	PF10077	AM341_RS22550
AM341_RS22560	PF00012	Hsp70 protein
AM341_RS22565	PF00730	HhH-GPD superfamily base excision DNA repair protein
AM341_RS22565	PF06029	AlkA N-terminal domain
AM341_RS22570	PF00563	EAL domain
AM341_RS22570	PF00990	GGDEF domain
AM341_RS22570	PF05231	AM341_RS22570
AM341_RS22570	PF08447	PAS fold
AM341_RS22570	PF08448	PAS fold
AM341_RS22570	PF13426	PAS domain
AM341_RS22575	PF00485	Phosphoribulokinase / Uridine kinase family
AM341_RS22580	PF00692	dUTPase
AM341_RS22585	PF05170	AM341_RS22585
AM341_RS22590	PF13744	Helix-turn-helix domain
AM341_RS22595	PF05973	AM341_RS22595
AM341_RS22600	PF00571	CBS domain
AM341_RS22600	PF03471	Transporter associated domain
AM341_RS22600	PF03741	AM341_RS22600
AM341_RS22610	PF01569	PAP2 superfamily
AM341_RS22625	PF14052	Capsule assembly protein Wzi
AM341_RS22630	PF02563	Polysaccharide biosynthesis/export protein
AM341_RS22630	PF10531	SLBB domain
AM341_RS22635	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AM341_RS22640	PF02706	Chain length determinant protein
AM341_RS22640	PF13614	AAA domain
AM341_RS22640	PF13807	AM341_RS22640
AM341_RS22645	PF02397	AM341_RS22645
AM341_RS22650	PF00535	Glycosyl transferase family 2
AM341_RS22660	PF04230	AM341_RS22660
AM341_RS22665	PF00534	Glycosyl transferases group 1
AM341_RS22685	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AM341_RS22685	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AM341_RS22700	PF16363	AM341_RS22700
AM341_RS22705	PF00483	Nucleotidyl transferase
AM341_RS22710	PF04321	RmlD substrate binding domain
AM341_RS22715	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
AM341_RS22720	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AM341_RS22720	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AM341_RS22745	PF01061	AM341_RS22745
AM341_RS22750	PF00005	ABC transporter
AM341_RS22750	PF14524	Wzt C-terminal domain
AM341_RS22755	PF00069	Protein kinase domain
AM341_RS22755	PF13847	Methyltransferase domain
AM341_RS22760	PF00534	Glycosyl transferases group 1
AM341_RS22765	PF00534	Glycosyl transferases group 1
AM341_RS22770	PF00534	Glycosyl transferases group 1
AM341_RS22770	PF13439	Glycosyltransferase Family 4
AM341_RS22775	PF01502	Phosphoribosyl-AMP cyclohydrolase
AM341_RS22775	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AM341_RS22780	PF00977	Histidine biosynthesis protein
AM341_RS22785	PF00977	Histidine biosynthesis protein
AM341_RS22790	PF00117	Glutamine amidotransferase class-I
AM341_RS22795	PF00475	Imidazoleglycerol-phosphate dehydratase
AM341_RS22795	PF08645	Polynucleotide kinase 3 phosphatase
AM341_RS22800	PF00155	Aminotransferase class I and II
AM341_RS22805	PF00815	Histidinol dehydrogenase
AM341_RS22810	PF01634	ATP phosphoribosyltransferase
AM341_RS22810	PF08029	HisG, C-terminal domain
AM341_RS22820	PF08047	AM341_RS22820
AM341_RS22825	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
AM341_RS22830	PF06769	Plasmid encoded toxin Txe
AM341_RS22835	PF01370	NAD dependent epimerase/dehydratase family
AM341_RS22840	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS22840	PF03466	LysR substrate binding domain
AM341_RS22850	PF13520	Amino acid permease
AM341_RS22855	PF04143	AM341_RS22855
AM341_RS22860	PF01206	Sulfurtransferase TusA
AM341_RS22865	PF00929	Exonuclease
AM341_RS22865	PF08411	Exonuclease C-terminal
AM341_RS22870	PF00768	D-alanyl-D-alanine carboxypeptidase
AM341_RS22870	PF07943	Penicillin-binding protein 5, C-terminal domain
AM341_RS22875	PF01610	AM341_RS22875
AM341_RS22875	PF13542	AM341_RS22875
AM341_RS22875	PF14690	AM341_RS22875
AM341_RS22880	PF06445	GyrI-like small molecule binding domain
AM341_RS22885	PF04632	AM341_RS22885
AM341_RS22890	PF04363	AM341_RS22890
AM341_RS22895	PF10662	Ethanolamine utilisation - propanediol utilisation
AM341_RS22910	PF06755	AM341_RS22910
AM341_RS22915	PF06154	YagB/YeeU/YfjZ family
AM341_RS22920	PF06174	AM341_RS22920
AM341_RS22925	PF04002	RadC-like JAB domain
AM341_RS22930	PF03230	Antirestriction protein
AM341_RS22935	PF06067	AM341_RS22935
