AM460_RS00035	SM00271	DnaJ molecular chaperone homology domain
AM460_RS00060	SM00852	Probable molybdopterin binding domain
AM460_RS00115	SM00448	cheY-homologous receiver domain
AM460_RS00115	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS00125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS00125	SM00387	Histidine kinase-like ATPases
AM460_RS00125	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS00130	SM00448	cheY-homologous receiver domain
AM460_RS00130	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS00140	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS00140	SM00871	Bacterial transcription activator, effector binding domain
AM460_RS00145	SM00855	Phosphoglycerate mutase family
AM460_RS00165	SM00382	ATPases associated with a variety of cellular activities
AM460_RS00170	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS00175	SM00382	ATPases associated with a variety of cellular activities
AM460_RS00210	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AM460_RS00215	SM01133	AM460_RS00215
AM460_RS00225	SM00857	Resolvase, N terminal domain
AM460_RS00415	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS00440	SM00382	ATPases associated with a variety of cellular activities
AM460_RS00520	SM00749	bacterial OsmY and nodulation domain
AM460_RS00575	SM00421	helix_turn_helix, Lux Regulon
AM460_RS00580	SM00421	helix_turn_helix, Lux Regulon
AM460_RS00600	SM00382	ATPases associated with a variety of cellular activities
AM460_RS00615	SM00829	Enoylreductase
AM460_RS00620	SM00895	AM460_RS00620
AM460_RS00630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM460_RS00630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS00630	SM00319	Homologues of the ligand binding domain of Tar
AM460_RS00650	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM460_RS00690	SM00487	DEAD-like helicases superfamily
AM460_RS00705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS00800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS00800	SM00895	AM460_RS00800
AM460_RS00920	SM00155	Phospholipase D. Active site motifs.
AM460_RS00940	SM00382	ATPases associated with a variety of cellular activities
AM460_RS01030	SM00869	Autotransporter beta-domain
AM460_RS01155	SM00965	Secretin and TonB N terminus short domain
AM460_RS01175	SM00382	ATPases associated with a variety of cellular activities
AM460_RS01250	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS01250	SM01134	AM460_RS01250
AM460_RS01320	SM00858	AM460_RS01320
AM460_RS01325	SM01130	AM460_RS01325
AM460_RS01330	SM00346	helix_turn_helix isocitrate lyase regulation
AM460_RS01380	SM00829	Enoylreductase
AM460_RS01450	SM00822	AM460_RS01450
AM460_RS01485	SM00831	Cation transporter/ATPase, N-terminus
AM460_RS01495	SM00354	helix_turn _helix lactose operon repressor
AM460_RS01505	SM00642	Alpha-amylase domain
AM460_RS01555	SM00382	ATPases associated with a variety of cellular activities
AM460_RS01575	SM00966	SpoVT / AbrB like domain 
AM460_RS01605	SM01091	Transporter associated domain
AM460_RS01690	SM00882	Coenzyme A transferase
AM460_RS01715	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS01750	SM01007	Class II Aldolase and Adducin N-terminal domain
AM460_RS01760	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM460_RS01785	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS01785	SM01134	AM460_RS01785
AM460_RS01850	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AM460_RS01855	SM00316	Ribosomal protein S1-like RNA-binding domain
AM460_RS01855	SM00357	Cold shock protein domain
AM460_RS01855	SM00955	AM460_RS01855
AM460_RS01865	SM00788	Adenylosuccinate synthetase
AM460_RS01875	SM00244	prohibitin homologues
AM460_RS01880	SM00244	prohibitin homologues
AM460_RS01900	SM00853	MutL C terminal dimerisation domain
AM460_RS01900	SM01340	AM460_RS01900
AM460_RS01905	SM00646	AM460_RS01905
AM460_RS01945	SM00479	AM460_RS01945
AM460_RS02025	SM00841	Elongation factor P, C-terminal
AM460_RS02025	SM01185	AM460_RS02025
AM460_RS02050	SM00883	Chaperonin 10 Kd subunit
AM460_RS02100	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS02145	SM00869	Autotransporter beta-domain
AM460_RS02155	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS02160	SM00869	Autotransporter beta-domain
AM460_RS02190	SM00091	PAS domain
AM460_RS02190	SM00387	Histidine kinase-like ATPases
AM460_RS02195	SM00448	cheY-homologous receiver domain
AM460_RS02230	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS02250	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS02265	SM00448	cheY-homologous receiver domain
AM460_RS02265	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS02270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS02270	SM00387	Histidine kinase-like ATPases
AM460_RS02270	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS02310	SM00382	ATPases associated with a variety of cellular activities
AM460_RS02325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS02325	SM00866	AM460_RS02325
AM460_RS02350	SM00382	ATPases associated with a variety of cellular activities
AM460_RS02355	SM00382	ATPases associated with a variety of cellular activities
AM460_RS02365	SM00072	Guanylate kinase homologues.
AM460_RS02405	SM00382	ATPases associated with a variety of cellular activities
AM460_RS02425	SM00849	Metallo-beta-lactamase superfamily
AM460_RS02470	SM00382	ATPases associated with a variety of cellular activities
AM460_RS02475	SM00382	ATPases associated with a variety of cellular activities
AM460_RS02480	SM00671	Sel1-like repeats.
AM460_RS02495	SM00028	Tetratricopeptide repeats
AM460_RS02595	SM00422	helix_turn_helix, mercury resistance
AM460_RS02600	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS02605	SM00052	Putative diguanylate phosphodiesterase
AM460_RS02645	SM00387	Histidine kinase-like ATPases
AM460_RS02650	SM00382	ATPases associated with a variety of cellular activities
AM460_RS02650	SM00448	cheY-homologous receiver domain
AM460_RS02665	SM00881	CoA binding domain
AM460_RS02685	SM00861	Transketolase, pyrimidine binding domain
AM460_RS02705	SM01005	Alanine racemase, C-terminal domain
AM460_RS02710	SM00382	ATPases associated with a variety of cellular activities
AM460_RS02715	SM00354	helix_turn _helix lactose operon repressor
AM460_RS02720	SM00882	Coenzyme A transferase
AM460_RS02740	SM00829	Enoylreductase
AM460_RS02780	SM00563	Phosphate acyltransferases
AM460_RS02810	SM00382	ATPases associated with a variety of cellular activities
AM460_RS02885	SM00363	S4 RNA-binding domain
AM460_RS02895	SM00822	AM460_RS02895
AM460_RS02945	SM01018	B12 binding domain
AM460_RS02950	SM00346	helix_turn_helix isocitrate lyase regulation
AM460_RS03010	SM00798	AICARFT/IMPCHase bienzyme
AM460_RS03010	SM00851	MGS-like domain
AM460_RS03015	SM01209	AM460_RS03015
AM460_RS03015	SM01210	AM460_RS03015
AM460_RS03020	SM00382	ATPases associated with a variety of cellular activities
AM460_RS03020	SM00448	cheY-homologous receiver domain
AM460_RS03025	SM00387	Histidine kinase-like ATPases
AM460_RS03025	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS03045	SM00411	bacterial (prokaryotic) histone like domain
AM460_RS03100	SM00876	Biotin and Thiamin Synthesis associated domain
AM460_RS03105	SM00663	RNA polymerase I subunit A N-terminus
AM460_RS03135	SM00649	Ribosomal protein L11/L12
AM460_RS03140	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM460_RS03140	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM460_RS03280	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM460_RS03300	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS03400	SM00487	DEAD-like helicases superfamily
AM460_RS03400	SM00490	helicase superfamily c-terminal domain
AM460_RS03405	SM00354	helix_turn _helix lactose operon repressor
AM460_RS03420	SM00382	ATPases associated with a variety of cellular activities
AM460_RS03420	SM01086	C-terminal, D2-small domain, of ClpB protein
AM460_RS03510	SM00448	cheY-homologous receiver domain
AM460_RS03510	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS03515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS03515	SM00387	Histidine kinase-like ATPases
AM460_RS03515	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS03545	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS03550	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS03565	SM01007	Class II Aldolase and Adducin N-terminal domain
AM460_RS03595	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM460_RS03655	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS03705	SM00829	Enoylreductase
AM460_RS03710	SM01133	AM460_RS03710
AM460_RS03725	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS03725	SM01134	AM460_RS03725
AM460_RS03740	SM01230	AM460_RS03740
AM460_RS03745	SM00091	PAS domain
AM460_RS03745	SM00387	Histidine kinase-like ATPases
AM460_RS03745	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS03750	SM00382	ATPases associated with a variety of cellular activities
AM460_RS03750	SM00448	cheY-homologous receiver domain
AM460_RS03760	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS03775	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AM460_RS03775	SM00474	3'-5' exonuclease
AM460_RS03775	SM00475	5'-3' exonuclease
AM460_RS03775	SM00482	DNA polymerase A domain
AM460_RS03785	SM00563	Phosphate acyltransferases
AM460_RS03880	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM460_RS03925	SM00346	helix_turn_helix isocitrate lyase regulation
AM460_RS04010	SM00861	Transketolase, pyrimidine binding domain
AM460_RS04065	SM00341	Helicase and RNase D C-terminal
AM460_RS04065	SM00487	DEAD-like helicases superfamily
AM460_RS04065	SM00490	helicase superfamily c-terminal domain
AM460_RS04065	SM00956	AM460_RS04065
AM460_RS04145	SM01219	AM460_RS04145
AM460_RS04260	SM00984	UDP binding domain
AM460_RS04280	SM00357	Cold shock protein domain
AM460_RS04280	SM00382	ATPases associated with a variety of cellular activities
AM460_RS04280	SM00959	Rho termination factor, N-terminal domain
AM460_RS04295	SM00487	DEAD-like helicases superfamily
AM460_RS04295	SM00490	helicase superfamily c-terminal domain
AM460_RS04370	SM00382	ATPases associated with a variety of cellular activities
AM460_RS04415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS04415	SM00895	AM460_RS04415
AM460_RS04425	SM00354	helix_turn _helix lactose operon repressor
AM460_RS04445	SM00382	ATPases associated with a variety of cellular activities
AM460_RS04460	SM00382	ATPases associated with a variety of cellular activities
AM460_RS04465	SM00327	von Willebrand factor (vWF) type A domain
AM460_RS04475	SM00344	helix_turn_helix ASNC type
AM460_RS04485	SM01228	AM460_RS04485
AM460_RS04530	SM00382	ATPases associated with a variety of cellular activities
AM460_RS04570	SM00382	ATPases associated with a variety of cellular activities
AM460_RS04675	SM01234	AM460_RS04675
AM460_RS04695	SM00382	ATPases associated with a variety of cellular activities
AM460_RS04695	SM00760	Bacterial dnaA protein helix-turn-helix domain
AM460_RS04700	SM00480	DNA polymerase III beta subunit
AM460_RS04710	SM00387	Histidine kinase-like ATPases
AM460_RS04710	SM00433	TopoisomeraseII
AM460_RS04730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS04730	SM00895	AM460_RS04730
AM460_RS04745	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM460_RS04785	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS04845	SM00421	helix_turn_helix, Lux Regulon
AM460_RS04845	SM00448	cheY-homologous receiver domain
AM460_RS04850	SM00387	Histidine kinase-like ATPases
AM460_RS04880	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS04990	SM00487	DEAD-like helicases superfamily
AM460_RS04990	SM00490	helicase superfamily c-terminal domain
AM460_RS05000	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM460_RS05000	SM00954	Region found in RelA / SpoT proteins
AM460_RS05005	SM01409	AM460_RS05005
AM460_RS05010	SM00072	Guanylate kinase homologues.
AM460_RS05015	SM00532	Ligase N family
AM460_RS05075	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM460_RS05075	SM01232	AM460_RS05075
AM460_RS05165	SM00829	Enoylreductase
AM460_RS05195	SM00450	Rhodanese Homology Domain
AM460_RS05215	SM00971	Serine acetyltransferase, N-terminal
AM460_RS05230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS05230	SM00895	AM460_RS05230
AM460_RS05330	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS05335	SM01007	Class II Aldolase and Adducin N-terminal domain
AM460_RS05345	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM460_RS05385	SM00346	helix_turn_helix isocitrate lyase regulation
AM460_RS05400	SM00642	Alpha-amylase domain
AM460_RS05405	SM00047	Lysozyme subfamily 2
AM460_RS05410	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS05420	SM00382	ATPases associated with a variety of cellular activities
AM460_RS05480	SM00357	Cold shock protein domain
AM460_RS05485	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS05565	SM00382	ATPases associated with a variety of cellular activities
AM460_RS05570	SM00382	ATPases associated with a variety of cellular activities
AM460_RS05655	SM00028	Tetratricopeptide repeats
AM460_RS05660	SM00052	Putative diguanylate phosphodiesterase
AM460_RS05660	SM00267	diguanylate cyclase
AM460_RS05695	SM00052	Putative diguanylate phosphodiesterase
AM460_RS05720	SM00421	helix_turn_helix, Lux Regulon
AM460_RS05730	SM01235	AM460_RS05730
AM460_RS05740	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS05745	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS05795	SM00382	ATPases associated with a variety of cellular activities
AM460_RS05815	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS05845	SM00421	helix_turn_helix, Lux Regulon
AM460_RS05950	SM00382	ATPases associated with a variety of cellular activities
AM460_RS05990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS05990	SM00866	AM460_RS05990
AM460_RS06000	SM00382	ATPases associated with a variety of cellular activities
AM460_RS06005	SM00382	ATPases associated with a variety of cellular activities
AM460_RS06080	SM00382	ATPases associated with a variety of cellular activities
AM460_RS06080	SM00962	SRP54-type protein, GTPase domain
AM460_RS06080	SM00963	SRP54-type protein, helical bundle domain
AM460_RS06085	SM00382	ATPases associated with a variety of cellular activities
AM460_RS06135	SM00382	ATPases associated with a variety of cellular activities
AM460_RS06140	SM00382	ATPases associated with a variety of cellular activities
AM460_RS06160	SM00382	ATPases associated with a variety of cellular activities
AM460_RS06200	SM00354	helix_turn _helix lactose operon repressor
AM460_RS06215	SM00487	DEAD-like helicases superfamily
AM460_RS06215	SM00490	helicase superfamily c-terminal domain
AM460_RS06230	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM460_RS06235	SM00642	Alpha-amylase domain
AM460_RS06240	SM00642	Alpha-amylase domain
AM460_RS06280	SM00450	Rhodanese Homology Domain
AM460_RS06290	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS06290	SM01134	AM460_RS06290
AM460_RS06305	SM00421	helix_turn_helix, Lux Regulon
AM460_RS06360	SM00899	AM460_RS06360
AM460_RS06370	SM00316	Ribosomal protein S1-like RNA-binding domain
AM460_RS06370	SM00732	Likely ribonuclease with RNase H fold.