AM341_RS22965	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
AM341_RS22970	PF02654	AM341_RS22970
AM341_RS22975	PF02277	Phosphoribosyltransferase
AM341_RS22980	PF03734	L,D-transpeptidase catalytic domain
AM341_RS22995	PF05069	AM341_RS22995
AM341_RS23015	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AM341_RS23020	PF13175	AAA ATPase domain
AM341_RS23030	PF16263	AM341_RS23030
AM341_RS23035	PF13476	AAA domain
AM341_RS23050	PF04471	Restriction endonuclease
AM341_RS23060	PF04002	RadC-like JAB domain
AM341_RS23065	PF08401	AM341_RS23065
AM341_RS23075	PF12696	TraM recognition site of TraD and TraG
AM341_RS23095	PF07424	AM341_RS23095
AM341_RS23105	PF00437	Type II/IV secretion system protein
AM341_RS23110	PF03743	Bacterial conjugation TrbI-like protein
AM341_RS23115	PF03524	Conjugal transfer protein
AM341_RS23120	PF04335	VirB8 protein
AM341_RS23125	PF04610	AM341_RS23125
AM341_RS23135	PF07996	Type IV secretion system proteins
AM341_RS23140	PF03135	AM341_RS23140
AM341_RS23140	PF05101	AM341_RS23140
AM341_RS23145	PF04956	AM341_RS23145
AM341_RS23150	PF01464	Transglycosylase SLT domain
AM341_RS23160	PF05321	Haemolysin expression modulating protein
AM341_RS23165	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AM341_RS23170	PF11198	AM341_RS23170
AM341_RS23180	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AM341_RS23190	PF00593	TonB dependent receptor
AM341_RS23190	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS23195	PF00501	AMP-binding enzyme
AM341_RS23195	PF13193	AMP-binding enzyme C-terminal domain
AM341_RS23200	PF00975	Thioesterase domain
AM341_RS23205	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AM341_RS23210	PF00109	Beta-ketoacyl synthase, N-terminal domain
AM341_RS23210	PF00550	Phosphopantetheine attachment site
AM341_RS23210	PF00668	Condensation domain
AM341_RS23210	PF00698	Acyl transferase domain
AM341_RS23210	PF00975	Thioesterase domain
AM341_RS23210	PF02801	Beta-ketoacyl synthase, C-terminal domain
AM341_RS23210	PF08242	Methyltransferase domain
AM341_RS23210	PF08659	KR domain
AM341_RS23210	PF16197	AM341_RS23210
AM341_RS23215	PF00501	AMP-binding enzyme
AM341_RS23215	PF00550	Phosphopantetheine attachment site
AM341_RS23215	PF00668	Condensation domain
AM341_RS23215	PF08242	Methyltransferase domain
AM341_RS23220	PF12833	Helix-turn-helix domain
AM341_RS23225	PF00005	ABC transporter
AM341_RS23225	PF00664	ABC transporter transmembrane region
AM341_RS23230	PF00005	ABC transporter
AM341_RS23230	PF00664	ABC transporter transmembrane region
AM341_RS23235	PF07690	Major Facilitator Superfamily
AM341_RS23240	PF00425	chorismate binding enzyme
AM341_RS23245	PF00589	Phage integrase family
AM341_RS23245	PF13356	Domain of unknown function (DUF4102)
AM341_RS23255	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS23255	PF03466	LysR substrate binding domain
AM341_RS23260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS23260	PF03466	LysR substrate binding domain
AM341_RS23270	PF01554	MatE
AM341_RS23285	PF01709	Transcriptional regulator
AM341_RS23290	PF01048	Phosphorylase superfamily
AM341_RS23290	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus
AM341_RS23295	PF00083	Sugar (and other) transporter
AM341_RS23295	PF07690	Major Facilitator Superfamily
AM341_RS23300	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AM341_RS23305	PF02369	Bacterial Ig-like domain (group 1)
AM341_RS23305	PF09134	Invasin, domain 3
AM341_RS23305	PF11924	Protein of unknown function (DUF3442)
AM341_RS23315	PF06167	Glucose-regulated metallo-peptidase M90
AM341_RS23330	PF01292	Prokaryotic cytochrome b561
AM341_RS23335	PF09223	YodA lipocalin-like domain
AM341_RS23340	PF01794	AM341_RS23340
AM341_RS23345	PF00174	Oxidoreductase molybdopterin binding domain
AM341_RS23350	PF00576	HIUase/Transthyretin family
AM341_RS23355	PF00072	Response regulator receiver domain
AM341_RS23355	PF00486	Transcriptional regulatory protein, C terminal
AM341_RS23360	PF00512	His Kinase A (phospho-acceptor) domain