AM460_RS06385	SM00448	cheY-homologous receiver domain
AM460_RS06385	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS06390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS06390	SM00387	Histidine kinase-like ATPases
AM460_RS06390	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS06425	SM00363	S4 RNA-binding domain
AM460_RS06470	SM00965	Secretin and TonB N terminus short domain
AM460_RS06615	SM00100	Cyclic nucleotide-monophosphate binding domain
AM460_RS06615	SM00419	helix_turn_helix, cAMP Regulatory protein
AM460_RS06645	SM00382	ATPases associated with a variety of cellular activities
AM460_RS06715	SM00838	Elongation factor G C-terminus
AM460_RS06715	SM00889	Elongation factor G, domain IV
AM460_RS06730	SM00495	Chitin-binding domain type 3
AM460_RS06790	SM00382	ATPases associated with a variety of cellular activities
AM460_RS06815	SM01403	AM460_RS06815
AM460_RS06835	SM01382	AM460_RS06835
AM460_RS06835	SM01383	AM460_RS06835
AM460_RS06850	SM00322	K homology RNA-binding domain
AM460_RS06870	SM01374	AM460_RS06870
AM460_RS06875	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AM460_RS06940	SM00363	S4 RNA-binding domain
AM460_RS06940	SM01390	AM460_RS06940
AM460_RS06945	SM00662	RNA polymerases D
AM460_RS06960	SM00422	helix_turn_helix, mercury resistance
AM460_RS07065	SM00382	ATPases associated with a variety of cellular activities
AM460_RS07080	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS07155	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS07155	SM01134	AM460_RS07155
AM460_RS07170	SM00382	ATPases associated with a variety of cellular activities
AM460_RS07190	SM00878	Biotin carboxylase C-terminal domain
AM460_RS07205	SM00829	Enoylreductase
AM460_RS07210	SM00052	Putative diguanylate phosphodiesterase
AM460_RS07210	SM00267	diguanylate cyclase
AM460_RS07245	SM00316	Ribosomal protein S1-like RNA-binding domain
AM460_RS07300	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM460_RS07305	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM460_RS07345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS07345	SM00895	AM460_RS07345
AM460_RS07350	SM01130	AM460_RS07350
AM460_RS07395	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS07400	SM00073	Histidine Phosphotransfer domain
AM460_RS07400	SM00091	PAS domain
AM460_RS07400	SM00387	Histidine kinase-like ATPases
AM460_RS07400	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS07400	SM00448	cheY-homologous receiver domain
AM460_RS07445	SM00382	ATPases associated with a variety of cellular activities
AM460_RS07475	SM00382	ATPases associated with a variety of cellular activities
AM460_RS07550	SM01103	AM460_RS07550
AM460_RS07560	SM00382	ATPases associated with a variety of cellular activities
AM460_RS07610	SM00316	Ribosomal protein S1-like RNA-binding domain
AM460_RS07630	SM01387	AM460_RS07630
AM460_RS07635	SM00316	Ribosomal protein S1-like RNA-binding domain
AM460_RS07635	SM00322	K homology RNA-binding domain
AM460_RS07640	SM00028	Tetratricopeptide repeats
AM460_RS07650	SM00487	DEAD-like helicases superfamily
AM460_RS07650	SM00490	helicase superfamily c-terminal domain
AM460_RS07685	SM00465	GIY-YIG type nucleases (URI domain)
AM460_RS07700	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM460_RS07710	SM00749	bacterial OsmY and nodulation domain
AM460_RS07800	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS07800	SM01134	AM460_RS07800
AM460_RS07815	SM00858	AM460_RS07815
AM460_RS07975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS07975	SM00895	AM460_RS07975
AM460_RS07990	SM00858	AM460_RS07990
AM460_RS08040	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS08070	SM01038	Beta galactosidase small chain
AM460_RS08075	SM00354	helix_turn _helix lactose operon repressor
AM460_RS08100	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM460_RS08100	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM460_RS08140	SM00400	zinc finger
AM460_RS08140	SM00493	AM460_RS08140
AM460_RS08140	SM00766	DNA primase DnaG DnaB-binding
AM460_RS08185	SM01207	AM460_RS08185
AM460_RS08190	SM00905	Dihydroneopterin aldolase
AM460_RS08205	SM00287	Bacterial SH3 domain homologues
AM460_RS08215	SM01118	AM460_RS08215
AM460_RS08240	SM00244	prohibitin homologues
AM460_RS08355	SM00387	Histidine kinase-like ATPases
AM460_RS08355	SM00433	TopoisomeraseII
AM460_RS08365	SM00382	ATPases associated with a variety of cellular activities
AM460_RS08410	SM00387	Histidine kinase-like ATPases
AM460_RS08410	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS08415	SM00448	cheY-homologous receiver domain
AM460_RS08415	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS08425	SM00871	Bacterial transcription activator, effector binding domain
AM460_RS08435	SM00434	DNA Topoisomerase IV
AM460_RS08440	SM00563	Phosphate acyltransferases
AM460_RS08480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS08480	SM00895	AM460_RS08480
AM460_RS08485	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS08510	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS08690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS08690	SM00895	AM460_RS08690
AM460_RS08760	SM00382	ATPases associated with a variety of cellular activities
AM460_RS08885	SM00869	Autotransporter beta-domain
AM460_RS08985	SM01130	AM460_RS08985
AM460_RS09020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS09020	SM00895	AM460_RS09020
AM460_RS09135	SM00869	Autotransporter beta-domain
AM460_RS09160	SM01006	Siderophore biosynthesis protein domain
AM460_RS09270	SM00028	Tetratricopeptide repeats
AM460_RS09315	SM00478	endonuclease III
AM460_RS09315	SM00525	AM460_RS09315
AM460_RS09340	SM00870	AM460_RS09340
AM460_RS09365	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS09375	SM01152	AM460_RS09375
AM460_RS09390	SM00382	ATPases associated with a variety of cellular activities
AM460_RS09395	SM00732	Likely ribonuclease with RNase H fold.
AM460_RS09420	SM00731	SprT homologues.
AM460_RS09470	SM00861	Transketolase, pyrimidine binding domain
AM460_RS09475	SM00244	prohibitin homologues
AM460_RS09515	SM00382	ATPases associated with a variety of cellular activities
AM460_RS09520	SM00382	ATPases associated with a variety of cellular activities
AM460_RS09545	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM460_RS09645	SM01011	Aminopeptidase P, N-terminal domain
AM460_RS09680	SM01022	AM460_RS09680
AM460_RS09780	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM460_RS09785	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AM460_RS09840	SM00091	PAS domain
AM460_RS09840	SM00382	ATPases associated with a variety of cellular activities
AM460_RS09850	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AM460_RS09855	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AM460_RS09865	SM00257	Lysin motif
AM460_RS09915	SM00354	helix_turn _helix lactose operon repressor
AM460_RS09920	SM00563	Phosphate acyltransferases
AM460_RS09945	SM00927	DNA mismatch repair enzyme MutH
AM460_RS09955	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM460_RS10015	SM00646	AM460_RS10015
AM460_RS10020	SM01061	CAT RNA binding domain
AM460_RS10095	SM00382	ATPases associated with a variety of cellular activities
AM460_RS10150	SM00382	ATPases associated with a variety of cellular activities
AM460_RS10150	SM01086	C-terminal, D2-small domain, of ClpB protein
AM460_RS10205	SM00925	MltA specific insert domain
AM460_RS10245	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS10245	SM01134	AM460_RS10245
AM460_RS10270	SM01007	Class II Aldolase and Adducin N-terminal domain
AM460_RS10280	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AM460_RS10280	SM00475	5'-3' exonuclease
AM460_RS10330	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM460_RS10335	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM460_RS10340	SM00073	Histidine Phosphotransfer domain
AM460_RS10340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS10340	SM00387	Histidine kinase-like ATPases
AM460_RS10340	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS10340	SM00448	cheY-homologous receiver domain
AM460_RS10350	SM00954	Region found in RelA / SpoT proteins
AM460_RS10365	SM01192	AM460_RS10365
AM460_RS10365	SM01193	AM460_RS10365
AM460_RS10385	SM00354	helix_turn _helix lactose operon repressor
AM460_RS10390	SM00640	Glycosyl hydrolases family 32
AM460_RS10435	SM00893	Electron transfer flavoprotein domain
AM460_RS10545	SM00257	Lysin motif
AM460_RS10560	SM00849	Metallo-beta-lactamase superfamily
AM460_RS10575	SM01007	Class II Aldolase and Adducin N-terminal domain
AM460_RS10590	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS10590	SM01134	AM460_RS10590
AM460_RS10600	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AM460_RS10600	SM00534	ATPase domain of DNA mismatch repair MUTS family
AM460_RS10615	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM460_RS10615	SM00382	ATPases associated with a variety of cellular activities
AM460_RS10690	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS10720	SM00849	Metallo-beta-lactamase superfamily
AM460_RS10725	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM460_RS10725	SM00382	ATPases associated with a variety of cellular activities
AM460_RS10735	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS10735	SM01134	AM460_RS10735
AM460_RS10780	SM00382	ATPases associated with a variety of cellular activities
AM460_RS10790	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM460_RS10865	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM460_RS10895	SM00382	ATPases associated with a variety of cellular activities
AM460_RS10940	SM00528	Domain in histone-like proteins of HNS family
AM460_RS10945	SM00450	Rhodanese Homology Domain
AM460_RS10950	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AM460_RS10960	SM00257	Lysin motif
AM460_RS10960	SM00749	bacterial OsmY and nodulation domain
AM460_RS10965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS10965	SM00895	AM460_RS10965
AM460_RS11105	SM01252	AM460_RS11105
AM460_RS11110	SM00507	HNH nucleases
AM460_RS11200	SM00635	Bacterial Ig-like domain 2
AM460_RS11230	SM00232	JAB/MPN domain
AM460_RS11240	SM00060	Fibronectin type 3 domain
AM460_RS11320	SM01091	Transporter associated domain
AM460_RS11330	SM00382	ATPases associated with a variety of cellular activities
AM460_RS11330	SM00962	SRP54-type protein, GTPase domain
AM460_RS11330	SM00963	SRP54-type protein, helical bundle domain
AM460_RS11360	SM00267	diguanylate cyclase
AM460_RS11380	SM00830	Chorismate mutase type II
AM460_RS11385	SM00830	Chorismate mutase type II
AM460_RS11410	SM00363	S4 RNA-binding domain
AM460_RS11420	SM00382	ATPases associated with a variety of cellular activities
AM460_RS11420	SM01086	C-terminal, D2-small domain, of ClpB protein
AM460_RS11460	SM00155	Phospholipase D. Active site motifs.
AM460_RS11465	SM00881	CoA binding domain
AM460_RS11470	SM01144	AM460_RS11470
AM460_RS11485	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AM460_RS11490	SM00986	Uracil DNA glycosylase superfamily
AM460_RS11490	SM00987	UreE urease accessory protein, C-terminal domain 
AM460_RS11510	SM00487	DEAD-like helicases superfamily
AM460_RS11510	SM00490	helicase superfamily c-terminal domain
AM460_RS11560	SM00358	Double-stranded RNA binding motif
AM460_RS11560	SM00535	Ribonuclease III family
AM460_RS11615	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS11625	SM01211	AM460_RS11625
AM460_RS11630	SM00387	Histidine kinase-like ATPases
AM460_RS11630	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS11640	SM00382	ATPases associated with a variety of cellular activities
AM460_RS11640	SM00448	cheY-homologous receiver domain
AM460_RS11645	SM00938	Nitrogen regulatory protein P-II
AM460_RS11665	SM00028	Tetratricopeptide repeats
AM460_RS11675	SM00382	ATPases associated with a variety of cellular activities
AM460_RS11685	SM00829	Enoylreductase
AM460_RS11760	SM00271	DnaJ molecular chaperone homology domain
AM460_RS11790	SM00450	Rhodanese Homology Domain
AM460_RS11795	SM01359	AM460_RS11795
AM460_RS11795	SM01360	AM460_RS11795
AM460_RS11805	SM00562	AM460_RS11805
AM460_RS11820	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS11840	SM00564	beta-propeller repeat
AM460_RS11875	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM460_RS11875	SM01240	AM460_RS11875
AM460_RS11910	SM00052	Putative diguanylate phosphodiesterase
AM460_RS11910	SM00267	diguanylate cyclase
AM460_RS11980	SM01130	AM460_RS11980
AM460_RS12035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS12035	SM00387	Histidine kinase-like ATPases
AM460_RS12060	SM00861	Transketolase, pyrimidine binding domain
AM460_RS12070	SM00919	Malic enzyme, NAD binding domain
AM460_RS12070	SM01274	AM460_RS12070
AM460_RS12075	SM00877	AM460_RS12075
AM460_RS12100	SM00877	AM460_RS12100
AM460_RS12145	SM00877	AM460_RS12145
AM460_RS12150	SM00877	AM460_RS12150
AM460_RS12155	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS12165	SM00646	AM460_RS12165
AM460_RS12200	SM00822	AM460_RS12200
AM460_RS12220	SM00382	ATPases associated with a variety of cellular activities
AM460_RS12265	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AM460_RS12270	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM460_RS12270	SM00292	breast cancer carboxy-terminal domain
AM460_RS12270	SM00532	Ligase N family
AM460_RS12360	SM00052	Putative diguanylate phosphodiesterase
AM460_RS12360	SM00267	diguanylate cyclase
AM460_RS12415	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS12420	SM00448	cheY-homologous receiver domain
AM460_RS12420	SM00850	LytTr DNA-binding domain
AM460_RS12425	SM00387	Histidine kinase-like ATPases
AM460_RS12485	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS12485	SM00073	Histidine Phosphotransfer domain
AM460_RS12485	SM00387	Histidine kinase-like ATPases
AM460_RS12485	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS12485	SM00448	cheY-homologous receiver domain
AM460_RS12490	SM00421	helix_turn_helix, Lux Regulon
AM460_RS12490	SM00448	cheY-homologous receiver domain
AM460_RS12570	SM00778	Zinc-binding domain of primase-helicase
AM460_RS12680	SM00463	Small MutS-related domain
AM460_RS12720	SM00825	Beta-ketoacyl synthase
AM460_RS12745	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM460_RS12790	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS12795	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS12810	SM00382	ATPases associated with a variety of cellular activities
AM460_RS12820	SM00905	Dihydroneopterin aldolase
AM460_RS12880	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM460_RS12920	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AM460_RS12925	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM460_RS12925	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AM460_RS12975	SM00327	von Willebrand factor (vWF) type A domain
AM460_RS12980	SM00849	Metallo-beta-lactamase superfamily
AM460_RS13015	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM460_RS13085	SM00346	helix_turn_helix isocitrate lyase regulation
AM460_RS13090	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM460_RS13160	SM00869	Autotransporter beta-domain
AM460_RS13170	SM00434	DNA Topoisomerase IV
AM460_RS13185	SM01359	AM460_RS13185
AM460_RS13185	SM01360	AM460_RS13185
AM460_RS13210	SM00882	Coenzyme A transferase
AM460_RS13215	SM00882	Coenzyme A transferase
AM460_RS13220	SM00382	ATPases associated with a variety of cellular activities
AM460_RS13220	SM00448	cheY-homologous receiver domain
AM460_RS13225	SM00091	PAS domain
AM460_RS13225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS13225	SM00387	Histidine kinase-like ATPases
AM460_RS13225	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS13230	SM00387	Histidine kinase-like ATPases
AM460_RS13230	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS13230	SM00448	cheY-homologous receiver domain
AM460_RS13235	SM00421	helix_turn_helix, Lux Regulon
AM460_RS13235	SM00448	cheY-homologous receiver domain
AM460_RS13240	SM00387	Histidine kinase-like ATPases
AM460_RS13265	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS13275	SM00382	ATPases associated with a variety of cellular activities
AM460_RS13305	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM460_RS13330	SM00382	ATPases associated with a variety of cellular activities
AM460_RS13370	SM00421	helix_turn_helix, Lux Regulon
AM460_RS13370	SM00448	cheY-homologous receiver domain
AM460_RS13410	SM00487	DEAD-like helicases superfamily
AM460_RS13410	SM00490	helicase superfamily c-terminal domain
AM460_RS13420	SM00363	S4 RNA-binding domain
AM460_RS13440	SM00382	ATPases associated with a variety of cellular activities
AM460_RS13460	SM00052	Putative diguanylate phosphodiesterase
AM460_RS13470	SM00014	Acid phosphatase homologues
AM460_RS13475	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AM460_RS13485	SM00841	Elongation factor P, C-terminal
AM460_RS13485	SM01185	AM460_RS13485
AM460_RS13530	SM00100	Cyclic nucleotide-monophosphate binding domain
AM460_RS13545	SM00518	AP endonuclease family 2
AM460_RS13610	SM00354	helix_turn _helix lactose operon repressor
AM460_RS13620	SM00382	ATPases associated with a variety of cellular activities
AM460_RS13715	SM01217	AM460_RS13715
AM460_RS13730	SM00382	ATPases associated with a variety of cellular activities
AM460_RS13745	SM00422	helix_turn_helix, mercury resistance
AM460_RS13750	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM460_RS13755	SM00448	cheY-homologous receiver domain
AM460_RS13755	SM00850	LytTr DNA-binding domain
AM460_RS13775	SM00327	von Willebrand factor (vWF) type A domain
AM460_RS13785	SM00382	ATPases associated with a variety of cellular activities
AM460_RS13800	SM00773	Proposed nucleic acid binding domain
AM460_RS13805	SM00773	Proposed nucleic acid binding domain
AM460_RS13875	SM00641	Glycosyl hydrolases family 25
AM460_RS13880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS13880	SM00866	AM460_RS13880
AM460_RS13900	SM01133	AM460_RS13900