AM341_RS23360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS23375	PF00267	Gram-negative porin
AM341_RS23385	PF01966	HD domain
AM341_RS23390	PF00145	C-5 cytosine-specific DNA methylase
AM341_RS23395	PF03852	DNA mismatch endonuclease Vsr
AM341_RS23400	PF00892	EamA-like transporter family
AM341_RS23405	PF05661	AM341_RS23405
AM341_RS23410	PF09926	AM341_RS23410
AM341_RS23425	PF08282	haloacid dehalogenase-like hydrolase
AM341_RS23430	PF10733	AM341_RS23430
AM341_RS23435	PF10781	AM341_RS23435
AM341_RS23440	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS23445	PF01311	AM341_RS23445
AM341_RS23450	PF01313	AM341_RS23450
AM341_RS23455	PF00813	AM341_RS23455
AM341_RS23460	PF04347	AM341_RS23460
AM341_RS23465	PF01052	Surface presentation of antigens (SPOA)
AM341_RS23465	PF16973	AM341_RS23465
AM341_RS23470	PF01052	Surface presentation of antigens (SPOA)
AM341_RS23470	PF02154	Flagellar motor switch protein FliM
AM341_RS23475	PF03748	AM341_RS23475
AM341_RS23480	PF02120	Flagellar hook-length control protein FliK
AM341_RS23485	PF02050	Flagellar FliJ protein
AM341_RS23490	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AM341_RS23495	PF02108	AM341_RS23495
AM341_RS23500	PF01706	FliG C-terminal domain
AM341_RS23500	PF14841	FliG middle domain
AM341_RS23500	PF14842	FliG N-terminal domain
AM341_RS23505	PF01514	Secretory protein of YscJ/FliF family
AM341_RS23505	PF08345	AM341_RS23505
AM341_RS23510	PF02049	AM341_RS23510
AM341_RS23520	PF17607	AM341_RS23520
AM341_RS23530	PF02586	Uncharacterised ACR, COG2135
AM341_RS23535	PF01206	Sulfurtransferase TusA
AM341_RS23540	PF04143	AM341_RS23540
AM341_RS23550	PF13987	YedD-like protein
AM341_RS23555	PF00128	Alpha amylase, catalytic domain
AM341_RS23555	PF02806	Alpha amylase, C-terminal all-beta domain
AM341_RS23560	PF05400	Flagellar protein FliT
AM341_RS23565	PF02561	Flagellar protein FliS
AM341_RS23570	PF02465	AM341_RS23570
AM341_RS23570	PF07195	AM341_RS23570
AM341_RS23580	PF00669	Bacterial flagellin N-terminal helical region
AM341_RS23580	PF00700	Bacterial flagellin C-terminal helical region
AM341_RS23580	PF12445	AM341_RS23580
AM341_RS23585	PF04539	Sigma-70 region 3
AM341_RS23585	PF04542	Sigma-70 region 2
AM341_RS23585	PF04545	Sigma-70, region 4
AM341_RS23590	PF02899	Phage integrase, N-terminal SAM-like domain
AM341_RS23595	PF00497	Bacterial extracellular solute-binding proteins, family 3
AM341_RS23600	PF00291	Pyridoxal-phosphate dependent enzyme
AM341_RS23605	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS23610	PF00005	ABC transporter
AM341_RS23615	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS23615	PF03472	Autoinducer binding domain
AM341_RS23620	PF10769	AM341_RS23620
AM341_RS23630	PF00072	Response regulator receiver domain
AM341_RS23630	PF00196	Bacterial regulatory proteins, luxR family
AM341_RS23635	PF01541	GIY-YIG catalytic domain
AM341_RS23635	PF02151	UvrB/uvrC motif
AM341_RS23635	PF08459	UvrC Helix-hairpin-helix N-terminal
AM341_RS23635	PF14520	Helix-hairpin-helix domain
AM341_RS23640	PF01066	CDP-alcohol phosphatidyltransferase
AM341_RS23660	PF02810	SEC-C motif
AM341_RS23660	PF03695	Uncharacterised protein family (UPF0149)
AM341_RS23665	PF03222	Tryptophan/tyrosine permease family
AM341_RS23670	PF10678	AM341_RS23670
AM341_RS23675	PF00210	Ferritin-like domain
AM341_RS23680	PF13992	AM341_RS23680
AM341_RS23690	PF10964	AM341_RS23690
AM341_RS23695	PF00210	Ferritin-like domain
AM341_RS23705	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AM341_RS23710	PF00005	ABC transporter
AM341_RS23715	PF02653	AM341_RS23715
AM341_RS23720	PF02358	Trehalose-phosphatase
AM341_RS23725	PF00982	Glycosyltransferase family 20
AM341_RS23730	PF00582	Universal stress protein family
AM341_RS23735	PF05247	Flagellar transcriptional activator (FlhD)
AM341_RS23740	PF05280	Flagellar transcriptional activator (FlhC)
AM341_RS23745	PF01618	AM341_RS23745
AM341_RS23750	PF00691	OmpA family
AM341_RS23750	PF13677	AM341_RS23750
AM341_RS23755	PF01584	CheW-like domain
AM341_RS23755	PF01627	Hpt domain