AM460_RS13935	SM00829	Enoylreductase
AM460_RS13940	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS13940	SM01134	AM460_RS13940
AM460_RS13945	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AM460_RS13965	SM00448	cheY-homologous receiver domain
AM460_RS13965	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS13970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS13970	SM00387	Histidine kinase-like ATPases
AM460_RS13970	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS14005	SM00327	von Willebrand factor (vWF) type A domain
AM460_RS14025	SM00478	endonuclease III
AM460_RS14025	SM01009	AlkA N-terminal domain
AM460_RS14030	SM00052	Putative diguanylate phosphodiesterase
AM460_RS14030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM460_RS14030	SM00091	PAS domain
AM460_RS14030	SM00267	diguanylate cyclase
AM460_RS14050	SM01091	Transporter associated domain
AM460_RS14130	SM01350	AM460_RS14130
AM460_RS14135	SM00984	UDP binding domain
AM460_RS14235	SM01321	AM460_RS14235
AM460_RS14245	SM00479	AM460_RS14245
AM460_RS14250	SM00936	Penicillin-binding protein 5, C-terminal domain 
AM460_RS14255	SM00871	Bacterial transcription activator, effector binding domain
AM460_RS14350	SM00382	ATPases associated with a variety of cellular activities
AM460_RS14400	SM00382	ATPases associated with a variety of cellular activities
AM460_RS14440	SM00382	ATPases associated with a variety of cellular activities
AM460_RS14530	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS14565	SM00470	ParB-like nuclease domain
AM460_RS14675	SM00634	Bacterial Ig-like domain (group 1)
AM460_RS14710	SM00822	AM460_RS14710
AM460_RS14710	SM00823	Phosphopantetheine attachment site
AM460_RS14710	SM00824	Thioesterase
AM460_RS14710	SM00825	Beta-ketoacyl synthase
AM460_RS14710	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AM460_RS14715	SM00823	Phosphopantetheine attachment site
AM460_RS14720	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS14725	SM00382	ATPases associated with a variety of cellular activities
AM460_RS14730	SM00382	ATPases associated with a variety of cellular activities
AM460_RS14790	SM00095	Transthyretin
AM460_RS14795	SM00448	cheY-homologous receiver domain
AM460_RS14795	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS14800	SM00387	Histidine kinase-like ATPases
AM460_RS14800	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS14830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM460_RS14865	SM00267	diguanylate cyclase
AM460_RS14885	SM00421	helix_turn_helix, Lux Regulon
AM460_RS14935	SM00382	ATPases associated with a variety of cellular activities
AM460_RS14975	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS14980	SM01321	AM460_RS14980
AM460_RS15035	SM00642	Alpha-amylase domain
AM460_RS15070	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS15070	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM460_RS15085	SM00382	ATPases associated with a variety of cellular activities
AM460_RS15090	SM00421	helix_turn_helix, Lux Regulon
AM460_RS15100	SM00421	helix_turn_helix, Lux Regulon
AM460_RS15100	SM00448	cheY-homologous receiver domain
AM460_RS15105	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM460_RS15105	SM00465	GIY-YIG type nucleases (URI domain)
AM460_RS15165	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS15485	SM00382	ATPases associated with a variety of cellular activities
AM460_RS15530	SM00073	Histidine Phosphotransfer domain
AM460_RS15530	SM00260	Two component signalling adaptor domain
AM460_RS15530	SM00387	Histidine kinase-like ATPases
AM460_RS15530	SM01231	AM460_RS15530
AM460_RS15535	SM00260	Two component signalling adaptor domain
AM460_RS15540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AM460_RS15540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS15540	SM00319	Homologues of the ligand binding domain of Tar
AM460_RS15550	SM00138	Methyltransferase, chemotaxis proteins 
AM460_RS15555	SM00448	cheY-homologous receiver domain
AM460_RS15560	SM00448	cheY-homologous receiver domain
AM460_RS15585	SM00836	DALR anticodon binding domain
AM460_RS15585	SM01016	Arginyl tRNA synthetase N terminal dom
AM460_RS15670	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM460_RS15675	SM00382	ATPases associated with a variety of cellular activities
AM460_RS15690	SM00382	ATPases associated with a variety of cellular activities
AM460_RS15700	SM00257	Lysin motif
AM460_RS15760	SM00479	AM460_RS15760
AM460_RS15820	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM460_RS15825	SM00945	ProQ/FINO family
AM460_RS15830	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM460_RS15830	SM00245	tail specific protease
AM460_RS15845	SM00346	helix_turn_helix isocitrate lyase regulation
AM460_RS15875	SM00357	Cold shock protein domain
AM460_RS15925	SM01091	Transporter associated domain
AM460_RS15930	SM00052	Putative diguanylate phosphodiesterase
AM460_RS15985	SM00341	Helicase and RNase D C-terminal
AM460_RS15985	SM00474	3'-5' exonuclease
AM460_RS16025	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AM460_RS16025	SM00267	diguanylate cyclase
AM460_RS16045	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS16065	SM00267	diguanylate cyclase
AM460_RS16070	SM00267	diguanylate cyclase
AM460_RS16080	SM00763	PrkA AAA domain
AM460_RS16100	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM460_RS16125	SM00829	Enoylreductase
AM460_RS16145	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS16145	SM01134	AM460_RS16145
AM460_RS16160	SM00870	AM460_RS16160
AM460_RS16195	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM460_RS16195	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM460_RS16195	SM00493	AM460_RS16195
AM460_RS16200	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AM460_RS16220	SM00450	Rhodanese Homology Domain
AM460_RS16225	SM00382	ATPases associated with a variety of cellular activities
AM460_RS16305	SM00465	GIY-YIG type nucleases (URI domain)
AM460_RS16340	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS16355	SM01060	AM460_RS16355
AM460_RS16430	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AM460_RS16460	SM00873	B3/4 domain
AM460_RS16460	SM00874	tRNA synthetase B5 domain
AM460_RS16460	SM00896	Ferredoxin-fold anticodon binding domain
AM460_RS16465	SM00411	bacterial (prokaryotic) histone like domain
AM460_RS16480	SM00382	ATPases associated with a variety of cellular activities
AM460_RS16540	SM00893	Electron transfer flavoprotein domain
AM460_RS16545	SM00893	Electron transfer flavoprotein domain
AM460_RS16555	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS16565	SM00882	Coenzyme A transferase
AM460_RS16630	SM00382	ATPases associated with a variety of cellular activities
AM460_RS16650	SM00257	Lysin motif
AM460_RS16675	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
AM460_RS16760	SM00354	helix_turn _helix lactose operon repressor
AM460_RS16805	SM00479	AM460_RS16805
AM460_RS16855	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM460_RS16880	SM00363	S4 RNA-binding domain
AM460_RS16905	SM00478	endonuclease III
AM460_RS16905	SM00525	AM460_RS16905
AM460_RS16915	SM00900	AM460_RS16915