AM341_RS23755	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AM341_RS23755	PF02895	Signal transducing histidine kinase, homodimeric domain
AM341_RS23755	PF09078	CheY binding
AM341_RS23760	PF01584	CheW-like domain
AM341_RS23765	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AM341_RS23765	PF00672	HAMP domain
AM341_RS23765	PF02203	Tar ligand binding domain homologue
AM341_RS23770	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AM341_RS23770	PF00672	HAMP domain
AM341_RS23770	PF02203	Tar ligand binding domain homologue
AM341_RS23775	PF01739	CheR methyltransferase, SAM binding domain
AM341_RS23775	PF03705	CheR methyltransferase, all-alpha domain
AM341_RS23780	PF00072	Response regulator receiver domain
AM341_RS23780	PF01339	CheB methylesterase
AM341_RS23785	PF00072	Response regulator receiver domain
AM341_RS23790	PF04344	Chemotaxis phosphatase, CheZ
AM341_RS23795	PF01312	FlhB HrpN YscU SpaS Family
AM341_RS23800	PF00771	FHIPEP family
AM341_RS23805	PF06366	AM341_RS23805
AM341_RS23810	PF07007	Protein of unknown function (DUF1311)
AM341_RS23815	PF00750	tRNA synthetases class I (R)
AM341_RS23815	PF03485	Arginyl tRNA synthetase N terminal domain
AM341_RS23815	PF05746	DALR anticodon binding domain
AM341_RS23825	PF06185	YecM protein
AM341_RS23830	PF03932	CutC family
AM341_RS23835	PF03264	NapC/NirT cytochrome c family, N-terminal region
AM341_RS23840	PF00384	Molybdopterin oxidoreductase
AM341_RS23840	PF01568	Molydopterin dinucleotide binding domain
AM341_RS23845	PF08003	Protein of unknown function (DUF1698)
AM341_RS23850	PF13649	Methyltransferase domain
AM341_RS23855	PF01124	MAPEG family
AM341_RS23860	PF01904	Protein of unknown function DUF72
AM341_RS23865	PF00857	Isochorismatase family
AM341_RS23870	PF00152	tRNA synthetases class II (D, K and N)
AM341_RS23870	PF01336	OB-fold nucleic acid binding domain
AM341_RS23870	PF02938	GAD domain
AM341_RS23875	PF00293	NUDIX domain
AM341_RS23880	PF01709	Transcriptional regulator
AM341_RS23885	PF02075	Crossover junction endodeoxyribonuclease RuvC
AM341_RS23890	PF05708	Orthopoxvirus protein of unknown function (DUF830)
AM341_RS23900	PF01330	RuvA N terminal domain
AM341_RS23900	PF07499	RuvA, C-terminal domain
AM341_RS23900	PF14520	Helix-hairpin-helix domain
AM341_RS23905	PF05491	Holliday junction DNA helicase ruvB C-terminus
AM341_RS23905	PF05496	Holliday junction DNA helicase ruvB N-terminus
AM341_RS23910	PF00950	AM341_RS23910
AM341_RS23915	PF00005	ABC transporter
AM341_RS23920	PF01297	Periplasmic solute binding protein family
AM341_RS23925	PF01476	LysM domain
AM341_RS23925	PF01551	Peptidase family M23
AM341_RS23925	PF08525	AM341_RS23925
AM341_RS23930	PF03279	AM341_RS23930
AM341_RS23935	PF00224	Pyruvate kinase, barrel domain
AM341_RS23935	PF02887	Pyruvate kinase, alpha/beta domain
AM341_RS23940	PF01380	SIS domain
AM341_RS23940	PF01418	Helix-turn-helix domain, rpiR family
AM341_RS23945	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AM341_RS23945	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AM341_RS23950	PF00920	Dehydratase family
AM341_RS23955	PF01081	KDPG and KHG aldolase
AM341_RS23960	PF02222	ATP-grasp domain
AM341_RS23965	PF07130	YebG protein
AM341_RS23970	PF13995	YebF-like protein
AM341_RS23975	PF04391	AM341_RS23975
AM341_RS23980	PF00326	Prolyl oligopeptidase family
AM341_RS23980	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AM341_RS23985	PF00929	Exonuclease
AM341_RS23990	PF00795	Carbon-nitrogen hydrolase
AM341_RS23995	PF06440	DNA polymerase III, theta subunit
AM341_RS24000	PF04234	CopC domain
AM341_RS24005	PF05425	AM341_RS24005
AM341_RS24010	PF10709	AM341_RS24010
AM341_RS24015	PF00149	Calcineurin-like phosphoesterase
AM341_RS24020	PF07358	AM341_RS24020
AM341_RS24025	PF07351	AM341_RS24025
AM341_RS24030	PF01189	NOL1/NOP2/sun family
AM341_RS24030	PF13636	pre-rRNA processing and ribosome biogenesis
AM341_RS24030	PF17125	AM341_RS24030
AM341_RS24035	PF02470	AM341_RS24035
AM341_RS24040	PF04403	AM341_RS24040
AM341_RS24045	PF13185	GAF domain
AM341_RS24050	PF04352	ProQ/FINO family
AM341_RS24050	PF17516	AM341_RS24050