AM460_RS16980	SM00354	helix_turn _helix lactose operon repressor
AM460_RS17035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS17035	SM00387	Histidine kinase-like ATPases
AM460_RS17035	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS17040	SM00448	cheY-homologous receiver domain
AM460_RS17040	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS17070	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AM460_RS17070	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AM460_RS17165	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM460_RS17200	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM460_RS17225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS17225	SM00895	AM460_RS17225
AM460_RS17255	SM00267	diguanylate cyclase
AM460_RS17280	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS17285	SM00347	helix_turn_helix multiple antibiotic resistance protein
AM460_RS17330	SM00267	diguanylate cyclase
AM460_RS17360	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS17420	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS17475	SM00052	Putative diguanylate phosphodiesterase
AM460_RS17475	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AM460_RS17475	SM00091	PAS domain
AM460_RS17475	SM00267	diguanylate cyclase
AM460_RS17500	SM00919	Malic enzyme, NAD binding domain
AM460_RS17500	SM01274	AM460_RS17500
AM460_RS17505	SM00829	Enoylreductase
AM460_RS17515	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS17545	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM460_RS17575	SM00903	Flavin reductase like domain
AM460_RS17675	SM00382	ATPases associated with a variety of cellular activities
AM460_RS17685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS17705	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS17760	SM01150	AM460_RS17760
AM460_RS17790	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AM460_RS17805	SM00382	ATPases associated with a variety of cellular activities
AM460_RS17805	SM00487	DEAD-like helicases superfamily
AM460_RS17805	SM00490	helicase superfamily c-terminal domain
AM460_RS17805	SM00847	Helicase associated domain (HA2)  Add an annotation
AM460_RS17820	SM00710	Parallel beta-helix repeats
AM460_RS17865	SM00890	Domain of unknown function
AM460_RS17910	SM00487	DEAD-like helicases superfamily
AM460_RS17910	SM00490	helicase superfamily c-terminal domain
AM460_RS17925	SM00091	PAS domain
AM460_RS17925	SM00267	diguanylate cyclase
AM460_RS17930	SM00463	Small MutS-related domain
AM460_RS17945	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS17965	SM00100	Cyclic nucleotide-monophosphate binding domain
AM460_RS17965	SM00419	helix_turn_helix, cAMP Regulatory protein
AM460_RS18010	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AM460_RS18020	SM00091	PAS domain
AM460_RS18020	SM00382	ATPases associated with a variety of cellular activities
AM460_RS18035	SM00354	helix_turn _helix lactose operon repressor
AM460_RS18045	SM00382	ATPases associated with a variety of cellular activities
AM460_RS18090	SM00642	Alpha-amylase domain
AM460_RS18095	SM00450	Rhodanese Homology Domain
AM460_RS18120	SM00382	ATPases associated with a variety of cellular activities
AM460_RS18155	SM00382	ATPases associated with a variety of cellular activities
AM460_RS18160	SM00382	ATPases associated with a variety of cellular activities
AM460_RS18200	SM00357	Cold shock protein domain
AM460_RS18200	SM00955	AM460_RS18200
AM460_RS18210	SM00052	Putative diguanylate phosphodiesterase
AM460_RS18210	SM00091	PAS domain
AM460_RS18210	SM00267	diguanylate cyclase
AM460_RS18220	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS18220	SM01134	AM460_RS18220
AM460_RS18235	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AM460_RS18240	SM00028	Tetratricopeptide repeats
AM460_RS18250	SM00014	Acid phosphatase homologues
AM460_RS18290	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AM460_RS18290	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AM460_RS18290	SM00493	AM460_RS18290
AM460_RS18310	SM00822	AM460_RS18310
AM460_RS18330	SM00363	S4 RNA-binding domain
AM460_RS18345	SM00481	DNA polymerase alpha chain like domain
AM460_RS18450	SM00382	ATPases associated with a variety of cellular activities
AM460_RS18475	SM00232	JAB/MPN domain
AM460_RS18505	SM00409	Immunoglobulin
AM460_RS18660	SM00507	HNH nucleases
AM460_RS18715	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS18810	SM00155	Phospholipase D. Active site motifs.
AM460_RS18820	SM00382	ATPases associated with a variety of cellular activities
AM460_RS18825	SM00382	ATPases associated with a variety of cellular activities
AM460_RS18865	SM00528	Domain in histone-like proteins of HNS family
AM460_RS18875	SM00448	cheY-homologous receiver domain
AM460_RS18920	SM00849	Metallo-beta-lactamase superfamily
AM460_RS18950	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM460_RS18965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS18965	SM00387	Histidine kinase-like ATPases
AM460_RS18970	SM00421	helix_turn_helix, Lux Regulon
AM460_RS18970	SM00448	cheY-homologous receiver domain
AM460_RS19025	SM00937	AM460_RS19025
AM460_RS19050	SM01400	AM460_RS19050
AM460_RS19245	SM00091	PAS domain
AM460_RS19245	SM00382	ATPases associated with a variety of cellular activities
AM460_RS19255	SM01120	AM460_RS19255
AM460_RS19285	SM00382	ATPases associated with a variety of cellular activities
AM460_RS19330	SM01091	Transporter associated domain
AM460_RS19335	SM01005	Alanine racemase, C-terminal domain
AM460_RS19350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS19515	SM00052	Putative diguanylate phosphodiesterase
AM460_RS19515	SM01034	Sensors of blue-light using FAD
AM460_RS19520	SM00422	helix_turn_helix, mercury resistance
AM460_RS19565	SM00382	ATPases associated with a variety of cellular activities
AM460_RS19605	SM00232	JAB/MPN domain
AM460_RS19635	SM00635	Bacterial Ig-like domain 2
AM460_RS19780	SM00634	Bacterial Ig-like domain (group 1)
AM460_RS19805	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS19875	SM01329	AM460_RS19875
AM460_RS19905	SM00448	cheY-homologous receiver domain
AM460_RS19905	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS19910	SM00387	Histidine kinase-like ATPases
AM460_RS19915	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AM460_RS19930	SM00382	ATPases associated with a variety of cellular activities
AM460_RS19975	SM00382	ATPases associated with a variety of cellular activities
AM460_RS19990	SM00487	DEAD-like helicases superfamily
AM460_RS19990	SM00490	helicase superfamily c-terminal domain
AM460_RS19990	SM00982	AM460_RS19990
AM460_RS19990	SM01058	CarD-like/TRCF domain
AM460_RS19995	SM00257	Lysin motif
AM460_RS20090	SM00825	Beta-ketoacyl synthase
AM460_RS20100	SM00822	AM460_RS20100
AM460_RS20105	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AM460_RS20135	SM00363	S4 RNA-binding domain
AM460_RS20145	SM00316	Ribosomal protein S1-like RNA-binding domain
AM460_RS20160	SM00047	Lysozyme subfamily 2
AM460_RS20205	SM00858	AM460_RS20205
AM460_RS20285	SM00867	YceI-like domain 
AM460_RS20290	SM00450	Rhodanese Homology Domain
AM460_RS20340	SM00155	Phospholipase D. Active site motifs.