AM341_RS24055	PF00595	PDZ domain (Also known as DHR or GLGF)
AM341_RS24055	PF03572	Peptidase family S41
AM341_RS24055	PF11818	AM341_RS24055
AM341_RS24060	PF01435	Peptidase family M48
AM341_RS24065	PF07690	Major Facilitator Superfamily
AM341_RS24070	PF01614	Bacterial transcriptional regulator
AM341_RS24070	PF09339	IclR helix-turn-helix domain
AM341_RS24075	PF13996	AM341_RS24075
AM341_RS24080	PF13998	AM341_RS24080
AM341_RS24085	PF13974	AM341_RS24085
AM341_RS24095	PF10736	AM341_RS24095
AM341_RS24100	PF00313	'Cold-shock' DNA-binding domain
AM341_RS24105	PF13847	Methyltransferase domain
AM341_RS24110	PF02659	AM341_RS24110
AM341_RS24120	PF06173	AM341_RS24120
AM341_RS24125	PF03613	AM341_RS24125
AM341_RS24130	PF03609	AM341_RS24130
AM341_RS24135	PF03610	PTS system fructose IIA component
AM341_RS24135	PF03830	PTS system sorbose subfamily IIB component
AM341_RS24150	PF03471	Transporter associated domain
AM341_RS24150	PF03741	AM341_RS24150
AM341_RS24155	PF00563	EAL domain
AM341_RS24155	PF12792	AM341_RS24155
AM341_RS24160	PF03313	AM341_RS24160
AM341_RS24160	PF03315	Serine dehydratase beta chain
AM341_RS24165	PF00293	NUDIX domain
AM341_RS24170	PF00425	chorismate binding enzyme
AM341_RS24170	PF04715	Anthranilate synthase component I, N terminal region
AM341_RS24175	PF03701	AM341_RS24175
AM341_RS24180	PF08986	Domain of unknown function (DUF1889)
AM341_RS24185	PF01042	Endoribonuclease L-PSP
AM341_RS24190	PF04851	Type III restriction enzyme, res subunit
AM341_RS24190	PF13307	Helicase C-terminal domain
AM341_RS24195	PF00814	Glycoprotease family
AM341_RS24200	PF03843	AM341_RS24200
AM341_RS24205	PF00501	AMP-binding enzyme
AM341_RS24205	PF13193	AMP-binding enzyme C-terminal domain
AM341_RS24210	PF00570	HRDC domain
AM341_RS24210	PF01612	3'-5' exonuclease
AM341_RS24215	PF00111	2Fe-2S iron-sulfur cluster binding domain
AM341_RS24215	PF00175	Oxidoreductase NAD-binding domain
AM341_RS24215	PF00970	Oxidoreductase FAD-binding domain
AM341_RS24220	PF00355	Rieske [2Fe-2S] domain
AM341_RS24220	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
AM341_RS24225	PF02028	BCCT family transporter
AM341_RS24230	PF00180	Isocitrate/isopropylmalate dehydrogenase
AM341_RS24235	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AM341_RS24235	PF03466	LysR substrate binding domain
AM341_RS24240	PF01810	AM341_RS24240
AM341_RS24245	PF09313	Domain of unknown function (DUF1971)
AM341_RS24250	PF08956	Domain of unknown function (DUF1869)
AM341_RS24255	PF04226	AM341_RS24255
AM341_RS24270	PF00990	GGDEF domain
AM341_RS24270	PF13185	GAF domain
AM341_RS24275	PF03891	AM341_RS24275
AM341_RS24280	PF04343	AM341_RS24280
AM341_RS24285	PF07690	Major Facilitator Superfamily
AM341_RS24290	PF02311	AraC-like ligand binding domain
AM341_RS24290	PF12833	Helix-turn-helix domain
AM341_RS24295	PF04284	AM341_RS24295
AM341_RS24305	PF04073	Aminoacyl-tRNA editing domain
AM341_RS24310	PF00990	GGDEF domain
AM341_RS24310	PF17155	AM341_RS24310
AM341_RS24315	PF00990	GGDEF domain
AM341_RS24315	PF17158	AM341_RS24315
AM341_RS24325	PF06798	AM341_RS24325
AM341_RS24325	PF08298	PrkA AAA domain
AM341_RS24330	PF06629	AM341_RS24330
AM341_RS24335	PF00248	Aldo/keto reductase family
AM341_RS24340	PF01263	Aldose 1-epimerase
AM341_RS24345	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM341_RS24345	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AM341_RS24350	PF01641	SelR domain
AM341_RS24355	PF07023	AM341_RS24355
AM341_RS24360	PF00107	Zinc-binding dehydrogenase
AM341_RS24360	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS24365	PF00083	Sugar (and other) transporter
AM341_RS24370	PF00107	Zinc-binding dehydrogenase
AM341_RS24370	PF08240	Alcohol dehydrogenase GroES-like domain
AM341_RS24375	PF01116	Fructose-bisphosphate aldolase class-II
AM341_RS24380	PF00294	pfkB family carbohydrate kinase
AM341_RS24385	PF00248	Aldo/keto reductase family
AM341_RS24390	PF00455	AM341_RS24390
AM341_RS24390	PF08220	DeoR-like helix-turn-helix domain
AM341_RS24395	PF00083	Sugar (and other) transporter
AM341_RS24400	PF00857	Isochorismatase family
AM341_RS24405	PF00710	Asparaginase
AM341_RS24410	PF01343	Peptidase family S49
AM341_RS24420	PF00881	Nitroreductase family
AM341_RS24430	PF00586	AIR synthase related protein, N-terminal domain
AM341_RS24430	PF02769	AIR synthase related protein, C-terminal domain
AM341_RS24435	PF01131	DNA topoisomerase
AM341_RS24435	PF01751	Toprim domain
AM341_RS24440	PF06889	AM341_RS24440
AM341_RS24445	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AM341_RS24445	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AM341_RS24450	PF07383	AM341_RS24450
AM341_RS24455	PF00293	NUDIX domain
AM341_RS24460	PF01066	CDP-alcohol phosphatidyltransferase
AM341_RS24465	PF00581	Rhodanese-like domain
AM341_RS24470	PF00005	ABC transporter
AM341_RS24475	PF00528	Binding-protein-dependent transport system inner membrane component
AM341_RS24480	PF13416	Bacterial extracellular solute-binding protein
AM341_RS24485	PF02627	Carboxymuconolactone decarboxylase family
AM341_RS24490	PF09335	AM341_RS24490
AM341_RS24500	PF09335	AM341_RS24500
AM341_RS24505	PF03372	Endonuclease/Exonuclease/phosphatase family
AM341_RS24515	PF00202	Aminotransferase class-III
AM341_RS24520	PF04958	Arginine N-succinyltransferase beta subunit
AM341_RS24525	PF00171	Aldehyde dehydrogenase family
AM341_RS24530	PF04996	Succinylarginine dihydrolase
AM341_RS24535	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AM341_RS24540	PF07813	LTXXQ motif family protein
AM341_RS24545	PF05962	HutD
AM341_RS24555	PF02540	NAD synthase
AM341_RS24560	PF04355	SmpA / OmlA family
AM341_RS24570	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AM341_RS24575	PF02378	Phosphotransferase system, EIIC
AM341_RS24580	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
AM341_RS24585	PF07883	Cupin domain
AM341_RS24585	PF12833	Helix-turn-helix domain
AM341_RS24590	PF02056	Family 4 glycosyl hydrolase
AM341_RS24590	PF11975	Family 4 glycosyl hydrolase C-terminal domain
AM341_RS24595	PF04794	YdjC-like protein
AM341_RS24600	PF00199	Catalase
AM341_RS24600	PF06628	Catalase-related immune-responsive
AM341_RS24605	PF10729	Cell division activator CedA
AM341_RS24615	PF00375	Sodium:dicarboxylate symporter family
AM341_RS24620	PF04307	AM341_RS24620
AM341_RS24625	PF13419	Haloacid dehalogenase-like hydrolase
AM341_RS24630	PF14002	AM341_RS24630
AM341_RS24635	PF03881	Fructosamine kinase
AM341_RS24640	PF11080	Protein of unknown function (DUF2622)
AM341_RS24645	PF00294	pfkB family carbohydrate kinase
AM341_RS24650	PF04338	Protein of unknown function, DUF481
AM341_RS24660	PF07906	AM341_RS24660
AM341_RS24670	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AM341_RS24670	PF02824	TGS domain
AM341_RS24670	PF03129	Anticodon binding domain
AM341_RS24670	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AM341_RS24675	PF00707	Translation initiation factor IF-3, C-terminal domain
AM341_RS24675	PF05198	Translation initiation factor IF-3, N-terminal domain
AM341_RS24680	PF01632	Ribosomal protein L35
AM341_RS24685	PF00453	Ribosomal protein L20
AM341_RS24690	PF01409	tRNA synthetases class II core domain (F)
AM341_RS24690	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AM341_RS24695	PF01588	Putative tRNA binding domain
AM341_RS24695	PF03147	Ferredoxin-fold anticodon binding domain
AM341_RS24695	PF03483	B3/4 domain
AM341_RS24695	PF03484	tRNA synthetase B5 domain
AM341_RS24700	PF00216	Bacterial DNA-binding protein
AM341_RS24705	PF01032	FecCD transport family
AM341_RS24710	PF00255	Glutathione peroxidase
AM341_RS24715	PF00005	ABC transporter
AM341_RS24720	PF00877	NlpC/P60 family
AM341_RS24725	PF00563	EAL domain
AM341_RS24735	PF09679	AM341_RS24735
AM341_RS24740	PF13728	F plasmid transfer operon protein
AM341_RS24755	PF06122	AM341_RS24755
AM341_RS24760	PF07916	AM341_RS24760
AM341_RS24770	PF05818	AM341_RS24770
AM341_RS24775	PF10412	Type IV secretion-system coupling protein DNA-binding domain
AM341_RS24775	PF12615	AM341_RS24775
AM341_RS24780	PF07057	DNA helicase TraI
AM341_RS24780	PF08751	TrwC relaxase