AM460_RS20345	SM00506	Appr-1"-p processing enzyme
AM460_RS20380	SM00421	helix_turn_helix, Lux Regulon
AM460_RS20410	SM00481	DNA polymerase alpha chain like domain
AM460_RS20425	SM00267	diguanylate cyclase
AM460_RS20430	SM00028	Tetratricopeptide repeats
AM460_RS20525	SM00903	Flavin reductase like domain
AM460_RS20560	SM00271	DnaJ molecular chaperone homology domain
AM460_RS20585	SM00448	cheY-homologous receiver domain
AM460_RS20585	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS20595	SM00073	Histidine Phosphotransfer domain
AM460_RS20595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS20595	SM00387	Histidine kinase-like ATPases
AM460_RS20595	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS20595	SM00448	cheY-homologous receiver domain
AM460_RS20620	SM00357	Cold shock protein domain
AM460_RS20625	SM00357	Cold shock protein domain
AM460_RS20700	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AM460_RS20705	SM00992	Hemimethylated DNA-binding protein YccV like
AM460_RS20710	SM00881	CoA binding domain
AM460_RS20720	SM00851	MGS-like domain
AM460_RS20795	SM00382	ATPases associated with a variety of cellular activities
AM460_RS20800	SM00981	AM460_RS20800
AM460_RS20830	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS20845	SM00382	ATPases associated with a variety of cellular activities
AM460_RS20880	SM00849	Metallo-beta-lactamase superfamily
AM460_RS20950	SM00382	ATPases associated with a variety of cellular activities
AM460_RS20955	SM00849	Metallo-beta-lactamase superfamily
AM460_RS20960	SM00411	bacterial (prokaryotic) histone like domain
AM460_RS20965	SM00316	Ribosomal protein S1-like RNA-binding domain
AM460_RS21035	SM00382	ATPases associated with a variety of cellular activities
AM460_RS21065	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS21255	SM00857	Resolvase, N terminal domain
AM460_RS21315	SM00382	ATPases associated with a variety of cellular activities
AM460_RS21470	SM01022	AM460_RS21470
AM460_RS21550	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AM460_RS21560	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS21770	SM00857	Resolvase, N terminal domain
AM460_RS21825	SM00382	ATPases associated with a variety of cellular activities
AM460_RS21835	SM00843	AM460_RS21835
AM460_RS21840	SM00344	helix_turn_helix ASNC type
AM460_RS21855	SM00382	ATPases associated with a variety of cellular activities
AM460_RS21860	SM00382	ATPases associated with a variety of cellular activities
AM460_RS21870	SM00316	Ribosomal protein S1-like RNA-binding domain
AM460_RS21880	SM00382	ATPases associated with a variety of cellular activities
AM460_RS21880	SM01086	C-terminal, D2-small domain, of ClpB protein
AM460_RS21890	SM00357	Cold shock protein domain
AM460_RS21895	SM00382	ATPases associated with a variety of cellular activities
AM460_RS21965	SM00644	AM460_RS21965
AM460_RS21980	SM00382	ATPases associated with a variety of cellular activities
AM460_RS21985	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS21985	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM460_RS22000	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS22000	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM460_RS22025	SM00382	ATPases associated with a variety of cellular activities
AM460_RS22100	SM00014	Acid phosphatase homologues
AM460_RS22105	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS22105	SM01134	AM460_RS22105
AM460_RS22110	SM00936	Penicillin-binding protein 5, C-terminal domain 
AM460_RS22130	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS22145	SM00267	diguanylate cyclase
AM460_RS22150	SM00052	Putative diguanylate phosphodiesterase
AM460_RS22170	SM00382	ATPases associated with a variety of cellular activities
AM460_RS22180	SM00852	Probable molybdopterin binding domain
AM460_RS22210	SM00382	ATPases associated with a variety of cellular activities
AM460_RS22225	SM00529	Helix-turn-helix diphteria tox regulatory element
AM460_RS22265	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS22265	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AM460_RS22275	SM00382	ATPases associated with a variety of cellular activities
AM460_RS22300	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AM460_RS22325	SM00487	DEAD-like helicases superfamily
AM460_RS22325	SM00488	AM460_RS22325
AM460_RS22325	SM00491	AM460_RS22325
AM460_RS22335	SM00487	DEAD-like helicases superfamily
AM460_RS22335	SM00490	helicase superfamily c-terminal domain
AM460_RS22350	SM00382	ATPases associated with a variety of cellular activities
AM460_RS22375	SM00155	Phospholipase D. Active site motifs.
AM460_RS22410	SM00852	Probable molybdopterin binding domain
AM460_RS22415	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS22425	SM00487	DEAD-like helicases superfamily
AM460_RS22425	SM00490	helicase superfamily c-terminal domain
AM460_RS22445	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS22445	SM00876	Biotin and Thiamin Synthesis associated domain
AM460_RS22495	SM00382	ATPases associated with a variety of cellular activities
AM460_RS22530	SM00382	ATPases associated with a variety of cellular activities
AM460_RS22555	SM00855	Phosphoglycerate mutase family
AM460_RS22685	SM00028	Tetratricopeptide repeats
AM460_RS22690	SM00872	Alpha mannosidase, middle domain
AM460_RS22700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS22700	SM00866	AM460_RS22700
AM460_RS22705	SM00881	CoA binding domain
AM460_RS22720	SM00861	Transketolase, pyrimidine binding domain
AM460_RS22780	SM00858	AM460_RS22780
AM460_RS22785	SM00822	AM460_RS22785
AM460_RS22790	SM00829	Enoylreductase
AM460_RS22800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS22800	SM00895	AM460_RS22800
AM460_RS22810	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AM460_RS22810	SM01232	AM460_RS22810
AM460_RS22820	SM00797	Allophanate hydrolase subunit 2
AM460_RS22825	SM00796	Allophanate hydrolase subunit 1
AM460_RS22875	SM00387	Histidine kinase-like ATPases
AM460_RS22875	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS22880	SM00448	cheY-homologous receiver domain
AM460_RS22880	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS22950	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS22950	SM01134	AM460_RS22950
AM460_RS22970	SM01130	AM460_RS22970
AM460_RS23080	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS23095	SM00116	Domain in cystathionine beta-synthase and other proteins.
AM460_RS23095	SM01091	Transporter associated domain
AM460_RS23110	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS23125	SM00382	ATPases associated with a variety of cellular activities
AM460_RS23150	SM00671	Sel1-like repeats.