AM341_RS24780	PF13604	AAA domain
AM341_RS24785	PF05857	AM341_RS24785
AM341_RS24790	PF04352	ProQ/FINO family
AM341_RS24790	PF12602	Fertility inhibition protein N terminal
AM341_RS24805	PF03400	AM341_RS24805
AM341_RS24810	PF01527	Transposase
AM341_RS24815	PF05717	AM341_RS24815
AM341_RS24820	PF03050	AM341_RS24820
AM341_RS24820	PF13005	AM341_RS24820
AM341_RS24820	PF13007	AM341_RS24820
AM341_RS24820	PF13817	AM341_RS24820
AM341_RS24845	PF01848	AM341_RS24845
AM341_RS24850	PF10723	Replication regulatory protein RepB
AM341_RS24860	PF08048	AM341_RS24860
AM341_RS24875	PF02274	Amidinotransferase
AM341_RS24880	PF00696	Amino acid kinase family
AM341_RS24885	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AM341_RS24885	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AM341_RS24890	PF03606	AM341_RS24890
AM341_RS24895	PF01316	Arginine repressor, DNA binding domain
AM341_RS24895	PF02863	Arginine repressor, C-terminal domain
AM341_RS24910	PF05717	AM341_RS24910
AM341_RS24915	PF01527	Transposase
AM341_RS24930	PF10881	AM341_RS24930
AM341_RS24940	PF01548	AM341_RS24940
AM341_RS24940	PF02371	AM341_RS24940
AM341_RS24950	PF10723	Replication regulatory protein RepB
AM341_RS24960	PF08048	AM341_RS24960
AM341_RS24965	PF02387	AM341_RS24965
AM341_RS24975	PF02517	CAAX protease self-immunity
AM341_RS24980	PF02452	PemK-like protein
AM341_RS24985	PF01526	AM341_RS24985
AM341_RS24985	PF13700	AM341_RS24985
AM341_RS24990	PF00239	Resolvase, N terminal domain
AM341_RS24990	PF13384	Homeodomain-like domain
AM341_RS25000	PF00857	Isochorismatase family
AM341_RS25005	PF00892	EamA-like transporter family
AM341_RS25010	PF07690	Major Facilitator Superfamily
AM341_RS25015	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS25015	PF02909	Tetracyclin repressor, C-terminal all-alpha domain
AM341_RS25030	PF13610	AM341_RS25030
AM341_RS25040	PF02566	OsmC-like protein
AM341_RS25045	PF00440	Bacterial regulatory proteins, tetR family
AM341_RS25050	PF02627	Carboxymuconolactone decarboxylase family
AM341_RS25055	PF00085	Thioredoxin
AM341_RS25060	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AM341_RS25065	PF01323	DSBA-like thioredoxin domain
AM341_RS25070	PF13561	Enoyl-(Acyl carrier protein) reductase
AM341_RS25075	PF00155	Aminotransferase class I and II
AM341_RS25080	PF00892	EamA-like transporter family
AM341_RS25085	PF12146	Putative lysophospholipase
AM341_RS25100	PF03797	Autotransporter beta-domain
AM341_RS25110	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
AM341_RS25110	PF08388	AM341_RS25110
AM341_RS25140	PF00593	TonB dependent receptor
AM341_RS25150	PF13610	AM341_RS25150
AM341_RS25165	PF00328	Histidine phosphatase superfamily (branch 2)
AM341_RS25175	PF08534	Redoxin
AM341_RS25180	PF00005	ABC transporter
AM341_RS25185	PF02687	AM341_RS25185
AM341_RS25185	PF12704	MacB-like periplasmic core domain
AM341_RS25190	PF02687	AM341_RS25190
AM341_RS25190	PF12704	MacB-like periplasmic core domain
AM341_RS25195	PF04945	YHS domain
AM341_RS25195	PF10080	AM341_RS25195
AM341_RS25200	PF10634	Fe2+ transport protein
AM341_RS25205	PF03239	AM341_RS25205
AM341_RS25215	PF04205	FMN-binding domain
AM341_RS25220	PF08534	Redoxin
AM341_RS25225	PF01323	DSBA-like thioredoxin domain
AM341_RS25250	PF13610	AM341_RS25250
AM341_RS25255	PF13700	AM341_RS25255
AM341_RS25260	PF13701	AM341_RS25260
AM341_RS25265	PF13354	Beta-lactamase enzyme family
AM341_RS25280	PF13610	AM341_RS25280
AM341_RS25290	PF13238	AAA domain
AM341_RS25295	PF02522	Aminoglycoside 3-N-acetyltransferase
AM341_RS25300	PF13610	AM341_RS25300
AM341_RS25310	PF00905	Penicillin binding protein transpeptidase domain
AM341_RS25315	PF13523	Acetyltransferase (GNAT) domain
AM341_RS25320	PF13610	AM341_RS25320
AM341_RS25325	PF05717	AM341_RS25325
AM341_RS25340	PF00665	Integrase core domain
AM341_RS25340	PF02796	Helix-turn-helix domain of resolvase
AM341_RS25345	PF01695	IstB-like ATP binding protein
AM341_RS25355	PF10670	AM341_RS25355
AM341_RS25360	PF00593	TonB dependent receptor
AM341_RS25360	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS25370	PF03333	Adhesin biosynthesis transcription regulatory protein
AM341_RS25390	PF00589	Phage integrase family
AM341_RS25395	PF01051	Initiator Replication protein
AM341_RS25435	PF01297	Periplasmic solute binding protein family
AM341_RS25440	PF00005	ABC transporter
AM341_RS25445	PF00950	AM341_RS25445
AM341_RS25450	PF00950	AM341_RS25450
AM341_RS25470	PF02537	AM341_RS25470
AM341_RS25475	PF07690	Major Facilitator Superfamily
AM341_RS25480	PF04183	IucA / IucC family
AM341_RS25480	PF06276	Ferric iron reductase FhuF-like transporter
AM341_RS25485	PF13523	Acetyltransferase (GNAT) domain
AM341_RS25490	PF04183	IucA / IucC family
AM341_RS25490	PF06276	Ferric iron reductase FhuF-like transporter
AM341_RS25495	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
AM341_RS25500	PF00593	TonB dependent receptor
AM341_RS25500	PF07715	TonB-dependent Receptor Plug Domain
AM341_RS25530	PF13175	AAA ATPase domain
AM341_RS25535	PF01850	PIN domain
AM341_RS25540	PF04014	Antidote-toxin recognition MazE
AM341_RS25550	PF07362	Post-segregation antitoxin CcdA
AM341_RS25555	PF01845	CcdB protein
AM341_RS25560	PF00589	Phage integrase family
AM341_RS25565	PF01051	Initiator Replication protein
AM341_RS25570	PF13614	AAA domain
AM341_RS25575	PF02195	ParB-like nuclease domain
AM341_RS25585	PF06924	Protein of unknown function (DUF1281)
AM341_RS25595	PF01555	DNA methylase
AM341_RS25605	PF07128	AM341_RS25605
AM341_RS25620	PF03230	Antirestriction protein
AM341_RS25625	PF07128	AM341_RS25625
AM341_RS25650	PF12083	AM341_RS25650
AM341_RS25680	PF00436	Single-strand binding protein family
AM341_RS25685	PF06006	Bacterial protein of unknown function (DUF905)
AM341_RS25695	PF06290	Plasmid SOS inhibition protein (PsiB)
AM341_RS25700	PF06952	AM341_RS25700
AM341_RS25710	PF01848	AM341_RS25710
AM341_RS25730	PF06067	AM341_RS25730
AM341_RS25735	PF01464	Transglycosylase SLT domain
AM341_RS25740	PF05261	TraM protein, DNA-binding
AM341_RS25760	PF05509	AM341_RS25760
AM341_RS25765	PF05513	AM341_RS25765
AM341_RS25770	PF07178	AM341_RS25770
AM341_RS25775	PF05309	AM341_RS25775
AM341_RS25780	PF06586	AM341_RS25780
AM341_RS25785	PF03743	Bacterial conjugation TrbI-like protein
AM341_RS25790	PF07296	AM341_RS25790
AM341_RS25795	PF10894	AM341_RS25795
AM341_RS25805	PF09676	AM341_RS25805
AM341_RS25810	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AM341_RS25815	PF01935	Domain of unknown function DUF87
AM341_RS25815	PF11130	AM341_RS25815
AM341_RS25820	PF09677	AM341_RS25820
AM341_RS25825	PF12477	AM341_RS25825
AM341_RS25830	PF06834	AM341_RS25830
AM341_RS25835	PF09673	AM341_RS25835
AM341_RS25840	PF06986	AM341_RS25840
AM341_RS25845	PF11100	AM341_RS25845
AM341_RS25850	PF13728	F plasmid transfer operon protein
AM341_RS25865	PF01131	DNA topoisomerase
AM341_RS25865	PF01751	Toprim domain
AM341_RS25865	PF13342	AM341_RS25865
AM341_RS25870	PF05321	Haemolysin expression modulating protein
AM341_RS25875	PF00816	H-NS histone family
AM341_RS25885	PF00589	Phage integrase family
AM341_RS25890	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AM341_RS25915	PF10881	AM341_RS25915
AM341_RS25925	PF01051	Initiator Replication protein
AM341_RS25930	PF05973	AM341_RS25930
AM341_RS25940	PF00226	DnaJ domain
AM341_RS25980	PF07927	YcfA-like protein
AM341_RS25985	PF05534	AM341_RS25985
AM341_RS26000	PF03432	AM341_RS26000
AM341_RS26005	PF08281	Sigma-70, region 4
AM341_RS26015	PF01464	Transglycosylase SLT domain
AM341_RS26020	PF04956	AM341_RS26020
AM341_RS26025	PF03135	AM341_RS26025
AM341_RS26025	PF05101	AM341_RS26025
AM341_RS26030	PF07996	Type IV secretion system proteins
AM341_RS26035	PF04610	AM341_RS26035
AM341_RS26055	PF04335	VirB8 protein
AM341_RS26060	PF03524	Conjugal transfer protein
AM341_RS26065	PF03743	Bacterial conjugation TrbI-like protein
AM341_RS26070	PF00437	Type II/IV secretion system protein
AM341_RS26075	PF02534	Type IV secretory system Conjugative DNA transfer
AM341_RS26080	PF13117	AM341_RS26080
AM341_RS26085	PF07424	AM341_RS26085
AM341_RS26100	PF00565	Staphylococcal nuclease homologue