AM460_RS23185	SM00855	Phosphoglycerate mutase family
AM460_RS23215	SM00936	Penicillin-binding protein 5, C-terminal domain 
AM460_RS23245	SM00729	Elongator protein 3, MiaB family, Radical SAM
AM460_RS23265	SM00357	Cold shock protein domain
AM460_RS23285	SM00448	cheY-homologous receiver domain
AM460_RS23290	SM00091	PAS domain
AM460_RS23290	SM00387	Histidine kinase-like ATPases
AM460_RS23295	SM00764	Citrate lyase ligase C-terminal domain
AM460_RS23375	SM00470	ParB-like nuclease domain
AM460_RS23415	SM00822	AM460_RS23415
AM460_RS23455	SM00382	ATPases associated with a variety of cellular activities
AM460_RS23470	SM00823	Phosphopantetheine attachment site
AM460_RS23470	SM00824	Thioesterase
AM460_RS23475	SM00923	MbtH-like protein
AM460_RS23495	SM00861	Transketolase, pyrimidine binding domain
AM460_RS23525	SM00382	ATPases associated with a variety of cellular activities
AM460_RS23620	SM00448	cheY-homologous receiver domain
AM460_RS23620	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS23625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AM460_RS23625	SM00387	Histidine kinase-like ATPases
AM460_RS23625	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS23635	SM00028	Tetratricopeptide repeats
AM460_RS23695	SM00840	AM460_RS23695
AM460_RS23720	SM01001	AIR carboxylase
AM460_RS23800	SM00346	helix_turn_helix isocitrate lyase regulation
AM460_RS23815	SM00450	Rhodanese Homology Domain
AM460_RS23845	SM00382	ATPases associated with a variety of cellular activities
AM460_RS23855	SM00822	AM460_RS23855
AM460_RS23870	SM00382	ATPases associated with a variety of cellular activities
AM460_RS23875	SM00244	prohibitin homologues
AM460_RS23890	SM00422	helix_turn_helix, mercury resistance
AM460_RS23910	SM00530	Helix-turn-helix XRE-family like proteins 
AM460_RS23990	SM00387	Histidine kinase-like ATPases
AM460_RS23995	SM00493	AM460_RS23995
AM460_RS24005	SM00382	ATPases associated with a variety of cellular activities
AM460_RS24070	SM01266	AM460_RS24070
AM460_RS24080	SM00052	Putative diguanylate phosphodiesterase
AM460_RS24115	SM00938	Nitrogen regulatory protein P-II
AM460_RS24120	SM00382	ATPases associated with a variety of cellular activities
AM460_RS24125	SM00382	ATPases associated with a variety of cellular activities
AM460_RS24130	SM00344	helix_turn_helix ASNC type
AM460_RS24155	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AM460_RS24165	SM00411	bacterial (prokaryotic) histone like domain
AM460_RS24170	SM00382	ATPases associated with a variety of cellular activities
AM460_RS24170	SM00464	Found in ATP-dependent protease La (LON)
AM460_RS24175	SM00382	ATPases associated with a variety of cellular activities
AM460_RS24175	SM00994	ClpX C4-type zinc finger
AM460_RS24175	SM01086	C-terminal, D2-small domain, of ClpB protein
AM460_RS24255	SM00981	AM460_RS24255
AM460_RS24270	SM00861	Transketolase, pyrimidine binding domain
AM460_RS24320	SM00507	HNH nucleases
AM460_RS24335	SM01323	AM460_RS24335
AM460_RS24355	SM00642	Alpha-amylase domain
AM460_RS24370	SM00091	PAS domain
AM460_RS24370	SM00387	Histidine kinase-like ATPases
AM460_RS24370	SM00388	His Kinase A (phosphoacceptor) domain
AM460_RS24375	SM00448	cheY-homologous receiver domain
AM460_RS24375	SM00862	Transcriptional regulatory protein, C terminal
AM460_RS24450	SM00267	diguanylate cyclase
AM460_RS24460	SM00098	Alkaline phosphatase homologues
AM460_RS24520	SM00869	Autotransporter beta-domain
AM460_RS24525	SM01004	Delta-aminolevulinic acid dehydratase
AM460_RS24540	SM00382	ATPases associated with a variety of cellular activities
AM460_RS24545	SM00062	Bacterial periplasmic substrate-binding proteins
AM460_RS24555	SM00829	Enoylreductase
AM460_RS24580	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AM460_RS24605	SM00346	helix_turn_helix isocitrate lyase regulation
AM460_RS24610	SM00354	helix_turn _helix lactose operon repressor
AM460_RS24620	SM01038	Beta galactosidase small chain
AM460_RS24630	SM01266	AM460_RS24630
AM460_RS24665	SM00382	ATPases associated with a variety of cellular activities
AM460_RS24685	SM00829	Enoylreductase
AM460_RS24715	SM00248	ankyrin repeats
AM460_RS24735	SM00052	Putative diguanylate phosphodiesterase
AM460_RS24735	SM00421	helix_turn_helix, Lux Regulon
AM460_RS24795	SM00421	helix_turn_helix, Lux Regulon
AM460_RS24810	SM00869	Autotransporter beta-domain
AM460_RS24845	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS24870	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS24870	SM00871	Bacterial transcription activator, effector binding domain
AM460_RS24880	SM00634	Bacterial Ig-like domain (group 1)
AM460_RS24950	SM00421	helix_turn_helix, Lux Regulon
AM460_RS25025	SM00487	DEAD-like helicases superfamily
AM460_RS25070	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AM460_RS25175	SM01321	AM460_RS25175
AM460_RS25225	SM00479	AM460_RS25225
AM460_RS25240	SM00849	Metallo-beta-lactamase superfamily
AM460_RS25245	SM00257	Lysin motif
AM460_RS25305	SM00382	ATPases associated with a variety of cellular activities
AM460_RS25305	SM00930	AM460_RS25305
AM460_RS25350	SM01322	AM460_RS25350
AM460_RS25365	SM00977	TilS substrate C-terminal domain
AM460_RS25385	SM00481	DNA polymerase alpha chain like domain
AM460_RS25415	SM00935	Outer membrane protein (OmpH-like)
AM460_RS25425	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM460_RS25475	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM460_RS25495	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AM460_RS25505	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AM460_RS25550	SM00382	ATPases associated with a variety of cellular activities
AM460_RS25585	SM00487	DEAD-like helicases superfamily
AM460_RS25585	SM00490	helicase superfamily c-terminal domain
AM460_RS25585	SM00847	Helicase associated domain (HA2)  Add an annotation
AM460_RS25700	SM00382	ATPases associated with a variety of cellular activities
AM460_RS25705	SM00947	Carbonic anhydrase
AM460_RS25715	SM00564	beta-propeller repeat
AM460_RS25780	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AM460_RS25780	SM00895	AM460_RS25780
AM460_RS25835	SM00644	AM460_RS25835
AM460_RS25865	SM01240	AM460_RS25865
AM460_RS25890	SM00957	SecA DEAD-like domain
AM460_RS25890	SM00958	SecA preprotein cross-linking domain
AM460_RS25905	SM00864	Tubulin/FtsZ family, GTPase domain
AM460_RS25905	SM00865	Tubulin/FtsZ family, C-terminal domain
AM460_RS25910	SM00842	Cell division protein FtsA
AM460_RS25985	SM00354	helix_turn _helix lactose operon repressor
AM460_RS26015	SM00917	LeuA allosteric (dimerisation) domain
AM460_RS26020	SM01329	AM460_RS26020
AM460_RS26055	SM00382	ATPases associated with a variety of cellular activities
AM460_RS26080	SM01130	AM460_RS26080
AM460_RS26085	SM00420	helix_turn_helix, Deoxyribose operon repressor
AM460_RS26090	SM00342	helix_turn_helix, arabinose operon control protein
AM460_RS26105	SM01007	Class II Aldolase and Adducin N-terminal domain
AM460_RS26110	SM00486	DNA polymerase type-B family
AM460_RS26115	SM00487	DEAD-like helicases superfamily
AM460_RS26115	SM00490	helicase superfamily c-terminal domain
AM460_RS26125	SM00271	DnaJ molecular chaperone homology domain
AM460_RS26145	SM00650	Ribosomal RNA adenine dimethylases
AM460_RS26200	SM00893	Electron transfer flavoprotein domain
AM460_RS26205	SM00893	Electron transfer flavoprotein domain
AM460_RS26250	SM00851	MGS-like domain
AM460_RS26250	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AM460_RS26255	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AM460_RS26300	SM00904	Riboflavin kinase
AM460_RS26335	SM00945	ProQ/FINO family
AM460_RS26410	SM00421	helix_turn_helix, Lux Regulon
AM460_RS26420	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AM460_RS26615	SM00493	AM460_RS26615
AM460_RS26810	SM00470	ParB-like nuclease domain
AM460_RS26825	SM00507	HNH nucleases
AM460_RS27155	SM00470	ParB-like nuclease domain
AM460_RS27300	SM00382	ATPases associated with a variety of cellular activities
AM460_RS27315	SM00857	Resolvase, N terminal domain
AM460_RS27395	SM00318	Staphylococcal nuclease homologues
AM460_RS27405	SM00945	ProQ/FINO family
AM460_RS27580	SM00470	ParB-like nuclease domain
AM460_RS27695	SM00470	ParB-like nuclease domain
AM460_RS27745	SM00487	DEAD-like helicases superfamily
AM460_RS27840	SM00382	ATPases associated with a variety of cellular activities
AM460_RS27985	SM00945	ProQ/FINO family
